Entries with manually generated images from the JenaLib are marked in bold .
NAMES FOR PROTEIN/DNA (ENZYMES)
-------------------------------------------------------------------------
NDB PDB CSD Descriptor Coord
-------------------------------------------------------------------------
PD0002 1A73 n.a. INTRON-ENCODED ENDONUCLEASE I-PPOI/DNA Y
COMPLEX
PD0003 1CRX n.a. CRE RECOMBINASE/DNA COMPLEX Y
PD0005 2HMI n.a. HIV-1 REVERSE TRANSCRIPTASE/FRAGMENT OF FAB Y
28/DNA COMPLEX
PD0006 3PVI n.a. RESTRICTION ENDONUCLEASE PVUII (MUTANT Y
D34G)/DNA COMPLEX
PD0009 1BNK n.a. 3-METHYLADENINE DNA GLYCOSYLASE Y
(E.C.3.2.2.21)/DNA COMPLEX
PD0010 1BGB n.a. ECORV ENDONUCLEASE/DNA COMPLEX Y
PD0011 2PVI n.a. RESTRICTION ENDONUCLEASE (E.C.3.1.21.4)/DNA Y
COMPLEX
PD0013 1RV5 n.a. ECORV ENDONUCLEASE/DNA COMPLEX Y
PD0014 2KFN n.a. KLENOW FRAGMENT/DNA COMPLEX Y
PD0015 2KFZ n.a. KLENOW FRAGMENT OF DNA POLYMERASE I/DNA Y
COMPLEX
PD0017 7MHT n.a. CYTOSINE-SPECIFIC METHYLTRANSFERASE Y
HHAI/DNA COMPLEX
PD0018 8MHT n.a. CYTOSINE-SPECIFIC METHYLTRANSFERASE Y
HHAI/DNA COMPLEX
PD0019 9MHT n.a. CYTOSINE-SPECIFIC METHYLTRANSFERASE Y
HHAI/DNA COMPLEX
PD0023 1RTD n.a. REVERSE TRANSCRIPTASE (E.C.2.7.7.49) MUTANT Y
(P1K, Q258C, E478Q)/DNA COMPLEX
PD0026 1BP7 n.a. ENDONUCLEASE I-CREI/DNA COMPLEX Y
PD0029 2BAM n.a. PROTEIN (ENDONUCLEASE BAMHI) (3.1.21.4)/DNA Y
COMPLEX
PD0030 2KTQ n.a. LARGE FRAGMENT OF DNA POLYMERASE I/DNA Y
COMPLEX
PD0031 3BAM n.a. PROTEIN (RESTRICTION ENDONUCLEASE BAMHI) Y
(3.1.21.4)/DNA COMPLEX
PD0032 3KTQ n.a. LARGE FRAGMENT OF DNA POLYMERASE I/DNA Y
COMPLEX
PD0033 4KTQ n.a. LARGE FRAGMENT OF DNA POLYMERASE I/DNA Y
COMPLEX
PD0034 10MH n.a. CYTOSINE-SPECIFIC METHYLTRANSFERASE Y
HHAI/DNA COMPLEX
PD0037 1B94 n.a. RESTRICTION ENDONUCLEASE ECORV Y
(E.C.3.1.21.4)/DNA COMPLEX
PD0038 1B95 n.a. RESTRICTION ENDONUCLEASE ECORV Y
(E.C.3.1.21.4)/DNA COMPLEX
PD0039 1B96 n.a. RESTRICTION ENDONUCLEASE ECORV Y
(E.C.3.1.21.4)/DNA COMPLEX
PD0040 1B97 n.a. RESTRICTION ENDONUCLEASE ECORV Y
(E.C.3.1.21.4)/DNA COMPLEX
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NAMES FOR PROTEIN/DNA (ENZYMES)
-------------------------------------------------------------------------
NDB PDB CSD Descriptor Coord
-------------------------------------------------------------------------
PD0041 4SKN n.a. URACIL-DNA GLYCOSYLASE/DNA COMPLEX Y
PD0043 2PJR n.a. HELICASE PCRA (E.C.3.6.1.-)/DNA COMPLEX Y
PD0044 3PJR n.a. HELICASE PCRA (E.C. 3.6.1.-)/DNA COMPLEX Y
PD0047 4CRX n.a. CRE RECOMBINASE/DNA COMPLEX Y
PD0048 5CRX n.a. BACTERIOPHAGE P1 CRE GENE/DNA COMPLEX Y
PD0049 1CKQ n.a. ENDONUCLEASE/DNA COMPLEX Y
PD0052 1SSP n.a. URACIL-DNA GLYCOSYLASE (E.C.3.2.2.-)/DNA Y
COMPLEX
PD0053 2SSP n.a. URACIL-DNA GLYCOSYLASE/DNA COMPLEX Y
PD0054 1CL8 n.a. ENDONUCLEASE/DNA COMPLEX Y
PD0055 1QPS n.a. ENDONUCLEASE ECORI/DNA COMPLEX Y
PD0062 1QRH n.a. RESTRICTION ENDONUCLEASE ECO-RI/DNA COMPLEX Y
PD0063 1QRI n.a. ECO RI ENDONCULEASE/DNA COMPLEX Y
PD0064 1QSL n.a. KLENOW FRAGMENT OF DNA POLYMERASE I Y
(E.C.2.7.7.7)/DNA COMPLEX
PD0065 1QSY n.a. KLENOW FRAGMENT OF DNA POLYMERASE I Y
(E.C.2.7.7.7)/DNA COMPLEX
PD0066 1QSS n.a. KLENOW FRAGMENT OF DNA POLYMERASE I Y
(E.C.2.7.7.7)/DNA COMPLEX
PD0067 1QTM n.a. DNA POLYMERASE I (E.C.2.7.7.7)/DNA COMPLEX Y
PD0068 1QUM n.a. ENDONUCLEASE IV (E.C.3.1.21.2)/DNA Y
PD0072 1D8Y n.a. DNA POLYMERASE I (E.C.2.7.7.7)/DNA COMPLEX Y
PD0079 1CLQ n.a. DNA POLYMERASE (E.C.2.7.7.7)/DNA COMPLEX Y
PD0080 1D9F n.a. DNA POLYMERASE I (E.C.2.7.7.7)/DNA COMPLEX Y
PD0085 1DC1 n.a. BSOBI RESTRICTION ENDONUCLEASE Y
(E.C.3.1.21.4)/DNA COMPLEX
PD0086 1CEZ n.a. BACTERIOPHAGE T7 RNA POLYMERASE/DNA COMPLEX Y
PD0093 1DE8 n.a. MAJOR APURINIC/APYRIMIDINIC ENDONUCLEASE Y
(E.C.4.2.99.18)/DNA COMPLEX
PD0094 1DE9 n.a. MAJOR APURINIC/APYRIMIDINIC ENDONUCLEASE Y
(E.C.4.2.99.18)/DNA COMPLEX
PD0095 1DEW n.a. MAJOR APURINIC/APYRIMIDINIC ENDONUCLEASE Y
(E.C.4.2.99.18)/DNA COMPLEX
-------------------------------------------------------------------------
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NAMES FOR PROTEIN/DNA (ENZYMES)
-------------------------------------------------------------------------
