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(-) Description

Title :  CO-CRYSTAL STRUCTURE OF BLASTICIDIN S BOUND TO THE 50S RIBOSOMAL SUBUNIT
 
Authors :  J. L. Hansen, N. Ban, P. Nissen, P. B. Moore, T. A. Steitz
Date :  07 Nov 01  (Deposition) - 22 Jul 03  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.01
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,1,2,3,4
Keywords :  50S Subunit, Blasticidin S, Antibiotic, P-Loop, P-Site, Ribosome (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  J. Hansen, P. B. Moore, T. A. Steitz
Structures Of Five Antibiotics Bound At The Peptidyl Transferase Center Of The Large Ribosomal Subunit
J. Mol. Biol. V. 330 1061 2003
PubMed-ID: 12860128  |  Reference-DOI: 10.1016/S0022-2836(03)00668-5
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - 23S RRNA
    ChainsA
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 2 - 5S RRNA
    ChainsB
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 3 - RIBOSOMAL PROTEIN L2
    ChainsC
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN L2P, HMAL2, HL4
 
Molecule 4 - RIBOSOMAL PROTEIN L3
    ChainsD
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN L3P, HMAL3, HL1
 
Molecule 5 - RIBOSOMAL PROTEIN L4
    ChainsE
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN L4E, HMAL4, HL6
 
Molecule 6 - RIBOSOMAL PROTEIN L5
    ChainsF
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN L5P, HMAL5, HL13
 
Molecule 7 - RIBOSOMAL PROTEIN L6
    ChainsG
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN L6P, HMAL6, HL10
 
Molecule 8 - RIBOSOMAL PROTEIN L7AE
    ChainsH
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN HS6
 
Molecule 9 - RIBOSOMAL PROTEIN L10
    ChainsI
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN P0, HMAL10, L10E
 
Molecule 10 - RIBOSOMAL PROTEIN L10E
    ChainsJ
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 11 - RIBOSOMAL PROTEIN L13
    ChainsK
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN L13P, HMAL13
 
Molecule 12 - RIBOSOMAL PROTEIN L14
    ChainsL
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN L14P, HMAL14, HL27
 
Molecule 13 - RIBOSOMAL PROTEIN L15
    ChainsM
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN L15P, HMAL15, HL9
 
Molecule 14 - RIBOSOMAL PROTEIN L15E
    ChainsN
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 15 - RIBOSOMAL PROTEIN L18
    ChainsO
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN L18P, HMAL18, HL12
 
Molecule 16 - RIBOSOMAL PROTEIN L18E
    ChainsP
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN L18E, HL29, L19
 
Molecule 17 - RIBOSOMAL PROTEIN L19E
    ChainsQ
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN L19E, HMAL19, HL24
 
Molecule 18 - RIBOSOMAL PROTEIN L21E
    ChainsR
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN L21E, HL31
 
Molecule 19 - RIBOSOMAL PROTEIN L22
    ChainsS
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN L22P, HMAL22, HL23
 
Molecule 20 - RIBOSOMAL PROTEIN L23
    ChainsT
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN L23P, HMAL23, HL25, L21
 
Molecule 21 - RIBOSOMAL PROTEIN L24
    ChainsU
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN L24P, HMAL24, HL16, HL15
 
Molecule 22 - RIBOSOMAL PROTEIN L24E
    ChainsV
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN L24E, HL21/HL22
 
Molecule 23 - RIBOSOMAL PROTEIN L29
    ChainsW
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN L29P, HMAL29, HL33
 
Molecule 24 - RIBOSOMAL PROTEIN L30
    ChainsX
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN L30P, HMAL30, HL20, HL16
 
Molecule 25 - RIBOSOMAL PROTEIN L31E
    ChainsY
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN L31E, L34, HL30
 
Molecule 26 - RIBOSOMAL PROTEIN L32E
    ChainsZ
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN L32E, HL5
 
Molecule 27 - RIBOSOMAL PROTEIN L37AE
    Chains1
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 28 - RIBOSOMAL PROTEIN L37E
    Chains2
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN L37E, L35E
 
Molecule 29 - RIBOSOMAL PROTEIN L39E
    Chains3
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEINS L39E, HL39E, HL46E
 
Molecule 30 - RIBOSOMAL PROTEIN L44E
    Chains4
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN L44E, LA, HLA

 Structural Features

(-) Chains, Units

  123456789101112131415161718192021222324252627282930
Asymmetric/Biological Unit ABCDEFGHIJKLMNOPQRSTUVWXYZ1234

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (6, 235)

