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Class: All beta proteins (24004)
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Fold: OB-fold (1179)
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Superfamily: Nucleic acid-binding proteins (590)
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Family: Cold shock DNA-binding domain-like (310)
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Protein domain: Archaeal initiation factor-1a, aIF1a (1)
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Methanococcus jannaschii [TaxId: 2190] (1)
1JT8A:ARCHAEAL INITIATION FACTOR-1A, AIF-1A
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Protein domain: automated matches (4)
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Mycobacterium tuberculosis [TaxId: 83332] (1)
3I4OA:; B:CRYSTAL STRUCTURE OF TRANSLATION INITIATION FACTOR 1 FROM MYCOBACTERIUM TUBERCULOSIS
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Neisseria meningitidis [TaxId: 122586] (1)
3CAMA:; B:CRYSTAL STRUCTURE OF THE COLD SHOCK DOMAIN PROTEIN FROM NEISSERIA MENINGITIDIS
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Salmonella typhimurium [TaxId: 90371] (1)
3I2ZA:; B:STRUCTURE OF COLD SHOCK PROTEIN E FROM SALMONELLA TYPHIMURIUM
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Thermus thermophilus HB8 [TaxId: 300852] (1)
3A0JA:; B:CRYSTAL STRUCTURE OF COLD SHOCK PROTEIN 1 FROM THERMUS THERMOPHILUS HB8
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Protein domain: C-terminal domain of eIF5a homologue (Hex1) (1)
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Fungus (Neurospora crassa) [TaxId: 5141] (1)
1KHIA:103-173CRYSTAL STRUCTURE OF HEX1
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Protein domain: C-terminal domain of eukaryotic initiation translation factor 5a (eIF5a) (6)
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Leishmania infantum [TaxId: 5671] (1)
1X6OA:87-165STRUCTURAL ANALYSIS OF LEISHMANIA BRAZILIENSIS EUKARYOTIC INITIATION FACTOR 5A
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Methanococcus jannaschii [TaxId: 2190] (2)
1EIFA:74-133EUKARYOTIC TRANSLATION INITIATION FACTOR 5A FROM METHANOCOCCUS JANNASCHII
2EIFA:74-132EUKARYOTIC TRANSLATION INITIATION FACTOR 5A FROM METHANOCOCCUS JANNASCHII
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Pyrobaculum aerophilum [TaxId: 13773] (1)
1BKBA:75-139INITIATION FACTOR 5A FROM ARCHEBACTERIUM PYROBACULUM AEROPHILUM
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Pyrococcus horikoshii [TaxId: 53953] (1)
1IZ6A:71-137; B:71-137; C:71-136CRYSTAL STRUCTURE OF TRANSLATION INITIATION FACTOR 5A FROM PYROCOCCUS HORIKOSHII
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Trypanosome (Leishmania mexicana) [TaxId: 5665] (1)
1XTDA:95-172STRUCTURAL ANALYSIS OF LEISHMANIA MEXICANA EUKARYOTIC INITIATION FACTOR 5A
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Protein domain: C-terminal domain of RNA polymerase II subunit RBP7 (RpoE) (8)
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Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (6)
1Y14B:81-171; D:81-171CRYSTAL STRUCTURE OF YEAST SUBCOMPLEX OF RPB4 AND RPB7
2B8KG:81-17112-SUBUNIT RNA POLYMERASE II
2JA5G:81-171CPD LESION CONTAINING RNA POLYMERASE II ELONGATION COMPLEX A
2JA6G:81-171CPD LESION CONTAINING RNA POLYMERASE II ELONGATION COMPLEX B
2JA7G:81-171; S:81-171CPD LESION CONTAINING RNA POLYMERASE II ELONGATION COMPLEX C
2JA8G:81-171CPD LESION CONTAINING RNA POLYMERASE II ELONGATION COMPLEX D
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Human (Homo sapiens) [TaxId: 9606] (1)
2C35B:78-171; D:78-171; F:78-171; H:78-171SUBUNITS RPB4 AND RPB7 OF HUMAN RNA POLYMERASE II
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Methanococcus jannaschii [TaxId: 2190] (1)
1GO3E:79-184; M:79-181STRUCTURE OF AN ARCHEAL HOMOLOG OF THE EUKARYOTIC RNA POLYMERASE II RPB4/RPB7 COMPLEX
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Protein domain: Cold shock domain protein E1 (UNR) (1)
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Human (Homo sapiens) [TaxId: 9606] (1)
1WFQA:SOLUTION STRUCTURE OF THE FIRST COLD-SHOCK DOMAIN OF THE HUMAN KIAA0885 PROTEIN (UNR PROTEIN)
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Protein domain: Elongation factor P middle and C-terminal domains (1)
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Thermus thermophilus HB8 [TaxId: 300852] (1)
1UEBA:64-126; A:127-184; B:264-326; B:327-384CRYSTAL STRUCTURE OF TRANSLATION ELONGATION FACTOR P FROM THERMUS THERMOPHILUS HB8
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Protein domain: Eukaryotic initiation factor 2alpha, eIF2alpha, N-terminal domain (5)
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Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (1)
1Q46A:2-88CRYSTAL STRUCTURE OF THE EIF2 ALPHA SUBUNIT FROM SACCHAROMYCES CEREVISIA
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Human (Homo sapiens) [TaxId: 9606] (2)
1KL9A:3-88CRYSTAL STRUCTURE OF THE N-TERMINAL SEGMENT OF HUMAN EUKARYOTIC INITIATION FACTOR 2ALPHA
1Q8KA:3-88SOLUTION STRUCTURE OF ALPHA SUBUNIT OF HUMAN EIF2
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Sulfolobus solfataricus [TaxId: 2287] (2)
2AHOB:1-84STRUCTURE OF THE ARCHAEAL INITIATION FACTOR EIF2 ALPHA-GAMMA HETERODIMER FROM SULFOLOBUS SOLFATARICUS COMPLEXED WITH GDPNP
3CW2C:1-84; D:1-84; G:1-84; H:1-84CRYSTAL STRUCTURE OF THE INTACT ARCHAEAL TRANSLATION INITIATION FACTOR 2 FROM SULFOLOBUS SOLFATARICUS .
