|
| PDB code | NDB code | Method | BP number | Protein name |
|
| 1J9N | 1J9N | NMR | 6 |
|
| 1M0E | PD0327 | X-ray | 6 |
|
| 1RC7 | PR0107 | X-ray | 10 |
|
| 1G2D | PD0186 | X-ray | 15 |
|
| 1G2F | PD0187 | X-ray | 15 |
|
| 1SDS | PR0113 | X-ray | 15 |
|
| 1R9F | PR0106 | X-ray | 20 |
|
| 1S03 | PR0111 | X-ray | 47 |
|
| 1H9D | PD0210 | X-ray | 10 | AML1/CBF-BETA |
| 1F4S | 1F4S | NMR | 10 | AlcR |
| 1F5E | 1F5E | NMR | 10 | AlcR |
| 1HJC | PD0205 | X-ray | 15 | Aml1/Runx-1 Runt Cbfbeta |
| 1IO4 | PD0198 | X-ray | 25 | Aml1/Runx-1 Runt Cbfbeta |
| 1BDT | PD0035 | X-ray | 21 | Arc repressor bacteriophage P22 |
| 1BDV | PD0025 | X-ray | 21 | Arc repressor bacteriophage P22 |
| 1PAR | PDR012 | X-ray | 21 | Arc repressor bacteriophage P22 |
| 1EXI | PD0145 | X-ray | 21 | BmrR |
| 1EXJ | PD0146 | X-ray | 21 | BmrR |
| 1XBR | PDT045 | X-ray | 24 | Brachyury (T protein) |
| 1DC1 | PD0085 | X-ray | 11 | BsoBI |
| 1FOS | PDT014 | X-ray | 19 | C-FOS, C-JUN dimer |
| 1MDM | PD0338 | X-ray | 25 | C-ets-1 protein (p54); Paired box protein Pax-5 (B-cell |
| 1J59 | PD0299 | X-ray | 13 | CATABOLITE GENE ACTIVATOR PROTEIN (CAP) |
| 1Q2R | PR0101 | X-ray | 6 | CATALYTIC TRNA GUANINE TRANSGLYCOSYLASE |
| 1Q2S | PR0102 | X-ray | 6 | CATALYTIC TRNA GUANINE TRANSGLYCOSYLASE |
| 1NWQ | PD0395 | X-ray | 20 | CCAAT/enhancer binding protein alpha (C/EBP alpha) |
| 1KBU | PD0271 | X-ray | 16 | CRE RECOMBINASE |
| 1MA7 | PD0337 | X-ray | 16 | CRE SITE-SPECIFIC RECOMBINASE CRE RECOMBINASE, LOXP: LOWER STRAND, LOXP: UPPER STRAND HYDROLASE, LIGASE/DNA CRE-LOX SITE-SPECIFIC RECOMBINATION |
| 2CRX | PD0103 | X-ray | 17 | CRE recombinase |
| 3CRX | PD0104 | X-ray | 17 | CRE recombinase |
| 5CRX | PD0048 | X-ray | 32 | CRE recombinase |
| 4CRX | PD0047 | X-ray | 34 | CRE recombinase |
| 3CRO | PDR001 | X-ray | 19 | CRO protein |
| 6CRO | PDR053 | X-ray | 19 | CRO protein |
| 3ORC | PD0022 | X-ray | 8 | CRO, engineered monomer |
| 1O3Q | PD0398 | X-ray | 11 | Catabolite gene activator |
| 1O3R | PD0399 | X-ray | 11 | Catabolite gene activator |
| 1O3S | PD0400 | X-ray | 11 | Catabolite gene activator |
| 1O3T | PD0401 | X-ray | 13 | Catabolite gene activator |
| 1J1V | PD0371 | X-ray | 13 | Chromosomal replication initiator protein dnaA |
| 1B01 | PD0091 | X-ray | 10 | Copg repressor |
| 1J75 | PD0215 | X-ray | 6 | DLM-1 |
| 1HU0 | PD0195 | X-ray | 7 | DNA GLYCOSYLASE |
| 1E3M | PD0201 | X-ray | 17 | DNA Mismatch Repair Protein MutS |
| 1NKE | PD0385 | X-ray | 11 | DNA POLYMERASE I (ANALOGOUS TO THE E. COLI KLENOW FRAGMENT) |
| 1L3S | PD0300 | X-ray | 9 | DNA POLYMERASE I KLENOW FRAGMENT |
| 1L3T | PD0301 | X-ray | 10 | DNA POLYMERASE I KLENOW FRAGMENT |
| 1LV5 | PD0317 | X-ray | 10 | DNA POLYMERASE I KLENOW FRAGMENT |
| 1L3U | PD0302 | X-ray | 11 | DNA POLYMERASE I KLENOW FRAGMENT |
| 1L5U | PD0304 | X-ray | 12 | DNA POLYMERASE I KLENOW FRAGMENT |
| 1L3V | PD0303 | X-ray | 15 | DNA POLYMERASE I KLENOW FRAGMENT |
| 1CLQ | PD0079 | X-ray | 9 | DNA Polymerase |
| 1HUZ | PD0197 | X-ray | 8 | DNA Polymerase Beta |
| 1IXY | PD0333 | X-ray | 6 | DNA beta-glucosyltransferase (EC 2.4.1.27) (BGT) |
| 1M5R | PD0334 | X-ray | 6 | DNA beta-glucosyltransferase (EC 2.4.1.27) (BGT) |
| 1BBX | 1BBX | NMR | 12 | DNA binding protein 7 (Sso7d) |
| 1BP7 | PD0026 | X-ray | 24 | DNA endonuclease I-CREI |
| 1N3E | PD0360 | X-ray | 10 | DNA endonuclease I-CreI (EC 3.1.-.-) (23S rRNA intron protein) |
| 1N3F | PD0361 | X-ray | 10 | DNA endonuclease I-CreI (EC 3.1.-.-) (23S rRNA intron protein) |
| 1NNE | PD0388 | X-ray | 11 | DNA mismatch repair protein mutS |
| 1NG9 | PD0367 | X-ray | 17 | DNA mismatch repair protein mutS |
| 1KLN | PDE004 | X-ray | 9 | DNA polymerase I (Klenow fragment) |
| 1TAU | PDE024 | X-ray | 8 | DNA polymerase I (TAQ) |
| 2KTQ | PD0030 | X-ray | 12 | DNA polymerase I (TAQ) |
| 3KTQ | PD0032 | X-ray | 12 | DNA polymerase I (TAQ) |
| 4KTQ | PD0033 | X-ray | 12 | DNA polymerase I (TAQ) |
| 1QSS | PD0066 | X-ray | 12 | DNA polymerase I (TAQ, Klenow fragment) |
| 1QSY | PD0065 | X-ray | 12 | DNA polymerase I (TAQ, Klenow fragment) |
| 1QTM | PD0067 | X-ray | 12 | DNA polymerase I (TAQ, Klenow fragment) |
| 1NK6 | PD0379 | X-ray | 8 | DNA polymerase I (analogous to the E. coli Klenow fragment) |
| 1NK4 | PD0377 | X-ray | 9 | DNA polymerase I (analogous to the E. coli Klenow fragment) |
| 1NK7 | PD0380 | X-ray | 9 | DNA polymerase I (analogous to the E. coli Klenow fragment) |
| 1NJZ | PD0375 | X-ray | 10 | DNA polymerase I (analogous to the E. coli Klenow fragment) |
| 1NJW | PD0372 | X-ray | 11 | DNA polymerase I (analogous to the E. coli Klenow fragment) |