Asymmetric/Biological Unit (6, 235)
No.NameCountTypeFull Name
1BLS2Ligand/IonBLASTICIDIN S
2CD5Ligand/IonCADMIUM ION
3CL22Ligand/IonCHLORIDE ION
4K3Ligand/IonPOTASSIUM ION
5MG117Ligand/IonMAGNESIUM ION
6NA86Ligand/IonSODIUM ION

(-) Sites  (235, 235)

Asymmetric Unit (235, 235)
No.NameEvidenceResiduesDescription
001AC1SOFTWAREC A:2104 , C A:2105 , G A:2284 , G A:2285 , A A:2474 , A A:2635 , C A:2636 , A A:2637 , BLS A:9002BINDING SITE FOR RESIDUE BLS A 9001
002AC2SOFTWAREA A:2007 , G A:2285 , G A:2286 , U A:2628 , C A:2636 , A A:2637 , BLS A:9001BINDING SITE FOR RESIDUE BLS A 9002
003AC3SOFTWAREG A:2482 , A A:2483 , A A:2532 , C A:2533 , C A:2534 , HOH A:3619 , HOH A:7777 , HOH A:9178BINDING SITE FOR RESIDUE MG A 8001
004AC4SOFTWAREG A:627 , A A:2483 , C A:2534 , HOH A:4325 , HOH A:7756 , HOH A:7757BINDING SITE FOR RESIDUE MG A 8002
005AC5SOFTWAREA A:876 , G A:877 , A A:2624 , HOH A:3671 , HOH A:9024 , HOH C:8536BINDING SITE FOR RESIDUE MG A 8003
006AC6SOFTWAREG A:456 , A A:459 , HOH A:3787 , HOH A:7762 , HOH A:9050 , HOH A:9774BINDING SITE FOR RESIDUE MG A 8004
007AC7SOFTWAREA A:1836 , U A:1838 , A A:1839 , HOH A:3615 , HOH A:7778 , HOH A:7779BINDING SITE FOR RESIDUE MG A 8005
008AC8SOFTWAREU A:821 , C A:822 , G A:854 , HOH A:3621 , HOH A:3758 , HOH A:9806BINDING SITE FOR RESIDUE MG A 8006
009AC9SOFTWAREU A:832 , A A:1839 , A A:1840 , HOH A:3356 , HOH A:7767 , HOH A:9009BINDING SITE FOR RESIDUE MG A 8007
010AD1SOFTWARELYS 4:24 , ASP 4:66 , LEU 4:67BINDING SITE FOR RESIDUE CL 4 8504
011BC1SOFTWAREU A:919 , C A:2464 , A A:2465 , HOH A:3634 , HOH A:7771 , HOH A:7856BINDING SITE FOR RESIDUE MG A 8008
012BC2SOFTWAREG A:2093 , U A:2610 , G A:2611 , A A:2612 , HOH A:3745 , HOH A:7432 , HOH A:7772 , HOH A:7773 , NA A:8358BINDING SITE FOR RESIDUE MG A 8009
013BC3SOFTWAREG A:836 , U A:2615 , HOH A:3843 , HOH A:9274 , HOH A:9364 , GLN D:230BINDING SITE FOR RESIDUE MG A 8010
014BC4SOFTWAREG A:824 , G A:854 , HOH A:3964 , HOH A:4292 , HOH A:4423 , HOH A:4530BINDING SITE FOR RESIDUE MG A 8011
015BC5SOFTWAREG A:28 , HOH A:3225 , HOH A:3653 , HOH A:7857 , HOH A:9042 , HOH A:9637BINDING SITE FOR RESIDUE MG A 8012
016BC6SOFTWAREG A:877 , G A:2623 , HOH A:3647 , HOH A:3660 , HOH A:7786 , HOH A:9023BINDING SITE FOR RESIDUE MG A 8013
017BC7SOFTWAREG A:2102 , C A:2536 , G A:2537 , HOH A:3665 , HOH A:4166 , HOH A:7754 , HOH A:9036BINDING SITE FOR RESIDUE MG A 8014
018BC8SOFTWAREA A:844 , A A:1689 , HOH A:3625 , HOH A:7788 , HOH A:9007 , HOH A:9027BINDING SITE FOR RESIDUE MG A 8015
019BC9SOFTWAREA A:1504 , A A:1678 , C A:1679 , HOH A:3751 , HOH A:7780 , HOH A:7781BINDING SITE FOR RESIDUE MG A 8016