NDB PDB CSD Descriptor Coord
-------------------------------------------------------------------------
PD0096 1CYQ n.a. INTRON-ENCODED HOMING ENDONUCLEASE I-PPOI Y
(E.C.3.1.-.-)/DNA COMPLEX
PD0097 1CZ0 n.a. INTRON-ENCODED HOMING ENDONUCLEASE I-PPOI Y
(E.C.3.1.-.-)/DNA COMPLEX
PD0098 1BDX n.a. HOLLIDAY JUNCTION DNA HELICASE RUVA/DNA Y
COMPLEX
PD0099 1DIZ n.a. 3-METHYLADENINE DNA GLYCOSYLASE II Y
(E.C.3.2.2.21)/DNA COMPLEX
PD0100 1CW0 n.a. DNA MISMATCH ENDONUCLEASE (E.C.3.1.-.-)/DNA Y
COMPLEX
PD0101 1DFM n.a. ENDONUCLEASE BGLII/DNA COMPLEX Y
PD0103 2CRX n.a. CRE RECOMBINASE/DNA COMPLEX Y
PD0104 3CRX n.a. CRE RECOMBINASE MUTANT (R173K)/DNA COMPLEX Y
PD0105 2KZM n.a. PDNA POLYMERASE I (E.C.2.7.7.7)/DNA COMPLEX Y
PD0106 2KZZ n.a. DNA POLYMERASE I (E.C.2.7.7.7)/DNA COMPLEX Y
PD0108 1DMU n.a. BGLI RESTRICTION ENDONUCLEASE Y
(E.C.3.1.21.4)/DNA COMPLEX
PD0113 1DRG n.a. CRE RECOMBINASE/DNA COMPLEX Y
PD0117 1EBM n.a. 8-OXOGUANINE DNA GLYCOSYLASE/DNA COMPLEX Y
PD0125 1EJ9 n.a. DNA TOPOISOMERASE I (E.C.5.99.1.2)/DNA Y
COMPLEX
PD0126 1QAI n.a. REVERSE TRANSCRIPTASE (E.C.2.7.7.49)/DNA Y
COMPLEX
PD0127 1EMH n.a. URACIL-DNA GLYCOSYLASE (E.C.3.2.2.3)/DNA Y
COMPLEX
PD0128 1EMJ n.a. URACIL-DNA GLYCOSYLASE (E.C.3.2.2.3)/DNA Y
COMPLEX
PD0129 1EO3 n.a. TYPE II RESTRICTION ENZYME ECORV Y
(E.C.3.1.21.4)/DNA COMPLEX
PD0130 1EO4 n.a. TYPE II RESTRICTION ENZYME ECORV Y
(E.C.3.1.21.4)/DNA COMPLEX
PD0131 1EON n.a. TYPE II RESTRICTION ENZYME ECORV Y
(E.C.3.1.21.4)/DNA COMPLEX
PD0132 1EOO n.a. TYPE II RESTRICTION ENZYME ECORV Y
(E.C.3.1.21.4)/DNA COMPLEX
PD0133 1EOP n.a. TYPE II RESTRICTION ENZYME ECORV Y
(E.C.3.1.21.4)/DNA COMPLEX
PD0134 1QAJ n.a. REVERSE TRANSCRIPTASE (E.C.2.7.7.49)/DNA Y
COMPLEX
PD0135 1D0E n.a. REVERSE TRANSCRIPTASE (E.C.2.7.7.49)/DNA Y
COMPLEX
PD0139 1ESG n.a. TYPE II RESTRICTION ENZYME BAMH Y
(E.C.3.1.21.4)/DNA COMPLEX
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NAMES FOR PROTEIN/DNA (ENZYMES)
-------------------------------------------------------------------------
NDB PDB CSD Descriptor Coord
-------------------------------------------------------------------------
PD0140 1EVW n.a. I-PPOI HOMING ENDONUCLEASE/DNA COMPLEX Y
PD0141 1EWN n.a. 3-METHYL-ADENINE DNA GLYCOSYLASE Y
(E.C.3.2.2.21)/DNA COMPLEX
PD0147 1EYU n.a. TYPE II RESTRICTION ENZYME PVUII Y
(E.C.3.1.21.4)/DNA COMPLEX
PD0149 1F0O n.a. TYPE II RESTRICTION ENZYME PVUII Y
(E.C.3.1.21.4)/DNA COMPLEX
PD0150 1F0V n.a. RIBONUCLEASE A/DNA COMPLEX Y
PD0151 1D02 n.a. RESTRICTION ENDONUCLEASE/DNA COMPLEX Y
PD0152 1D1U n.a. PROTEIN (MOLONEY MURINE LEUKEMIA VIRUS Y
REVERSE TRANSCRIPTASE)/DNA COMPLEX
PD0153 1D2I n.a. RESTRICTION ENDONUCLEASE BGLI/DNA COMPLEX Y
PD0166 1F44 n.a. CRE RECOMBINASE/DNA COMPLEX Y
PD0168 1F4R n.a. 3-METHYL-ADENINE DNA GLYCOSYLASE Y
(E.C.3.2.2.20)/DNA COMPLEX
PD0172 1F6O n.a. 3-METHYL-ADENINE DNA GLYCOSYLASE Y
(E.C.3.2.2.20)/DNA COMPLEX
PD0177 1FIU n.a. TYPE II RESTRICTION ENZYME NGOMI Y
(E.C.3.1.21.4)/DNA COMPLEX
PD0178 1FLO n.a. FLP RECOMBINASE/SYMMETRIZED FRT DNA COMPLEX Y
PD0179 1FN7 n.a. 8-OXOGUANINE DNA GLYCOSYLASE 1 (E.C.3.2.2.- Y
)/DNA COMPLEX
PD0188 1G38 n.a. MODIFICATION METHYLASE TAQI Y
(E.C.2.1.1.72)/DNA COMPLEX
PD0189 1G9Y n.a. DNA ENDONUCLEASE I-CREI (E.C. 3.1.-.-)/DNA Y
COMPLEX
PD0190 1G9Z n.a. DNA ENDONUCLEASE I-CREI (E.C. 3.1.-.-)/DNA Y
COMPLEX
PD0194 1FJX n.a. HHAI METHYLTRANSFERASE MUTANT (T250G) (E.C. Y
2.1.1.73), DNA AND ADOHCY
PD0195 1HU0 n.a. 8-OXOGUANINE DNA GLYCOSYLASE 1 (E.C. 3.2.2.- Y
)/DNA COMPLEX
PD0196 1HUO n.a. DNA POLYMERASE BETA/DNA COMPLEX Y
PD0197 1HUZ n.a. DNA POLYMERASE BETA/DNA COMPLEX Y
PD0200 1I3J n.a. INTRON-ASSOCIATED ENDONUCLEASE 1/DNA Complex Y
PD0202 1I6J n.a. REVERSE TRANSCRIPTASE (E.C. 2.7.7.49)/DNA Y
Complex
PD0203 1I7D n.a. DNA TOPOISOMERASE III (E.C. 5.99.1.2)/DNA Y
Complex
PD0207 1IAW n.a. TYPE II RESTRICTION ENZYME NAEI (E.C. Y
3.1.21.4)/DNA Complex
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NAMES FOR PROTEIN/DNA (ENZYMES)
-------------------------------------------------------------------------
NDB PDB CSD Descriptor Coord
-------------------------------------------------------------------------