| 1NJX | PD0373 | X-ray | 11 | DNA polymerase I (analogous to the E. coli Klenow fragment) |
| 1NJY | PD0374 | X-ray | 11 | DNA polymerase I (analogous to the E. coli Klenow fragment) |
| 1NK0 | PD0376 | X-ray | 11 | DNA polymerase I (analogous to the E. coli Klenow fragment) |
| 1NK8 | PD0381 | X-ray | 11 | DNA polymerase I (analogous to the E. coli Klenow fragment) |
| 1NK9 | PD0382 | X-ray | 12 | DNA polymerase I (analogous to the E. coli Klenow fragment) |
| 1NK5 | PD0378 | X-ray | 13 | DNA polymerase I (analogous to the E. coli Klenow fragment) |
| 1NKB | PD0383 | X-ray | 13 | DNA polymerase I (analogous to the E. coli Klenow fragment) |
| 1NKC | PD0384 | X-ray | 15 | DNA polymerase I (analogous to the E. coli Klenow fragment) |
| 2BDP | PDE0131 | X-ray | 9 | DNA polymerase I (thermophilus) |
| 3BDP | PDE0132 | X-ray | 10 | DNA polymerase I (thermophilus) |
| 4BDP | PDE0133 | X-ray | 11 | DNA polymerase I (thermophilus) |
| 1JXL | PD0252 | X-ray | 12 | DNA polymerase IV (Dpo4) |
| 1JX4 | PD0251 | X-ray | 13 | DNA polymerase IV (Dpo4) |
| 1T7P | PDE0135 | X-ray | 11 | DNA polymerase bacteriophage T7 |
| 7ICE | PDE047 | X-ray | 6 | DNA polymerase beta |
| 7ICF | PDE048 | X-ray | 6 | DNA polymerase beta |
| 7ICG | PDE049 | X-ray | 6 | DNA polymerase beta |
| 7ICH | PDE050 | X-ray | 6 | DNA polymerase beta |
| 7ICI | PDE051 | X-ray | 6 | DNA polymerase beta |
| 7ICJ | PDE052 | X-ray | 6 | DNA polymerase beta |
| 7ICK | PDE053 | X-ray | 6 | DNA polymerase beta |
| 9ICK | PDE0100 | X-ray | 6 | DNA polymerase beta |
| 7ICL | PDE054 | X-ray | 6 | DNA polymerase beta |
| 9ICL | PDE0101 | X-ray | 6 | DNA polymerase beta |
| 7ICM | PDE055 | X-ray | 6 | DNA polymerase beta |
| 9ICM | PDE0102 | X-ray | 6 | DNA polymerase beta |
| 7ICN | PDE056 | X-ray | 6 | DNA polymerase beta |
| 9ICN | PDE0103 | X-ray | 6 | DNA polymerase beta |
| 7ICO | PDE057 | X-ray | 6 | DNA polymerase beta |
| 9ICO | PDE0104 | X-ray | 6 | DNA polymerase beta |
| 7ICP | PDE058 | X-ray | 6 | DNA polymerase beta |
| 9ICP | PDE0105 | X-ray | 6 | DNA polymerase beta |
| 7ICQ | PDE059 | X-ray | 6 | DNA polymerase beta |
| 9ICQ | PDE0106 | X-ray | 6 | DNA polymerase beta |
| 7ICR | PDE060 | X-ray | 6 | DNA polymerase beta |
| 9ICR | PDE0107 | X-ray | 6 | DNA polymerase beta |
| 7ICS | PDE061 | X-ray | 6 | DNA polymerase beta |
| 9ICS | PDE0108 | X-ray | 6 | DNA polymerase beta |
| 7ICT | PDE062 | X-ray | 6 | DNA polymerase beta |
| 9ICT | PDE0109 | X-ray | 6 | DNA polymerase beta |
| 7ICU | PDE063 | X-ray | 6 | DNA polymerase beta |
| 9ICU | PDE0110 | X-ray | 6 | DNA polymerase beta |
| 7ICV | PDE088 | X-ray | 6 | DNA polymerase beta |
| 9ICW | PDE0112 | X-ray | 6 | DNA polymerase beta |
| 9ICX | PDE0113 | X-ray | 6 | DNA polymerase beta |
| 2BPF | PDE011 | X-ray | 7 | DNA polymerase beta |
| 2BPG | PDE012 | X-ray | 7 | DNA polymerase beta |
| 8ICA | PDE089 | X-ray | 7 | DNA polymerase beta |
| 9ICA | PDE091 | X-ray | 7 | DNA polymerase beta |
| 8ICB | PDE064 | X-ray | 7 | DNA polymerase beta |
| 9ICB | PDE092 | X-ray | 7 | DNA polymerase beta |
| 8ICC | PDE065 | X-ray | 7 | DNA polymerase beta |
| 9ICC | PDE093 | X-ray | 7 | DNA polymerase beta |
| 8ICE | PDE066 | X-ray | 7 | DNA polymerase beta |
| 9ICE | PDE094 | X-ray | 7 | DNA polymerase beta |
| 8ICF | PDE067 | X-ray | 7 | DNA polymerase beta |
| 9ICF | PDE095 | X-ray | 7 | DNA polymerase beta |
| 8ICG | PDE068 | X-ray | 7 | DNA polymerase beta |
| 9ICG | PDE096 | X-ray | 7 | DNA polymerase beta |
| 8ICH | PDE069 | X-ray | 7 | DNA polymerase beta |
| 9ICH | PDE097 | X-ray | 7 | DNA polymerase beta |
| 8ICI | PDE070 | X-ray | 7 | DNA polymerase beta |
| 9ICI | PDE098 | X-ray | 7 | DNA polymerase beta |
| 8ICJ | PDE071 | X-ray | 7 | DNA polymerase beta |
| 9ICJ | PDE099 | X-ray | 7 | DNA polymerase beta |
| 8ICK | PDE072 | X-ray | 7 | DNA polymerase beta |
| 8ICL | PDE073 | X-ray | 7 | DNA polymerase beta |
| 8ICM | PDE074 | X-ray | 7 | DNA polymerase beta |
| 8ICN | PDE075 | X-ray | 7 | DNA polymerase beta |
| 8ICO | PDE076 | X-ray | 7 | DNA polymerase beta |
| 8ICP | PDE077 | X-ray | 7 | DNA polymerase beta |
| 8ICQ | PDE078 | X-ray | 7 | DNA polymerase beta |
| 8ICR | PDE079 | X-ray | 7 | DNA polymerase beta |
| 8ICS | PDE080 | X-ray | 7 | DNA polymerase beta |
| 8ICT | PDE081 | X-ray | 7 | DNA polymerase beta |
| 8ICU | PDE082 | X-ray | 7 | DNA polymerase beta |
| 8ICV | PDE083 | X-ray | 7 | DNA polymerase beta |
| 9ICV | PDE0111 | X-ray | 7 | DNA polymerase beta |
| 8ICW | PDE084 | X-ray | 7 | DNA polymerase beta |
| 8ICX | PDE085 | X-ray | 7 | DNA polymerase beta |