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Protein domain: Exoribonuclease 2, RNB (3)
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Escherichia coli [TaxId: 562] (3)
2ID0A:558-644; C:83-172; C:5-82; D:558-644; D:83-172; D:5-82; A:83-172; A:5-82; B:558-644; B:83-172; B:5-82; C:558-644ESCHERICHIA COLI RNASE II
2IX0A:83-172; A:4-82; A:558-644RNASE II
2IX1A:83-172; A:558-643; A:1-82RNASE II D209N MUTANT
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Protein domain: Exosome complex exonuclease RRP44 (1)
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Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (1)
2VNUD:400-494; D:911-998; D:252-399CRYSTAL STRUCTURE OF SC RRP44
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Protein domain: Exosome component 1, EXOSC1 (1)
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Human (Homo sapiens) [TaxId: 9606] (1)
2NN6I:61-185STRUCTURE OF THE HUMAN RNA EXOSOME COMPOSED OF RRP41, RRP45, RRP46, RRP43, MTR3, RRP42, CSL4, RRP4, AND RRP40
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Protein domain: Major cold shock protein (21)
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Bacillus caldolyticus [TaxId: 1394] (7)
1C9OA:; B:CRYSTAL STRUCTURE ANALYSIS OF THE BACILLUS CALDOLYTICUS COLD SHOCK PROTEIN BC-CSP
1HZ9A:; B:BACILLUS CALDOLYTICUS COLD-SHOCK PROTEIN MUTANTS TO STUDY DETERMINANTS OF PROTEIN STABILITY
1HZAA:; B:BACILLUS CALDOLYTICUS COLD-SHOCK PROTEIN MUTANTS TO STUDY DETERMINANTS OF PROTEIN STABILITY
1HZBA:; B:BACILLUS CALDOLYTICUS COLD-SHOCK PROTEIN MUTANTS TO STUDY DETERMINANTS OF PROTEIN STABILITY
1HZCA:; B:BACILLUS CALDOLYTICUS COLD-SHOCK PROTEIN MUTANTS TO STUDY DETERMINANTS OF PROTEIN STABILITY
1I5FA:; B:BACILLUS CALDOLYTICUS COLD-SHOCK PROTEIN MUTANTS TO STUDY DETERMINANTS OF PROTEIN STABILITY
2HAXA:; B:CRYSTAL STRUCTURE OF BACILLUS CALDOLYTICUS COLD SHOCK PROTEIN IN COMPLEX WITH HEXATHYMIDINE
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Bacillus subtilis [TaxId: 1423] (10)
1CSPA:CRYSTAL STRUCTURE OF THE BACILLUS SUBTILIS MAJOR COLD SHOCK PROTEIN, CSPB: A UNIVERSAL NUCLEIC-ACID BINDING DOMAIN
1CSQA:CRYSTAL STRUCTURE OF THE BACILLUS SUBTILIS MAJOR COLD SHOCK PROTEIN, CSPB: A UNIVERSAL NUCLEIC-ACID BINDING DOMAIN
1NMFA:MAJOR COLD-SHOCK PROTEIN, NMR, 20 STRUCTURES
1NMGA:MAJOR COLD-SHOCK PROTEIN, NMR, MINIMIZED AVERAGE STRUCTURE
2ES2A:CRYSTAL STRUCTURE ANALYSIS OF THE BACILLUS SUBTILIS COLD SHOCK PROTEIN BS-CSPB IN COMPLEX WITH HEXATHYMIDINE
2F52A:SOLUTION STRUCTURE OF COLD SHOCK PROTEIN CSPB FROM BACILLUS SUBTILIS IN COMPLEX WITH HEPTATHYMIDINE
2I5LX:CRYSTAL STRUCTURE OF BACILLUS SUBTILIS COLD SHOCK PROTEIN VARIANT BS-CSPB M1R/E3K/K65I
2I5MX:CRYSTAL STRUCTURE OF BACILLUS SUBTILIS COLD SHOCK PROTEIN CSPB VARIANT A46K S48R
3PF4A:; B:CRYSTAL STRUCTURE OF BS-CSPB IN COMPLEX WITH R(GUCUUUA)
3PF5A:; B:CRYSTAL STRUCTURE OF BS-CSPB IN COMPLEX WITH RU6
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Escherichia coli [TaxId: 562] (3)
1MJCA:CRYSTAL STRUCTURE OF CSPA, THE MAJOR COLD SHOCK PROTEIN OF ESCHERICHIA COLI
2L15A:SOLUTION STRUCTURE OF COLD SHOCK PROTEIN CSPA USING COMBINED NMR AND CS-ROSETTA METHOD