020CC1SOFTWAREG A:456 , HOH A:3626 , HOH A:3948 , HOH A:7395 , HOH A:7763 , HOH A:9416 , GLY E:86BINDING SITE FOR RESIDUE MG A 8017
021CC2SOFTWAREA A:1291 , G A:1292 , HOH A:3218 , HOH A:3617 , HOH A:7469 , HOH A:7858BINDING SITE FOR RESIDUE MG A 8018
022CC3SOFTWAREA A:2011 , HOH A:4153 , HOH A:7237 , HOH A:7782 , HOH A:7783 , HOH A:7784BINDING SITE FOR RESIDUE MG A 8019
023CC4SOFTWAREC A:1830 , HOH A:7766 , HOH A:7785 , HOH A:9125 , HOH A:9128 , HOH A:9199BINDING SITE FOR RESIDUE MG A 8020
024CC5SOFTWAREG A:2304 , HOH A:3643 , HOH A:3644 , HOH A:7769 , HOH A:7770 , HOH A:9959BINDING SITE FOR RESIDUE MG A 8021
025CC6SOFTWAREG A:2097 , U A:2539 , G A:2540 , HOH A:3874 , HOH A:7774 , HOH A:9113 , HOH A:9458BINDING SITE FOR RESIDUE MG A 8022
026CC7SOFTWAREG A:2616 , G A:2617 , G A:2618 , HOH A:3632 , HOH A:3824 , HOH A:7790 , HOH A:7791BINDING SITE FOR RESIDUE MG A 8023
027CC8SOFTWAREA A:1381 , HOH A:5127 , HOH A:7859 , HOH A:9933 , HOH Y:7830BINDING SITE FOR RESIDUE MG A 8024
028CC9SOFTWAREU A:1120 , G A:1121 , HOH A:4171 , HOH A:7792 , HOH A:7793 , HOH A:7860BINDING SITE FOR RESIDUE MG A 8025
029DC1SOFTWAREC A:2608 , G A:2609 , U A:2610 , HOH A:7794 , HOH A:7795 , HOH A:9394BINDING SITE FOR RESIDUE MG A 8026
030DC2SOFTWAREC A:240 , G A:269 , HOH A:3877 , HOH A:4018 , HOH A:4158 , HOH N:8650BINDING SITE FOR RESIDUE MG A 8027
031DC3SOFTWAREA A:1448 , U A:1677 , HOH A:3683 , HOH A:3704 , HOH A:3716 , HOH A:7798 , HOH A:9573BINDING SITE FOR RESIDUE MG A 8028
032DC4SOFTWAREA A:1502 , U A:1503 , A A:1504 , C A:1679 , HOH A:7799 , HOH A:7800 , HOH A:7801 , HOH A:7802BINDING SITE FOR RESIDUE MG A 8029
033DC5SOFTWAREU A:1748 , U A:1749 , HOH A:3645 , HOH A:7764 , HOH A:7765 , HOH A:7775BINDING SITE FOR RESIDUE MG A 8030
034DC6SOFTWAREU A:777 , C A:778 , HOH A:3274 , HOH A:7804 , HOH A:7805 , HOH A:7806 , NA A:8325BINDING SITE FOR RESIDUE MG A 8031
035DC7SOFTWAREU A:2115 , G A:2272 , HOH A:3731 , HOH A:3793 , HOH A:4192 , HOH A:9987 , HOH C:8632BINDING SITE FOR RESIDUE MG A 8032
036DC8SOFTWAREA A:1747 , U A:1748 , U A:1749 , G A:2585 , HOH A:3820 , HOH A:9676BINDING SITE FOR RESIDUE MG A 8033
037DC9SOFTWAREA A:2302 , A A:2303 , HOH A:3648 , HOH A:3774 , HOH A:4866 , HOH A:7807BINDING SITE FOR RESIDUE MG A 8034
038EC1SOFTWAREG A:1484 , HOH A:3721 , HOH A:7808 , HOH A:7809 , HOH A:7862 , HOH A:7863BINDING SITE FOR RESIDUE MG A 8035
039EC2SOFTWAREG A:956 , HOH A:3675 , HOH A:7810 , HOH A:7811 , HOH A:7812 , HOH A:9369BINDING SITE FOR RESIDUE MG A 8036
040EC3SOFTWAREA A:2553 , A A:2576 , HOH A:3131 , HOH A:3208 , HOH A:3654 , HOH A:7864 , HOH A:9081BINDING SITE FOR RESIDUE MG A 8037