| 8ICY | PDE086 | X-ray | 7 | DNA polymerase beta |
| 9ICY | PDE0114 | X-ray | 7 | DNA polymerase beta |
| 8ICZ | PDE087 | X-ray | 7 | DNA polymerase beta |
| 1ZQA | PDE027 | X-ray | 7 | DNA polymerase beta |
| 1ZQB | PDE028 | X-ray | 7 | DNA polymerase beta |
| 1ZQC | PDE029 | X-ray | 7 | DNA polymerase beta |
| 1ZQD | PDE030 | X-ray | 7 | DNA polymerase beta |
| 1ZQE | PDE031 | X-ray | 7 | DNA polymerase beta |
| 1ZQF | PDE032 | X-ray | 7 | DNA polymerase beta |
| 1ZQG | PDE033 | X-ray | 7 | DNA polymerase beta |
| 1ZQH | PDE034 | X-ray | 7 | DNA polymerase beta |
| 1ZQI | PDE035 | X-ray | 7 | DNA polymerase beta |
| 1ZQJ | PDE036 | X-ray | 7 | DNA polymerase beta |
| 1ZQK | PDE037 | X-ray | 7 | DNA polymerase beta |
| 1ZQL | PDE038 | X-ray | 7 | DNA polymerase beta |
| 1ZQM | PDE039 | X-ray | 7 | DNA polymerase beta |
| 1ZQN | PDE040 | X-ray | 7 | DNA polymerase beta |
| 1ZQO | PDE041 | X-ray | 7 | DNA polymerase beta |
| 1ZQP | PDE042 | X-ray | 7 | DNA polymerase beta |
| 1ZQQ | PDE043 | X-ray | 7 | DNA polymerase beta |
| 1ZQR | PDE044 | X-ray | 7 | DNA polymerase beta |
| 1ZQS | PDE045 | X-ray | 7 | DNA polymerase beta |
| 1ZQT | PDE046 | X-ray | 7 | DNA polymerase beta |
| 1BPX | PDE0126 | X-ray | 10 | DNA polymerase beta |
| 1BPY | PDE0125 | X-ray | 10 | DNA polymerase beta |
| 1BPZ | PDE0124 | X-ray | 16 | DNA polymerase beta |
| 1MQ2 | PD0343 | X-ray | 10 | DNA polymerase beta (EC 2.7.7.7) |
| 1MQ3 | PD0344 | X-ray | 10 | DNA polymerase beta (EC 2.7.7.7) |
| 1K4S | PD0255 | X-ray | 10 | DNA topoisomerase I (EC 5.99.1.2) |
| 1K4T | PD0256 | X-ray | 10 | DNA topoisomerase I (EC 5.99.1.2) |
| 1NH3 | PD0370 | X-ray | 12 | DNA topoisomerase I (EC 5.99.1.2) |
| 1LPQ | PD0313 | X-ray | 22 | DNA topoisomerase I (EC 5.99.1.2) |
| 1P51 | PD0426 | X-ray | 6 | DNA-binding protein HU |
| 1P71 | PD0430 | X-ray | 7 | DNA-binding protein HU |
| 1P78 | PD0431 | X-ray | 7 | DNA-binding protein HU |
| 1MSW | PD0345 | X-ray | 6 | DNA-directed RNA polymerase (EC 2.7.7.6) |
| 1DNK | PDE005 | X-ray | 7 | DNase I |
| 2DNJ | PDE006 | X-ray | 14 | DNase I |
| 1KQQ | 1KQQ | NMR | 15 | Dead Ringer Protein |
| 1JJ4 | PD0227 | X-ray | 16 | E2 |
| 2BOP | PDV001 | X-ray | 16 | E2 (papillomavirus-1) |
| 1CF7 | PD0045 | X-ray | 15 | E2F-4/DP-2 heterodimer |
| 1DUX | PD0116 | X-ray | 13 | ELK1 |
| 2STT | 2STT | NMR | 17 | ETS1 |
| 2STW | 2STW | NMR | 17 | ETS1 |
| 1P47 | PD0424 | X-ray | 21 | Early growth response protein 1 (EGR-1) (Krox-24 protein) (ZIF268) (Nerve growth factor-induced protein A) (NGFI-A) |
| 1LLM | PD0312 | X-ray | 12 | Early growth response protein 1 (EGR-1) (Krox-24 protein) (ZIF268) (Nerve growth factor-induced protein A) (NGFI-A) General control protein GCN4 (Amino acid biosynthesis regulatory protein) |
| 1LWS | PD0319 | X-ray | 34 | Endonuclease PI-SceI |
| 1LWT | PD0320 | X-ray | 36 | Endonuclease PI-SceI |
| 1K3W | PD0253 | X-ray | 18 | Endonuclease VIII (EC 3.2.-.-) |
| 1B3T | PD0024 | X-ray | 18 | Epstein-Barr virus origin-binding protein (EBNA 1) |
| 1K7A | PD0261 | X-ray | 13 | Ets-1 |
| 1K79 | PD0260 | X-ray | 14 | Ets-1 |
| 1HW2 | PD0199 | X-ray | 18 | FADR |
| 1FLO | PD0178 | X-ray | 12 | FLP recombinase |
| 1M6X | PD0336 | X-ray | 12 | FLPE-HOLLIDAY JUNCTION COMPLEX |
| 1KFV | PD0277 | X-ray | 6 | FORMAMIDO- PYRIMIDINE DNA GLYCOSYLASE |
| 1K82 | PD0264 | X-ray | 6 | FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE |
| 1H9T | PD0232 | X-ray | 19 | FadR |
| 1NNJ | PD0389 | X-ray | 7 | Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) (FAPY-DNA glycosylase) |
| 1AWC | PDT048 | X-ray | 20 | GA binding protein alpha/beta |
| 1YUI | 1YUI | NMR | 11 | GAGA binding factor |
| 1YUJ | 1YUJ | NMR | 11 | GAGA binding factor |
| 1D66 | PDT003 | X-ray | 19 | GAL4 |
| 1GCC | 1GCC | NMR | 11 | GCC box binding protein ATERF1 |
| 1YSA | PDT002 | X-ray | 16 | GCN4 |
| 1DGC | PDT007 | X-ray | 18 | GCN4 |
| 2DGC | PDT029 | X-ray | 18 | GCN4 |
| 2GLI | PDT008 | X-ray | 20 | GLI |
| 1JFI | PD0221 | X-ray | 17 | H2A/H2B, Tbp |
| 1JJ6 | PD0228 | X-ray | 12 | HIN recombinase |
| 1JJ8 | PD0229 | X-ray | 12 | HIN recombinase |
| 1JKO | PD0234 | X-ray | 12 | HIN recombinase |
| 1HCR | PDE009 | X-ray | 13 | HIN recombinase |
| 2HMI | PD0005 | X-ray | 18 | HIV reverse transcriptase |
| 1RTD | PD0023 | X-ray | 21 | HIV reverse transcriptase |
| 1QRV | PD0110 | X-ray | 9 | HMG-D |
| 2EZD | 2EZD | NMR | 12 | HMG-I(Y) |
| 2EZE | 2EZE | NMR | 12 | HMG-I(Y) |
| 2EZF | 2EZF | NMR | 12 | HMG-I(Y) |
| 2EZG | 2EZG | NMR | 12 | HMG-I(Y) |
| 1CKT | PD0051 | X-ray | 16 | HMG1 domain A |
| 1M5X | PD0335 | X-ray | 51 | HOMING ENDONUCLEASE I-MSOI |