3MEFA:MAJOR COLD-SHOCK PROTEIN FROM ESCHERICHIA COLI SOLUTION NMR STRUCTURE
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Thermotoga maritima [TaxId: 2336] (1)
1G6PA:SOLUTION NMR STRUCTURE OF THE COLD SHOCK PROTEIN FROM THE HYPERTHERMOPHILIC BACTERIUM THERMOTOGA MARITIMA
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Protein domain: N-terminal domain of ribosomal protein L2 (79)
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Bacillus stearothermophilus [TaxId: 1422] (1)
1RL2A:60-125; B:60-125RIBOSOMAL PROTEIN L2 RNA-BINDING DOMAIN FROM BACILLUS STEAROTHERMOPHILUS
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Deinococcus radiodurans [TaxId: 1299] (5)
1XBPA:33-127INHIBITION OF PEPTIDE BOND FORMATION BY PLEUROMUTILINS: THE STRUCTURE OF THE 50S RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS IN COMPLEX WITH TIAMULIN
2ZJPA:33-127THIOPEPTIDE ANTIBIOTIC NOSIHEPTIDE BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF DEINOCOCCUS RADIODURANS
2ZJQA:33-127INTERACTION OF L7 WITH L11 INDUCED BY MICROCCOCIN BINDING TO THE DEINOCOCCUS RADIODURANS 50S SUBUNIT
2ZJRA:33-127REFINED NATIVE STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT (50S) FROM DEINOCOCCUS RADIODURANS
3CF5A:33-127THIOPEPTIDE ANTIBIOTIC THIOSTREPTON BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF DEINOCOCCUS RADIODURANS
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Escherichia coli [TaxId: 562] (27)
2J28C:61-124MODEL OF E. COLI SRP BOUND TO 70S RNCS
2RDOC:61-12450S SUBUNIT WITH EF-G(GDPNP) AND RRF BOUND
3BBXC:61-124THE HSP15 PROTEIN FITTED INTO THE LOW RESOLUTION CRYO-EM MAP OF THE 50S.NC-TRNA.HSP15 COMPLEX
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Haloarcula marismortui [TaxId: 2238] (40)
1FFKA:1-90CRYSTAL STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT FROM HALOARCULA MARISMORTUI AT 2.4 ANGSTROM RESOLUTION
1JJ2A:1-90FULLY REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION
1K73C:1-90CO-CRYSTAL STRUCTURE OF ANISOMYCIN BOUND TO THE 50S RIBOSOMAL SUBUNIT
1K8AC:1-90CO-CRYSTAL STRUCTURE OF CARBOMYCIN A BOUND TO THE 50S RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1K9MC:1-90CO-CRYSTAL STRUCTURE OF TYLOSIN BOUND TO THE 50S RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1KC8C:1-90CO-CRYSTAL STRUCTURE OF BLASTICIDIN S BOUND TO THE 50S RIBOSOMAL SUBUNIT
1KD1C:1-90CO-CRYSTAL STRUCTURE OF SPIRAMYCIN BOUND TO THE 50S RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1KQSA:1-90THE HALOARCULA MARISMORTUI 50S COMPLEXED WITH A PRETRANSLOCATIONAL INTERMEDIATE IN PROTEIN SYNTHESIS
1M1KC:1-90CO-CRYSTAL STRUCTURE OF AZITHROMYCIN BOUND TO THE 50S RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1M90C:1-90CO-CRYSTAL STRUCTURE OF CCA-PHE-CAPROIC ACID-BIOTIN AND SPARSOMYCIN BOUND TO THE 50S RIBOSOMAL SUBUNIT
1N8RC:1-90STRUCTURE OF LARGE RIBOSOMAL SUBUNIT IN COMPLEX WITH VIRGINIAMYCIN M
1NJIC:1-90STRUCTURE OF CHLORAMPHENICOL BOUND TO THE 50S RIBOSOMAL SUBUNIT
1Q7YC:1-90CRYSTAL STRUCTURE OF CCDAP-PUROMYCIN BOUND AT THE PEPTIDYL TRANSFERASE CENTER OF THE 50S RIBOSOMAL SUBUNIT
1Q81C:1-90CRYSTAL STRUCTURE OF MINIHELIX WITH 3' PUROMYCIN BOUND TO A-SITE OF THE 50S RIBOSOMAL SUBUNIT.
