Chain A from PDB Type:PROTEIN Length:230
aligned with T2E5_ECOLX | P04390 from UniProtKB/Swiss-Prot Length:245
Alignment length:243
12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242
T2E5_ECOLX 3 LRSDLINALYDENQKYDVCGIISAEGKIYPLGSDTKVLSTIFELFSRPIINKIAEKHGYIVEEPKQQNHYPDFTLYKPSEPNKKIAIDIKTTYTNKENEKIKFTLGGYTSFIRNNTKNIVYPFDQYIAHWIIGYVYTRVATRKSSLKTYNINELNEIPKPYKGVKVFLQDKWVIAGDLAGSGNTTNIGSIHAHYKDFVEGKGIFDSEDEFLDYWRNYERTSQLRNDKYNNISEYRNWIYRGRK 245
SCOP domains d1bssa_ A: Restriction endonuclease EcoRV SCOP domains
CATH domains 1bssA00 A:3-245 [code=3.40.600.10, no name defined] CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author (1) hhhhhhhhhhhhhh----------------...hhhhhhhhhhhhhhhhhhhhhhhh..eee..-.......eeee.......eeeeeeeeeee-----......................hhh.eeeeeeeeeeee..-------......hhhhh......eeeeeeehhhh..................hhhhhhhh.....hhhhhhhhhhh...hhhhhhhhh.hhhhhhhhhhh... Sec.struct. author (1)
Sec.struct. author (2) -----eeeeeeeeeeeeeeeeeeeeeeeee--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Sec.struct. author (2)
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1bss A 3 LRSDLINALYDENQKYDVCGIISAEGKIYPLGSDTKVLSTIFELFSRPIINKIAEKHGYIVEEP-QQNHYPDFTLYKPSEPNKKIAIDIKATYT-----KIKFTLGGYTSFIRNNTKNIVYPFDQYIAHWIIGYVYTRV-------KTYNINELNEIPKPYKGVKVFLQDKWVIAGDLAGSGNTTNIGSIHAHYKDFVEGKGIFDSEDEFLDYWRNYERTSQLRNDKYNNISEYRNWIYRGRK 245
12 22 32 42 52 62 | | 72 82 92 | 102 112 122 132 |- |152 162 172 182 192 202 212 222 232 242
66 | 96 102 141 149
68
Chain B from PDB Type:PROTEIN Length:228
aligned with T2E5_ECOLX | P04390 from UniProtKB/Swiss-Prot Length:245
Alignment length:244
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241
T2E5_ECOLX 2 SLRSDLINALYDENQKYDVCGIISAEGKIYPLGSDTKVLSTIFELFSRPIINKIAEKHGYIVEEPKQQNHYPDFTLYKPSEPNKKIAIDIKTTYTNKENEKIKFTLGGYTSFIRNNTKNIVYPFDQYIAHWIIGYVYTRVATRKSSLKTYNINELNEIPKPYKGVKVFLQDKWVIAGDLAGSGNTTNIGSIHAHYKDFVEGKGIFDSEDEFLDYWRNYERTSQLRNDKYNNISEYRNWIYRGRK 245
SCOP domains d1bssb_ B: Restriction endonuclease EcoRV SCOP domains
CATH domains 1bssB00 B:2 -245 [code=3.40.600.10, no name defined] CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhh.------...eee....eeee....hhhhhhhhhhhhhhhhhhhhhhh..eee..........eeee.......eeeeeeeeeee.----......................hhh.eeeeeeeeeeeee------...eee.hhhhhh...eeeeeeeeeehhhh..................hhhhhhhh.....hhhhhhhhhhh...hhhhhh....hhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1bss B 2 SLRSDLINALY------DVCGIISAEGKIYPLGSDTKVLSTIFELFSRPIINKIAEKHGYIVEEPKQQNHYPDFTLYKPSEPNKKIAIDIKATYTN----KIKFTLGGYTSFIRNNTKNIVYPFDQYIAHWIIGYVYTR------SLKTYNINELNEIPKPYKGVKVFLQDKWVIAGDLAGSGNTTNIGSIHAHYKDFVEGKGIFDSEDEFLDYWRNYERTSQLRNDKYNNISEYRNWIYRGRK 245
11| |21 31 41 51 61 71 81 91 | -| 111 121 131 |- | 151 161 171 181 191 201 211 221 231 241
12 19 97 102 140 147
Chain C from PDB Type:DNA Length:11
1bss C 901 AAAGATATCTT 911
910
Chain D from PDB Type:DNA Length:11
1bss D 801 AAAGATATCTT 811
810
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(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |