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(-) Description

Title :  STRUCTURE OF CCA OLIGONUCLEOTIDE BOUND TO THE TRNA BINDING SITES OF THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
 
Authors :  T. M. Schmeing, P. B. Moore, T. A. Steitz
Date :  27 Aug 03  (Deposition) - 11 Nov 03  (Release) - 17 Nov 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.90
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,0,1,2,3,4,5,9
Keywords :  Ribosome 50S, Protein-Protein Complex, Rna-Rna Complex, Protein-Rna Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  T. M. Schmeing, P. B. Moore, T. A. Steitz
Structures Of Deacylated Trna Mimics Bound To The E Site Of The Large Ribosomal Subunit
Rna V. 9 1345 2003
PubMed-ID: 14561884  |  Reference-DOI: 10.1261/RNA.5120503
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - 23S RIBOSOMAL RNA
    Chains0
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 2 - 5S RIBOSOMAL RNA
    Chains9
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 3 - OLIGONUCLEOTIDE CCA
    Chains3, 4, 5
    EngineeredYES
    SyntheticYES
 
Molecule 4 - 50S RIBOSOMAL PROTEIN L2P
    ChainsA
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymHMAL2, HL4
 
Molecule 5 - 50S RIBOSOMAL PROTEIN L3P
    ChainsB
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymHMAL3, HL1
 
Molecule 6 - 50S RIBOSOMAL PROTEIN L4E
    ChainsC
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymHMAL4, HL6
 
Molecule 7 - 50S RIBOSOMAL PROTEIN L5P
    ChainsD
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymHMAL5, HL13
 
Molecule 8 - 50S RIBOSOMAL PROTEIN L6P
    ChainsE
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymHMAL6, HL10
 
Molecule 9 - 50S RIBOSOMAL PROTEIN L7AE
    ChainsF
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymHS6
 
Molecule 10 - 50S RIBOSOMAL PROTEIN L10E
    ChainsG
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymACIDIC RIBOSOMAL PROTEIN P0 HOMOLOG, HMAL10
 
Molecule 11 - L10 RIBOSOMAL PROTEIN
    ChainsH
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 12 - 50S RIBOSOMAL PROTEIN L13P
    ChainsI
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 13 - 50S RIBOSOMAL PROTEIN L14P
    ChainsJ
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymHMAL13
 
Molecule 14 - 50S RIBOSOMAL PROTEIN L15P
    ChainsK
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymHMAL15, HL9
 
Molecule 15 - L15 RIBOSOMAL PROTEIN
    ChainsL
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 16 - 50S RIBOSOMAL PROTEIN L18P
    ChainsM
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymHMAL18, HL12
 
Molecule 17 - 50S RIBOSOMAL PROTEIN L18E
    ChainsN
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymHL29, L19
 
Molecule 18 - 50S RIBOSOMAL PROTEIN L19E
    ChainsO
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymHMAL19, HL24
 
Molecule 19 - 50S RIBOSOMAL PROTEIN L21E
    ChainsP
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymHL31
 
Molecule 20 - 50S RIBOSOMAL PROTEIN L22P
    ChainsQ
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymHMAL22, HL23
 
Molecule 21 - 50S RIBOSOMAL PROTEIN L23P
    ChainsR
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymHMAL23, HL25, L21
 
Molecule 22 - 50S RIBOSOMAL PROTEIN L24P
    ChainsS
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymHMAL24, HL16, HL15
 
Molecule 23 - 50S RIBOSOMAL PROTEIN L24E
    ChainsT
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymHL21/HL22
 
Molecule 24 - 50S RIBOSOMAL PROTEIN L29P
    ChainsU
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymHMAL29, HL33
 
Molecule 25 - 50S RIBOSOMAL PROTEIN L30P
    ChainsV
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymHMAL30, HL20, HL16
 
Molecule 26 - 50S RIBOSOMAL PROTEIN L31E
    ChainsW
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymL34, HL30
 
Molecule 27 - 50S RIBOSOMAL PROTEIN L32E
    ChainsX
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymHL5
 
Molecule 28 - L37AE 50S RIBOSOMAL PROTEIN
    ChainsY
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 29 - 50S RIBOSOMAL PROTEIN L37E
    ChainsZ
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymL35E
 
Molecule 30 - 50S RIBOSOMAL PROTEIN L39E
    Chains1
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymHL39E, HL46E
 
Molecule 31 - 50S RIBOSOMAL PROTEIN L44E
    Chains2
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymLA, HLA

 Structural Features

(-) Chains, Units

  123456789101112131415161718192021222324252627282930313233
Asymmetric/Biological Unit ABCDEFGHIJKLMNOPQRSTUVWXYZ0123459

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (5, 231)

Asymmetric/Biological Unit (5, 231)
No.NameCountTypeFull Name
1CD5Ligand/IonCADMIUM ION
2CL22Ligand/IonCHLORIDE ION
3K2Ligand/IonPOTASSIUM ION
4MG116Ligand/IonMAGNESIUM ION
5NA86Ligand/IonSODIUM ION

(-) Sites  (231, 231)