1Q82C:1-90CRYSTAL STRUCTURE OF CC-PUROMYCIN BOUND TO THE A-SITE OF THE 50S RIBOSOMAL SUBUNIT
1Q86C:1-90CRYSTAL STRUCTURE OF CCA-PHE-CAP-BIOTIN BOUND SIMULTANEOUSLY AT HALF OCCUPANCY TO BOTH THE A-SITE AND P-SITE OF THE THE 50S RIBOSOMAL SUBUNIT.
1QVFA:1-90STRUCTURE OF A DEACYLATED TRNA MINIHELIX BOUND TO THE E SITE OF THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1QVGA:1-90STRUCTURE OF CCA OLIGONUCLEOTIDE BOUND TO THE TRNA BINDING SITES OF THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1S72A:1-90REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION
1VQ4A:1-90THE STRUCTURE OF THE TRANSITION STATE ANALOGUE "DAA" BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1VQ5A:1-90THE STRUCTURE OF THE TRANSITION STATE ANALOGUE "RAA" BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1VQ6A:1-90THE STRUCTURE OF C-HPMN AND CCA-PHE-CAP-BIO BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1VQ7A:1-90THE STRUCTURE OF THE TRANSITION STATE ANALOGUE "DCA" BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1VQ8A:1-90THE STRUCTURE OF CCDA-PHE-CAP-BIO AND THE ANTIBIOTIC SPARSOMYCIN BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1VQ9A:1-90THE STRUCTURE OF CCA-PHE-CAP-BIO AND THE ANTIBIOTIC SPARSOMYCIN BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1VQKA:1-90THE STRUCTURE OF CCDA-PHE-CAP-BIO BOUND TO THE A SITE OF THE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1VQLA:1-90THE STRUCTURE OF THE TRANSITION STATE ANALOGUE "DCSN" BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1VQMA:1-90THE STRUCTURE OF THE TRANSITION STATE ANALOGUE "DAN" BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1VQNA:1-90THE STRUCTURE OF CC-HPMN AND CCA-PHE-CAP-BIO BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1VQOA:1-90THE STRUCTURE OF CCPMN BOUND TO THE LARGE RIBOSOMAL SUBUNIT HALOARCULA MARISMORTUI
1VQPA:1-90THE STRUCTURE OF THE TRANSITION STATE ANALOGUE "RAP" BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1YHQA:1-90CRYSTAL STRUCTURE OF AZITHROMYCIN BOUND TO THE G2099A MUTANT 50S RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1YI2A:1-90CRYSTAL STRUCTURE OF ERYTHROMYCIN BOUND TO THE G2099A MUTANT 50S RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1YIJA:1-90CRYSTAL STRUCTURE OF TELITHROMYCIN BOUND TO THE G2099A MUTANT 50S RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1YITA:1-90CRYSTAL STRUCTURE OF VIRGINIAMYCIN M AND S BOUND TO THE 50S RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1YJ9A:1-90CRYSTAL STRUCTURE OF THE MUTANT 50S RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI CONTAINING A THREE RESIDUE DELETION IN L22
1YJNA:1-90CRYSTAL STRUCTURE OF CLINDAMYCIN BOUND TO THE G2099A MUTANT 50S RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
1YJWA:1-90CRYSTAL STRUCTURE OF QUINUPRISTIN BOUND TO THE G2099A MUTANT 50S RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
2OTJA:1-9013-DEOXYTEDANOLIDE BOUND TO THE LARGE SUBUNIT OF HALOARCULA MARISMORTUI
2OTLA:1-90GIRODAZOLE BOUND TO THE LARGE SUBUNIT OF HALOARCULA MARISMORTUI
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Protein domain: Probable GTPase EngC (YjeQ), N-terminal domain (2)
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Bacillus subtilis [TaxId: 1423] (1)
1T9HA:1-67THE CRYSTAL STRUCTURE OF YLOQ, A CIRCULARLY PERMUTED GTPASE.