| 1B72 | PD0075 | X-ray | 19 | HOXB1-PBX1 heterodimer |
| 1QP9 | PD0148 | X-ray | 20 | Hap1-Pc7 |
| 1IC8 | PD0208 | X-ray | 21 | Hepatocyte nuclear factor 1-alpha |
| 1IJW | PD0213 | X-ray | 11 | Hin Recombinase |
| 1JKP | PD0235 | X-ray | 12 | Hin Recombinase |
| 1JKQ | PD0236 | X-ray | 12 | Hin Recombinase |
| 1JKR | PD0237 | X-ray | 12 | Hin Recombinase |
| 1KC6 | PD0272 | X-ray | 12 | HincII |
| 1KX3 | PD0285 | X-ray | 146 | Histone H2A.1, H2B.1, H3 (H3.2), H4 |
| 1KX4 | PD0286 | X-ray | 146 | Histone H2A.1, H2B.1, H3 (H3.2), H4 |
| 1KX5 | PD0287 | X-ray | 147 | Histone H2A.1, H2B.1, H3 (H3.2), H4 |
| 1M18 | PD0328 | X-ray | 146 | Histone H2A.1, H2B.1, H3.2, H4 |
| 1M19 | PD0329 | X-ray | 146 | Histone H2A.1, H2B.1, H3.2, H4 |
| 1M1A | PD0330 | X-ray | 146 | Histone H2A.1, H2B.1, H3.2, H4 |
| 1PUF | PD0455 | X-ray | 19 | Homeobox Protein Hox-A9; Pre-B-Cell Leukemia Transcription Factor-1; |
| 1G9Z | PD0190 | X-ray | 10 | Homing Endonuclease I-CreI |
| 1G9Y | PD0189 | X-ray | 24 | Homing Endonuclease I-CreI |
| 1MOW | PD0342 | X-ray | 22 | Homing endonuclease I-DmoI (EC 3.1.-.-) DNA endonuclease I-CreI (EC 3.1.-.-) (23S rRNA intron protein) |
| 1I3J | PD0200 | X-ray | 20 | INTRON ENDONUCLEASE I-TEVI |
| 1KSX | PD0282 | X-ray | 18 | Initiator Protein |
| 1KSY | PD0283 | X-ray | 21 | Initiator Protein |
| 1P7D | PD0428 | X-ray | 13 | Integrase |
| 1OWG | PD0407 | X-ray | 20 | Integration host factor |
| 1JEY | PD0220 | X-ray | 14 | Ku heterodimer (Ku70 and Ku80 subunits) |
| 1EVW | PD0140 | X-ray | 8 | L116A MUTANT OF THE HOMING ENDONUCLEASE I-PPOI |
| 1JWL | PD0250 | X-ray | 14 | Lac Repressor |
| 1OSL | 1OSL | NMR | 18 | Lactose operon repressor |
| 1L1M | 1L1M | NMR | 23 | Lactose operon repressor |
| 1NLW | PD0387 | X-ray | 18 | MAD-MAX |
| 1BL0 | PDR056 | X-ray | 22 | MARA |
| 1LE8 | PD0308 | X-ray | 19 | MAT (Mating type) A1/MATALPHA2-3A HETERODIMER |
| 1EGW | PD0121 | X-ray | 16 | MEF2A |
| 1C7U | 1C7U | NMR | 20 | MEF2A |
| 1D1U | PD0152 | X-ray | 6 | MMLV reverse transcriptase |
| 1D0E | PD0135 | X-ray | 8 | MMLV reverse transcriptase |
| 1QAI | PD0126 | X-ray | 8 | MMLV reverse transcriptase |
| 1QAJ | PD0134 | X-ray | 8 | MMLV reverse transcriptase |
| 1OUZ | PD0405 | X-ray | 20 | MUTANT IHF (BETAE44A) INTEGRATION HOST FACTOR ALPHA-SUBUNIT |
| 1OWF | PD0406 | X-ray | 20 | MUTANT IHF (BETAE44A) INTEGRATION HOST FACTOR ALPHA-SUBUNIT |
| 1L1T | PD0292 | X-ray | 6 | MUTM (FPG) BOUND TO ABASIC-SITE CONTAINING DNA MUTM |
| 1L1Z | PD0293 | X-ray | 6 | MUTM (FPG) COVALENT-DNA INTERMEDIATE MUTM |
| 1L2B | PD0294 | X-ray | 6 | MUTM (FPG) DNA END-PRODUCT STRUCTURE MUTM |
| 1L2D | PD0296 | X-ray | 6 | MUTM (FPG)-DNA ESTRANGED GUANINE MISMATCH RECOGNITION COMPLEX MUTM |
| 1L2C | PD0295 | X-ray | 6 | MUTM (FPG)-DNA ESTRANGED THYMINE MISMATCH RECOGNITION COMPLEX MUTM |
| 1NKP | PD0386 | X-ray | 18 | MYC-MAX |
| 1HLV | PD0192 | X-ray | 21 | Major Centromere Autoantigen B |
| 1K61 | PD0257 | X-ray | 20 | Mating-type protein alpha-2 (Alpha-2 repressor) |
| 1HLO | PDT042 | X-ray | 11 | Max |
| 1AN2 | PDT023 | X-ray | 22 | Max |
| 1N35 | PR0087 | X-ray | 6 | Minor core protein lambda 3 |
| 1IG7 | PD0211 | X-ray | 13 | Msx-1 Homeodomain |
| 1G4D | 1G4D | NMR | 16 | Mu Repressor |
| 1MDY | PDT016 | X-ray | 14 | MyoD |
| 1LWV | PD0321 | X-ray | 7 | N-glycosylase/DNA lyase |
| 1LWW | PD0322 | X-ray | 7 | N-glycosylase/DNA lyase |
| 1LWY | PD0323 | X-ray | 7 | N-glycosylase/DNA lyase |
| 1N39 | PD0357 | X-ray | 7 | N-glycosylase/DNA lyase |
| 1N3A | PD0355 | X-ray | 7 | N-glycosylase/DNA lyase |
| 1N3C | PD0356 | X-ray | 7 | N-glycosylase/DNA lyase |
| 1A02 | PDT050 | X-ray | 18 | NF-AT/C-FOS/C-JUN |
| 1A66 | 1A66 | NMR | 12 | NF-ATc1 |
| 1LE5 | PD0307 | X-ray | 11 | NF-KB |
| 1LE9 | PD0309 | X-ray | 11 | NF-KB |
| 1LEI | PD0310 | X-ray | 16 | NF-KB |
| 1CIT | PD0046 | X-ray | 16 | NGFI-B orphan nuclear receptor |
| 1P34 | PD0413 | X-ray | 146 | NUCLEOSOME CORE PARTICLES CONTAINING HISTONE 'SIN' MUTANTS HISTONE H2B, HISTONE H3, HISTONE H2A, HISTONE H4 |
| 1P3A | PD0414 | X-ray | 146 | NUCLEOSOME CORE PARTICLES CONTAINING HISTONE 'SIN' MUTANTS HISTONE H2B, HISTONE H3, HISTONE H2A, HISTONE H4 |
| 1P3B | PD0415 | X-ray | 146 | NUCLEOSOME CORE PARTICLES CONTAINING HISTONE 'SIN' MUTANTS HISTONE H2B, HISTONE H3, HISTONE H2A, HISTONE H4 |
| 1P3F | PD0416 | X-ray | 146 | NUCLEOSOME CORE PARTICLES CONTAINING HISTONE 'SIN' MUTANTS HISTONE H2B, HISTONE H3, HISTONE H2A, HISTONE H4 |
| 1P3G | PD0417 | X-ray | 146 | NUCLEOSOME CORE PARTICLES CONTAINING HISTONE 'SIN' MUTANTS HISTONE H2B, HISTONE H3, HISTONE H2A, HISTONE H4 |