PD0212 1IG9 n.a. DNA POLYMERASE/DNA Complex Y
PD0213 1IJW n.a. HIN RECOMBINASE/DNA COMPLEX Y
PD0216 1HHT n.a. P2 PROTEIN/DNA Complex Y
PD0217 1HI0 n.a. P2 PROTEIN/DNA Complex Y
PD0220 1JEY n.a. Ku Heterodimer/DNA complex Y
PD0228 1JJ6 n.a. HIN RECOMBINASE/DNA Complex Y
PD0229 1JJ8 n.a. HIN RECOMBINASE/DNA Complex Y
PD0234 1JKO n.a. HIN RECOMBINASE/DNA Complex Y
PD0235 1JKP n.a. HIN RECOMBINASE/DNA Complex Y
PD0236 1JKQ n.a. HIN RECOMBINASE/DNA Complex Y
PD0237 1JKR n.a. HIN RECOMBINASE/DNA Complex Y
PD0242 1RNB n.a. BARNASE (E.C.3.1.27.-)/DNA COMPLEX Y
PD0251 1JX4 n.a. DNA POLYMERASE IV(FAMILY Y) (E.C. Y
2.7.7.7)/DNA Complex
PD0252 1JXL n.a. DNA POLYMERASE IV(FAMILY Y) (E.C. Y
2.7.7.7)/DNA Complex
PD0253 1K3W n.a. Endonuclease VIII (E.C.3.2.-.-)/DNA Complex Y
PD0254 1K3X n.a. ENDONUCLEASE VIII (E.C.3.2.-.-)/DNA Complex Y
PD0255 1K4S n.a. DNA TOPOISOMERASE I (E.C.5.99.1.2)/DNA Y
Complex
PD0256 1K4T n.a. DNA TOPOISOMERASE I (E.C.5.99.1.2)/DNA Y
Complex
PD0264 1K82 n.a. Formamidopyrimidine-DNA glycosylase Y
(E.C.3.2.2.23)/DNA Complex
PD0267 1GM5 n.a. RECG/DNA Complex Y
PD0271 1KBU n.a. CRE RECOMBINASE/DNA Complex Y
PD0272 1KC6 n.a. TYPE II RESTRICTION ENZYME HINCII Y
(E.C.3.1.21.4)/DNA complex
PD0275 1KDH n.a. Terminal deoxynucleotidyltransferase short Y
isoform (E.C.2.7.7.31)/DNA complex
PD0277 1KFV n.a. Formamido-pyrimidine DNA glycosylase Y
(E.C.3.2.2.23)/DNA Complex
PD0292 1L1T n.a. MUTM/DNA Complex Y
-------------------------------------------------------------------------
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NAMES FOR PROTEIN/DNA (ENZYMES)
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NDB PDB CSD Descriptor Coord
-------------------------------------------------------------------------
PD0293 1L1Z n.a. MutM/DNA Complex Y
PD0295 1L2C n.a. MutM/DNA Complex Y
PD0296 1L2D n.a. MutM/DNA Complex Y
PD0300 1L3S n.a. DNA POLYMERASE I (E.C.2.7.7.7)/DNA Complex Y
PD0301 1L3T n.a. DNA Polymerase I (E.C.2.7.7.7)/DNA Complex Y
PD0302 1L3U n.a. DNA POLYMERASE I (E.C.2.7.7.7)/DNA Complex Y
PD0303 1L3V n.a. DNA POLYMERASE I (E.C.2.7.7.7)/DNA Complex Y
PD0304 1L5U n.a. DNA POLYMERASE I (E.C.2.7.7.7)/DNA Complex Y
PD0305 1L9Z n.a. RNA polymerase Holoenzyme/DNA Y
PD0306 1LB2 n.a. CATABOLITE GENE ACTIVATOR PROTEIN/DNA- Y
directed RNA polymerase alpha chain
(E.C.2.7.7.6)/DNA Complex, ADENOSINE-3',5'-
CYCLIC-MONOPHOSPHATE
PD0313 1LPQ n.a. DNA topoisomerase I (E.C.5.99.1.2)/DNA Y
Complex
PD0316 1J5O n.a. CRYSTAL STRUCTURE OF MET184ILE MUTANT OF Y
HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH
DOUBLE STRANDED DNA TEMPLATE-PRIMER
PD0317 1LV5 n.a. DNA POLYMERASE I (E.C.2.7.7.7)/DNA Complex Y
PD0319 1LWS n.a. ENDONUCLEASE PI-SCEI/DNA Complex Y
PD0320 1LWT n.a. ENDONUCLEASE PI-SCEI/DNA Complex Y
PD0321 1LWV n.a. 8-OXOGUANINE DNA GLYCOSYLASE (E.C.3.2.2.- Y
)/DNA Complex
PD0322 1LWW n.a. 8-OXOGUANINE DNA GLYCOSYLASE (E.C.3.2.2.- Y
)/DNA Complex
PD0323 1LWY n.a. 8-OXOGUANINE DNA GLYCOSYLASE (E.C.3.2.2.- Y
)/DNA complex
PD0327 1M0E n.a. Modification methylase HhaI/DNA Complex Y
PD0331 1M3H n.a. 8-OXOGUANINE DNA GLYCOSYLASE (E.C.3.2.2.- Y
)/DNA Complex
PD0332 1M3Q n.a. 8-oxoguanine DNA glycosylase (E.C.3.2.2.- Y
)/DNA Complex
PD0333 1IXY n.a. DNA beta-glucosyltransferase Y
(E.C.2.4.1.27)/DNA Complex
PD0334 1M5R n.a. DNA beta-glucosyltransferase Y
(E.C.2.4.1.27)//DNA Complex
PD0335 1M5X n.a. DNA endonuclease I-MsoI/DNA Complex Y
PD0336 1M6X n.a. FLP RECOMBINASE/DNA Complex Y
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NAMES FOR PROTEIN/DNA (ENZYMES)
-------------------------------------------------------------------------
NDB PDB CSD Descriptor Coord
-------------------------------------------------------------------------
PD0337 1MA7 n.a. CRE RECOMBINASE/DNA Complex Y
PD0340 1MM8 n.a. Tn5 transposase/DNA Complex Y
PD0342 1MOW n.a. chimera of homing endonuclease I-DmoI and Y
DNA endonuclease I-CreI (E.C.3.1.-.-)/DNA
PD0343 1MQ2 n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
Complex
PD0344 1MQ3 n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
Complex