Asymmetric Unit (231, 231)
No.NameEvidenceResiduesDescription
001AC1SOFTWAREG 0:2482 , A 0:2483 , C 0:2533 , C 0:2534 , HOH 0:3121 , HOH 0:7163 , HOH 0:8700BINDING SITE FOR RESIDUE MG 0 8001
002AC2SOFTWAREU 0:626 , G 0:627 , A 0:2483 , C 0:2534 , HOH 0:3817 , HOH 0:7142 , HOH 0:7143BINDING SITE FOR RESIDUE MG 0 8002
003AC3SOFTWAREA 0:876 , G 0:877 , G 0:2623 , A 0:2624 , HOH 0:3172 , HOH 0:8543 , HOH 0:9334BINDING SITE FOR RESIDUE MG 0 8003
004AC4SOFTWAREG 0:456 , A 0:459 , HOH 0:3286 , HOH 0:7149 , HOH 0:8569 , HOH 0:9287BINDING SITE FOR RESIDUE MG 0 8004
005AC5SOFTWAREA 0:1836 , U 0:1838 , A 0:1839 , HOH 0:3117 , HOH 0:7164 , HOH 0:7165BINDING SITE FOR RESIDUE MG 0 8005
006AC6SOFTWAREU 0:821 , C 0:822 , G 0:854 , G 0:856 , HOH 0:3123 , HOH 0:3259 , HOH 0:9317BINDING SITE FOR RESIDUE MG 0 8006
007AC7SOFTWAREU 0:832 , A 0:1839 , A 0:1840 , HOH 0:7154 , HOH 0:8529 , HOH 0:9862BINDING SITE FOR RESIDUE MG 0 8007
008AC8SOFTWAREU 0:919 , C 0:2464 , A 0:2465 , HOH 0:3134 , HOH 0:7157 , HOH 0:7237BINDING SITE FOR RESIDUE MG 0 8008
009AC9SOFTWAREU 0:2610 , G 0:2611 , A 0:2612 , HOH 0:3244 , HOH 0:6829 , HOH 0:7158 , HOH 0:7159 , NA 0:8358 , HOH 0:8859BINDING SITE FOR RESIDUE MG 0 8009
010BC1SOFTWAREG 0:836 , U 0:2615 , HOH 0:3340 , HOH 0:8886 , GLN B:230BINDING SITE FOR RESIDUE MG 0 8010
011BC2SOFTWAREG 0:824 , G 0:854BINDING SITE FOR RESIDUE MG 0 8011
012BC3SOFTWAREU 0:27 , G 0:28 , HOH 0:3153 , HOH 0:7238 , HOH 0:8561 , HOH 0:9158 , HOH 0:9733BINDING SITE FOR RESIDUE MG 0 8012
013BC4SOFTWAREG 0:877 , G 0:2623 , HOH 0:3148 , HOH 0:3160 , HOH 0:8542 , HOH A:8620BINDING SITE FOR RESIDUE MG 0 8013
014BC5SOFTWAREG 0:2102 , G 0:2537 , HOH 0:3165 , HOH 0:3659 , HOH 0:7140 , HOH 0:8555BINDING SITE FOR RESIDUE MG 0 8014
015BC6SOFTWAREA 0:844 , A 0:1689 , HOH 0:3125 , HOH 0:7173 , HOH 0:8527 , HOH 0:8546BINDING SITE FOR RESIDUE MG 0 8015
016BC7SOFTWAREA 0:1504 , A 0:1678 , C 0:1679 , HOH 0:3251 , HOH 0:7166 , HOH 0:7167BINDING SITE FOR RESIDUE MG 0 8016
017BC8SOFTWAREG 0:456 , HOH 0:3126 , HOH 0:3443 , HOH 0:6792 , HOH 0:7150 , HOH 0:8937BINDING SITE FOR RESIDUE MG 0 8017
018BC9SOFTWAREA 0:1291 , G 0:1292 , HOH 0:3119 , HOH 0:6865 , HOH 0:7239 , HOH 0:9726BINDING SITE FOR RESIDUE MG 0 8018
019CC1SOFTWAREA 0:2011 , HOH 0:3647 , HOH 0:6645 , HOH 0:7168 , HOH 0:7169 , HOH 0:7170BINDING SITE FOR RESIDUE MG 0 8019
020CC2SOFTWAREC 0:1830 , HOH 0:7153 , HOH 0:7171 , HOH 0:8644 , HOH 0:8647 , HOH 0:8721BINDING SITE FOR RESIDUE MG 0 8020
021CC3SOFTWAREG 0:2304 , HOH 0:3144 , HOH 0:3145 , HOH 0:7155 , HOH 0:7156 , HOH 0:9469BINDING SITE FOR RESIDUE MG 0 8021
022CC4SOFTWAREG 0:2097 , U 0:2539 , G 0:2540 , HOH 0:3371 , HOH 0:7160 , HOH 0:8633 , HOH 0:8978BINDING SITE FOR RESIDUE MG 0 8022
023CC5SOFTWAREG 0:2617 , G 0:2618 , HOH 0:3132 , HOH 0:3388 , HOH 0:7162BINDING SITE FOR RESIDUE MG 0 8023
024CC6SOFTWAREA 0:1381 , HOH W:4092 , HOH W:7830BINDING SITE FOR RESIDUE MG 0 8024
025CC7SOFTWAREU 0:1120 , G 0:1121 , HOH 0:3665 , HOH 0:7176 , HOH 0:7241BINDING SITE FOR RESIDUE MG 0 8025
026CC8SOFTWAREC 0:2608 , G 0:2609 , U 0:2610 , HOH 0:7177 , HOH 0:7178 , HOH 0:7179 , HOH 0:8915BINDING SITE FOR RESIDUE MG 0 8026
027CC9SOFTWAREC 0:240 , U 0:268 , G 0:269 , HOH 0:3374 , HOH 0:3510 , HOH 0:3652 , HOH L:8645BINDING SITE FOR RESIDUE MG 0 8027
028DC1SOFTWAREA 0:1448 , U 0:1677 , HOH 0:3183 , HOH 0:3204 , HOH 0:3216 , HOH 0:7181 , HOH 0:9095BINDING SITE FOR RESIDUE MG 0 8028
029DC2SOFTWAREU 0:1503 , A 0:1504 , C 0:1679 , HOH 0:7182 , HOH 0:7183 , HOH 0:7184BINDING SITE FOR RESIDUE MG 0 8029
030DC3SOFTWAREU 0:1748 , U 0:1749 , HOH 0:3146 , HOH 0:7151 , HOH 0:7152 , HOH 0:7161BINDING SITE FOR RESIDUE MG 0 8030
031DC4SOFTWAREU 0:777 , C 0:778 , HOH 0:7186 , HOH 0:7187 , NA 0:8325 , HOH 0:9781 , HOH Z:8456BINDING SITE FOR RESIDUE MG 0 8031
032DC5SOFTWAREU 0:2115 , HOH 0:3231 , HOH 0:3292 , HOH 0:3685 , HOH 0:9496 , HOH A:8621BINDING SITE FOR RESIDUE MG 0 8032
033DC6SOFTWAREA 0:1747 , U 0:1748 , U 0:1749 , G 0:2585 , HOH 0:3318 , HOH 0:9195BINDING SITE FOR RESIDUE MG 0 8033
034DC7SOFTWAREA 0:2302 , A 0:2303 , HOH 0:3149 , HOH 0:3274 , HOH 0:4346 , HOH 0:7188BINDING SITE FOR RESIDUE MG 0 8034
035DC8SOFTWAREG 0:1484 , HOH 0:3221 , HOH 0:7189 , HOH 0:7190 , HOH 0:7243 , HOH 0:7244BINDING SITE FOR RESIDUE MG 0 8035
036DC9SOFTWAREG 0:956 , HOH 0:3175 , HOH 0:7191 , HOH 0:7192 , HOH 0:7193 , HOH 0:8891BINDING SITE FOR RESIDUE MG 0 8036
037EC1SOFTWAREA 0:2553 , A 0:2576 , HOH 0:3154 , HOH 0:7245 , HOH 0:8602 , HOH 0:9641 , HOH 0:9716BINDING SITE FOR RESIDUE MG 0 8037
038EC2SOFTWAREHOH 0:3130 , HOH 0:3155 , HOH 0:3176 , HOH 0:3178 , HOH 0:7195 , HOH 0:8807BINDING SITE FOR RESIDUE MG 0 8038
039EC3SOFTWAREA 0:114 , U 0:115 , HOH 0:3463 , HOH 0:4578 , HOH 0:7197 , HOH 0:9416BINDING SITE FOR RESIDUE MG 0 8039
040EC4SOFTWAREU 0:392 , HOH 0:3293 , HOH 0:4123 , HOH 0:7247 , HOH 0:7248 , HOH 0:9208BINDING SITE FOR RESIDUE MG 0 8040
041EC5SOFTWAREC 0:195 , G 0:196 , A 0:227 , C 0:228 , HOH 0:3604 , HOH 0:3696BINDING SITE FOR RESIDUE MG 0 8041
042EC6SOFTWAREU 0:1309 , U 0:1346 , HOH 0:3163 , HOH 0:3906 , HOH 0:7198 , HOH 0:8959BINDING SITE FOR RESIDUE MG 0 8042
043EC7SOFTWAREG 0:816 , G 0:817 , HOH 0:6816 , HOH 0:7249 , MG 0:8106 , HOH 0:9321BINDING SITE FOR RESIDUE MG 0 8043
044EC8SOFTWAREC 0:2048 , C 0:2088 , A 0:2089 , GLY Q:65BINDING SITE FOR RESIDUE MG 0 8044
045EC9SOFTWAREG 0:1979 , HOH 0:7200 , HOH 0:7250 , HOH 0:7251 , HOH 0:7252BINDING SITE FOR RESIDUE MG 0 8045
046FC1SOFTWAREG 0:1794 , HOH 0:6702 , HOH 0:7253 , HOH 0:7254BINDING SITE FOR RESIDUE MG 0 8046
047FC2SOFTWAREA 0:1098 , HOH 0:3978 , HOH 0:5708 , HOH 0:7267BINDING SITE FOR RESIDUE MG 0 8047
048FC3SOFTWAREA 0:2746 , U 0:2749 , G 0:2750 , HOH 0:5327 , HOH 0:5699 , HOH 0:7255BINDING SITE FOR RESIDUE MG 0 8048
049FC4SOFTWAREG 0:2421 , C 0:2423 , HOH 0:7256BINDING SITE FOR RESIDUE MG 0 8049
050FC5SOFTWAREC 0:2248 , HOH 0:6724BINDING SITE FOR RESIDUE MG 0 8050
051FC6SOFTWAREG 0:641 , A 0:1355 , HOH 0:3600 , HOH 0:7201 , HOH 0:7202BINDING SITE FOR RESIDUE MG 0 8051
052FC7SOFTWAREU 0:1125 , C 0:1129 , HOH 0:3128 , HOH 0:3357 , G 9:3092 , HOH 9:8390 , HOH 9:8530BINDING SITE FOR RESIDUE MG 0 8052
053FC8SOFTWAREG 0:471 , HOH 0:3886 , HOH 0:5073 , HOH 0:8726 , HOH 0:8766BINDING SITE FOR RESIDUE MG 0 8053
054FC9SOFTWAREC 0:162 , U 0:163 , U 0:2276 , HOH 0:7203 , HOH 0:8955BINDING SITE FOR RESIDUE MG 0 8054
055GC1SOFTWAREHOH 0:3298 , HOH 0:7106 , HOH B:8623 , HOH B:8663 , HOH B:8664 , HOH T:2221BINDING SITE FOR RESIDUE MG 0 8055
056GC2SOFTWAREU 0:1883 , U 0:2012 , G 0:2013 , HOH 0:4488 , GLN A:207 , HOH A:8624BINDING SITE FOR RESIDUE MG 0 8057
057GC3SOFTWAREG 0:2013 , HOH 0:7204 , HOH 0:7205 , HOH A:8622 , HOH A:8624BINDING SITE FOR RESIDUE MG 0 8058
058GC4SOFTWAREG 0:2618 , HOH 0:3227 , HOH 0:3547 , HOH 0:7162 , HOH 0:8560 , HOH 0:8564BINDING SITE FOR RESIDUE MG 0 8059
059GC5SOFTWAREG 0:175 , U 0:224 , G 0:393 , HOH 0:7206 , HOH 0:7207 , HOH 0:7208 , HOH 0:8693BINDING SITE FOR RESIDUE MG 0 8060
060GC6SOFTWAREA 0:1369 , U 0:2650 , HOH 0:7209 , HOH 0:7210 , HOH 0:7211 , HOH 0:9327BINDING SITE FOR RESIDUE MG 0 8061
061GC7SOFTWAREG 0:1489 , G 0:1491 , HOH 0:3137 , HOH 0:3457 , HOH 0:5612 , HOH 0:8918BINDING SITE FOR RESIDUE MG 0 8062
062GC8SOFTWAREHOH 0:3677 , HOH 0:6422 , HOH 0:6836 , HOH 0:7148 , HOH 0:7220 , HOH 0:7269BINDING SITE FOR RESIDUE MG 0 8063
063GC9SOFTWAREU 0:2277 , U 0:2278 , G 0:2471 , HOH 0:3265 , HOH 0:9110 , HOH 0:9425BINDING SITE FOR RESIDUE MG 0 8064
064HC1SOFTWAREA 0:1845 , U 0:1846 , G 0:1884 , HOH 0:7213 , ASN A:188BINDING SITE FOR RESIDUE MG 0 8067
065HC2SOFTWAREA 0:2568 , HOH 0:3257 , HOH 0:4300 , HOH 0:5662 , HOH 0:7270 , HOH E:920BINDING SITE FOR RESIDUE MG 0 8068
066HC3SOFTWAREA 0:166 , G 0:219 , HOH 0:3319 , HOH 0:4437 , HOH 0:8645 , HOH K:8556BINDING SITE FOR RESIDUE MG 0 8070
067HC4SOFTWAREC 0:1818 , HOH 0:3610 , HOH 0:5496 , HOH 0:6820 , HOH 0:6952 , HOH 0:7218 , HOH 0:7219BINDING SITE FOR RESIDUE MG 0 8071
068HC5SOFTWAREU 0:954 , C 0:2298 , HOH 0:3492 , HOH 0:6815 , HOH 0:7217 , HOH 0:9738 , HOH P:7872BINDING SITE FOR RESIDUE MG 0 8072
069HC6SOFTWAREA 0:1286 , A 0:1287 , HOH 0:7214 , HOH 0:7215 , HOH V:7873 , HOH V:7874BINDING SITE FOR RESIDUE MG 0 8074
070HC7SOFTWAREA 0:907 , A 0:908 , HOH 0:3143 , HOH 0:3415 , HOH 0:4415 , HOH 0:7216BINDING SITE FOR RESIDUE MG 0 8075
071HC8SOFTWAREHOH 0:6269 , HOH 0:7222 , HOH 0:7223 , HOH 0:7271 , HOH 0:7272 , HOH 1:7875BINDING SITE FOR RESIDUE MG 0 8076
072HC9SOFTWAREC 0:880 , U 0:883 , HOH 0:3127 , HOH 0:7224 , HOH 0:7225 , HOH 0:8765BINDING SITE FOR RESIDUE MG 0 8077
073IC1SOFTWAREA 0:165 , A 0:167 , C 0:168 , HOH 0:3116 , HOH 0:3122 , HOH 0:3133BINDING SITE FOR RESIDUE MG 0 8079
074IC2SOFTWAREA 0:1684 , U 0:1724 , HOH 0:3700 , HOH 0:3976 , HOH 0:7226 , HOH 0:7274BINDING SITE FOR RESIDUE MG 0 8080
075IC3SOFTWAREC 0:1420 , C 0:1421 , G 0:1438 , HOH 0:3595 , HOH 0:9131BINDING SITE FOR RESIDUE MG 0 8081
076IC4SOFTWAREC 0:1436 , A 0:1437 , HOH 0:4631 , HOH 0:4715 , HOH 0:7283 , HOH 0:7284 , HOH 0:8621BINDING SITE FOR RESIDUE MG 0 8082
077IC5SOFTWAREA 0:1754 , HOH 0:3212 , HOH 0:3648 , HOH 0:5791 , HOH 0:7227 , HOH 0:7275BINDING SITE FOR RESIDUE MG 0 8083
078IC6SOFTWAREA 0:1742 , G 0:1745 , HOH 0:3140 , HOH 0:7228 , HOH 0:8775 , HOH 0:8897 , HOH 0:9264BINDING SITE FOR RESIDUE MG 0 8084
079IC7SOFTWAREG 0:2617 , G 0:2618 , HOH 0:3291 , HOH 0:3848 , HOH 0:3969 , HOH 0:8560 , HOH 0:9122BINDING SITE FOR RESIDUE MG 0 8085
080IC8SOFTWAREA 0:532 , U 0:533 , HOH 0:3237 , HOH 0:3473 , HOH 0:7229 , HOH 0:7230BINDING SITE FOR RESIDUE MG 0 8086
081IC9SOFTWAREA 0:682 , G 0:683 , HOH 0:3182 , HOH 0:7285BINDING SITE FOR RESIDUE MG 0 8087
082JC1SOFTWAREG 0:2540 , G 0:2611 , HOH 0:3786 , NA 0:8339 , HOH 0:8586 , HOH 0:8820 , HOH 0:9551BINDING SITE FOR RESIDUE MG 0 8088
083JC2SOFTWAREC 0:515 , A 0:516 , U 0:517 , G 0:518 , HOH 0:7231 , HOH 0:7276 , HOH 0:7277BINDING SITE FOR RESIDUE MG 0 8089
084JC3SOFTWAREA 0:2103 , U 0:2478 , A 0:2479 , HOH 0:3120 , HOH 0:3301 , HOH 0:5426BINDING SITE FOR RESIDUE MG 0 8090
085JC4SOFTWAREG 0:918 , HOH 0:5909 , HOH 0:7232 , HOH 0:8616 , HOH 0:9065 , HOH 0:9830BINDING SITE FOR RESIDUE MG 0 8091
086JC5SOFTWAREC 0:1844 , HOH 0:3151 , HOH 0:3166 , HOH 0:7278 , HOH 0:8908BINDING SITE FOR RESIDUE MG 0 8092
087JC6SOFTWAREG 0:627 , A 0:1070 , G 0:1071 , HOH 0:3156 , HOH 0:3187 , HOH 0:3228 , HOH 0:9200BINDING SITE FOR RESIDUE MG 0 8093
088JC7SOFTWAREU 0:1096 , C 0:1257 , G 0:1258 , HOH 0:7233 , HOH 0:7279BINDING SITE FOR RESIDUE MG 0 8094
089JC8SOFTWAREG 0:1848 , G 0:1849 , HOH 0:3169 , HOH 0:3205 , HOH 0:3335 , HOH 0:3366 , MG 0:8116BINDING SITE FOR RESIDUE MG 0 8096
090JC9SOFTWAREG 0:863 , U 0:864 , HOH 0:3177 , HOH 0:3181 , HOH 0:9844BINDING SITE FOR RESIDUE MG 0 8097
091KC1SOFTWAREA 0:907 , HOH 0:3189 , HOH 0:3253 , HOH 0:9450 , HOH 0:9873 , HOH X:8569BINDING SITE FOR RESIDUE MG 0 8098
092KC2SOFTWAREA 0:2612 , U 0:2648 , HOH 0:3173 , HOH 0:3184 , HOH 0:9521BINDING SITE FOR RESIDUE MG 0 8099
093KC3SOFTWAREG 0:2080 , HOH 0:3271 , HOH 0:3746 , HOH 0:4970 , HOH 0:7234BINDING SITE FOR RESIDUE MG 0 8100
094KC4SOFTWAREU 0:2107 , C 0:2281 , U 0:2282 , HOH 0:3252 , HOH 0:4103BINDING SITE FOR RESIDUE MG 0 8101
095KC5SOFTWAREA 0:2434 , U 0:2458 , HOH 0:7288 , HOH 0:8778 , HOH 0:9399 , HOH 2:8518BINDING SITE FOR RESIDUE MG 0 8102
096KC6SOFTWAREG 0:2578 , G 0:2579 , HOH 0:7280BINDING SITE FOR RESIDUE MG 0 8103
097KC7SOFTWAREC 0:2104 , C 0:2105 , HOH 0:7145 , HOH 0:7147BINDING SITE FOR RESIDUE MG 0 8104
098KC8SOFTWAREG 0:817 , HOH 0:3105 , HOH 0:6816 , HOH 0:7249 , MG 0:8043 , HOH O:5319BINDING SITE FOR RESIDUE MG 0 8106
099KC9SOFTWAREC 0:1105 , A 0:1106 , A 0:1107 , HOH 0:7257 , HOH 0:7258 , HOH 0:7259 , HOH 0:7260BINDING SITE FOR RESIDUE MG 0 8107
100LC1SOFTWAREG 0:2000 , HOH 0:5541 , HOH 0:6891 , HOH 0:7262 , HOH 0:7263 , HOH 0:7264BINDING SITE FOR RESIDUE MG 0 8108
101LC2SOFTWAREU 0:903 , U 0:904 , A 0:1357 , HOH 0:3425 , HOH 0:4864 , HOH 0:5476 , HOH 0:9028BINDING SITE FOR RESIDUE MG 0 8110
102LC3SOFTWAREG 0:2609 , U 0:2610 , HOH 0:3202 , HOH 0:3226 , HOH 0:5059 , HOH 0:9804 , HOH B:8607BINDING SITE FOR RESIDUE MG 0 8111
103LC4SOFTWAREA 0:187 , HOH 0:3272 , HOH 0:8651 , HOH 0:8856 , HOH 0:9088BINDING SITE FOR RESIDUE MG 0 8112
104LC5SOFTWAREA 0:2112 , HOH 0:3258 , HOH 0:3423 , HOH 0:4369 , HOH 0:5571 , HOH 0:5832 , HOH 0:9110BINDING SITE FOR RESIDUE MG 0 8113
105LC6SOFTWAREHOH 0:3781 , HOH 0:3794 , HOH 0:5841 , HOH 0:6027 , HOH 0:6153 , HOH 0:6275 , HOH 0:7281BINDING SITE FOR RESIDUE MG 0 8115
106LC7SOFTWAREU 0:1850 , HOH 0:3169 , HOH 0:3194 , HOH 0:3366 , HOH 0:3413 , HOH 0:6153 , MG 0:8096BINDING SITE FOR RESIDUE MG 0 8116