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Thermotoga maritima [TaxId: 2336] (1)
1U0LA:3-68; B:303-368; C:603-668CRYSTAL STRUCTURE OF YJEQ FROM THERMOTOGA MARITIMA
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Protein domain: Rho termination factor, RNA-binding domain (9)
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Escherichia coli [TaxId: 562] (9)
1A62A:48-125CRYSTAL STRUCTURE OF THE RNA-BINDING DOMAIN OF THE TRANSCRIPTIONAL TERMINATOR PROTEIN RHO
1A63A:48-130THE NMR STRUCTURE OF THE RNA BINDING DOMAIN OF E.COLI RHO FACTOR SUGGESTS POSSIBLE RNA-PROTEIN INTERACTIONS, 10 STRUCTURES
1A8VA:48-118; B:48-118STRUCTURE OF THE RNA-BINDING DOMAIN OF THE RHO TRANSCRIPTION TERMINATOR
1PV4A:48-126; B:51-126; C:48-126; D:48-126; E:48-126; F:48-126X-RAY CRYSTAL STRUCTURE OF THE RHO TRANSCRIPTION TERMINATION FACTOR IN COMPLEX WITH SINGLE STRANDED DNA
1PVOA:48-126; B:51-126; C:48-126; D:48-126; E:48-126; F:48-126X-RAY CRYSTAL STRUCTURE OF RHO TRANSCRIPTION TERMINATION FACTOR IN COMPLEX WITH SSRNA SUBSTRATE AND ANPPNP
1XPOA:48-129; B:48-129; C:48-129; D:48-129; E:48-129; F:48-129STRUCTURAL MECHANISM OF INHIBITION OF THE RHO TRANSCRIPTION TERMINATION FACTOR BY THE ANTIBIOTIC BICYCLOMYCIN
1XPRA:48-126; B:48-126; C:48-126; D:48-126; E:48-126; F:48-126STRUCTURAL MECHANISM OF INHIBITION OF THE RHO TRANSCRIPTION TERMINATION FACTOR BY THE ANTIBIOTIC 5A-FORMYLBICYCLOMYCIN (FB)
1XPUA:48-126; E:48-126; F:48-126; B:48-126; C:48-126; D:48-126STRUCTURAL MECHANISM OF INHIBITION OF THE RHO TRANSCRIPTION TERMINATION FACTOR BY THE ANTIBIOTIC 5A-(3-FORMYLPHENYLSULFANYL)-DIHYDROBICYCLOMYCIN (FPDB)
2A8VA:48-118; B:48-118; C:48-118RHO TRANSCRIPTION TERMINATION FACTOR/RNA COMPLEX
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Protein domain: Ribonuclease II family protein DR0020 (2)
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Deinococcus radiodurans [TaxId: 1299] (2)
2R7DA:404-461; B:404-461; C:404-461CRYSTAL STRUCTURE OF RIBONUCLEASE II FAMILY PROTEIN FROM DEINOCOCCUS RADIODURANS, TRICLINIC CRYSTAL FORM. NORTHEAST STRUCTURAL GENOMICS TARGET DRR63
2R7FA:404-461CRYSTAL STRUCTURE OF RIBONUCLEASE II FAMILY PROTEIN FROM DEINOCOCCUS RADIODURANS, HEXAGONAL CRYSTAL FORM. NORTHEAST STRUCTURAL GENOMICS TARGET DRR63
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Protein domain: Ribosomal protein S12 (61)
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Escherichia coli [TaxId: 562] (25)
3DEGD:1-123COMPLEX OF ELONGATING ESCHERICHIA COLI 70S RIBOSOME AND EF4(LEPA)-GMPPNP
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Thermus thermophilus [TaxId: 274] (36)
1FJGL:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH THE ANTIBIOTICS STREPTOMYCIN, SPECTINOMYCIN, AND PAROMOMYCIN
1HNWL:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH TETRACYCLINE
1HNXL:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH PACTAMYCIN
1HNZL:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH HYGROMYCIN B
1HR0L:CRYSTAL STRUCTURE OF INITIATION FACTOR IF1 BOUND TO THE 30S RIBOSOMAL SUBUNIT
1I94L:CRYSTAL STRUCTURES OF THE SMALL RIBOSOMAL SUBUNIT WITH TETRACYCLINE, EDEINE AND IF3
1I95L:CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH EDEINE
1I96L:CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH THE TRANSLATION INITIATION FACTOR IF3 (C-TERMINAL DOMAIN)
1I97L:CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH TETRACYCLINE
1J5EL:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT
1N32L:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT BOUND TO CODON AND NEAR-COGNATE TRANSFER RNA ANTICODON STEM-LOOP MISMATCHED AT THE FIRST CODON POSITION AT THE A SITE WITH PAROMOMYCIN
1N33L:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT BOUND TO CODON AND NEAR-COGNATE TRANSFER RNA ANTICODON STEM-LOOP MISMATCHED AT THE SECOND CODON POSITION AT THE A SITE WITH PAROMOMYCIN
1N34L:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN THE PRESENCE OF CODON AND CRYSTALLOGRAPHICALLY DISORDERED NEAR-COGNATE TRANSFER RNA ANTICODON STEM-LOOP MISMATCHED AT THE FIRST CODON POSITION
1N36L:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN THE PRESENCE OF CRYSTALLOGRAPHICALLY DISORDERED CODON AND NEAR-COGNATE TRANSFER RNA ANTICODON STEM-LOOP MISMATCHED AT THE SECOND CODON POSITION
1XMOL:CRYSTAL STRUCTURE OF MNM5U34T6A37-TRNALYSUUU COMPLEXED WITH AAG-MRNA IN THE DECODING CENTER
1XMQL:CRYSTAL STRUCTURE OF T6A37-ASLLYSUUU AAA-MRNA BOUND TO THE DECODING CENTER
1XNQL:STRUCTURE OF AN INOSINE-ADENINE WOBBLE BASE PAIR COMPLEX IN THE CONTEXT OF THE DECODING CENTER
1XNRL:CRYSTAL STRUCTURE OF AN INOSINE-CYTOSINE WOBBLE BASE PAIR IN THE CONTEXT OF THE DECODING CENTER
2E5LL:5-122A SNAPSHOT OF THE 30S RIBOSOMAL SUBUNIT CAPTURING MRNA VIA THE SHINE- DALGARNO INTERACTION
2F4VL:5-12230S RIBOSOME + DESIGNER ANTIBIOTIC
2HHHL:5-122CRYSTAL STRUCTURE OF KASUGAMYCIN BOUND TO THE 30S RIBOSOMAL SUBUNIT
2UU9L:5-122STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT COMPLEXED WITH A VALINE-ASL WITH CMO5U IN POSITION 34 BOUND TO AN MRNA WITH A GUG-CODON IN THE A-SITE AND PAROMOMYCIN.