PD0345 1MSW n.a. DNA-directed RNA polymerase Y
(E.C.2.7.7.6)/DNA/RNA Complex
PD0346 1MTL n.a. G/U mismatch-specific DNA glycosylase Y
(E.C.3.2.2.2-)/DNA Complex
PD0347 1MUH n.a. TN5 TRANSPOSASE/DNA COMPLEX Y
PD0349 1MUR n.a. TN5 TRANSPOSASE/DNA Complex Y
PD0350 1MUS n.a. TN transposase/DNA Complex Y
PD0353 1MWI n.a. G/U mismatch-specific DNA glycosylase Y
(E.C.3.2.2.-)/DNA COMPLEX
PD0354 1MWJ n.a. G/U mismatch-specific DNA glycosylase Y
(E.C.3.2.2.-)/DNA COMPLEX
PD0358 1N48 n.a. DNA polymerase IV (E.C.2.7.7.7)/DNA Y
PD0359 1N4L n.a. Reverse Transcriptase (E.C.2.7.7.49)/DNA Y
complex
PD0360 1N3E n.a. DNA endonuclease I-CreI (E.C.3.1.-.-)/DNA Y
PD0361 1N3F n.a. DNA endonuclease I-CreI (E.C.3.1.-.-)/DNA Y
PD0362 1N56 n.a. DNA polymerase IV(E.C.2.7.7.7)/DNA Y
PD0364 1N6Q n.a. reverse transcriptase Y
(E.C.2.7.7.49)/monoclonal antibody fab28
light and heavy chains/DNA
PD0365 1N5Y n.a. reverse transcriptase Y
(E.C.2.7.7.49)/monoclonal antibody fab28
light and heavy chains/DNA
PD0370 1NH3 n.a. DNA topoisomerase I/DNA Complex Y
PD0372 1NJW n.a. DNA POLYMERASE I (E.C.2.7.7.7)/DNA Complex Y
PD0373 1NJX n.a. DNA POLYMERASE I (E.C.2.7.7.7)/DNA COMPLEX Y
PD0374 1NJY n.a. DNA Polymerase I (E.C.2.7.7.7)/DNA Complex Y
PD0375 1NJZ n.a. DNA POLYMERASE I (E.C.2.7.7.7)/DNA Complex Y
PD0376 1NK0 n.a. DNA POLYMERASE I (E.C.2.7.7.7)/DNA complex Y
-------------------------------------------------------------------------
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NAMES FOR PROTEIN/DNA (ENZYMES)
-------------------------------------------------------------------------
NDB PDB CSD Descriptor Coord
-------------------------------------------------------------------------
PD0377 1NK4 n.a. DNA polymerase I (E.C.2.7.7.7)/DNA complex Y
PD0378 1NK5 n.a. DNA polymerase I (E.C.2.7.7.7)/DNA Complex Y
PD0379 1NK6 n.a. DNA polymerase I (E.C.2.7.7.7)/DNA Complex Y
PD0380 1NK7 n.a. DNA polymerase I (E.C.2.7.7.7)/DNA Complex Y
PD0381 1NK8 n.a. DNA polymerase I (E.C.2.7.7.7)/DNA Complex Y
PD0382 1NK9 n.a. DNA polymerase I (E.C.2.7.7.7)/DNA complex Y
PD0383 1NKB n.a. DNA polymerase I (E.C.2.7.7.7)/DNA complex Y
PD0384 1NKC n.a. DNA polymerase I (E.C.2.7.7.7)/DNA complex Y
PD0385 1NKE n.a. DNA polymerase I (E.C.2.7.7.7)/DNA Complex Y
PD0391 1NOP n.a. tyrosyl-DNA phosphodiesterase 1/DNA Complex Y
PD0392 1NZB n.a. Cre recombinase/DNA COMPLEX Y
PD0394 1OMH n.a. TrwC protein/DNA Complex Y
PD0396 1ORN n.a. ENDONUCLEASE III/DNA Y
PD0397 1ORP n.a. ENDONUCLEASE III/DNA Y
PD0402 1OSB n.a. TRWC PROTEIN/DNA Complex Y
PD0403 1OUP n.a. Nuclease (E.C.3.1.-.-) Y
PD0404 1OUQ n.a. Cre recombinase/DNA COMPLEX Y
PD0427 1P59 n.a. Endonuclease III/5'- Y
D(*AP*AP*GP*AP*CP*GP*(5IU)P*GP*GP*AP*C)-
3'/5'-
D(*GP*(5IU)P*CP*CP*AP*(3DR)P*GP*(5IU)P*CP*T)
-3'
PD0428 1P7D n.a. Lambda Integrase/DNA Complex Y
PD0433 1P8K n.a. Intron-encoded endonuclease I-AniI/DNA Y
PD0454 1PT3 n.a. Colicin E7 (E.C.3.1.-.-)/DNA Complex Y
PD0460 1Q0T n.a. DNA adenine methylase (E.C.2.1.1.72)/DNA Y
Complex
PD0461 1Q3F n.a. Uracil-DNA glycosylase(E.C.3.2.2.-)/DNA Y
Complex
PD0462 1Q3U n.a. Cre recombinase/DNA COMPLEX Y
PD0463 1Q3V n.a. Cre recombinase/DNA COMPLEX Y
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-------------------------------------------------------------------------
NDB PDB CSD Descriptor Coord
-------------------------------------------------------------------------
PD0467 1QX0 n.a. trwC PROTEIN/DNA Complex Y
PD0473 1R2Y n.a. MutM/DNA Complex Y
PD0474 1R2Z n.a. MutM/DNA Complex Y
PD0477 1R49 n.a. DNA topoisomerase I (E.C.5.99.1.2)/DNA Y
Complex
PD0485 1RFF n.a. Tyrosyl-DNA phosphodiesterase 1 (E.C.3.1.4.- Y
)/Topoisomerase I-Derived peptide/DNA
Complex
PD0486 1RFI n.a. Tyrosyl-DNA Phosphodiesterase (E.C.3.1.4.- Y
)/Topoisomerase I-Derived Peptide/DNA
complex
PD0487 1RG1 n.a. Tyrosyl-DNA Phosphodiesterase 1 (E.C.3.1.4.- Y
)/DNA complex
PD0488 1RG2 n.a. Tyrosyl-DNA Phosphodiesterase 1 (E.C.3.1.4.- Y
)/DNA complex
PD0489 1RGT n.a. Tyrosyl-DNA Phosphodiesterase 1 (E.C.3.1.4.- Y
)/DNA complex
PD0490 1RGU n.a. Tyrosyl-DNA Phosphodiesterase 1 (E.C.3.1.4.- Y
)/DNA complex