| 1P3I | PD0418 | X-ray | 146 | NUCLEOSOME CORE PARTICLES CONTAINING HISTONE 'SIN' MUTANTS HISTONE H2B, HISTONE H3, HISTONE H2A, HISTONE H4 |
| 1P3K | PD0419 | X-ray | 146 | NUCLEOSOME CORE PARTICLES CONTAINING HISTONE 'SIN' MUTANTS HISTONE H2B, HISTONE H3, HISTONE H2A, HISTONE H4 |
| 1P3L | PD0420 | X-ray | 146 | NUCLEOSOME CORE PARTICLES CONTAINING HISTONE 'SIN' MUTANTS HISTONE H2B, HISTONE H3, HISTONE H2A, HISTONE H4 |
| 1P3M | PD0421 | X-ray | 146 | NUCLEOSOME CORE PARTICLES CONTAINING HISTONE 'SIN' MUTANTS HISTONE H2B, HISTONE H3, HISTONE H2A, HISTONE H4 |
| 1P3O | PD0422 | X-ray | 146 | NUCLEOSOME CORE PARTICLES CONTAINING HISTONE 'SIN' MUTANTS HISTONE H2B, HISTONE H3, HISTONE H2A, HISTONE H4 |
| 1P3P | PD0423 | X-ray | 146 | NUCLEOSOME CORE PARTICLES CONTAINING HISTONE 'SIN' MUTANTS HISTONE H2B, HISTONE H3, HISTONE H2A, HISTONE H4 |
| 1IAW | PD0207 | X-ray | 16 | NaeI |
| 1FIU | PD0177 | X-ray | 10 | NgoMIV |
| 1JE8 | PD0219 | X-ray | 20 | Nitrate/nitrite response regulator protein narL |
| 1J5N | 1J5N | NMR | 15 | Nonhistone chromosomal protein 6A |
| 1ID3 | PD0209 | X-ray | 146 | Nucleosome Core Particle |
| 1F66 | PD0171 | X-ray | 146 | Nucleosome Core Particle Histone H2A |
| 1CQT | PD0092 | X-ray | 14 | OCA-B PEPTIDE, OCT-1 POU domain |
| 1HF0 | PD0274 | X-ray | 22 | OCT-1 |
| 1OCT | PDT019 | X-ray | 14 | OCT-1 POU domain |
| 1E3O | PD0225 | X-ray | 11 | Oct-1 |
| 1OUP | PD0403 | X-ray | 8 | PERIPLASMIC ENDONUCLEASE VVN |
| 1AU7 | PDR034 | X-ray | 24 | PIT-1 POU domain |
| 1N5Y | PD0365 | X-ray | 20 | POL polyprotein [Contains: Protease (Retropepsin) (EC 3.4.23.16); Reverse transcriptase (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4)] |
| 1N6Q | PD0364 | X-ray | 20 | POL polyprotein [Contains: Protease (Retropepsin) (EC 3.4.23.16); Reverse transcriptase (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4)] |
| 1PUE | PDT033 | X-ray | 15 | PU.1 |
| 1ZME | PDT044 | X-ray | 16 | PUT3 |
| 1K78 | PD0259 | X-ray | 25 | Pax5; Ets-1 |
| 1IG9 | PD0212 | X-ray | 13 | Pol alpha |
| 1HUO | PD0196 | X-ray | 7 | Polymerase Beta |
| 1LFU | 1LFU | NMR | 14 | Pre-B-cell leukemia transcription factor-1 (Homeobox protein PBX1) |
| 1JFS | PD0223 | X-ray | 16 | Purine Repressor |
| 1JFT | PD0224 | X-ray | 16 | Purine Repressor |
| 1JH9 | PD0226 | X-ray | 16 | Purine Repressor |
| 1F0O | PD0149 | X-ray | 11 | PvuII Endonuclease |
| 1JT0 | PD0249 | X-ray | 28 | QacR |
| 1L3L | PD0298 | X-ray | 20 | Quorum-Sensing Transcription Factor |
| 1IGN | PDT035 | X-ray | 18 | RAP1 |
| 1REP | PD0107 | X-ray | 21 | REPE54 |
| 1EA4 | PD0479 | X-ray | 20 | REPRESSOR COPG |
| 1J5O | PD0316 | X-ray | 18 | REVERSE TRANSCRIPTASE |
| 1DP7 | PD0111 | X-ray | 16 | RFX-DBD |
| 1I6H | PH0004 | X-ray | 9 | RNA POLYMERASE II ELONGATION COMPLEX |
| 1LB2 | PD0306 | X-ray | 20 | RNA POLYMERASE IN COMPLEX WITH CAP |
| 1KU7 | PD0284 | X-ray | 10 | RNA Polymerase Sigma Subunit |
| 1CEZ | PD0086 | X-ray | 13 | RNA polymerase bacteriophage T7 |
| 1QLN | PH0002 | X-ray | 13 | RNA polymerase bacteriophage T7 |
| 1HJB | PD0204 | X-ray | 25 | RUNX-1/AML1/CBFALPHA RUNT DOMAIN AND C/EBPBETA BZIP HOMODIMER |
| 1BY4 | PD0071 | X-ray | 15 | RXR, Hormone Response Element |
| 1GM5 | PD0267 | X-ray | 9 | RecG |
| 1OUQ | PD0404 | X-ray | 21 | Recombinase CRE |
| 1NZB | PD0392 | X-ray | 36 | Recombinase CRE |
| 1P4E | PD0425 | X-ray | 12 | Recombinase FLP protein (Protein Able) |
| 1CW0 | PD0100 | X-ray | 12 | Repair (VSR) Endonuclease |
| 1F4K | PD0167 | X-ray | 21 | Replication terminator protein |
| 1DMU | PD0108 | X-ray | 17 | Restriction Endonuclease BglI |
| 1D2I | PD0153 | X-ray | 14 | Restriction Endonuclease BglII |
| 1DFM | PD0101 | X-ray | 14 | Restriction Endonuclease BglII |
| 1D02 | PD0151 | X-ray | 10 | Restriction Endonuclease Mun I |
| 1A6Y | PD0008 | X-ray | 20 | RevErbA orphan nuclear receptor |
| 1GA5 | PD0191 | X-ray | 20 | Reverb Response Element |
| 1HLZ | PD0193 | X-ray | 20 | Reverb Response Element |
| 1I6J | PD0202 | X-ray | 6 | Reverse Transcriptase |
| 1N4L | PD0359 | X-ray | 16 | Reverse transcriptase (EC 2.7.7.49) |
| 1D5Y | PD0078 | X-ray | 20 | Rob Transcription Factor |
| 1BC8 | PD0020 | X-ray | 9 | SAP-1 ETS DOMAIN |
| 1BC7 | PD0027 | X-ray | 11 | SAP-1 ETS DOMAIN |
| 1K6O | PD0258 | X-ray | 23 | SAP-1/SRF/C-FOS SRE COMPLEX |
| 1MHD | PD0243 | X-ray | 13 | SMAD3 MH1 domain |
| 1LQ1 | PD0314 | X-ray | 15 | SPORULATION PROTEIN A: Spo0A |
| 1MNN | PD0341 | X-ray | 13 | SPORULATION SPECIFIC TRANSCRIPTION FACTOR NDT80 |
| 1BF5 | PDR052 | X-ray | 17 | STAT-1 |
| 1BG1 | PD0028 | X-ray | 17 | STAT-3 beta |