107LC8SOFTWAREA 0:1840 , C 0:1841 , A 0:2022 , HOH 0:4117 , HOH 0:5985 , HOH 0:8747BINDING SITE FOR RESIDUE MG 0 8117
108LC9SOFTWAREG 0:2102 , G 0:2482 , C 0:2536BINDING SITE FOR RESIDUE K 0 8201
109MC1SOFTWAREC 0:162 , U 0:163 , U 0:172 , HOH 0:8537 , HOH 0:8634 , ARG L:82BINDING SITE FOR RESIDUE K 0 8202
110MC2SOFTWAREC 0:1069 , G 0:1072 , G 0:1087 , HOH 0:4449 , HOH 0:9675 , HOH 0:9706BINDING SITE FOR RESIDUE NA 0 8301
111MC3SOFTWAREG 0:1119 , U 0:1120 , G 0:1121 , U 0:1122 , HOH 0:5140BINDING SITE FOR RESIDUE NA 0 8302
112MC4SOFTWAREA 0:643 , G 0:644 , U 0:904 , C 0:1353 , G 0:1354 , HOH 0:9767 , ARG K:8BINDING SITE FOR RESIDUE NA 0 8303
113MC5SOFTWAREA 0:630 , A 0:631 , A 0:2074 , HOH 0:3586 , HOH 0:4182 , HOH 0:5238BINDING SITE FOR RESIDUE NA 0 8305
114MC6SOFTWAREG 0:2092 , G 0:2093 , G 0:2094 , A 0:2649BINDING SITE FOR RESIDUE NA 0 8306
115MC7SOFTWAREC 0:40 , G 0:41 , A 0:442 , C 0:443BINDING SITE FOR RESIDUE NA 0 8307
116MC8SOFTWAREC 0:1394 , U 0:1432 , G 0:1433 , U 0:1724 , HOH 0:9911BINDING SITE FOR RESIDUE NA 0 8308
117MC9SOFTWAREA 0:2577 , G 0:2578 , G 0:2579 , HOH 0:3988BINDING SITE FOR RESIDUE NA 0 8310
118NC1SOFTWAREG 0:2524 , G 0:2525 , HOH 0:3081 , HOH 0:4133BINDING SITE FOR RESIDUE NA 0 8311
119NC2SOFTWAREG 0:2399 , HOH 0:3336 , HOH 0:4547 , HOH 0:4597 , HOH 0:5935 , HOH 0:9458BINDING SITE FOR RESIDUE NA 0 8313
120NC3SOFTWAREU 0:2541 , U 0:2607 , HOH 0:8857 , HOH 0:9636 , TRP B:242BINDING SITE FOR RESIDUE NA 0 8314
121NC4SOFTWAREA 0:165 , A 0:166 , A 0:167BINDING SITE FOR RESIDUE NA 0 8315
122NC5SOFTWAREC 0:896 , A 0:897 , HOH 0:5752 , HOH 0:7081 , HOH 0:8551BINDING SITE FOR RESIDUE NA 0 8316
123NC6SOFTWAREG 0:1416 , G 0:1417 , HOH 0:8803 , TRP 1:42 , ASN 1:45 , HOH 1:4135BINDING SITE FOR RESIDUE NA 0 8317
124NC7SOFTWAREG 0:2543 , G 0:2544 , HOH 0:3429 , NA 0:8320 , HOH 0:9963BINDING SITE FOR RESIDUE NA 0 8318
125NC8SOFTWAREA 0:2465 , G 0:2466 , HOH 0:3756 , HOH 0:5489 , HOH 0:8583 , ASP K:36 , HOH K:8537BINDING SITE FOR RESIDUE NA 0 8319
126NC9SOFTWAREG 0:2543 , G 0:2544 , U 0:2615 , NA 0:8318 , HOH 0:8580 , HOH 0:8611 , HOH 0:9255BINDING SITE FOR RESIDUE NA 0 8320
127OC1SOFTWAREG 0:836 , U 0:837 , A 0:1736 , A 0:1737 , ARG B:229BINDING SITE FOR RESIDUE NA 0 8321
128OC2SOFTWAREC 0:2287 , ARG H:112BINDING SITE FOR RESIDUE NA 0 8322
129OC3SOFTWAREG 0:885 , A 0:2112 , G 0:2113 , C 0:2475 , HOH 0:3963BINDING SITE FOR RESIDUE NA 0 8323
130OC4SOFTWAREA 0:45 , C 0:130 , U 0:146 , G 0:147 , HOH 0:3626 , HOH 0:6565 , HOH 0:9013BINDING SITE FOR RESIDUE NA 0 8324
131OC5SOFTWAREA 0:776 , U 0:777 , U 0:779 , HOH 0:7056 , MG 0:8031 , HOH 0:9146 , HOH 0:9781BINDING SITE FOR RESIDUE NA 0 8325
132OC6SOFTWAREG 0:1971 , G 0:2009 , A 0:2010 , U 0:2012BINDING SITE FOR RESIDUE NA 0 8326
133OC7SOFTWAREU 0:821 , C 0:853 , G 0:854 , U 0:1831 , HOH 0:8559 , HOH 0:9244 , HOH 0:9710BINDING SITE FOR RESIDUE NA 0 8327
134OC8SOFTWAREG 0:56 , A 0:59 , A 0:60 , G 0:61 , HOH 0:5905BINDING SITE FOR RESIDUE NA 0 8328
135OC9SOFTWAREG 0:66 , U 0:107 , U 0:108 , HOH 0:6003BINDING SITE FOR RESIDUE NA 0 8329
136PC1SOFTWAREC 0:141 , G 0:142 , HOH 0:8758BINDING SITE FOR RESIDUE NA 0 8330
137PC2SOFTWAREU 0:170 , C 0:171 , C 0:218 , G 0:221BINDING SITE FOR RESIDUE NA 0 8331
138PC3SOFTWAREG 0:386 , G 0:387 , G 0:388 , C 0:401 , U 0:402 , HOH 0:6486BINDING SITE FOR RESIDUE NA 0 8332
139PC4SOFTWAREC 0:1894 , U 0:1897 , G 0:1898 , U 0:1939BINDING SITE FOR RESIDUE NA 0 8333
140PC5SOFTWAREC 0:1894 , A 0:1895 , G 0:1896 , U 0:1897 , HOH 0:4720BINDING SITE FOR RESIDUE NA 0 8334
141PC6SOFTWAREC 0:621 , G 0:622 , U 0:623 , A 0:628 , A 0:630 , HOH 0:9381BINDING SITE FOR RESIDUE NA 0 8335
142PC7SOFTWAREG 0:1706 , G 0:1707 , HOH 0:4806 , HOH 0:6750 , HOH 0:7083 , HOH 0:9430BINDING SITE FOR RESIDUE NA 0 8336
143PC8SOFTWAREG 0:2540 , G 0:2611 , G 0:2616 , U 0:2645 , HOH 0:3786 , MG 0:8088BINDING SITE FOR RESIDUE NA 0 8339
144PC9SOFTWAREU 0:1740 , U 0:1741 , G 0:2033 , HOH 0:4826 , HOH 0:6239BINDING SITE FOR RESIDUE NA 0 8340
145QC1SOFTWAREG 0:681 , A 0:682 , G 0:683 , HOH 0:3515BINDING SITE FOR RESIDUE NA 0 8341
146QC2SOFTWAREG 0:892 , C 0:893 , HOH 0:5705BINDING SITE FOR RESIDUE NA 0 8342
147QC3SOFTWAREU 0:308 , U 0:335 , A 0:339 , C 0:342 , SER S:94 , ASN S:95 , HOH S:1124BINDING SITE FOR RESIDUE NA 0 8343
148QC4SOFTWAREU 0:2663 , A 0:2811 , A 0:2812 , A 0:2816 , G 0:2817 , HOH 0:8746BINDING SITE FOR RESIDUE NA 0 8344
149QC5SOFTWAREA 0:914 , C 0:915 , C 0:1043 , G 0:1045BINDING SITE FOR RESIDUE NA 0 8349
150QC6SOFTWAREU 0:623 , U 0:624 , G 0:901 , HOH 0:6377 , HOH 0:7141BINDING SITE FOR RESIDUE NA 0 8350
151QC7SOFTWAREA 0:955 , HOH 0:6032 , U 9:3082BINDING SITE FOR RESIDUE NA 0 8352
152QC8SOFTWAREA 0:1040 , G 0:1295 , A 0:1296 , HOH 0:4355 , HOH 0:8736 , GLY K:14BINDING SITE FOR RESIDUE NA 0 8353
153QC9SOFTWAREU 0:768 , C 0:769 , G 0:2111 , A 0:2112 , HOH 0:4297BINDING SITE FOR RESIDUE NA 0 8354
154RC1SOFTWAREG 0:1119 , C 0:1243 , THR I:47 , HOH I:1123 , HOH I:3661BINDING SITE FOR RESIDUE NA 0 8355
155RC2SOFTWAREC 0:920 , U 0:2278 , A 0:2463 , A 0:2467 , HOH 0:6276 , HOH 0:8975BINDING SITE FOR RESIDUE NA 0 8356
156RC3SOFTWAREG 0:941 , U 0:942 , C 0:1023 , G 0:1024 , HOH 0:5711BINDING SITE FOR RESIDUE NA 0 8357
157RC4SOFTWAREG 0:2094 , G 0:2611 , HOH 0:3371 , HOH 0:6829 , HOH 0:7174 , MG 0:8009 , HOH 0:8859 , TRP B:242BINDING SITE FOR RESIDUE NA 0 8358
158RC5SOFTWAREG 0:898 , A 0:922 , A 0:923 , G 0:924 , U 0:2109 , HOH 0:5110BINDING SITE FOR RESIDUE NA 0 8359
159RC6SOFTWAREA 0:453 , U 0:454 , C 0:478 , G 0:479 , HOH 0:5403BINDING SITE FOR RESIDUE NA 0 8360
160RC7SOFTWAREU 0:837 , HOH 0:4070 , HOH 0:4382 , GLN B:230 , GLY B:231BINDING SITE FOR RESIDUE NA 0 8361
161RC8SOFTWAREG 0:2110 , G 0:2111 , U 0:2277BINDING SITE FOR RESIDUE NA 0 8362
162RC9SOFTWAREC 0:1360 , GLY C:66BINDING SITE FOR RESIDUE NA 0 8363
163SC1SOFTWAREG 0:636 , U 0:2057 , G 0:2058 , HOH 0:9114 , HOH 0:9324BINDING SITE FOR RESIDUE NA 0 8364
164SC2SOFTWAREU 0:391 , U 0:392 , U 0:398 , C 0:399 , LYS L:193 , ALA L:194BINDING SITE FOR RESIDUE NA 0 8365
165SC3SOFTWAREG 0:544 , G 0:545 , G 0:610 , U 0:611 , HOH 0:3323 , HOH 0:3381 , HOH 0:9375 , HOH 0:9392BINDING SITE FOR RESIDUE NA 0 8366
166SC4SOFTWAREG 0:464 , G 0:475 , HOH 0:3962 , HOH 0:4084 , HOH 0:9337 , ARG C:55BINDING SITE FOR RESIDUE NA 0 8367
167SC5SOFTWAREG 0:798 , C 0:799 , G 0:814 , U 0:815 , HOH 0:3385BINDING SITE FOR RESIDUE NA 0 8368
168SC6SOFTWAREU 0:391 , U 0:392 , U 0:398 , HOH 0:5997BINDING SITE FOR RESIDUE NA 0 8369
169SC7SOFTWAREG 0:1832 , A 0:2022 , HOH 0:3599 , HOH 0:8628BINDING SITE FOR RESIDUE NA 0 8370
170SC8SOFTWAREG 0:2491 , U 0:2492 , U 0:2528 , G 0:2529BINDING SITE FOR RESIDUE NA 0 8371
171SC9SOFTWAREU 0:919 , G 0:921 , G 0:924BINDING SITE FOR RESIDUE NA 0 8372
172TC1SOFTWAREG 0:1576 , U 0:1577 , G 0:1618 , G 0:1619 , C 0:1620 , HOH 0:3185BINDING SITE FOR RESIDUE NA 0 8373
173TC2SOFTWAREC 0:195 , G 0:196 , A 0:415 , G 0:416 , HOH 0:9404BINDING SITE FOR RESIDUE NA 0 8374
174TC3SOFTWAREG 0:868 , G 0:869 , A 0:886 , G 0:887BINDING SITE FOR RESIDUE NA 0 8375
175TC4SOFTWAREA 0:632 , C 0:633 , A 0:2538 , U 0:2539 , HOH 0:3152 , HOH 0:4336BINDING SITE FOR RESIDUE NA 0 8376
176TC5SOFTWAREG 0:911 , U 0:1293 , A 0:1294 , G 0:1295 , HOH 0:5778BINDING SITE FOR RESIDUE NA 0 8377
177TC6SOFTWAREC 0:762 , G 0:902 , U 0:903 , HOH 0:9714 , HIS K:18 , ARG K:21 , HOH K:8532 , HOH K:8551BINDING SITE FOR RESIDUE NA 0 8378
178TC7SOFTWAREU 0:831 , U 0:832 , G 0:833 , C 0:849 , HOH 0:3219 , HOH 0:3912BINDING SITE FOR RESIDUE NA 0 8379
179TC8SOFTWAREG 0:2585 , U 0:2586 , U 0:2587 , G 0:2592 , HOH 0:3196 , HOH 0:6488 , HOH 0:8855BINDING SITE FOR RESIDUE NA 0 8381
180TC9SOFTWAREG 0:2772 , G 0:2773BINDING SITE FOR RESIDUE NA 0 8382
181UC1SOFTWAREC 0:197BINDING SITE FOR RESIDUE NA 0 8384
182UC2SOFTWAREG 0:1077 , A 0:1079 , C 0:1080 , HOH 0:7076BINDING SITE FOR RESIDUE NA 0 8385
183UC3SOFTWAREG 0:1676BINDING SITE FOR RESIDUE CL 0 8503
184UC4SOFTWAREG 0:201 , U 0:202 , HOH 0:9689BINDING SITE FOR RESIDUE CL 0 8505
185UC5SOFTWAREC 0:2388 , PHE P:52 , HIS P:53 , PHE P:56BINDING SITE FOR RESIDUE CL 0 8511
186UC6SOFTWAREG 0:1300 , A 0:1328 , A 0:1329 , HOH 0:4139 , HOH 0:4430BINDING SITE FOR RESIDUE CL 0 8513
187UC7SOFTWAREG 0:644 , HOH 0:7111 , HIS K:13BINDING SITE FOR RESIDUE CL 0 8514
188UC8SOFTWAREA 0:1597 , A 0:1598 , G 0:1646BINDING SITE FOR RESIDUE CL 0 8515
189UC9SOFTWAREG 0:1119 , C 0:1243 , LYS I:56BINDING SITE FOR RESIDUE CL 0 8516
190VC1SOFTWAREC 0:594 , U 0:595 , ARG X:115 , HOH X:8556BINDING SITE FOR RESIDUE CL 0 8517
191VC2SOFTWAREG 0:1072 , G 0:1087 , A 0:1291 , HOH 0:4798BINDING SITE FOR RESIDUE CL 0 8522
192VC3SOFTWAREG 9:3021 , U 9:3055 , A 9:3056 , A 9:3057 , HOH 9:8521BINDING SITE FOR RESIDUE MG 9 8095
193VC4SOFTWAREC 9:3040BINDING SITE FOR RESIDUE NA 9 8351
194VC5SOFTWAREG 9:3021 , G 9:3022 , A 9:3057 , G 9:3058 , HOH 9:8521BINDING SITE FOR RESIDUE NA 9 8383
195VC6SOFTWAREHOH 0:3468 , HOH 0:9431 , HOH A:8519 , HOH A:8546 , HOH A:8595 , HOH A:8623BINDING SITE FOR RESIDUE MG A 8065
196VC7SOFTWAREG 0:1873 , HOH 0:3841 , HOH 0:7282 , ASP A:26 , HOH A:8545BINDING SITE FOR RESIDUE MG A 8066
197VC8SOFTWAREHOH 0:4820 , ASN A:174 , HOH A:8619 , ARG Y:13BINDING SITE FOR RESIDUE MG A 8105
198VC9SOFTWAREA 0:2633 , PHE A:201 , GLY A:202 , GLY A:203 , HIS A:208 , HOH A:8550 , HOH A:8594BINDING SITE FOR RESIDUE NA A 8345
199WC1SOFTWARELYS A:175 , LYS A:178BINDING SITE FOR RESIDUE CL A 8509
200WC2SOFTWAREA 0:2757 , HOH 0:3174 , HOH 0:3472 , HOH 0:7221 , HOH 0:9488 , ASN B:335BINDING SITE FOR RESIDUE MG B 8056
201WC3SOFTWAREARG B:223 , LYS B:224 , HIS B:227 , HOH B:8531BINDING SITE FOR RESIDUE CL B 8519
202WC4SOFTWAREASP C:45 , THR C:94 , LYS C:96BINDING SITE FOR RESIDUE NA C 8304
203WC5SOFTWAREA 0:1133 , G 0:1134 , LYS H:150 , VAL H:153 , THR H:154 , PRO H:155BINDING SITE FOR RESIDUE NA H 8309
204WC6SOFTWAREHOH 0:5212 , HOH 0:9004 , ARG I:60 , VAL I:61 , ILE I:63 , TYR I:69BINDING SITE FOR RESIDUE NA I 8346
205WC7SOFTWAREASN I:126 , ILE I:127 , LYS I:128 , HOH I:4038 , HOH I:4193BINDING SITE FOR RESIDUE CL I 8501
206WC8SOFTWAREPRO I:88 , HIS I:89 , LYS I:90 , LYS I:91BINDING SITE FOR RESIDUE CL I 8502
207WC9SOFTWAREGLY I:64 , ASN I:65 , GLY I:68BINDING SITE FOR RESIDUE CL I 8521
208XC1SOFTWAREHOH 0:3736 , ASN J:42 , HOH J:1797 , HOH J:2121 , HOH J:5362 , HOH J:7871BINDING SITE FOR RESIDUE MG J 8069
209XC2SOFTWAREG 0:2582 , A 0:2596 , HOH 0:4575 , LYS J:14 , ILE J:32 , SER J:33BINDING SITE FOR RESIDUE CL J 8512
210XC3SOFTWAREARG K:27 , GLY K:28 , GLY K:29 , GLY K:31 , ALA K:33 , GLU K:39 , HOH K:8588BINDING SITE FOR RESIDUE NA K 8380
211XC4SOFTWAREARG K:53BINDING SITE FOR RESIDUE CL K 8510
212XC5SOFTWAREASN L:106 , PHE L:109 , PRO L:110 , LEU L:112 , HOH L:8628BINDING SITE FOR RESIDUE NA L 8347
213XC6SOFTWAREASN L:106 , VAL L:114 , LEU L:157 , ARG L:158 , THR L:159BINDING SITE FOR RESIDUE CL L 8518
214XC7SOFTWARELYS D:146 , ARG M:37 , LYS M:38 , ASN M:107BINDING SITE FOR RESIDUE CL M 8507
215XC8SOFTWAREHIS N:40 , HOH N:5650BINDING SITE FOR RESIDUE CD N 8405
216XC9SOFTWAREASN N:44BINDING SITE FOR RESIDUE CL N 8508
217YC1SOFTWAREASP P:20 , GLY P:22 , SER P:24 , SER P:46 , HOH P:1795 , HOH P:7505BINDING SITE FOR RESIDUE NA P 8348
218YC2SOFTWAREHOH 0:5368 , SER Q:70 , LYS Q:71 , VAL Q:72 , ASP Q:73 , HOH Q:8526BINDING SITE FOR RESIDUE NA Q 8337
219YC3SOFTWAREU 0:2659 , G 0:2660 , VAL Q:72 , TRP Q:75 , HOH Q:8518 , HOH Q:8528BINDING SITE FOR RESIDUE NA Q 8338
220YC4SOFTWARELYS Q:60 , GLN Q:61 , ASN Q:63BINDING SITE FOR RESIDUE NA Q 8386
221YC5SOFTWARELYS Q:118BINDING SITE FOR RESIDUE CL Q 8506
222YC6SOFTWAREHIS R:7 , GLU R:61BINDING SITE FOR RESIDUE NA R 8312
223YC7SOFTWAREGLN S:37 , ARG S:111 , LEU S:112 , SER S:114 , ASP S:117 , HOH S:2868BINDING SITE FOR RESIDUE MG S 8073
224YC8SOFTWARECYS T:6 , CYS T:9 , CYS T:32 , CYS T:36BINDING SITE FOR RESIDUE CD T 8401
225YC9SOFTWAREHIS X:133 , LYS X:136 , LYS X:137 , VAL X:139 , HOH X:8562 , HOH X:8583 , HOH X:8617BINDING SITE FOR RESIDUE MG X 8109
226ZC1SOFTWAREG 0:1269 , HOH 0:4415 , ARG X:169BINDING SITE FOR RESIDUE CL X 8520
227ZC2SOFTWARECYS Y:39 , CYS Y:42 , CYS Y:57 , CYS Y:60BINDING SITE FOR RESIDUE CD Y 8403
228ZC3SOFTWARECYS Z:19 , CYS Z:22 , CYS Z:34 , CYS Z:37BINDING SITE FOR RESIDUE CD Z 8402
229ZC4SOFTWAREHOH 0:7273 , GLY 2:45 , GLY 2:47 , ASP 2:49 , HOH 2:8521 , HOH 2:8560BINDING SITE FOR RESIDUE MG 2 8078
230ZC5SOFTWARECYS 2:11 , CYS 2:14 , CYS 2:71 , CYS 2:74BINDING SITE FOR RESIDUE CD 2 8404
231ZC6SOFTWAREASP 2:66BINDING SITE FOR RESIDUE CL 2 8504