PD0491 1RH0 n.a. Tyrosyl-DNA Phosphodiesterase 1 (E.C.3.1.4.- Y
)/DNA complex
PD0493 1RC8 n.a. Polynucleotide kinase/DNA Y
PD0499 1RPZ n.a. Polynucleotide kinase (E.C.2.7.1.78)/DNA Y
Complex
PD0500 1RRC n.a. Polynucleotide kinase (E.C.2.7.1.78)/DNA Y
Complex
PD0501 1RXV n.a. Flap structure-specific endonuclease/5'- Y
d(*T*pA*pG*pC*pA*pT*pC*pG*pG)
PD0502 1RXW n.a. 5'-d(*C*pG*pA*pT*pG*pC*pT*pA)-3'/5'- Y
d(*T*pA*pG*pC*pA*pT*pC*pG*pG)-3'/Flap
structure-specific endonuclease
PD0503 1RZT n.a. NA polymerase lambda (E.C.2.7.7.7)/DNA Y
Complex
PD0504 1RYR n.a. DNA polymerase IV (E.C.2.7.7.7)/DNA Complex Y
PD0505 1RYS n.a. DNA polymerase IV (E.C.2.7.7.7)/DNA Complex Y
PDE001 1ERI n.a. ECO RI ENDONUCLEASE (E.C.3.1.21.4)/DNA Y
COMPLEX
PDE002 2RVE n.a. ECO RV (E.C.3.1.21.4)/DNA COMPLEX Y
PDE003 4RVE n.a. ECO RV (E.C.3.1.21.4)/DNA COMPLEX Y
PDE004 1KLN n.a. DNA POLYMERASE I KLENOW FRAGMENT Y
(E.C.2.7.7.7) MUTANT/DNA COMPLEX
PDE005 1DNK n.a. DEOXYRIBONUCLEASE I (DNASE I) Y
(E.C.3.1.21.1)/DNA COMPLEX + N-ACETYL-D-
GLUCOSAMINE
PDE006 2DNJ n.a. DEOXYRIBONUCLEASE I (DNASE I) Y
(E.C.3.1.21.1)/DNA COMPLEX + N-ACETYL-D-
GLUCOSAMINE
-------------------------------------------------------------------------
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NAMES FOR PROTEIN/DNA (ENZYMES)
-------------------------------------------------------------------------
NDB PDB CSD Descriptor Coord
-------------------------------------------------------------------------
PDE009 1HCR n.a. HIN RECOMBINASE/DNA COMPLEX Y
PDE010 1BRN n.a. BARNASE (E.C.3.1.27.-)/DNA COMPLEX Y
PDE0100 9ICK n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF
ARTIFICIAL MOTHER LIQUOR
PDE0101 9ICL n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF
PYROPHOSPHATE AND MNCL2
PDE0102 9ICM n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, NO 5'-PHOSPHATE
PDE0103 9ICN n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX + 2',3'-DIDEOXYCYTIDINE-5'-
TRIPHOSPHATE, SOAKED IN THE PRESENCE OF
DDCTP AND MGCL2
PDE0104 9ICO n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF DTTP AND
MGCL2
PDE0105 9ICP n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF
PYROPHOSPHATE AND MGCL2
PDE0106 9ICQ n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX + 2'-DEOXYADENOSINE-5'-
TRIPHOSPHATE, SOAKED IN THE PRESENCE OF
DATP AND MNCL2
PDE0107 9ICR n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX + 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE,
SOAKED IN THE PRESENCE OF DCTP AND MNCL2
PDE0108 9ICS n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX + 2',3'-DIDEOXYCYTIDINE-5'-
TRIPHOSPHATE, SOAKED IN THE PRESENCE OF
DDCTP AND MNCL2
PDE0109 9ICT n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX + 2'-DEOXYGUANOSINE-5'-
TRIPHOSPHATE, SOAKED IN THE PRESENCE OF
DGTP AND MNCL2
PDE011 2BPF n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX + 2'-DIDEOXYCYTIDINE-5'-TRIPHOSPHATE
PDE0110 9ICU n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX + THYMIDINE-5'-TRIPHOSPHATE, SOAKED
IN THE PRESENCE OF DTTP AND MNCL2
PDE0111 9ICV n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX + 2'-DEOXYADENOSINE-5'-
TRIPHOSPHATE, SOAKED IN THE PRESENCE OF
DATP AND ZNCL2
PDE0112 9ICW n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, NATIVE STRUCTURE
PDE0113 9ICX n.a. DNA POLYMERASE BETA (POL B) Y
(E.C.2.7.7.7)/DNA COMPLEX (NON GAPPED DNA
ONLY)
PDE0114 9ICY n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX
PDE0115 1GDT n.a. GAMMA DELTA RESOLVASE/DNA COMPLEX Y
PDE0116 1RTA n.a. RIBONUCLEASE A (E.C.3.1.27.5)/DNA COMPLEX Y
PDE0117 1RCN n.a. RIBONUCLEASE A (E.C.3.1.27.5)/DNA COMPLEX Y
PDE012 2BPG n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX + 2',3'-DIDEOXYCYTIDINE-5'-
TRIPHOSPHATE
PDE0121 3MHT n.a. URACIL-DNA GLYCOSYLASE (E.C.2.1.1.73)/DNA Y
COMPLEX + S-ADENOSYL-L-HOMOCYSTEINE
PDE0124 1BPZ n.a. DNA POLYMERASE BETA/DNA COMPLEX Y
PDE0125 1BPY n.a. DNA POLYMERASE BETA/DNA COMPLEX + 2',3'- Y
DIDEOXYCYTIDINE-5'-TRIPHOSPHATE
-------------------------------------------------------------------------
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NAMES FOR PROTEIN/DNA (ENZYMES)