| 1IU3 | PD0297 | X-ray | 9 | SeqA |
| 1LRR | PD0315 | X-ray | 12 | SeqA protein |
| 1HBX | PD0233 | X-ray | 25 | Serum Response Factor; Ets-Domain Protein Elk-4 |
| 1SKN | PDT064 | X-ray | 13 | Skn-1 |
| 1C8C | PD0143 | X-ray | 8 | Sso7d/Sac7d |
| 1LO1 | 1LO1 | NMR | 13 | Steroid hormone receptor ERR2 (Estrogen-related receptor, beta) |
| 1NH2 | PD0369 | X-ray | 16 | TATA-box binding protein (TATA-box factor) (TATA binding factor) (TATA sequence-binding protein) (TBP) (Transcription factor D) (Transcription initiation factor TFIID TBP subunit) large chain (TFIIA 32 kDa subunit) small chain (TFIIA 13.5 kDa subunit) |
| 1TGH | PDT024 | X-ray | 12 | TBP |
| 1YTB | PDT012 | X-ray | 12 | TBP |
| | PDT009 | X-ray | 14 | TBP |
| | PDT025 | X-ray | 14 | TBP |
| 1QN3 | PD0164 | X-ray | 14 | TBP |
| 1QN4 | PD0154 | X-ray | 14 | TBP |
| 1QN5 | PD0155 | X-ray | 14 | TBP |
| 1QN6 | PD0156 | X-ray | 14 | TBP |
| 1QN7 | PD0157 | X-ray | 14 | TBP |
| 1QN8 | PD0158 | X-ray | 14 | TBP |
| 1QN9 | PD0159 | X-ray | 14 | TBP |
| 1QNA | PD0160 | X-ray | 14 | TBP |
| 1QNB | PD0161 | X-ray | 14 | TBP |
| 1QNC | PD0162 | X-ray | 14 | TBP |
| 1QNE | PD0163 | X-ray | 14 | TBP |
| 1CDW | PDT034 | X-ray | 16 | TBP |
| 1YTF | PDT036 | X-ray | 16 | TBP/TFIIA |
| 1VOL | PDT032 | X-ray | 16 | TBP/TFIIB |
| 1AIS | PDR031 | X-ray | 17 | TBP/TFIIB |
| 1C9B | PD0112 | X-ray | 17 | TBP/TFIIB |
| 1D3U | PD0070 | X-ray | 23 | TBP/TFIIB |
| 1H6F | PD0311 | X-ray | 22 | TBX3 |
| 1TC3 | PDE0128 | X-ray | 19 | TC3A1-65 |
| 1TF3 | 1TF3 | NMR | 15 | TFIIIA |
| 1TF6 | PDT065 | X-ray | 30 | TFIIIA |
| 1MM8 | PD0340 | X-ray | 18 | TN5 TRANSPOSASE |
| 1MUH | PD0347 | X-ray | 18 | TN5 TRANSPOSASE |
| 1MUS | PD0350 | X-ray | 18 | TN5 TRANSPOSASE |
| 1IV6 | 1IV6 | NMR | 13 | TRF1 |
| 1EWQ | PD0142 | X-ray | 21 | Taq MutS |
| 1IMH | PD0214 | X-ray | 13 | Tonicity-responsive enhancer binding protein (TonEBP), also known as NFAT5 |
| 1JNM | PD0241 | X-ray | 20 | Transcription factor AP-1 (Activator protein 1) (Proto-oncogene c-jun) |
| 1NGM | PD0368 | X-ray | 19 | Transcription initiation factor TFIID (TATA-box factor) (TATA sequence-binding protein) (TBP) (Transcription factor D) Transcription factor IIIB 70 kDa subunit (TFIIIB) (B-related factor) (BRF) |
| 1CO0 | 1CO0 | NMR | 20 | Trp operon repressor |
| 1KB2 | PD0268 | X-ray | 18 | VDR (vitamin D receptor) DNA-BINDING DOMAIN |
| 1KB4 | PD0269 | X-ray | 18 | VDR (vitamin D receptor) DNA-BINDING DOMAIN |
| 1KB6 | PD0270 | X-ray | 18 | VDR (vitamin D receptor) DNA-BINDING DOMAIN |
| 1N56 | PD0362 | X-ray | 12 | Y-FAMILY DNA POLYMERASE DPO4, DNA POLYMERASE IV |
| 1A1F | PDT055 | X-ray | 10 | ZIF268 |
| 1A1G | PDT056 | X-ray | 10 | ZIF268 |
| 1A1H | PDT057 | X-ray | 10 | ZIF268 |
| 1A1I | PDT059 | X-ray | 10 | ZIF268 |
| 1A1J | PDT060 | X-ray | 10 | ZIF268 |
| 1A1K | PDT058 | X-ray | 10 | ZIF268 |
| 1A1L | PDT061 | X-ray | 10 | ZIF268 |
| 1AAY | PDT039 | X-ray | 10 | ZIF268 |
| 1ZAA | PDT006 | X-ray | 10 | ZIF268 |
| 1JK1 | PD0230 | X-ray | 10 | Zif268 |
| 1JK2 | PD0231 | X-ray | 10 | Zif268 |
| 1F2I | PD0165 | X-ray | 14 | Zif268 |
| 2DA8 | 2DA8 | NMR | 6 | [N-ME CYS==3==, N-ME CYS==7==]TANDEM |
| 1FJA | 1FJA | NMR | 6 | actinomycin |
| 1DSC | 1DSC | NMR | 8 | actinomycin |
| 1DSD | 1DSD | NMR | 8 | actinomycin |
| 1AHD | 1AHD | NMR | 14 | antennapedia protein |
| 9ANT | PD0007 | X-ray | 14 | antennapedia protein |
| 4GAT | 4GAT | NMR | 13 | area |
| 5GAT | 5GAT | NMR | 13 | area |
| 6GAT | 6GAT | NMR | 13 | area |
| 7GAT | 7GAT | NMR | 13 | area |
| 1DH3 | PD0102 | X-ray | 20 | bZIP |
| 1GD2 | PD0180 | X-ray | 12 | bzip transcription factor PAP1PAP1 |
| 1H88 | PD0288 | X-ray | 25 | c-Myb-C/EBPbeta |
| 1H89 | PD0289 | X-ray | 25 | c-Myb-C/EBPbeta |
| 1GJI | PD0222 | X-ray | 20 | c-Rel |
| 2CGP | PDT049 | X-ray | 26 | catabolite gene activator protein (CAP) |
| 1CGP | PDR006 | X-ray | 30 | catabolite gene activator protein (CAP) |
| 1RUN | PDR024 | X-ray | 30 | catabolite gene activator protein (CAP) |
| 1RUO | PDR025 | X-ray | 30 | catabolite gene activator protein (CAP) |
| 1F44 | PD0166 | X-ray | 15 | cre |
| 1DRG | PD0113 | X-ray | 15 | cre recombinase |
| 1MEY | PDTB41 | X-ray | 24 | designed zinc finger |
| 1C0W | PD0069 | X-ray | 21 | diphtheria toxin repressor (DtxR) |
| 1DDN | PD0004 | X-ray | 32 | diphtheria toxin repressor (DtxR) |
| 1F5T | PD0170 | X-ray | 41 | diphtheria toxin repressor (DtxR) |
| 1DI2 | PR0020 | X-ray | 10 | dsRNA-Binding Domain |
| 1DU0 | PD0114 | X-ray | 20 | engrailed |
| 1HDD | PDT004 | X-ray | 20 | engrailed |
| 2HDD | PDT043 | X-ray | 20 | engrailed |