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1QVG)

(-) Cis Peptide Bonds  (6, 6)

Asymmetric/Biological Unit
No.Residues
1Trp A:186 -Pro A:187
2Gly B:14 -Pro B:15
3Asn B:243 -Pro B:244
4Val C:136 -Pro C:137
5Gln F:55 -Pro F:56
6Arg L:184 -Pro L:185

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (2, 2)

Asymmetric/Biological Unit (2, 2)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_RL6_HALMA_001 *R3SRL6_HALMA  ---  ---ER2S
2UniProtVAR_RL6_HALMA_002 *E24SRL6_HALMA  ---  ---EE23S
   * ID not provided by source

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (23, 23)

Asymmetric/Biological Unit (23, 23)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1RIBOSOMAL_L37EPS01077 Ribosomal protein L37e signature.RL37_HALMA5-24  1Z:4-23
2RIBOSOMAL_L19EPS00526 Ribosomal protein L19e signature.RL19E_HALMA7-26  1O:6-25
3RIBOSOMAL_L24EPS01073 Ribosomal protein L24e signature.RL24E_HALMA9-26  1T:8-25
4RIBOSOMAL_L30PS00634 Ribosomal protein L30 signature.RL30_HALMA20-52  1V:20-52
5RIBOSOMAL_L39EPS00051 Ribosomal protein L39e signature.RL39_HALMA29-45  11:28-44
6RIBOSOMAL_L18EPS01106 Ribosomal protein L18e signature.RL18E_HALMA32-49  1N:31-48
7RIBOSOMAL_L21EPS01171 Ribosomal protein L21e signature.RL21_HALMA37-62  1P:36-61
8RIBOSOMAL_L5PS00358 Ribosomal protein L5 signature.RL5_HALMA42-58  1D:41-57
9RIBOSOMAL_L29PS00579 Ribosomal protein L29 signature.RL29_HALMA43-57  1U:42-56
10RIBOSOMAL_L24PS01108 Ribosomal protein L24 signature.RL24_HALMA46-63  1S:45-62
11RIBOSOMAL_L31EPS01144 Ribosomal protein L31e signature.RL31_HALMA49-63  1W:48-62
12RIBOSOMAL_L44EPS01172 Ribosomal protein L44e signature.RL44E_HALMA60-71  12:60-71
13RIBOSOMAL_L23PS00050 Ribosomal protein L23 signature.RL23_HALMA63-78  1R:62-77
14RIBOSOMAL_L7AEPS01082 Ribosomal protein L7Ae signature.RL7A_HALMA68-85  1F:67-84
15RIBOSOMAL_L14PS00049 Ribosomal protein L14 signature.RL14_HALMA71-97  1J:71-97
16RIBOSOMAL_L13PS00783 Ribosomal protein L13 signature.RL13_HALMA83-106  1I:83-106
17RIBOSOMAL_L1EPS00939 Ribosomal protein L1e signature.RL4_HALMA103-129  1C:103-129
18RIBOSOMAL_L15PS00475 Ribosomal protein L15 signature.RL15_HALMA108-138  1K:107-137
19RIBOSOMAL_L22PS00464 Ribosomal protein L22 signature.RL22_HALMA124-148  1Q:123-147
20RIBOSOMAL_L32EPS00580 Ribosomal protein L32e signature.RL32_HALMA129-149  1X:128-148
21RIBOSOMAL_L6_2PS00700 Ribosomal protein L6 signature 2.RL6_HALMA151-172  1E:150-171
22RIBOSOMAL_L2PS00467 Ribosomal protein L2 signature.RL2_HALMA188-199  1A:187-198
23RIBOSOMAL_L3PS00474 Ribosomal protein L3 signature.RL3_HALMA195-218  1B:194-217

(-) Exons   (0, 0)

