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(-) Description

Title :  CYTOSINE-SPECIFIC METHYLTRANSFERASE HHAI/DNA COMPLEX
 
Authors :  M. O'Gara, J. R. Horton, R. J. Roberts, X. Cheng
Date :  06 Aug 98  (Deposition) - 30 Nov 98  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.76
Chains :  Asym./Biol. Unit :  A,C,D
Keywords :  Transferase, Methyltransferase, Restriction System, Complex (Methyltransferase/ Dna), Transferase/Dna Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  M. O'Gara, J. R. Horton, R. J. Roberts, X. Cheng
Structures Of Hhai Methyltransferase Complexed With Substrates Containing Mismatches At The Target Base.
Nat. Struct. Biol. V. 5 872 1998
PubMed-ID: 9783745  |  Reference-DOI: 10.1038/2312
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - 5'-D(P*GP*TP*CP*AP*GP*CP*GP*CP*AP*TP*GP*G)-3'
    ChainsC
    EngineeredYES
    SyntheticYES
 
Molecule 2 - 5'-D(P*CP*CP*AP*TP*GP*UP*GP*CP*TP*GP*AP*C)-3'
    ChainsD
    EngineeredYES
    SyntheticYES
 
Molecule 3 - CYTOSINE-SPECIFIC METHYLTRANSFERASE HHAI
    ChainsA
    EC Number2.1.1.73
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    Organism ScientificHAEMOPHILUS HAEMOLYTICUS
    Organism Taxid726

 Structural Features

(-) Chains, Units

  123
Asymmetric/Biological Unit ACD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric/Biological Unit (2, 2)
No.NameCountTypeFull Name
1DU1Mod. Residue
2SAH1Ligand/IonS-ADENOSYL-L-HOMOCYSTEINE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREPHE A:18 , ALA A:19 , LEU A:21 , GLY A:23 , ASN A:39 , GLU A:40 , TRP A:41 , ASP A:60 , ILE A:61 , ASN A:304 , SER A:305 , VAL A:306 , HOH A:333 , HOH A:338 , HOH A:384BINDING SITE FOR RESIDUE SAH A 328

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 8MHT)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 8MHT)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 8MHT)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 8MHT)

(-) Exons   (0, 0)

(no "Exon" information available for 8MHT)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:327
                                                                                                                                                                                                                                                                                                                                                                       
               SCOP domains d8mhta_ A: DNA methylase HhaI                                                                                                                                                                                                                                                                                                           SCOP domains
               CATH domains 8mhtA01 A:1-186,A:285-327 Vaccinia Virus protein VP39                                                                                                                                     8mhtA02 A:187-284 DNA Methylase, subunit A, domain 2                                              8mhtA01 A:1-186,A:285-327                   CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............eeeee....hhhhhhhhh...eeeeee..hhhhhhhhhhhhh.....hhhhh.........eeee.............hhhhh....hhhhhhhhhhhhh..eeeeeee.hhhh...hhhhhhhhhhhhhh....eeeeee.hhh......eeeeeeee...................hhhhh..hhhhhh.........ee.............eeee........eeee....................eeee..eee..hhhhhhhhh..........hhhhhhhhhhhh.hhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 8mht A   1 MIEIKDKQLTGLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEKPEGDITQVNEKTIPDHDILCAGFPCQAFSISGKQKGFEDSRGTLFFDIARIVREKKPKVVFMENVKNFASHDNGNTLEVVKNTMNELDYSFHAKVLNALDYGIPQKRERIYMICFRNDLNIQNFQFPKPFELNTFVKDLLLPDSEVEHLVIDRKDLVMTNQEIEQTTPKTVRLGIVGKGGQGERIYSTRGIAITLSAYGGGIFAKTGGYLVNGKTRKLHPRECARVMGYPDSYKVHPSTSQAYKQFGNSVVINVLQYIAYNIGSSLNFKPY 327
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       

Chain C from PDB  Type:DNA  Length:12
                                            
                 8mht C 402 GTCAGCGCATGG 413
                                   411  

Chain D from PDB  Type:DNA  Length:12
                                            
                 8mht D 422 CCATGxGCTGAC 433
                                 | 431  
                               427-DU   

   Legend:   → Mismatch (orange background)
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    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit

(-) CATH Domains  (2, 2)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 8MHT)

(-) Gene Ontology  (6, 6)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        MTH1_HAEPH | P0510210mh 1fjx 1hmy 1m0e 1mht 1skm 1svu 2c7o 2c7p 2c7q 2c7r 2hmy 2hr1 2i9k 2uyc 2uyh 2uz4 2z6a 2z6q 2z6u 2zcj 3eeo 3mht 4mht 5ciy 5mht 6mht 7mht 9mht

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 8MHT)