041EC4SOFTWAREHOH A:3630 , HOH A:3655 , HOH A:3676 , HOH A:3678 , HOH A:7814 , HOH A:9284BINDING SITE FOR RESIDUE MG A 8038
042EC5SOFTWAREU A:115 , HOH A:3970 , HOH A:5106 , HOH A:7815 , HOH A:7816 , HOH A:9906BINDING SITE FOR RESIDUE MG A 8039
043EC6SOFTWAREU A:392 , HOH A:3794 , HOH A:4643 , HOH A:7866 , HOH A:7867 , HOH A:9689BINDING SITE FOR RESIDUE MG A 8040
044EC7SOFTWAREG A:196 , A A:227 , C A:228 , HOH A:4112 , HOH A:4203 , HOH A:5382BINDING SITE FOR RESIDUE MG A 8041
045EC8SOFTWAREU A:1309 , U A:1346 , HOH A:3663 , HOH A:4419 , HOH A:7817 , HOH A:9438BINDING SITE FOR RESIDUE MG A 8042
046EC9SOFTWAREG A:816 , G A:817 , HOH A:7421 , HOH A:7868 , MG A:8106 , HOH A:9810BINDING SITE FOR RESIDUE MG A 8043
047FC1SOFTWAREC A:2048 , C A:2088 , A A:2089 , HOH A:3293 , GLY S:65 , HOH S:8591BINDING SITE FOR RESIDUE MG A 8044
048FC2SOFTWAREG A:1979 , HOH A:7818 , HOH A:7869 , HOH A:7870 , HOH A:7871BINDING SITE FOR RESIDUE MG A 8045
049FC3SOFTWAREG A:1794 , HOH A:7301 , HOH A:7872 , HOH A:7873BINDING SITE FOR RESIDUE MG A 8046
050FC4SOFTWAREA A:1098 , HOH A:3125 , HOH A:6272 , HOH A:7887BINDING SITE FOR RESIDUE MG A 8047
051FC5SOFTWAREA A:2746 , U A:2749 , G A:2750 , HOH A:5874 , HOH A:6263 , HOH A:7874 , HOH A:7910BINDING SITE FOR RESIDUE MG A 8048
052FC6SOFTWAREG A:2421 , U A:2422 , C A:2423 , HOH A:7875BINDING SITE FOR RESIDUE MG A 8049
053FC7SOFTWAREC A:2248 , HOH A:7323BINDING SITE FOR RESIDUE MG A 8050
054FC8SOFTWAREG A:641 , HOH A:4107 , HOH A:7819 , HOH A:7820BINDING SITE FOR RESIDUE MG A 8051
055FC9SOFTWAREU A:1125 , C A:1129 , HOH A:3628 , HOH A:7889 , HOH A:9589 , G B:3092 , HOH B:8418BINDING SITE FOR RESIDUE MG A 8052
056GC1SOFTWAREG A:471 , HOH A:3038 , HOH A:4398 , HOH A:5615 , HOH A:9204 , HOH A:9243BINDING SITE FOR RESIDUE MG A 8053
057GC2SOFTWAREC A:162 , U A:2276 , HOH A:7768 , HOH A:7821 , HOH A:7822 , HOH A:9434BINDING SITE FOR RESIDUE MG A 8054
058GC3SOFTWAREHOH A:3762 , HOH A:3798 , HOH A:7719 , HOH A:7890 , HOH D:8660BINDING SITE FOR RESIDUE MG A 8055
059GC4SOFTWAREA A:2757 , HOH A:3673 , HOH A:3979 , HOH A:7840 , HOH A:9978 , ASN D:335BINDING SITE FOR RESIDUE MG A 8056
060GC5SOFTWAREU A:1883 , U A:2012 , G A:2013 , HOH A:5013 , GLN C:207BINDING SITE FOR RESIDUE MG A 8057
061GC6SOFTWAREG A:2013 , HOH A:3768 , HOH A:7823 , HOH A:7824 , HOH C:8633 , HOH C:8635BINDING SITE FOR RESIDUE MG A 8058
062GC7SOFTWAREG A:2618 , HOH A:3727 , HOH A:4055 , HOH A:7776 , MG A:8085 , HOH A:9041 , HOH A:9045BINDING SITE FOR RESIDUE MG A 8059
063GC8SOFTWAREG A:175 , U A:224 , G A:393 , HOH A:7825 , HOH A:7826 , HOH A:7827 , HOH A:9172BINDING SITE FOR RESIDUE MG A 8060