(no "Exon" information available for 1QVG)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain 0 from PDB  Type:RNA  Length:2754
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
                1qvg 0   10 UAUGCCAGCUGGUGGAUUGCUCGGCUCAGGCGCUGAUGAAGGACGUGCCAAGCUGCGAUAAGCCAUGGGGAGCCGCACGGAGGCGAAGAACCAUGGAUUUCCGAAUGAGAAUCUCUAACAAUUGCUUCGCGCAAUGAGGAACCCCGAGAACUGAAACAUCUCAGUAUCGGGAGGAACAGAAAACGCAAUGUGAUGUCGUUAGUAACCGCGAGUGAACGCGAUACAGCCCAAACCGAAGCCCUCACGGGCAAUGUGGUGUCAGGGCUACCUCUCAUCAGCCGACCGUCUCGACGAAGUCUCUUGGAACAGAGCGUGAUACAGGGUGACAACCCCGUACUCGAGACCAGUACGACGUGCGGUAGUGCCAGAGUAGCGGGGGUUGGAUAUCCCUCGCGAAUAACGCAGGCAUCGACUGCGAAGGCUAAACACAACCUGAGACCGAUAGUGAACAAGUAGUGUGAACGAACGCUGCAAAGUACCCUCAGAAGGGAGGCGAAAUAGAGCAUGAAAUCAGUUGGCGAUCGAGCGACAGGGCAUACAAGGUCCCUCGACGAAUGACCGACGCGCGAGCGUCCAGUAAGACUCACGGGAAGCCGAUGUUCUGUCGUACGUUUUGAAAAACGAGCCAGGGAGUGUGUCUGCAUGGCAAGUCUAACCGGAGUAUCCGGGGAGGCACAGGGAAACCGACAUGGCCGCAGGGCUUGCCCGAGGGCCGCCGUCUUCAAGGGCGGGGAGCCAUGUGGACACGACCCGAAUCCGGACGAUCUACGCAUGGACAAGAUGAAGCGUGCCGAAAGGCACGUGGAAGUCUGUUAGAGUUGGUGUCCUACAAUACCCUCUCGUGAUCUAUGUGUAGGGGUGAAAGGCCCAUCGAGUCCGGCAACAGCUGGUUCCAAUCGAAACAUGUCGAAGCAUGACCUCCGCCGAGGUAGUCUGUGAGGUAGAGCGACCGAUUGGUCCUGUCAAACUCCAAACUUACAGACGCCGUUUGACGCGGGGAUUCCGGUGCGCGGGGUAAGCCUGUGUACCAGGAGGGGAACAACCCAGAGAUAGGUUAAGGUCCCCAAGUGUGGAUUAAGUGUAAUCCUCUGAAGGUGGUCUCGAGCCCUAGACAGCCGGGAGGUGAGCUUAGAAGCAGCUACCCUCUAAGAAAAGCGUAACAGCUUACCGGCCGAGGUUUGAGGCGCCCAAAAUGAUCGGGACUCAAAUCCACCACCGAGACCUGUCCGUACCACUCAUACUGGUAAUCGAGUAGAUUGGCGCUCUAAUUGGAUGGAAGUAGGGGUGAAAACUCCUAUGGACCGAUUAGUGACGAAAAUCCUGGCCAUAGUAGCAGCGAUAGUCGGGUGAGAACCCCGACGGCCUAAUGGAUAAGGGUUCCUCAGCACUGCUGAUCAGCUGAGGGUUAGCCGGUCCUAAGUCAUACCGCAACUCGACUAUGACGAAAUGGGAAACGGGUUAAUAUUCCCGUGCCACUAUGCAGUGAAAGUUGACGCCCUGGGGUCGAUCACGCUGGGCAUCGCCCAGUCGAACCGUCCAACUCCGUGGAAGCCGUAAUGGCAGGAAGCGGACGAACGGCGGCAUAGGGAAACGUGAUUCAACCUGGGGCCCAUGAAAAGACGAGCAUAGUGUCCGUACCGAGAACCGACACAGGUGUCCAUGGCGGCGAAAGCCAAGGCCUGUCGGGAGCAACCAACGUUAGGGAAUUCGGCAAGUUAGUCCCGUACCUUCGGAAGAAGGGAUGCCUGCUCCGGAACGGAGCAGGUCGCAGUGACUCGGAAGCUCGGACUGUCUAGUAACAACAUAGGUGACCGCAAAUCCGCAAGGACUCGUACGGUCACUGAAUCCUGCCCAGUGCAGGUAUCUGAACACCUCGUACAAGAGGACGAAGGACCUGUCAACGGCGGGGGUCUUAAGGUAGCGUAGUACCUUGCCGCAUCAGUAGCGGCUUGCAUGAAUGGAUUAACCAGAGCUUCACUGUCCCAACGUUGGGCCCGGUGAACUGUACAUUCCAGUGCGGAGUCUGGAGACACCCAGGGGGAAGCGAAGACCCUAUGGAGCUUUACUGCAGGCUGUCGCUGAGGACUCUCACUCCGGGAGGAGGACACCGAUAGCCGGGCAGUUUGACUGGGGCGGUACGCGCUCGAAAAGAUAUCGAGCGCGCCCUAUGGCUAUCUCAGCCGGGGACCCGGCGAAGAGUGCAAGAGCAAAAGAUAGCUUGACAGUGUUCUUCCCAACGAGGAACGCUGACGCGAAAGCGUGGUCUAGCGAACCAAUUAGCCUGCUUGAUGCGGGCAAUUGAUGACAGAAAAGCUACCCUAGGGAUAACAGAGUCGUCACUCGCAAGAGCACAUAUCGACCGAGUGGCUUGCUACCUCGAUGUCGGUUCCCUCCAUCCUGCCCGUGCAGAAGCGGGCAAGGGUGAGGUUGUUCGCCUAUUAAAGGAGGUCGUGAGCUGGGUUUAGACCGUCGUGAGACAGGUCGGCUGCUAUCUACUGGGUGUGUAGGUGUCUGACAAGAACGACCGUAUAGUACGAGAGGAACUACGGUUGGUGGCCACUGGUGUACCGGUUGUUCGAGAGAGCACGUGCCGGGUAGCCACGCCACACGGGGUAAGAGCUGAACGCAUCUAAGCUCGAAACCCACUUGGAAAAGAGACACCGCCGAGGUCCCGCGUACAAGACGCGGUCGAUAGACUCGGGGUGUGCGCGUCGAGGUAACGAGACGUUAAGCCCACGAGCACUAACAGACCAA 2914
                                    19        29        39        49        59        69        79        89        99       109       119     ||131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       601       611       621       631       641       651       661       671       681       691       701       711  ||   722       732       742       752       762       772       782       792       802       812       822       832       842       852       862       872       882       892       902       912       922       932       942       952       962      1000      1010      1020      1030      1040      1050      1060      1070      1080      1090      1100      1110      1120      1130      1140      1150      1160      1170      1180      1190      1200      1210      1220      1230      1240      1250      1260      1270      1280      1290      1300      1310      1320      1330      1340      1350      1360      1370      1380      1390      1400      1410      1420      1430      1440      1450      1460      1470      1480      1490      1500      1510      1520      1530      1540      1550      1561      1571      1581      1591      1601      1611      1621      1631      1641      1651      1661      1671      1681      1691      1701      1711      1721      1731      1741      1751      1761      1771      1781      1791      1801      1811      1821      1831      1841      1851      1861      1871      1881      1891      1901      1911      1921      1931      1941      1951|     1973      1983      1993      2003      2013      2023      2033      2043      2053      2063      2073      2083      2093      2103      2113      2123      2133  ||  2243      2253      2263      2273      2283      2293      2303      2313      2323      2333    ||2348      2358      2368      2378      2388      2398      2408      2418      2428      2438      2448      2458      2468      2478      2488      2498      2508      2518      2528      2538      2548      2558      2568      2578      2588      2598      2608      2618      2628      2638      2648      2658     |2670      2680      2690      2700      2710      2720      2730      2740      2750      2760      2770      2780      2790      2800      2810      2820      2830      2840      2850      2860      2870      2880      2890      2900      2910    
                                                                                                                                             125|                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       714|                                                                                                                                                                                                                                                           970|                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            1559|                                                                                                                                                                                                                                                                                                                                                                                                  1951|                                                                                                                                                                        2136|                                                                                                 2338|                                                                                                                                                                                                                                                                                                                            2664|                                                                                                                                                                                                                                                       
                                                                                                                                              128                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        716                                                                                                                                                                                                                                                            999                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             1561                                                                                                                                                                                                                                                                                                                                                                                                   1964                                                                                                                                                                         2237                                                                                                  2344                                                                                                                                                                                                                                                                                                                             2667                                                                                                                                                                                                                                                       

Chain 1 from PDB  Type:PROTEIN  Length:46
 aligned with RL39_HALMA | P22452 from UniProtKB/Swiss-Prot  Length:50

    Alignment length:49
                                    11        21        31        41         
          RL39_HALMA      2 GKKSKATKKRLAKLDNQNSRVPAWVMLKTDREVQRNHKRRHWRRNDTDE   50
               SCOP domains d1qvg1_ 1: Ribosomal protein L3   9e              SCOP domains
               CATH domains 1qvg100 1:1-49                                    CATH domains
               Pfam domains ------Ribosomal_L39-1qvg101 1:7   -49             Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhh....hhhhhhhh..---............... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------RIBOSOMAL_L39E   ----- PROSITE
                 Transcript ------------------------------------------------- Transcript
                1qvg 1    1 GKKSKATKKRLAKLDNQNSRVPAWVMLKTDE---RNHKRRHWRRNDTDE   49
                                    10        20        30|   |   40         
                                                         31  35              

Chain 2 from PDB  Type:PROTEIN  Length:92
 aligned with RL44E_HALMA | P32411 from UniProtKB/Swiss-Prot  Length:92

    Alignment length:92
                                    10        20        30        40        50        60        70        80        90  
         RL44E_HALMA      1 MQMPRRFNTYCPHCNEHQEHEVEKVRSGRQTGMKWIDRQRERNSGIGNDGKFSKVPGGDKPTKKTDLKYRCGECGKAHLREGWRAGRLEFQE   92
               SCOP domains d1qvg2_ 2: Ribosomal protein L44e                                                            SCOP domains
               CATH domains 1qvg200 2:1-92  [code=3.10.450.80, no name defined]                                          CATH domains
               Pfam domains -------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eee.eeeeee....eeeeeeeee.........hhhhhhhhhhh....hhhhhh............eeeee.....ee..........eee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) -------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) -----------------------------------------------------------RIBOSOMAL_L4--------------------- PROSITE (3)
                 Transcript -------------------------------------------------------------------------------------------- Transcript
                1qvg 2    1 MQMPRRFNTYCPHCNEHQEHEVEKVRSGRQTGMKWIDRQRERNSGIGNDGKFSKVPGGDKPTKKTDLKYRCGECGKAHLREGWRAGRLEFQE   92
                                    10        20        30        40        50        60        70        80        90  

Chain 3 from PDB  Type:RNA  Length:3
                                    
                1qvg 3   74 CCA   76

Chain 4 from PDB  Type:RNA  Length:3
                                    
                1qvg 4   74 CCA   76

Chain 5 from PDB  Type:RNA  Length:3
                                    
                1qvg 5   74 CCA   76

Chain 9 from PDB  Type:RNA  Length:122
                                                                                                                                                           
                1qvg 9 3001 UUAGGCGGCCACAGCGGUGGGGUUGCCUCCCGUACCCAUCCCGAACACGGAAGAUAAGCCCACCAGCGUUCCGGGGAGUACUGGAGUGCGCGAGCCUCUGGGAAACCCGGUUCGCCGCCACC 3122
                                  3010      3020      3030      3040      3050      3060      3070      3080      3090      3100      3110      3120  

Chain A from PDB  Type:PROTEIN  Length:237
 aligned with RL2_HALMA | P20276 from UniProtKB/Swiss-Prot  Length:240

    Alignment length:237
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       
           RL2_HALMA      2 GRRIQGQRRGRGTSTFRAPSHRYKADLEHRKVEDGDVIAGTVVDIEHDPARSAPVAAVEFEDGDRRLILAPEGVGVGDELQVGVSAEIAPGNTLPLAEIPEGVPVCNVESSPGDGGKFARASGVNAQLLTHDRNVAVVKLPSGEMKRLDPQCRATIGVVAGGGRTDKPFVKAGNKHHKMKARGTKWPNVRGVAMNAVDHPFGGGGRQHPGKPKSISRNAPPGRKVGDIASKRTGRGG  238
               SCOP domains d1qvga2 A:1-90 N-terminal domain of ribosomal protein L2                                  d1qvga1 A:91-237 C-terminal domain of ribosomal protein L2                                                                                          SCOP domains
               CATH domains 1qvgA02 A:1-78 Nucleic acid-binding proteins                                  ---1qvgA01 A:82-159  [code=2.30.30.30, no name defined]                          1qvgA03 A:160-237 Ribosomal protein L2, domain 3                               CATH domains
               Pfam domains ---------Ribosomal_L2-1qvgA02 A:10-82                                             -----Ribosomal_L2_C-1qvgA01 A:88-221                                                                                                       ---------------- Pfam domains
         Sec.struct. author ...hhhhhhhh.......hhhhh...............eeeeeeeee......eeeeeee....eeeee.........eee...........eee.hhh....eee...................eeeee.....eeee.....eeee....eeee......hhhhh...hhhhhhhhhh.........hhhhhhhhhh..............ee...........ee......... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RIBOSOMAL_L2--------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1qvg A    1 GRRIQGQRRGRGTSTFRAPSHRYKADLEHRKVEDGDVIAGTVVDIEHDPARSAPVAAVEFEDGDRRLILAPEGVGVGDELQVGVDAEIAPGNTLPLAEIPEGVPVCNVESSPGDGGKFARASGVNAQLLTHDRNVAVVKLPSGEMKRLDPQCRATIGVVGGGGRTDKPFVKAGNKHHKMKARGTKWPNVRGVAMNAVDHPFGGGGRQHPGKPKSISRNAPPGRKVGDIASKRTGRGG  237
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       