2UUAL:5-122STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT COMPLEXED WITH A VALINE-ASL WITH CMO5U IN POSITION 34 BOUND TO AN MRNA WITH A GUC-CODON IN THE A-SITE AND PAROMOMYCIN.
2UUBL:5-122STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT COMPLEXED WITH A VALINE-ASL WITH CMO5U IN POSITION 34 BOUND TO AN MRNA WITH A GUU-CODON IN THE A-SITE AND PAROMOMYCIN.
2UUCL:5-122STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT COMPLEXED WITH A VALINE-ASL WITH CMO5U IN POSITION 34 BOUND TO AN MRNA WITH A GUA-CODON IN THE A-SITE AND PAROMOMYCIN.
2UXCL:5-122CRYSTAL STRUCTURE OF AN EXTENDED TRNA ANTICODON STEM LOOP IN COMPLEX WITH ITS COGNATE MRNA UCGU IN THE CONTEXT OF THE THERMUS THERMOPHILUS 30S SUBUNIT.
(-)
Protein domain: Ribosomal protein S17 (72)
(-)
Bacillus stearothermophilus [TaxId: 1422] (1)
1RIPA:RIBOSOMAL PROTEIN S17: CHARACTERIZATION OF THE THREE-DIMENSIONAL STRUCTURE BY 1H-AND 15N-NMR
(-)
Thermus thermophilus [TaxId: 274] (45)
1FJGQ:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH THE ANTIBIOTICS STREPTOMYCIN, SPECTINOMYCIN, AND PAROMOMYCIN
1HNWQ:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH TETRACYCLINE
1HNXQ:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH PACTAMYCIN
1HNZQ:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH HYGROMYCIN B
1HR0Q:CRYSTAL STRUCTURE OF INITIATION FACTOR IF1 BOUND TO THE 30S RIBOSOMAL SUBUNIT
1I94Q:CRYSTAL STRUCTURES OF THE SMALL RIBOSOMAL SUBUNIT WITH TETRACYCLINE, EDEINE AND IF3
1I95Q:CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH EDEINE
1I96Q:CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH THE TRANSLATION INITIATION FACTOR IF3 (C-TERMINAL DOMAIN)
1I97Q:CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH TETRACYCLINE
1J5EQ:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT
1N32Q:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT BOUND TO CODON AND NEAR-COGNATE TRANSFER RNA ANTICODON STEM-LOOP MISMATCHED AT THE FIRST CODON POSITION AT THE A SITE WITH PAROMOMYCIN
1N33Q:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT BOUND TO CODON AND NEAR-COGNATE TRANSFER RNA ANTICODON STEM-LOOP MISMATCHED AT THE SECOND CODON POSITION AT THE A SITE WITH PAROMOMYCIN
1N34Q:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN THE PRESENCE OF CODON AND CRYSTALLOGRAPHICALLY DISORDERED NEAR-COGNATE TRANSFER RNA ANTICODON STEM-LOOP MISMATCHED AT THE FIRST CODON POSITION
1N36Q:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN THE PRESENCE OF CRYSTALLOGRAPHICALLY DISORDERED CODON AND NEAR-COGNATE TRANSFER RNA ANTICODON STEM-LOOP MISMATCHED AT THE SECOND CODON POSITION
1XMOQ:CRYSTAL STRUCTURE OF MNM5U34T6A37-TRNALYSUUU COMPLEXED WITH AAG-MRNA IN THE DECODING CENTER
1XMQQ:CRYSTAL STRUCTURE OF T6A37-ASLLYSUUU AAA-MRNA BOUND TO THE DECODING CENTER
1XNQQ:STRUCTURE OF AN INOSINE-ADENINE WOBBLE BASE PAIR COMPLEX IN THE CONTEXT OF THE DECODING CENTER
1XNRQ:CRYSTAL STRUCTURE OF AN INOSINE-CYTOSINE WOBBLE BASE PAIR IN THE CONTEXT OF THE DECODING CENTER
2E5LQ:2-105A SNAPSHOT OF THE 30S RIBOSOMAL SUBUNIT CAPTURING MRNA VIA THE SHINE- DALGARNO INTERACTION
2F4VQ:2-10530S RIBOSOME + DESIGNER ANTIBIOTIC
2HHHQ:2-105CRYSTAL STRUCTURE OF KASUGAMYCIN BOUND TO THE 30S RIBOSOMAL SUBUNIT
2UU9Q:2-101STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT COMPLEXED WITH A VALINE-ASL WITH CMO5U IN POSITION 34 BOUND TO AN MRNA WITH A GUG-CODON IN THE A-SITE AND PAROMOMYCIN.