| 3HDD | PD0016 | X-ray | 20 | engrailed |
| 1GAT | 1GAT | NMR | 8 | erythroid transcription factor GATA-1 |
| 1GAU | 1GAU | NMR | 8 | erythroid transcription factor GATA-1 |
| 2GAT | 2GAT | NMR | 16 | erythroid transcription factor GATA-1 |
| 3GAT | 3GAT | NMR | 16 | erythroid transcription factor GATA-1 |
| 1HCQ | PDRC03 | X-ray | 17 | estrogen receptor |
| 1GDT | PDE0115 | X-ray | 34 | gamma-delta resolvase |
| 1GLU | PDRC01 | X-ray | 18 | glucocorticoid receptor |
| 1LAT | PDT030 | X-ray | 18 | glucocorticoid receptor |
| 3HTS | PD0073 | X-ray | 12 | heat shock transcription factor |
| 1FYL | PD0183 | X-ray | 12 | heat-shock transcription factor (HSF) |
| 1FYM | PD0184 | X-ray | 12 | heat-shock transcription factor (HSF) |
| 2HAP | PD0090 | X-ray | 19 | heme activator protein |
| 1HWT | PD0089 | X-ray | 20 | heme activator protein |
| 2HDC | 2HDC | NMR | 17 | hepatocyte nuclear factor-3 forkhead homolog 2 (HFH-2) |
| | PDT013 | X-ray | 13 | hepatocyte nuclear factor-3 gamma (HNF-3) |
| 1J46 | 1J46 | NMR | 14 | human male sex-determining factor SRY, hSRY(HMG) |
| 1J47 | 1J47 | NMR | 14 | human male sex-determining factor SRY, hSRY(HMG) |
| 1AZP | PDR047 | X-ray | 8 | hyperthermophile chromosomal protein SAC7D |
| 1AZQ | PDR048 | X-ray | 8 | hyperthermophile chromosomal protein SAC7D |
| 1BF4 | PD0088 | X-ray | 8 | hyperthermophile chromosomal protein SSO7D |
| 1BNZ | PD0012 | X-ray | 8 | hyperthermophile chromosomal protein SSO7D |
| 1CA5 | PD0119 | X-ray | 8 | hyperthermophile chromosomal protein SSO7D/SAC7D |
| 1CA6 | PD0120 | X-ray | 8 | hyperthermophile chromosomal protein SSO7D/SAC7D |
| 1B69 | 1B69 | NMR | 13 | integrase |
| 1TN9 | 1TN9 | NMR | 13 | integrase |
| 1IHF | PDT040 | X-ray | 34 | integration host factor |
| 1IF1 | PDR035 | X-ray | 13 | interferon regulatory factor 1 (IRF-1) |
| 2IRF | PD0076 | X-ray | 36 | interferon regulatory factor 2 (IRF-2) |
| 1A73 | PD0002 | X-ray | 20 | intron-encoded endonuclease I PpoI |
| 1A74 | PDE140 | X-ray | 20 | intron-encoded endonuclease I PpoI |
| 1CYQ | PD0096 | X-ray | 20 | intron-encoded endonuclease I PpoI |
| 1CZ0 | PD0097 | X-ray | 20 | intron-encoded endonuclease I PpoI |
| 1IPP | PDE0144 | X-ray | 20 | intron-encoded endonuclease I PpoI |
| 1LCC | 1LCC | NMR | 11 | lactose operon repressor |
| 1LCD | 1LCD | NMR | 11 | lactose operon repressor |
| 1LBG | PDR026 | X-ray | 16 | lactose operon repressor |
| 1EFA | PD0118 | X-ray | 17 | lactose operon repressor |
| 1CJG | 1CJG | NMR | 22 | lactose operon repressor |
| 2LEF | 2LEF | NMR | 15 | lymphoid enhancer-binding factor 1 (LEF1) |
| 1YRN | PDT028 | X-ray | 18 | mating type A1/alpha2 |
| 1AKH | PDR049 | X-ray | 19 | mating type A1/alpha2 |
| 1APL | PDT005 | X-ray | 20 | mating type alpha2 |
| 1MNM | PDR036 | X-ray | 25 | mating type alpha2/MCM1 |
| 1MJP | PD0247 | X-ray | 9 | methionine repressor |
| 1MJM | PD0245 | X-ray | 10 | methionine repressor |
| 1CMA | PDR008 | X-ray | 18 | methionine repressor |
| 1MJ2 | PD0173 | X-ray | 18 | methionine repressor |
| 1MJO | PD0246 | X-ray | 18 | methionine repressor |
| 1MJQ | PD0248 | X-ray | 18 | methionine repressor |
| 1IG4 | 1IG4 | NMR | 12 | methylation-dependent transcriptional regulator MBD1 |
| 1NFK | PDT015 | X-ray | 10 | nuclear factor kappa-B P50 homodimer |
| 1SVC | PDT022 | X-ray | 10 | nuclear factor kappa-B P50 homodimer |
| 1VKX | PDR033 | X-ray | 11 | nuclear factor kappa-B P50/P65 heterodimer |
| 1A3Q | PDR032 | X-ray | 11 | nuclear factor kappa-B P52 |
| 1RAM | PDR050 | X-ray | 20 | nuclear factor kappa-B P65 homodimer |
| 2RAM | PDR051 | X-ray | 20 | nuclear factor kappa-B P65 homodimer |
| 1AOI | PD0001 | X-ray | 146 | nucleosome |
| 1EQZ | PD0137 | X-ray | 146 | nucleosome H2A |
| 1TSR | PDR022 | X-ray | 20 | p53 tumor suppressor |
| 1TUP | PDR027 | X-ray | 20 | p53 tumor suppressor |
| 1PDN | PDR018 | X-ray | 13 | paired protein |
| 6PAX | PD0050 | X-ray | 24 | paired protein |
| 1FJL | PDE025 | X-ray | 41 | paired protein |
| 2OR1 | PDR004 | X-ray | 19 | phage 434 repressor |
| 1PER | PDR015 | X-ray | 19 | phage 434 repressor |
| 1RPE | PDR011 | X-ray | 19 | phage 434 repressor |
| 1LLI | PDR016 | X-ray | 19 | phage lambda repressor |
| 1LMB | PDR010 | X-ray | 19 | phage lambda repressor |
| 1A0A | PDT046 | X-ray | 17 | phosphate system positive regulatory protein PHO4 |
| 1MSE | 1MSE | NMR | 11 | proto-oncogene protein (c-Myb) |
| 1MSF | 1MSF | NMR | 11 | proto-oncogene protein (c-Myb) |
| 1BDH | PDR028 | X-ray | 16 | purine repressor |
| 1BDI | PDR029 | X-ray | 16 | purine repressor |
| 1PNR | PDR020 | X-ray | 16 | purine repressor |