Chain B from PDB  Type:PROTEIN  Length:337
 aligned with RL3_HALMA | P20279 from UniProtKB/Swiss-Prot  Length:338

    Alignment length:337
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       
           RL3_HALMA      2 PQPSRPRKGSLGFGPRKRSTSETPRFNSWPSDDGQPGVQGFAGYKAGMTHVVLVNDEPNSPREGMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTLDVPEDHDPDAAEEQIRDAHEAGDLGDLRLITHTVPDAVPSVPKKKPDVMETRVGGGSVSDRLDHALDIVEDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPTVDGGFVNYGEVDGPYTLVKGSVPGPDKRLVRFRPAVRPNDQPRLDPEVRYVSNESNQG  338
               SCOP domains d1qvgb_ B: Ribosomal protein L3                                                                                                                                                                                                                                                                                                                   SCOP domains
               CATH domains 1qvgB03 B:1-38,B:207-257              1qvgB01 B:39-77,B:189-206,B:258-337    1qvgB02 B:78-188  [code=3.30.1430.10, no name defined]                                                         1qvgB01           1qvgB03 B:1-38,B:207-257                           1qvgB01 B:39-77,B:189-206,B:258-337 Translation factors                          CATH domains
               Pfam domains --------------------------------------------Ribosomal_L3-1qvgB01 B:45-312                                                                                                                                                                                                                                               ------------------------- Pfam domains
         Sec.struct. author ....................................ee..eeeeeeeeeeeee..............eeeeeeee...ee..eeeeeeee..eeeeeeeee......hhhhh.......hhhhhhhhhhhhhhhh.eeeeeeeee.hhhhh.........eeeeeee..hhhhhhhhhhhhhhhh.eehhhhhh....eeeeeee.....eehhhhhhh....hhhhhhh........................ee....eeeeeeeeeeeeeee................eeeeeee.........eeee...............eeee....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RIBOSOMAL_L3            ------------------------------------------------------------------------------------------------------------------------ PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1qvg B    1 PQPSRPRKGSLGFGPRKRSTSETPRFNSWPSDDGQPGVQGFAGYKAGMTHVVLVNDEPNSPREGMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTLDVPEDHDPDAAEEQIRDAHEAGDLGDLRLITHTVPDAVPSVPKKKPDVMETRVGGGSVSDRLDHALDIVEDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPTVDGGFVNYGEVDGPYTLVKGSVPGPDKRLVRFRPAVRPNDQPRLDPEVRYVSNESNQG  337
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       

Chain C from PDB  Type:PROTEIN  Length:246
 aligned with RL4_HALMA | P12735 from UniProtKB/Swiss-Prot  Length:246

    Alignment length:246
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240      
           RL4_HALMA      1 MQATIYDLDGNTDGEVDLPDVFETPVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAESFGSGRGQAHVPKQDGRARRVPQAVKGRSAHPPKTEKDRSLDLNDKERQLAVRSALAATADADLVADRGHEFDRDEVPVVVSDDFEDLVKTQEVVSLLEALDVHADIDRADETKIKAGQGSARGRKYRRPASILFVTSDEPSTAARNLAGADVATASEVNTEDLAPGGAPGRLTVFTESALAEVAER  246
               SCOP domains d1qvgc_ C: Ribosomal protein L4                                                                                                                                                                                                                        SCOP domains
               CATH domains 1qvgC00 C:1-246  [code=3.40.1370.10, no name defined]                                                                                                                                                                                                  CATH domains
               Pfam domains ---------------Ribosomal_L4-1qvgC01 C:16-246                                                                                                                                                                                                           Pfam domains
         Sec.struct. author .ee............ee.hhhhhh..hhhhhhhhhhhhhhhh.............................ee..ee.........................hhhhhhhhhhhhhhhh.hhhhhhhh..........eeehhhhhhh.hhhhhhhhhhhh.hhhhhhhhh..ee..hhhhhhh..ee.....eeee....hhhhhh....eeee....hhhhhhhhhh....eeeehhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------RIBOSOMAL_L1E              --------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                1qvg C    1 MQATIYDLDGNTDGEVDLPDVFETPVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAESFGSGRGQAHVPKLDGRARRVPQAVKGRSAHPPKTEKDRSLDLNDKERQLAVRSALAATADADLVADRGHEFDRDEVPVVVSDDFEDLVKTQEVVSLLEALDVHADIDRADETKIKAGQGSARGRKYRRPASILFVTSDEPSTAARNLAGADVATASEVNTEDLAPGGAPGRLTVFTESALAEVAER  246
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240      

Chain D from PDB  Type:PROTEIN  Length:140
 aligned with RL5_HALMA | P14124 from UniProtKB/Swiss-Prot  Length:177

    Alignment length:165
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170     
           RL5_HALMA     11 FHEMREPRIEKVVVHMGIGHGGRDLANAEDILGEITGQMPVRTKAKRTVGEFDIREGDPIGAKVTLRDEMAEEFLQTALPLAELATSQFDDTGNFSFGVEEHTEFPSQEYDPSIGIYGLDVTVNLVRPGYRVAKRDKASRSIPTKHRLNPADAVAFIESTYDVEV  175
               SCOP domains d1qvgd_ D: Ribosomal      protein L5                                                                                                                                  SCOP domains
               CATH domains 1qvgD00 D:10-174  [c     ode=3.30.1440.10, no name defined]                                                                                                           CATH domains
               Pfam domains -Ribosomal_L5-1qvgD0     1 D:11-64                     ---Ribosomal_L5_C-1qvgD02 D:68-166                                                                    -------- Pfam domains
         Sec.struct. author ........eeeeeeee....-----..hhhhhhhhhh...ee...................eeeee.hhhhhhhhhhhhhhh............eee.--------------------.eeeeee....hhhhhh.......hhhhh.hhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) --------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) --------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) -------------------------------RIBOSOMAL_L5     --------------------------------------------------------------------------------------------------------------------- PROSITE (4)
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1qvg D   10 FHEMREPRIEKVVVHMGIGH-----ANAEDILGEITGQMPVRTKAKRTVGEFDIREGDPIGAKVTLRDEMAEEFLQTALPLAELATSQFDDTGNFSFG--------------------LDVTVNLVRPGYRVAKRDKASRSIPTKHRLNPADAVAFIESTYDVEV  174
                                    19        29     |  39        49        59        69        79        89        99       | -         -       129       139       149       159       169     
                                              29    35                                                                     107                  128                                              

Chain E from PDB  Type:PROTEIN  Length:172
 aligned with RL6_HALMA | P14135 from UniProtKB/Swiss-Prot  Length:178

    Alignment length:172
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171  
           RL6_HALMA      2 PRVELEIPEDVDAEQDHLDITVEGDNGSVTRRLWYPDIDVSVDGDTVVIESDEDNAKTMSTIGTFQSHIENMFHGVTEGWEYGMEVFYSHFPMQVNVEGDEVVIENFLGEKAPRRTTIHGDTDVEIDGEELTVSGPDIEAVGQTAADIEQLTRINDKDVRVFQDGVYITRKP  173
               SCOP domains d1qvge1 E:1-79 Ribosomal protein L6                                            d1qvge2 E:80-172 Ribosomal protein L6                                                         SCOP domains
               CATH domains 1qvgE02 E:1-79  [code=3.90.930.12, no name defined]                            1qvgE01 E:80-172  [code=3.90.930.12, no name defined]                                         CATH domains
           Pfam domains (1) ------------------------------------------------------------------------------------------Ribosomal_L6-1qvgE01 E:91-165                                              ------- Pfam domains (1)
           Pfam domains (2) ------------------------------------------------------------------------------------------Ribosomal_L6-1qvgE02 E:91-165                                              ------- Pfam domains (2)
         Sec.struct. author .eeeee.....eeeee..eeeeee..eeeeee.....eeeeee..eeeeee...hhhhhhhhhhhhhhhhhhhhhhh..eeeeeeee......eeee...eeeeehhhhh...eeee.....eeeee..eeeeee.hhhhhhhhhhhhhhh.............eeeeee.. Sec.struct. author
                 SAPs(SNPs) -S--------------------S----------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------RIBOSOMAL_L6_2        - PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1qvg E    1 PRVELEIPEDVDAEQDHLDITVEGDNGSVTRRLWYPDIDVSVDGDTVVIESDEDNAKTMSTIGTFQSHIENMFHGVTEGWEYGMEVFYSHFPMQVNVEGDEVVIENFLGEKAPRRTTIHGDTDVEIDGEELTVSGPDIEAVGQTAADIEQLTRINDKDVRVFQDGVYITRKP  172
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170  

Chain F from PDB  Type:PROTEIN  Length:119
 aligned with RL7A_HALMA | P12743 from UniProtKB/Swiss-Prot  Length:120

    Alignment length:119
                                    11        21        31        41        51        61        71        81        91       101       111         
          RL7A_HALMA      2 PVYVDFDVPADLEDDALEALEVARDTGAVKKGTNETTKSIERGSAELVFVAEDVQPEEIVMHIPELADEKGVPFIFVEQQDDLGHAAGLEVGSAAAAVTDAGEADADVEDIADKVEELR  120
               SCOP domains d1qvgf_ F: Ribosomal protein L7ae                                                                                       SCOP domains
               CATH domains 1qvgF00 F:1-119  [code=3.30.1330.30, no name defined]                                                                   CATH domains
               Pfam domains -------------Ribosomal_L7Ae-1qvgF01 F:14-108                                                                ----------- Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhhhhhhhh.eeehhhhhhhhhhhh....eeee.....hhhhhhhhhhhhh....eeee.hhhhhhhhhh......eeee.....hhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------RIBOSOMAL_L7AE    ----------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------- Transcript
                1qvg F    1 PVYVDFDVPADLEDDALEALEVARDTGAVKKGTNETTKSIERGSAELVFVAEDVQPEEIVMHIPELADEKGVPFIFVEQQDDLGHAAGLEVGSAAAAVTDAGAAATVLEEIADKVEELR  119
                                    10        20        30        40        50        60        70        80        90       100       110         

Chain G from PDB  Type:PROTEIN  Length:29
 aligned with RL10_HALMA | P15825 from UniProtKB/Swiss-Prot  Length:348

    Alignment length:62
                                    21        31        41        51        61        71  
          RL10_HALMA     12 IPEWKQEEVDAIVEMIESYESVGVVNIAGIPSRQLQDMRRDLHGTAELRVSRNTLLERALDD   73
               SCOP domains d1qvgg_ G:                                                     SCOP domains
               CATH domains 1qvgG00 G:12-73                                                CATH domains
               Pfam domains -------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhh---------------------------------hhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------- Transcript
                1qvg G   12 IPEWKQEEVDAIVEMIES---------------------------------RNTLLERALDD   73
                                    21       | -         -         -         - |      71  
                                            29                                63          

Chain H from PDB  Type:PROTEIN  Length:156
                                                                                                                                                                                             
               SCOP domains d1qvgh_ H: Ribosomal protein L10e                                                                                                                            SCOP domains
               CATH domains 1qvgH00 H:1-167  [code=3.90.1170.10, no name defined]                                                                                                        CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhh.........................eee.........eeeeeee...eeeehhhhhhhhhhhhh...........eeee.....eeeee..........eeeeeeeee....eeeeeee....hhhhhhhhhhhhh...eeeee...... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                1qvg H    1 KPGAMYRNSSKPAYTRREYISGIPGKKIAQFDMGNNGAGPTYPAQVELVVEKPVQIRHNALEAARVAANRYVQNSGAAANYKFRIRKFPFHVIRENKDGMRAPFGKPVGTAARVHGANHIFIAWVNPDPNVEEAWRRAKMKVTPTINIDSSPAGNA  167
                                    10        20        30        40        50        60        70        80        90      |111       121       131       141       151       161      
                                                                                                                           97|                                                          
                                                                                                                           109                                                          

Chain I from PDB  Type:PROTEIN  Length:142
 aligned with RL13_HALMA | P29198 from UniProtKB/Swiss-Prot  Length:145

    Alignment length:142
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143  
          RL13_HALMA      4 AEFDADVIVDARDCIMGRVASQVAEQALDGETVAVVNAERAVITGREEQIVEKYEKRVDIGNDNGYFYPKRPDGIFKRTIRGMLPHKKQRGREAFESVRVYLGNPYDEDGEVLDGTSLDRLSNIKFVTLGEISETLGANKTW  145
               SCOP domains d1qvgi_ I: Ribosomal protein L13                                                                                                               SCOP domains
               CATH domains 1qvgI00 I:4-145  [code=3.90.1180.10, no name defined]                                                                                          CATH domains
               Pfam domains -----Ribosomal_L13-1qvgI01 I:9-117                                                                                ---------------------------- Pfam domains
         Sec.struct. author ......eeee....hhhhhhhhhhhhhhh...eeeehhhh.eee.hhhhhhhhhhhhhhh..........hhhhhhhhhhhh.....hhhhhhhhhheee..................hhhhh..eeehhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ---------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) -------------------------------------------------------------------------------RIBOSOMAL_L13           --------------------------------------- PROSITE (3)
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1qvg I    4 AEFDADVIVDARDCIMGRVASQVAEQALDGETVAVVNAERAVITGREEQIVEKYEKRVDIGNDNGYFYPKRPDGIFKRTIRGMLPHKKQRGREAFESVRVYLGNPYDEDGEVLDGTSLDRLSNIKFVTLGEISETLGANKTW  145
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143  

Chain J from PDB  Type:PROTEIN  Length:132
 aligned with RL14_HALMA | P22450 from UniProtKB/Swiss-Prot  Length:132