2UUAQ:2-101STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT COMPLEXED WITH A VALINE-ASL WITH CMO5U IN POSITION 34 BOUND TO AN MRNA WITH A GUC-CODON IN THE A-SITE AND PAROMOMYCIN.
2UUBQ:2-101STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT COMPLEXED WITH A VALINE-ASL WITH CMO5U IN POSITION 34 BOUND TO AN MRNA WITH A GUU-CODON IN THE A-SITE AND PAROMOMYCIN.
2UUCQ:2-101STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT COMPLEXED WITH A VALINE-ASL WITH CMO5U IN POSITION 34 BOUND TO AN MRNA WITH A GUA-CODON IN THE A-SITE AND PAROMOMYCIN.
2UXBQ:2-105CRYSTAL STRUCTURE OF AN EXTENDED TRNA ANTICODON STEM LOOP IN COMPLEX WITH ITS COGNATE MRNA GGGU IN THE CONTEXT OF THE THERMUS THERMOPHILUS 30S SUBUNIT.
2UXCQ:2-105CRYSTAL STRUCTURE OF AN EXTENDED TRNA ANTICODON STEM LOOP IN COMPLEX WITH ITS COGNATE MRNA UCGU IN THE CONTEXT OF THE THERMUS THERMOPHILUS 30S SUBUNIT.
2UXDQ:2-105CRYSTAL STRUCTURE OF AN EXTENDED TRNA ANTICODON STEM LOOP IN COMPLEX WITH ITS COGNATE MRNA CGGG IN THE CONTEXT OF THE THERMUS THERMOPHILUS 30S SUBUNIT.
2VQEQ:2-105MODIFIED URIDINES WITH C5-METHYLENE SUBSTITUENTS AT THE FIRST POSITION OF THE TRNA ANTICODON STABILIZE U-G WOBBLE PAIRING DURING DECODING
2VQFQ:2-105MODIFIED URIDINES WITH C5-METHYLENE SUBSTITUENTS AT THE FIRST POSITION OF THE TRNA ANTICODON STABILIZE U-G WOBBLE PAIRING DURING DECODING
(-)
Protein domain: Ribosomal protein S28e (2)
(-)
Methanobacterium thermoautotrophicum [TaxId: 145262] (1)
1NE3A:SOLUTION STRUCTURE OF RIBOSOMAL PROTEIN S28E FROM METHANOBACTERIUM THERMOAUTOTROPHICUM. ONTARIO CENTRE FOR STRUCTURAL PROTEOMICS TARGET MTH0256_1_68; NORTHEAST STRUCTURAL GENOMICS TARGET TT744
(-)
Pyrococcus horikoshii [TaxId: 53953] (1)
1NY4A:SOLUTION STRUCTURE OF THE 30S RIBOSOMAL PROTEIN S28E FROM PYROCOCCUS HORIKOSHII. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET JR19.