| 2PUA | PDR040 | X-ray | 16 | purine repressor |
| 2PUB | PDR041 | X-ray | 16 | purine repressor |
| 2PUC | PDR042 | X-ray | 16 | purine repressor |
| 2PUD | PDR046 | X-ray | 16 | purine repressor |
| 2PUE | PDR043 | X-ray | 16 | purine repressor |
| 2PUF | PDR044 | X-ray | 16 | purine repressor |
| 2PUG | PDR045 | X-ray | 16 | purine repressor |
| 1QP0 | PD0057 | X-ray | 16 | purine repressor |
| 1QP4 | PD0058 | X-ray | 16 | purine repressor |
| 1QP7 | PD0059 | X-ray | 16 | purine repressor |
| 1QPZ | PD0056 | X-ray | 16 | purine repressor |
| 1QQA | PD0060 | X-ray | 16 | purine repressor |
| 1QQB | PD0061 | X-ray | 16 | purine repressor |
| 1VPW | PDT063 | X-ray | 16 | purine repressor |
| 1WET | PDR030 | X-ray | 16 | purine repressor |
| 1ZAY | PD0109 | X-ray | 16 | purine repressor |
| 1PYI | PDT017 | X-ray | 14 | pyrimidine pathway regulator 1 (PPR1) |
| 193D | 193D | NMR | 8 | quinomycin |
| 1ECR | PDTE01 | X-ray | 14 | replication terminator protein (TUS) |
| 1ESG | PD0139 | X-ray | 8 | restriction endonuclease BamHI |
| 2BAM | PD0029 | X-ray | 10 | restriction endonuclease BamHI |
| 3BAM | PD0031 | X-ray | 10 | restriction endonuclease BamHI |
| 1BHM | PDE020 | X-ray | 10 | restriction endonuclease BamHI |
| 1CKQ | PD0049 | X-ray | 12 | restriction endonuclease EcoRI |
| 1CL8 | PD0054 | X-ray | 12 | restriction endonuclease EcoRI |
| 1ERI | PDE001 | X-ray | 12 | restriction endonuclease EcoRI |
| 1QPS | PD0055 | X-ray | 12 | restriction endonuclease EcoRI |
| 1QRH | PD0062 | X-ray | 12 | restriction endonuclease EcoRI |
| 1QRI | PD0063 | X-ray | 12 | restriction endonuclease EcoRI |
| 1EO3 | PD0129 | X-ray | 9 | restriction endonuclease EcoRV |
| 1EO4 | PD0130 | X-ray | 9 | restriction endonuclease EcoRV |
| 1AZ0 | PDE139 | X-ray | 10 | restriction endonuclease EcoRV |
| 1B94 | PD0037 | X-ray | 10 | restriction endonuclease EcoRV |
| 1B95 | PD0038 | X-ray | 10 | restriction endonuclease EcoRV |
| 1BGB | PD0010 | X-ray | 10 | restriction endonuclease EcoRV |
| 1BSS | PDE0139 | X-ray | 10 | restriction endonuclease EcoRV |
| 1BSU | PDE0145 | X-ray | 10 | restriction endonuclease EcoRV |
| 1BUA | PDE0146 | X-ray | 10 | restriction endonuclease EcoRV |
| 1EON | PD0131 | X-ray | 10 | restriction endonuclease EcoRV |
| 1EOP | PD0133 | X-ray | 10 | restriction endonuclease EcoRV |
| 1RV5 | PD0013 | X-ray | 10 | restriction endonuclease EcoRV |
| 1RVA | PDE014 | X-ray | 10 | restriction endonuclease EcoRV |
| 1RVB | PDE015 | X-ray | 10 | restriction endonuclease EcoRV |
| 1RVC | PDE016 | X-ray | 10 | restriction endonuclease EcoRV |
| 4RVE | PDE003 | X-ray | 10 | restriction endonuclease EcoRV |
| 1EOO | PD0132 | X-ray | 12 | restriction endonuclease EcoRV |
| 2RVE | PDE002 | X-ray | 16 | restriction endonuclease EcoRV |
| 1B96 | PD0039 | X-ray | 10 | restriction endonuclease EcoRV mutant Q69E |
| 1B97 | PD0040 | X-ray | 10 | restriction endonuclease EcoRV mutant Q69L |
| 1FOK | PDE0127 | X-ray | 19 | restriction endonuclease FokI |
| 1EYU | PD0147 | X-ray | 11 | restriction endonuclease PvuII |
| 1PVI | PDE017 | X-ray | 12 | restriction endonuclease PvuII |
| 2PVI | PD0011 | X-ray | 12 | restriction endonuclease PvuII |
| 3PVI | PD0006 | X-ray | 12 | restriction endonuclease PvuII |
| 1DSZ | PD0115 | X-ray | 15 | retinoid X receptor retinoic acid receptor |
| 2NLL | PDR021 | X-ray | 18 | retinoid X receptor-thyroid hormone receptor |
| 1DFU | PR0018 | X-ray | 15 | ribosomal protein L25 |
| 1SRS | PDT021 | X-ray | 18 | serum response factor |
| 1HRY | 1HRY | NMR | 8 | sex reversal Y-chromosomal (SRY) |
| 1HRZ | 1HRZ | NMR | 8 | sex reversal Y-chromosomal (SRY) |
| 1AM9 | PDT062 | X-ray | 38 | sterol regulatory element binding protein 1a |
| 1QPI | PD0122 | X-ray | 15 | tetracycline repressor |
| 1A34 | PRV020 | X-ray | 9 | tobacco mosaic virus |
| 1A31 | PDE0142 | X-ray | 22 | topoisomerase I |
| 1A35 | PDE0143 | X-ray | 22 | topoisomerase I |
| 1A36 | PDE0141 | X-ray | 22 | topoisomerase I |
| 1EJ9 | PD0125 | X-ray | 22 | topoisomerase I |
| 2DRP | PDT011 | X-ray | 18 | tramtrack protein |
| 185D | 185D | NMR | 6 | triostin A |
| 1RCS | 1RCS | NMR | 20 | tryptophan repressor |
| 1TRR | PDR013 | X-ray | 32 | tryptophan repressor |
| 1TRO | PDR009 | X-ray | 37 | tryptophan repressor |
| 1B8I | PD0042 | X-ray | 13 | ultrabithorax-extradenticle heterodimer |
| 1AN4 | PDT027 | X-ray | 20 | upstream stimulatory factor 1 |
| 1H8A | PD0290 | X-ray | 25 | v-Myb-C/EBPbeta |
| 1NK3 | 1NK3 | NMR | 14 | vnd/NK-2 |
| 1NK2 | 1NK2 | NMR | 16 | vnd/NK-2 |
| 1UBD | PDT038 | X-ray | 20 | yin and yang 1 (YY1) |
|