-------------------------------------------------------------------------
NDB PDB CSD Descriptor Coord
-------------------------------------------------------------------------
PDE0126 1BPX n.a. DNA POLYMERASE BETA/DNA COMPLEX (EC 2.7.7.7) Y
PDE0127 1FOK n.a. FOKI RESTRICTION ENDONUCLEASE/DNA COMPLEX Y
PDE0128 1TC3 n.a. TC3 TRANSPOSASE/DNA COMPLEX Y
PDE0129 1UAA n.a. REP HELICASE/DNA COMPLEX (E.C.3.6.1.-) Y
PDE013 1HUT n.a. ALPHA-THROMBIN (E.C.3.4.21.5)/DNA, PPACK Y
PEPTIDE
PDE0131 2BDP n.a. DNA POLYMERASE I/DNA COMPLEX Y
PDE0132 3BDP n.a. DNA POLYMERASE I/DNA COMPLEX Y
PDE0133 4BDP n.a. DNA POLYMERASE I/DNA COMPLEX Y
PDE0134 1A1V n.a. NS3 PROTEIN/DNA COMPLEX Y
PDE0135 1T7P n.a. DNA POLYMERASE, THIOREDOXIN/DNA COMPLEX, 2'- Y
3'DIDEOXYGUANOSINE-5'-TRIPHOSPHATE
PDE0136 1KSP n.a. DNA POLYMERASE I KLENOW FRAGMENT Y
(E.C.2.7.7.7) MUTANT/DNA COMPLEX
PDE0137 1KFS n.a. DNA POLYMERASE I KLENOW FRAGMENT Y
(E.C.2.7.7.7) MUTANT/DNA COMPLEX
PDE0138 1KRP n.a. DNA POLYMERASE I KLENOW FRAGMENT Y
(E.C.2.7.7.7) MUTANT/DNA COMPLEX
PDE0139 1BSS n.a. ECORV ENDONUCLEASE(T93A)/DNA COMPLEX Y
PDE014 1RVA n.a. ECO RV (E.C.3.1.21.4)/DNA COMPLEX Y
PDE0140 n.a. n.a. MISMATCH SPECIFIC URACIL DNA GLYCOSYLASE N
(MUG)/DNA COMPLEX
PDE0141 1A36 n.a. TOPOISOMERASE I/DNA COMPLEX Y
PDE0142 1A31 n.a. TOPOISOMERASE I (E.C.5.99.1.2)/DNA COMPLEX Y
PDE0143 1A35 n.a. HUMAN TOPOISOMERASE I/DNA COMPLEX Y
PDE0144 1IPP n.a. INTRON-ENCODED ENDONUCLEASE I-PPOI/DNA Y
COMPLEX
PDE0145 1BSU n.a. ENDONUCLEASE ECORV (E.C.3.1.21.4)/DNA Y
COMPLEX
PDE0146 1BUA n.a. ENDONUCLEASE ECORV (E.C.3.1.21.4)/DNA Y
COMPLEX
PDE015 1RVB n.a. ECO RV (E.C.3.1.21.4)/DNA COMPLEX Y
PDE016 1RVC n.a. ECO RV (E.C.3.1.21.4)/DNA COMPLEX Y
PDE017 1PVI n.a. PVUII (E.C.3.1.21.4)/DNA COMPLEX Y
-------------------------------------------------------------------------
Page 11 created by the NDB Project on Wed May 26 14:30:26 2004
NAMES FOR PROTEIN/DNA (ENZYMES)
-------------------------------------------------------------------------
NDB PDB CSD Descriptor Coord
-------------------------------------------------------------------------
PDE020 1BHM n.a. BAMHI (E.C.3.1.21.4)/DNA COMPLEX Y
PDE022 1VAS n.a. T4 ENDONUCLEASE V (E.C.3.1.25.1) MUTANT/DNA Y
COMPLEX
PDE023 1RBJ n.a. RIBONUCLEASE B (E.C.3.1.27.5)/DNA COMPLEX Y
PDE024 1TAU n.a. TAQ POLYMERASE (E.C.2.7.7.7)/DNA/B- Y
OCTYLGLUCOSIDE COMPLEX
PDE026 1LAU n.a. URACIL-DNA GLYCOSYLASE (E.C.3.2.2.-)/DNA Y
COMPLEX
PDE027 1ZQA n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF KCL AT
PH 7.5
PDE028 1ZQB n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF BACL2
PDE029 1ZQC n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF CACL2
PDE030 1ZQD n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF CACL2
PDE031 1ZQE n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF CRCL3
PDE032 1ZQF n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF CSCL
PDE033 1ZQG n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF A SODIUM-
FREE ARTIFICIAL MOTHER LIQUOR AT PH 6.5
PDE034 1ZQH n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF A SODIUM-
FREE ARTIFICIAL MOTHER LIQUOR AT PH 7.5
PDE035 1ZQI n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF KCL
PDE036 1ZQJ n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF CACL2
AND MGCL2
PDE037 1ZQK n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF KCL AND
MGCL2
PDE038 1ZQL n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF MNCL2
AND MGCL2
PDE039 1ZQM n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF MNCL2
PDE040 1ZQN n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF BACL2
AND NACL
PDE041 1ZQO n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF CACL2
AND NACL
PDE042 1ZQP n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF KCL AND
NACL
PDE043 1ZQQ n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF MNCL2
AND NACL
PDE044 1ZQR n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF NICL2
PDE045 1ZQS n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF TLCL
PDE046 1ZQT n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF DATP AND
ZNCL2
-------------------------------------------------------------------------