(-)
Protein domain: S1 domain of NusA (5)
(-)
Mycobacterium tuberculosis [TaxId: 1773] (3)
1K0RA:108-183; B:108-183CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS NUSA
2ASBA:108-183STRUCTURE OF A MYCOBACTERIUM TUBERCULOSIS NUSA-RNA COMPLEX
2ATWA:108-183; C:108-183STRUCTURE OF A MYCOBACTERIUM TUBERCULOSIS NUSA-RNA COMPLEX
(-)
Thermotoga maritima [TaxId: 2336] (2)
1HH2P:127-198CRYSTAL STRUCTURE OF NUSA FROM THERMOTOGA MARITIMA
1L2FA:127-198CRYSTAL STRUCTURE OF NUSA FROM THERMOTOGA MARITIMA: A STRUCTURE-BASED ROLE OF THE N-TERMINAL DOMAIN
(-)
Protein domain: S1 RNA-binding domain of polyribonucleotide phosphorylase, PNPase (2)
(-)
Escherichia coli [TaxId: 562] (1)
1SROA:S1 RNA BINDING DOMAIN, NMR, 20 STRUCTURES
(-)
Streptomyces antibioticus [TaxId: 1890] (1)
1E3PA:656-717TUNGSTATE DERIVATIVE OF STREPTOMYCES ANTIBIOTICUS PNPASE/ GPSI ENZYME
(-)
Protein domain: S1-domain of exosome complex RNA-binding protein 1, ECR1 (6)
(-)
Aeropyrum pernix [TaxId: 56636] (1)
2Z0SA:60-147CRYSTAL STRUCTURE OF PUTATIVE EXOSOME COMPLEX RNA-BINDING PROTEIN
(-)
Archaeoglobus fulgidus [TaxId: 2234] (1)
2BA0A:53-135; B:53-135; C:53-135ARCHAEAL EXOSOME CORE
(-)
Sulfolobus solfataricus [TaxId: 2287] (4)
2JE6I:66-152STRUCTURE OF A 9-SUBUNIT ARCHAEAL EXOSOME
2JEAI:66-152STRUCTURE OF A 9-SUBUNIT ARCHAEAL EXOSOME BOUND TO RNA
4BA1I:66-152ARCHAEAL EXOSOME (RRP4-RRP41(D182A)-RRP42) BOUND TO INORGANIC PHOSPHATE
4BA2I:66-152ARCHAEAL EXOSOME (RRP4-RRP41(D182A)-RRP42) BOUND TO INORGANIC PHOSPHATE
(-)
Protein domain: S1-domain of exosome component 3 (RRP40) (2)
(-)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (1)
2JA9A:62-151STRUCTURE OF THE N-TERMINAL DELETION OF YEAST EXOSOME COMPONENT RRP40
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
2NN6G:107-194STRUCTURE OF THE HUMAN RNA EXOSOME COMPOSED OF RRP41, RRP45, RRP46, RRP43, MTR3, RRP42, CSL4, RRP4, AND RRP40
(-)
Protein domain: S1-domain of Ribonuclease E (3)
(-)
Escherichia coli [TaxId: 562] (3)
1SLJA:SOLUTION STRUCTURE OF THE S1 DOMAIN OF RNASE E FROM E. COLI
1SMXA:; B:CRYSTAL STRUCTURE OF THE S1 DOMAIN OF RNASE E FROM E. COLI (NATIVE)
1SN8A:; B:CRYSTAL STRUCTURE OF THE S1 DOMAIN OF RNASE E FROM E. COLI (PB DERIVATIVE)
(-)
Protein domain: S1-domain of Ribosomal RNA-processing protein 4, RRP4 (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
2NN6H:73-167STRUCTURE OF THE HUMAN RNA EXOSOME COMPOSED OF RRP41, RRP45, RRP46, RRP43, MTR3, RRP42, CSL4, RRP4, AND RRP40
(-)
Protein domain: S1-domain of RRP5 protein homolog (PDCD11, KIAA0185) (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1WI5A:SOLUTION STRUCTURE OF THE S1 RNA BINDING DOMAIN FROM HUMAN HYPOTHETICAL PROTEIN BAA11502
(-)
Protein domain: Tex S1-domain (3)
(-)
Pseudomonas aeruginosa [TaxId: 287] (3)
2OCEA:637-730CRYSTAL STRUCTURE OF TEX FAMILY PROTEIN PA5201 FROM PSEUDOMONAS AERUGINOSA
3BZCA:637-730CRYSTAL STRUCTURE OF THE TEX PROTEIN FROM PSEUDOMONAS AERUGINOSA, CRYSTAL FORM I
3BZKA:637-730CRYSTAL STRUCTURE OF THE TEX PROTEIN FROM PSEUDOMONAS AERUGINOSA, CRYSTAL FORM 2
(-)
Protein domain: Translation initiation factor-1a, eIF1a (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1D7QA:HUMAN TRANSLATION INITIATION FACTOR EIF1A
(-)
Protein domain: Translational initiation factor 1, IF1 (3)
(-)
Escherichia coli [TaxId: 562] (3)
1AH9A:THE STRUCTURE OF THE TRANSLATIONAL INITIATION FACTOR IF1 FROM ESCHERICHIA COLI, NMR, 19 STRUCTURES
1HR0W:CRYSTAL STRUCTURE OF INITIATION FACTOR IF1 BOUND TO THE 30S RIBOSOMAL SUBUNIT
1ZO1W:1-71IF2, IF1, AND TRNA FITTED TO CRYO-EM DATA OF E. COLI 70S INITIATION COMPLEX
(-)
Protein domain: Viral structural mimic of eIF2alpha (2)
(-)
Myxoma virus, m156r [TaxId: 10273] (1)
1JJGA:SOLUTION STRUCTURE OF MYXOMA VIRUS PROTEIN M156R
(-)
Vaccinia virus [TaxId: 10245] (1)
1LUZA:; B:CRYSTAL STRUCTURE OF THE K3L PROTEIN FROM VACCINIA VIRUS (WISCONSIN STRAIN)
(-)
Protein domain: Y-box protein 1 cold shock domain (YB1-CSD) (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1H95A:SOLUTION STRUCTURE OF THE SINGLE-STRANDED DNA-BINDING COLD SHOCK DOMAIN (CSD) OF HUMAN Y-BOX PROTEIN 1 (YB1) DETERMINED BY NMR (10 LOWEST ENERGY STRUCTURES)