    Alignment length:132
                                    10        20        30        40        50        60        70        80        90       100       110       120       130  
          RL14_HALMA      1 MEALGADVTQGLEKGSLITCADNTGARELKVISVHGYSGTKNRHPKAGLGDKITVSVTKGTPEMRRQVLEAVVVRQRKPIRRPDGTRVKFEDNAAVIVDENEDPRGTELKGPIAREVAQRFGSVASAATMIV  132
               SCOP domains d1qvgj_ J: Ribosomal protein L14                                                                                                     SCOP domains
               CATH domains 1qvgJ00 J:1-132 Ribosomal Protein L14;                                                                                               CATH domains
               Pfam domains ----------Ribosomal_L14-1qvgJ01 J:11-132                                                                                             Pfam domains
         Sec.struct. author ......ee...ee...eeee.....eeeeeeeee...........ee....eeeeeeeee.......eeeeeeee....ee.....eeee...eeeee..............ee......hhhhhh....ee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------RIBOSOMAL_L14  PDB: J:71-97----------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------ Transcript
                1qvg J    1 MEALGADVTQGLEKGSLITCADNTGARELKVISVHGYSGTKNRHPKAGLGDKITVSVTKGTPEMRRQVLEAVVVRQRKPIRRPDGTRVKFEDNAAVIVDENEDPRGTELKGPIAREVAQRFGSVASAATMIV  132
                                    10        20        30        40        50        60        70        80        90       100       110       120       130  

Chain K from PDB  Type:PROTEIN  Length:145
 aligned with RL15_HALMA | P12737 from UniProtKB/Swiss-Prot  Length:165

    Alignment length:150
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151
          RL15_HALMA      2 TSKKKRQRGSRTHGGGSHKNRRGAGHRGGRGDAGRDKHEFHNHEPLGKSGFKRPQKVQEEAATIDVREIDENVTLLAADDVAEVEDGGFRVDVRDVVEEADDADYVKVLGAGQVRHELTLIADDFSEGAREKVEGAGGSVELTDLGEERQ  151
               SCOP domains d1qvgk_ K: Ribosomal protein L15 (L15p)                                                                                                                SCOP domains
               CATH domains 1qvgK01 K:1-50                                    1qvgK02 K:51-149  [code=3.100.10.     10, no name defined]                                         - CATH domains
               Pfam domains ---------------Ribosomal_L18e-1qvgK01 K:16-143                                                                                                 ------- Pfam domains
         Sec.struct. author ..hhhhh...............hhhhhh.........................hhhhh..eeeeehhhhhhh...........-----.eee.hhh........eeeee.........eeee.eehhhhhhhhhhh..eeee........ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------------------------------------------RIBOSOMAL_L15  PDB: K:107-137  ------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                1qvg K    1 TSKKKRQRGSRTHGGGSHKNRRGAGHRGGRGDAGRDKHEFHNHEPLGKSGFKRPQKVQEEAATIDVREIDENVTLLAADDVAE-----FRVDVRDVVEEADDADYVKVLGAGQVRHELTLIADDFSEGAREKVEGAGGSVELTDLGEERQ  150
                                    10        20        30        40        50        60        70        80  |     90       100       110       120       130       140       150
                                                                                                             83    89                                                             

Chain L from PDB  Type:PROTEIN  Length:194
                                                                                                                                                                                                                                   
               SCOP domains d1qvgl_ L: Ribosomal protein L15e                                                                                                                                                                  SCOP domains
               CATH domains 1qvgL00 L:1-194 Ribosomal protein l15e                                                                                                                                                             CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhh...hhhhhhhhhhhhhhhh....eee.....hhhhhhhhh......eeeeeee...............hhhhh.........hhhhhhhhhhhhhh...eeeeeee........eeeeeee............hhhhhhhhhh.hhhhh.hhhhhhhh...............hhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1qvg L    1 ARSAYSYIREAWKRPKEGQIAELMWHRMQEWRNEPAVVRIERPTRLDRARSLGYKAKQGIIVVRVAIRKGSSRRTRFNKGRRSKRMMVNRITRKKNIQRIAEERANRKFPNLRVLNSYSVGEDGRHKWHEVILIDPDHPAIKSDDQLSWISRTRHRLRTFRGLTSAGRRCRGLRGQGKGSEKVRPSLRVNGAKA  194
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190    

Chain M from PDB  Type:PROTEIN  Length:186
 aligned with RL18_HALMA | P14123 from UniProtKB/Swiss-Prot  Length:187

    Alignment length:186
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181      
          RL18_HALMA      2 ATGPRYKVPMRRRREARTDYHQRLRLLKSGKPRLVARKSNKHVRAQLVTLGPNGDDTLASAHSSDLAEYGWEAPTGNMPSAYLTGLLAGLRAQEAGVEEAVLDIGLNSPTPGSKVFAIQEGAIDAGLDIPHNDDVLADWQRTRGAHIAEYDEQLEEPLYSGDFDAADLPEHFDELRETLLDGDIEL  187
               SCOP domains d1qvgm_ M: Ribosomal protein L18 (L18p)                                                                                                                                                    SCOP domains
               CATH domains 1qvgM00 M:1-186  [code=3.30.420.100, no name defined]                                                                                                                                      CATH domains
               Pfam domains --------Ribosomal_L18p-1qvgM01 M:9-129                                                                                           --------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhh...hhhhhhhhhhh...eeeeee....eeeeeee......eeeeeee...hhhhh......hhhhhhhhhhhhhhhhhhhh....eee.........hhhhhhhhhhhhh......hhhhh..hhhhhhhhhhhhhhh..............hhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                1qvg M    1 ATGPRYKVPMRRRREARTDYHQRLRLLKSGKPRLVARKSNKHVRAQLVTLGPNGDDTLASAHSSDLAEYGWEAPTGNMPSAYLTGLLAGLRAQEAGVEEAVLDIGLNSPTPGSKVFAIQEGAIDAGLDIPHNDDVLADWQRTRGAHIAEYDEQLEEPLYSGDFDAADLPEHFDELRETLLDGDIEL  186
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180      

Chain N from PDB  Type:PROTEIN  Length:115
 aligned with RL18E_HALMA | P12733 from UniProtKB/Swiss-Prot  Length:116

    Alignment length:115
                                    11        21        31        41        51        61        71        81        91       101       111     
         RL18E_HALMA      2 SKTNPRLSSLIADLKSAARSSGGAVWGDVAERLEKPRRTHAEVNLGRIERYAQEDETVVVPGKVLGSGVLQKDVTVAAVDFSGTAETKIDQVGEAVSLEQAIENNPEGSHVRVIR  116
               SCOP domains d1qvgn_ N: Ribosomal protein L18e                                                                                   SCOP domains
               CATH domains 1qvgN00 N:1-115  [code=3.100.10.10, no name defined]                                                                CATH domains
               Pfam domains ---------------------Ribosomal_L18e-1qvgN01 N:22-99                                                ---------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhheeeehhhhhhhh....eee..eeee.........eeee.eehhhhhhhhhhhheeeehhhhhhhh.....eee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ------------------------------RIBOSOMAL_L18E    ------------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------- Transcript
                1qvg N    1 SKTNPRLSSLIADLKSAARSSGGAVWGDVAERLEKPRRTHAEVNLGRIERYAQEDETVVVPGKVLGSGVLQKDVTVAAVDFSGTAETKIDQVGEAVSLEQAIENNPEGSHVRVIR  115
                                    10        20        30        40        50        60        70        80        90       100       110     

Chain O from PDB  Type:PROTEIN  Length:143
 aligned with RL19E_HALMA | P14119 from UniProtKB/Swiss-Prot  Length:149

    Alignment length:143
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141   
         RL19E_HALMA      2 TDLSAQKRLAADVLDVGKNRVWFNPERQGDIADAITREDVRELVDEGAIQAKDKKGNSRGRARERQKKRAYGHQKGAGSRKGKAGARQNSKEDWESRIRAQRTKLRELRDEGTLSSSQYRDLYDKAGGGEFDSVADLERYIDA  144
               SCOP domains d1qvgo_ O: Ribosomal protein L19 (L19e)                                                                                                         SCOP domains
               CATH domains 1qvgO01 O:1-55  [code=1.10.1650.10, no name defined]   1qvgO02 O:56-88 Single Heli x bin1qvgO03 O:89-143  [code=1.10.1200.60, no name defined]  CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhh..hhh.eee...hhhhhhhh.hhhhhhhhhhh..eee.......hhhhhhhhhhhhh....hhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhh.....hhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) -----RIBOSOMAL_L19E      ---------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1qvg O    1 TDLSAQKRLAADVLDVGKNRVWFNPERQGDIADAITREDVRELVDEGAIQAKDKKGNSRGRARERQKKRAKGHQKGAGSRKGKAGARQNSKEDWESRIRAQRTKLRELRDEGTLSSSQYRDLYDKAGGGEFDSVADLERYIDA  143
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140   

Chain P from PDB  Type:PROTEIN  Length:95
 aligned with RL21_HALMA | P12734 from UniProtKB/Swiss-Prot  Length:96

    Alignment length:95
                                    11        21        31        41        51        61        71        81        91     
          RL21_HALMA      2 PSSNGPLEGTRGKLKNKPRDRGTSPPQRAVEEFDDGEKVHLKIDPSVPNGRFHPRFDGQTGTVEGKQGDAYKVDIVDGGKEKTIIVTAAHLRRQE   96
               SCOP domains d1qvgp_ P: Ribosomal proteins L21e                                                              SCOP domains
               CATH domains 1qvgP00 P:1-95 Myosin S1 fragment SH3-like barrel                                               CATH domains
               Pfam domains Ribosomal_L21e-1qvgP01 P:1-95                                                                   Pfam domains
         Sec.struct. author ................hhhhh...hhhhhh.......eeee...........hhhhh..eeeeeeee..eeeeeeee..eeeeeeehhh.eee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) -----------------------------------RIBOSOMAL_L21E            ---------------------------------- PROSITE (3)
                 Transcript ----------------------------------------------------------------------------------------------- Transcript
                1qvg P    1 PSSNGPLEGTRGKLKNKPRDRGTSPPQRAVEEFDDGEKVHLKIDPSVPNGRFHPRFDGQTGTVEGKQGDAYKVDIVDGGKEKTIIVTAAHLRRQE   95
                                    10        20        30        40        50        60        70        80        90     

Chain Q from PDB  Type:PROTEIN  Length:150
 aligned with RL22_HALMA | P10970 from UniProtKB/Swiss-Prot  Length:155

    Alignment length:150
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151
          RL22_HALMA      2 GISYSVEADPDTTAKAMLRERQMSFKHSKAIAREIKGKTAGEAVDYLEAVIEGDQPVPFKQHNSGVGHKSKVDGWDAGRYPEKASKAFLDLLENAVGNADHQGFDGEAMTIKHVAAHKVGEQQGRKPRAMGRASAWNSPQVDVELILEEP  151
               SCOP domains d1qvgq_ Q: Ribosomal protein L22                                                                                                                       SCOP domains
               CATH domains 1qvgQ00 Q:1-150 Ribosomal Protein L22; Chain A                                                                                                         CATH domains
               Pfam domains ---------------Ribosomal_L22-1qvgQ01 Q:16-149                                                                                                        - Pfam domains
         Sec.struct. author ........hhh.eeeeeeeeee.hhhhhhhhhhhhh..hhhhhhhhhhhhhhh...ee...................ee.hhhhhhhhhhhhhhhhhhhhh...hhhhheeeeeeeeeeeee..eee.hhh.eee..eeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE (2)
                PROSITE (3) --------------------------------------------------------------------------------------------------------------------------RIBOSOMAL_L22            --- PROSITE (3)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                1qvg Q    1 GISYSVEADPDTTAKAMLRERQMSFKHSKAIAREIKGKTAGEAVDYLEAVIEGDQPVPFKQHNSGVGHKSKVDGWDAGRYPEKASKAFLDLLENAVGNADHQGFDGEAMTIKHVAAHKVGEQQGRKPRAMGRASAWNSPQVDVELILEEP  150
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150

Chain R from PDB  Type:PROTEIN  Length:81
 aligned with RL23_HALMA | P12732 from UniProtKB/Swiss-Prot  Length:85

    Alignment length:81
                                    11        21        31        41        51        61        71        81 
          RL23_HALMA      2 SWDVIKHPHVTEKAMNDMDFQNKLQFAVDDRASKGEVADAVEEQYDVTVEQVNTQNTMDGEKKAVVRLSEDDDAQEVASRI   82
               SCOP domains d1qvgr_ R: Ribosomal protein L23                                                  SCOP domains
               CATH domains 1qvgR00 R:1-81  [code=3.30.70.330, no name defined]                               CATH domains
               Pfam domains -Ribosomal_L23-1qvgR01 R:2-81                                                     Pfam domains
         Sec.struct. author ....eeee..hhhhhhhhhhhheeeeee....hhhhhhhhhhhhhh..eeeeeeee.....eeeeeee....hhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) --------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) --------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) -------------------------------------------------------------RIBOSOMAL_L23   ---- PROSITE (4)
                 Transcript --------------------------------------------------------------------------------- Transcript
                1qvg R    1 SWDVIKHPHVTEKAMNDMDFQNKLQFAVDDRASKGEVADAVEEQYDVTVEQVNTQNTMDGEKKAVVRLSEDDDAQEVASRI   81
                                    10        20        30        40        50        60        70        80 