064GC9SOFTWAREA A:1369 , U A:2650 , HOH A:7828 , HOH A:7829 , HOH A:7830 , HOH A:9816BINDING SITE FOR RESIDUE MG A 8061
065HC1SOFTWAREG A:1489 , G A:1491 , HOH A:3637 , HOH A:3962 , HOH A:6173 , HOH A:9397BINDING SITE FOR RESIDUE MG A 8062
066HC2SOFTWAREHOH A:4183 , HOH A:7005 , HOH A:7439 , HOH A:7761 , HOH A:7839 , HOH A:7891BINDING SITE FOR RESIDUE MG A 8063
067HC3SOFTWAREU A:2277 , U A:2278 , G A:2471 , HOH A:3765 , HOH A:9588BINDING SITE FOR RESIDUE MG A 8064
068HC4SOFTWAREC A:1872 , G A:1873 , HOH A:4351 , ASP C:26BINDING SITE FOR RESIDUE MG A 8066
069HC5SOFTWAREA A:1845 , U A:1846 , G A:1884 , HOH A:7832 , ASN C:188BINDING SITE FOR RESIDUE MG A 8067
070HC6SOFTWAREA A:2568 , A A:2569 , HOH A:3756 , HOH A:4818 , HOH A:6223 , HOH A:7892 , HOH G:920BINDING SITE FOR RESIDUE MG A 8068
071HC7SOFTWAREA A:166 , G A:219 , HOH A:3821 , HOH A:4957 , HOH A:5591 , HOH A:9126BINDING SITE FOR RESIDUE MG A 8070
072HC8SOFTWAREHOH A:4116 , HOH A:6051 , HOH A:7425 , HOH A:7561 , HOH A:7837 , HOH A:7838BINDING SITE FOR RESIDUE MG A 8071
073HC9SOFTWAREU A:954 , HOH A:3230 , HOH A:4000 , HOH A:7420 , HOH A:7836 , HOH A:7893BINDING SITE FOR RESIDUE MG A 8072
074IC1SOFTWAREA A:1286 , A A:1287 , HOH A:7833 , HOH A:7834 , HOH A:7894 , HOH X:7874BINDING SITE FOR RESIDUE MG A 8074
075IC2SOFTWAREA A:907 , A A:908 , HOH A:3642 , HOH A:3920 , HOH A:4937 , HOH A:7835BINDING SITE FOR RESIDUE MG A 8075
076IC3SOFTWAREHOH 3:7875 , HOH A:6849 , HOH A:7841 , HOH A:7842 , HOH A:7895 , HOH A:7896BINDING SITE FOR RESIDUE MG A 8076
077IC4SOFTWAREC A:880 , U A:883 , HOH A:3627 , HOH A:7843 , HOH A:7844 , HOH A:9242BINDING SITE FOR RESIDUE MG A 8077
078IC5SOFTWAREA A:165 , A A:167 , C A:168 , HOH A:3614 , HOH A:3620 , HOH A:3633BINDING SITE FOR RESIDUE MG A 8079
079IC6SOFTWAREA A:1684 , U A:1724 , HOH A:4208 , HOH A:4492 , HOH A:7845 , HOH A:7898BINDING SITE FOR RESIDUE MG A 8080
080IC7SOFTWAREC A:1420 , C A:1421 , G A:1438 , HOH A:4102 , HOH A:9610BINDING SITE FOR RESIDUE MG A 8081
081IC8SOFTWAREC A:1436 , A A:1437 , HOH A:5162 , HOH A:5248 , HOH A:7906 , HOH Q:212BINDING SITE FOR RESIDUE MG A 8082
082IC9SOFTWAREA A:1754 , HOH A:3712 , HOH A:4154 , HOH A:6358 , HOH A:7846 , HOH A:7899BINDING SITE FOR RESIDUE MG A 8083
083JC1SOFTWAREA A:1742 , HOH A:3639 , HOH A:7847 , HOH A:9251 , HOH A:9375 , HOH A:9748BINDING SITE FOR RESIDUE MG A 8084
084JC2SOFTWAREG A:2617 , G A:2618 , HOH A:3792 , HOH A:4359 , HOH A:4485 , MG A:8059 , HOH A:9041 , HOH A:9601BINDING SITE FOR RESIDUE MG A 8085
085JC3SOFTWAREA A:532 , U A:533 , HOH A:3738 , HOH A:3980 , HOH A:7848 , HOH A:7849BINDING SITE FOR RESIDUE MG A 8086