Page 12 created by the NDB Project on Wed May 26 14:30:26 2004
NAMES FOR PROTEIN/DNA (ENZYMES)
-------------------------------------------------------------------------
NDB PDB CSD Descriptor Coord
-------------------------------------------------------------------------
PDE047 7ICE n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX
PDE048 7ICF n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF CDCL2
PDE049 7ICG n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF CDCL2
PDE050 7ICH n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF COCL2
PDE051 7ICI n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF CRCL3
PDE052 7ICJ n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF CUCL2
PDE053 7ICK n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF MGCL2
PDE054 7ICL n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF MNCL2
PDE055 7ICM n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF MNCL2
PDE056 7ICN n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF NICL2
PDE057 7ICO n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF ZNCL2
PDE058 7ICP n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF ZNCL2
PDE059 7ICQ n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF ZNCL2
PDE060 7ICR n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF ZNCL2
PDE061 7ICS n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF ZNCL2
PDE062 7ICT n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF ZNCL2
AND MGCL2
PDE063 7ICU n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF CDCL2
PDE064 8ICB n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF
ARTIFICIAL MOTHER LIQUOR
PDE065 8ICC n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, NO 5'-PHOSPHATE
PDE066 8ICE n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX + 2'-DEOXYADENOSINE-5'-
TRIPHOSPHATE, SOAKED IN THE PRESENCE OF
DATP AND CDCL2
PDE067 8ICF n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX + 2'-DEOXYADENOSINE-5'-
TRIPHOSPHATE, SOAKED IN THE PRESENCE OF
DATP AND MGCL2
PDE068 8ICG n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF DATP AND
MGCL2
PDE069 8ICH n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF DCTP AND
MGCL2
PDE070 8ICI n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF DGTP AND
MGCL2
PDE071 8ICJ n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX + THYMIDINE-5'-TRIPHOSPHATE, SOAKED
IN THE PRESENCE OF DTTP AND MGCL2
-------------------------------------------------------------------------
Page 13 created by the NDB Project on Wed May 26 14:30:26 2004
NAMES FOR PROTEIN/DNA (ENZYMES)
-------------------------------------------------------------------------
NDB PDB CSD Descriptor Coord
-------------------------------------------------------------------------
PDE072 8ICK n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX + 2'-DEOXYADENOSINE-5'-
TRIPHOSPHATE, SOAKED IN THE PRESENCE OF
DATP, MGCL2, AND MNCL2
PDE073 8ICL n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX + 2'-DEOXYADENOSINE-5'-
TRIPHOSPHATE, SOAKED IN THE PRESENCE OF
DATP AND NICL2
PDE074 8ICM n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF DATP,
MNCL2, AND AMMONIUM SULFATE
PDE075 8ICN n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX + ADENOSINE-5'-TRIPHOSPHATE, SOAKED
IN THE PRESENCE OF ATP AND MNCL2
PDE076 8ICO n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX + 3'-AZIDO-3'-DEOXYTHYMIDINE-5'-
TRIPHOSPHATE, SOAKED IN THE PRESENCE OF AZT-
TP AND MNCL2
PDE077 8ICP n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX + 2'-DEOXYADENOSINE-5'-
TRIPHOSPHATE, SOAKED IN THE PRESENCE OF
DATP AND MNCL2
PDE078 8ICQ n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF OF DATP
AND MNCL2
PDE079 8ICR n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX + 2'-DEOXYADENOSINE-5'-
TRIPHOSPHATE, SOAKED IN THE PRESENCE OF
DATP AND MNCL2
PDE080 8ICS n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX + 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE,
SOAKED IN THE PRESENCE OF DCTP AND MNCL2
PDE081 8ICT n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX + 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE,