Chain S from PDB  Type:PROTEIN  Length:119
 aligned with RL24_HALMA | P10972 from UniProtKB/Swiss-Prot  Length:120

    Alignment length:119
                                    11        21        31        41        51        61        71        81        91       101       111         
          RL24_HALMA      2 SKQPDKQRKSQRRAPLHERHKQVRATLSADLREEYGQRNVRVNAGDTVEVLRGDFAGEEGEVINVDLDKAVIHVEDVTLEKTDGEEVPRPLDTSNVRVTDLDLEDEKREARLESEDDSA  120
               SCOP domains d1qvgs_ S: Ribosomal proteins L24 (L24p)                                                                                SCOP domains
               CATH domains 1qvgS00 S:1-119  [code=2.30.30.30, no name defined]                                                                     CATH domains
               Pfam domains -------------------------------------------KOW-1qvgS01 S:44-75             -------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhh.eeeehhhhhhhhh..eee.....eeee........eeeeeeee....eeee...eee.....eee...hhh.eeeee....hhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------RIBOSOMAL_L24     --------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------- Transcript
                1qvg S    1 SKQPDKQRKSQRRAPLHERHKQVRATLSADLREEYGQRNVRVNAGDTVEVLRGDFAGEEGEVINVDLDKAVIHVEDVTLEKTDGEEVPRPLDTSNVRVTDLDLEDEKREARLESEDDSA  119
                                    10        20        30        40        50        60        70        80        90       100       110         

Chain T from PDB  Type:PROTEIN  Length:53
 aligned with RL24E_HALMA | P14116 from UniProtKB/Swiss-Prot  Length:67

    Alignment length:53
                                    14        24        34        44        54   
         RL24E_HALMA      5 RECDYCGTDIEPGTGTMFVHKDGATTHFCSSKCENNADLGREARNLEWTDTAR   57
               SCOP domains d1qvgt_ T: Ribosomal protein L24e                     SCOP domains
               CATH domains 1qvgT00 T:4-56  [code=2.30.170.20, no name defined]   CATH domains
               Pfam domains Ribosomal_L24e-1qvgT01 T:4-56                         Pfam domains
         Sec.struct. author ...............eeee.....eeee.hhhhhhhhhh..hhhhh....... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------- PROSITE (2)
                PROSITE (3) ----RIBOSOMAL_L24E    ------------------------------- PROSITE (3)
                 Transcript ----------------------------------------------------- Transcript
                1qvg T    4 RECDYCGTDIEPGTGTMFVHKDGATTHFCSSKCENNADLGREARNLEWTDTAR   56
                                    13        23        33        43        53   

Chain U from PDB  Type:PROTEIN  Length:65
 aligned with RL29_HALMA | P10971 from UniProtKB/Swiss-Prot  Length:71

    Alignment length:65
                                    11        21        31        41        51        61     
          RL29_HALMA      2 TVLHVQEIRDMTPAEREAELDDLKTELLNARAVQAAGGAPENPGRIKELRKAIARIKTIQGEEGD   66
               SCOP domains d1qvgu_ U: Ribosomal protein L29 (L29p)                           SCOP domains
               CATH domains 1qvgU00 U:1-65  [code=1.10.287.310, no name defined]              CATH domains
               Pfam domains ----Ribosomal_L29-1qvgU01 U:5-63                               -- Pfam domains
         Sec.struct. author ...hhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ----------------------------------------------------------------- PROSITE (3)
                PROSITE (4) ----------------------------------------------------------------- PROSITE (4)
                PROSITE (5) -----------------------------------------RIBOSOMAL_L29  --------- PROSITE (5)
                 Transcript ----------------------------------------------------------------- Transcript
                1qvg U    1 TVLHVQEIRDMTPAEREAELDDLKTELLNARAVQAAGGAPENPGRIKELRKAIARIKTIQGEEGD   65
                                    10        20        30        40        50        60     

Chain V from PDB  Type:PROTEIN  Length:154
 aligned with RL30_HALMA | P14121 from UniProtKB/Swiss-Prot  Length:154

    Alignment length:154
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150    
          RL30_HALMA      1 MHALVQLRGEVNMHTDIQDTLEMLNIHHVNHCTLVPETDAYRGMVAKVNDFVAFGEPSQETLETVLATRAEPLEGDADVDDEWVAEHTDYDDISGLAFALLSEETTLREQGLSPTLRLHPPRGGHDGVKHPVKEGGQLGKHDTEGIDDLLEAMR  154
               SCOP domains d1qvgv_ V: Archaeal L30 (L30a)                                                                                                                             SCOP domains
               CATH domains 1qvgV01 V:1-57,V:114-154                                 1qvgV02 V:58-113  [code=1.10.15.30, no name defined]    1qvgV01 V:1-57,V:114-154                  CATH domains
               Pfam domains Ribosomal_L30-1qvgV01 V:1-52                        ------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeee.......hhhhhhhhhhh......eeeee..hhhhhhhhhhhh..eeee..hhhhhhhhhhhhh.........hhhhhhhhh...hhhhhhhhhhh.............ee.............hhhhh...ee.hhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ---------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ---------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) -------------------RIBOSOMAL_L30  PDB: V:20-52      ------------------------------------------------------------------------------------------------------ PROSITE (4)
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1qvg V    1 MHALVQLRGEVNMHTDIQDTLEMLNIHHVNHCTLVPETDAYRGMVAKVNDFVAFGEPSQETLETVLATRAEPLEGDADVDDEWVAEHTDYDDISGLAFALLSEETTLREQGLSPTLRLHPPRGGHDGVKHPVKEGGQLGKHDTEGIDDLLEAMR  154
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150    

Chain W from PDB  Type:PROTEIN  Length:82
 aligned with RL31_HALMA | P18138 from UniProtKB/Swiss-Prot  Length:92

    Alignment length:82
                                    17        27        37        47        57        67        77        87  
          RL31_HALMA      8 ERVVTIPLRDARAEPNHKRADKAMILIREHLAKHFSVDEDAVRLDPSINEAAWARGRANTPSKIRVRAARFEEEGEAIVEAE   89
               SCOP domains d1qvgw_ W: Ribosomal protein L31e                                                  SCOP domains
               CATH domains 1qvgW00 W:7-88  [code=3.10.440.10, no name defined]                                CATH domains
               Pfam domains Ribosomal_L31e-1qvgW01 W:7-87                                                    - Pfam domains
         Sec.struct. author .eeeeee.hhhhh.hhhhhhhhhhhhhhhhhhhhh......eeehhhhhhhhh.........eeeeeeeee....eeeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) -----------------------------------------RIBOSOMAL_L31E -------------------------- PROSITE (2)
                 Transcript ---------------------------------------------------------------------------------- Transcript
                1qvg W    7 ERVVTIPLRDARAEPNHKRADKAMILIREHLAKHFSVDEDAVRLDPSINEAAWARGRANTPSKIRVRAARFEEEGEAIVEAE   88
                                    16        26        36        46        56        66        76        86  

Chain X from PDB  Type:PROTEIN  Length:142
 aligned with RL32_HALMA | P12736 from UniProtKB/Swiss-Prot  Length:241

    Alignment length:142
                                   105       115       125       135       145       155       165       175       185       195       205       215       225       235  
          RL32_HALMA     96 TELQARGLTEKTPDLSDEDARLLTQRHRVGKPQFNRQDHHKKKRVSTSWRKPRGQLSKQRRGIKGKGDTVEAGFRSPTAVRGKHPSGFEEVRVHNVDDLEGVDGDTEAVRIASKVGARKRERIEEEAEDAGIRVLNPTYVEV  237
               SCOP domains d1qvgx_ X: Ribosomal protein L32e                                                                                                              SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -----------------------------Ribosomal_L32e-1qvgX01 X:124-231                                                                            ----- Pfam domains
         Sec.struct. author .eeee..........hhhhhhhhhhhhhhh........................................hhhhh.............eeeee..hhhhh......eeeee....hhhhhhhhhhhhhhh........eeee Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ---------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ---------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) ---------------------------------RIBOSOMAL_L32E       ---------------------------------------------------------------------------------------- PROSITE (4)
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1qvg X   95 TELQARGLTEKTPDLSDEDARLLTQRHRVGKPQFNRQDHHKKKRVSTSWRKPRGQLSKQRRGIKGKGDTVEAGFRSPTAVRGKHPSGFEEVRVHNVDDLEGVDGDTEAVRIASKVGARKRERIEEEAEDAGIRVLNPTYVEV  236
                                   104       114       124       134       144       154       164       174       184       194       204       214       224       234  

Chain Y from PDB  Type:PROTEIN  Length:73
                                                                                                          
               SCOP domains d1qvgy_ Y: Ribosomal protein L37ae                                        SCOP domains
               CATH domains 1qvgY00 Y:10-82  [code=2.20.25.30, no name defined]                       CATH domains
               Pfam domains ------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhh...hhhhhhhhhhhhhhhhh...........eeeee..eeee.....eee.......hhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------- Transcript
                1qvg Y   10 RTGRFGPRYGLKIRVRVADVEIKHKKKHKCPVCGFKKLKRAGTGIWMCGHCGYKIAGGCYQPETVAGKAVMKA   82
                                    19        29        39        49        59        69        79   

Chain Z from PDB  Type:PROTEIN  Length:56
 aligned with RL37_HALMA | P32410 from UniProtKB/Swiss-Prot  Length:57

    Alignment length:56
                                    11        21        31        41        51      
          RL37_HALMA      2 TGAGTPSQGKKNTTTHTKCRRCGEKSYHTKKKVCSSCGFGKSAKRRDYEWQSKAGE   57
               SCOP domains d1qvgz_ Z: Ribosomal protein L37e                        SCOP domains
               CATH domains 1qvgZ00 Z:1-56  [code=2.20.25.30, no name defined]       CATH domains
               Pfam domains -Ribosomal_L37e-1qvgZ01 Z:2-56                           Pfam domains
         Sec.struct. author ...hhhhh.......eee......eeee....ee.............hhhhh.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---RIBOSOMAL_L37E      --------------------------------- PROSITE
                 Transcript -------------------------------------------------------- Transcript
                1qvg Z    1 TGAGTPSQGKKNTTTHTKCRRCGEKSYHTKKKVCSSCGFGKSAKRRDYEWQSKAGE   56
                                    10        20        30        40        50      

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (29, 30)

Asymmetric/Biological Unit
(-)
Fold: RL5-like (90)
(-)
Class: Peptides (792)

(-) CATH Domains  (32, 36)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (23, 25)

Asymmetric/Biological Unit
(-)
Clan: KOW (56)
(-)
Clan: OB (224)
(-)
Clan: RRM (206)
(-)
Clan: Ribo_L29 (45)
(-)
Clan: S11_L18p (67)
(-)
Clan: TRASH (61)

(-) Gene Ontology  (23, 225)

Asymmetric/Biological Unit(hide GO term definitions)
Chain 1   (RL39_HALMA | P22452)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain 2   (RL44E_HALMA | P32411)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0070180    large ribosomal subunit rRNA binding    Interacting selectively and non-covalently with the large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
    GO:0000049    tRNA binding    Interacting selectively and non-covalently with transfer RNA.
    GO:0008270    zinc ion binding    Interacting selectively and non-covalently with zinc (Zn) ions.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain A   (RL2_HALMA | P20276)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0015934    large ribosomal subunit    The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site).
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain B   (RL3_HALMA | P20279)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain C   (RL4_HALMA | P12735)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain D   (RL5_HALMA | P14124)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
    GO:0000049    tRNA binding    Interacting selectively and non-covalently with transfer RNA.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain E   (RL6_HALMA | P14135)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain F   (RL7A_HALMA | P12743)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0004526    ribonuclease P activity    Catalysis of the endonucleolytic cleavage of RNA, removing 5' extra nucleotides from tRNA precursor.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0090501    RNA phosphodiester bond hydrolysis    The RNA metabolic process in which the phosphodiester bonds between ribonucleotides are cleaved by hydrolysis.
    GO:0090502    RNA phosphodiester bond hydrolysis, endonucleolytic    The chemical reactions and pathways involving the hydrolysis of internal 3',5'-phosphodiester bonds in one or two strands of ribonucleotides.
    GO:0042254    ribosome biogenesis    A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits; includes transport to the sites of protein synthesis.
    GO:0001682    tRNA 5'-leader removal    Generation of the mature 5'-end of the tRNA, usually via an endonucleolytic cleavage by RNase P.
    GO:0008033    tRNA processing    The process in which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group.
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain G   (RL10_HALMA | P15825)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0070180    large ribosomal subunit rRNA binding    Interacting selectively and non-covalently with the large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
biological process
    GO:0042254    ribosome biogenesis    A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits; includes transport to the sites of protein synthesis.
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain I   (RL13_HALMA | P29198)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0015934    large ribosomal subunit    The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site).
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain J   (RL14_HALMA | P22450)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain K   (RL15_HALMA | P12737)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0015934    large ribosomal subunit    The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site).
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain M   (RL18_HALMA | P14123)
molecular function
    GO:0008097    5S rRNA binding    Interacting selectively and non-covalently with 5S ribosomal RNA, the smallest RNA constituent of a ribosome.
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain N   (RL18E_HALMA | P12733)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain O   (RL19E_HALMA | P14119)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0070180    large ribosomal subunit rRNA binding    Interacting selectively and non-covalently with the large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain P   (RL21_HALMA | P12734)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain Q   (RL22_HALMA | P10970)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0015934    large ribosomal subunit    The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site).
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain R   (RL23_HALMA | P12732)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small