SOAKED IN THE PRESENCE OF DCTP AND MNCL2
PDE082 8ICU n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX + 2',3'-DIDEOXYADENOSINE-5'-
TRIPHOSPHATE, SOAKED IN THE PRESENCE OF
DDATP AND MNCL2
PDE083 8ICV n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX + 2'-DEOXYGUANOSINE-5'-
TRIPHOSPHATE, SOAKED IN THE PRESENCE OF
DGTP AND MNCL2
PDE084 8ICW n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX + THYMIDINE-5'-TRIPHOSPHATE, SOAKED
IN THE PRESENCE OF DTTP AND MNCL2
PDE085 8ICX n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX + THYMIDINE-5'-TRIPHOSPHATE, SOAKED
IN THE PRESENCE OF DTTP AND MNCL2
PDE086 8ICY n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX + THYMIDINE-5'-TRIPHOSPHATE, SOAKED
IN THE PRESENCE OF DTTP AND MNCL2
PDE087 8ICZ n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF OF DATP,
MNCL2, AND LITHIUM SULFATE
PDE088 7ICV n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF MNCL2
AND IN THE ABSENCE OF NACL
PDE089 8ICA n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX + 2'-DEOXYADENOSINE-5'-
TRIPHOSPHATE, SOAKED IN THE PRESENCE OF
DATP AND CACL2
PDE090 1NOY n.a. DNA POLYMERASE (E.C.2.7.7.7)/DNA COMPLEX Y
PDE091 9ICA n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX + 2'-DEOXYADENOSINE-5'-O-(1-
THIOTRIPHOSPHATE), SOAKED IN THE PRESENCE
OF DATP(ALPHA)S AND MNCL2
PDE092 9ICB n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX + 2'-DEOXYADENOSINE-5'-
TRIPHOSPHATE, SOAKED IN THE PRESENCE OF
DATP AND COCL2
PDE093 9ICC n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX + 2'-DEOXYADENOSINE-5'-
TRIPHOSPHATE, SOAKED IN THE PRESENCE OF
DATP AND CRCL3
PDE094 9ICE n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF DATP AND
CUCL2
PDE095 9ICF n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX + 2'-DEOXYADENOSINE-5'-
TRIPHOSPHATE, SOAKED IN THE PRESENCE OF
DATP AND ZNCL2
PDE096 9ICG n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX + 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE,
SOAKED IN THE PRESENCE OF DCTP AND ZNCL2
-------------------------------------------------------------------------
Page 14 created by the NDB Project on Wed May 26 14:30:26 2004
NAMES FOR PROTEIN/DNA (ENZYMES)
-------------------------------------------------------------------------
NDB PDB CSD Descriptor Coord
-------------------------------------------------------------------------
PDE097 9ICH n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX + 2'-DEOXYGUANOSINE-5'-
TRIPHOSPHATE, SOAKED IN THE PRESENCE OF
DGTP AND ZNCL2
PDE098 9ICI n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX, SOAKED IN THE PRESENCE OF DTTP AND
ZNCL2
PDE099 9ICJ n.a. DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA Y
COMPLEX
PDE139 1AZ0 n.a. ECORV ENDONUCLEASE (E.C.3.1.21.4)/DNA Y
COMPLEX
PDE140 1A74 n.a. I-PPOL HOMING ENDONUCLEASE/DNA COMPLEX Y
PDE141 6MHT n.a. CYTOSINE-SPECIFIC METHYLTRANSFERASE HHAI Y
(E.C.2.1.1.73)/DNA COMPLEX
PDEB08 1MHT n.a. HHAI METHYLTRANSFERASE (E.C.2.1.1.73)/DNA Y
COMPLEX + S-ADENOSYL-L-HOMOSYTEINE
PDEB122 4MHT n.a. HHAI METHYLTRANSFERASE (E.C.2.1.1.73)/DNA Y
COMPLEX + S-ADENOSYL-L-HOMOSYTEINE
PDEB123 5MHT n.a. HHAI METHYLTRANSFERASE (E.C.2.1.1.7)/DNA Y
COMPLEX + S-ADENOSYL-L-HOMOCYSTEINE
PDEB19 1DCT n.a. AEIII METHYLASE (E.C.2.1.1.37)/DNA COMPLEX Y
PH0001 1QBJ n.a. DOUBLE-STRANDED RNA SPECIFIC ADENOSINE Y
DEAMINASE (ADAR1)/DNA COMPLEX
PH0002 1QLN n.a. BACTERIOPHAGE T7 RNA POLYMERASE Y
(E.C.2.7.7.6)/DNA COMPLEX
PH0003 1HYS n.a. HIV-1 REVERSE TRANSCRIPTASE/FRAGMENT OF FAB Y
28//DNA/RNA Complex
PH0004 1I6H n.a. RNA POLYMERASE II/DNA/RNA Complex Y
PH0008 1S0V n.a. T7 RNA polymerase(E.C.2.7.7.6)/DNA/RNA Y
Complex
PH0011 1SFO n.a. DNA-directed RNA polymerase II largest Y
subunit (E.C.2.7.7.6)/DNA-directed RNA
polymerase II 140 kDa polypeptide
(E.C.2.7.7.6)/DNA-directed RNA polymerase
II 45 kDa polypeptide (E.C.2.7.7.6)/DNA-
directed RNA polymerases I, II, and III 27
kDa polypeptide (E
PR0016 1D9D n.a. DNA POLYMERASE I (E.C.2.7.7.7 )/DNA-RNA Y
COMPLEX
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