086JC4SOFTWAREA A:682 , G A:683 , HOH A:3682 , HOH A:7907BINDING SITE FOR RESIDUE MG A 8087
087JC5SOFTWAREG A:2540 , G A:2611 , HOH A:3042 , HOH A:4294 , NA A:8339 , HOH A:9067 , HOH A:9298BINDING SITE FOR RESIDUE MG A 8088
088JC6SOFTWAREC A:515 , A A:516 , U A:517 , G A:518 , HOH A:7850 , HOH A:7900 , HOH A:7901BINDING SITE FOR RESIDUE MG A 8089
089JC7SOFTWAREA A:2103 , U A:2478 , HOH A:3618 , HOH A:3801BINDING SITE FOR RESIDUE MG A 8090
090JC8SOFTWAREG A:918 , HOH A:3321 , HOH A:6482 , HOH A:7851 , HOH A:9095 , HOH A:9544BINDING SITE FOR RESIDUE MG A 8091
091JC9SOFTWAREC A:1844 , HOH A:3650 , HOH A:3666 , HOH A:7902BINDING SITE FOR RESIDUE MG A 8092
092KC1SOFTWAREA A:1070 , G A:1071 , HOH A:3656 , HOH A:3687 , HOH A:3728 , HOH A:9682BINDING SITE FOR RESIDUE MG A 8093
093KC2SOFTWAREU A:1096 , C A:1257 , HOH A:7852 , HOH A:7903BINDING SITE FOR RESIDUE MG A 8094
094KC3SOFTWAREG A:1848 , G A:1849 , HOH A:3669 , HOH A:3705 , HOH A:3838 , HOH A:3869 , MG A:8116BINDING SITE FOR RESIDUE MG A 8096
095KC4SOFTWAREG A:863 , U A:864 , HOH A:3337 , HOH A:3677 , HOH A:3681 , HOH A:5555BINDING SITE FOR RESIDUE MG A 8097
096KC5SOFTWAREA A:907 , HOH A:3369 , HOH A:3689 , HOH A:3753 , HOH A:9939 , HOH Z:8567BINDING SITE FOR RESIDUE MG A 8098
097KC6SOFTWAREA A:2612 , HOH A:3013 , HOH A:3672 , HOH A:3684BINDING SITE FOR RESIDUE MG A 8099
098KC7SOFTWAREG A:2080 , HOH A:3771 , HOH A:4253 , HOH A:5509 , HOH A:7853 , HOH A:7854BINDING SITE FOR RESIDUE MG A 8100
099KC8SOFTWAREU A:2107 , C A:2281 , U A:2282 , HOH A:3752 , HOH A:4623BINDING SITE FOR RESIDUE MG A 8101
100KC9SOFTWAREHOH 4:8523 , A A:2434 , U A:2458 , HOH A:7911 , HOH A:9254BINDING SITE FOR RESIDUE MG A 8102
101LC1SOFTWAREG A:2578 , G A:2579 , HOH A:7904BINDING SITE FOR RESIDUE MG A 8103
102LC2SOFTWAREC A:2104 , C A:2105 , HOH A:7758 , HOH A:7759BINDING SITE FOR RESIDUE MG A 8104
103LC3SOFTWAREG A:817 , HOH A:3603 , HOH A:7416 , HOH A:7421 , HOH A:7868 , MG A:8043 , HOH Q:185BINDING SITE FOR RESIDUE MG A 8106
104LC4SOFTWAREA A:1106 , A A:1107 , HOH A:7877 , HOH A:7878 , HOH A:7879 , HOH A:7880BINDING SITE FOR RESIDUE MG A 8107
105LC5SOFTWAREHOH A:6096 , HOH A:7497 , HOH A:7882 , HOH A:7883 , HOH A:7884BINDING SITE FOR RESIDUE MG A 8108
106LC6SOFTWAREU A:903 , A A:1357 , HOH A:3930 , HOH A:5406 , HOH A:6029 , HOH A:9507BINDING SITE FOR RESIDUE MG A 8110
107LC7SOFTWAREG A:2609 , HOH A:3297 , HOH A:3702 , HOH A:3726 , HOH A:5601 , HOH A:5750BINDING SITE FOR RESIDUE MG A 8111
108LC8SOFTWAREA A:187 , HOH A:3733 , HOH A:3772 , HOH A:9131 , HOH A:9333 , HOH A:9566 , VAL N:189BINDING SITE FOR RESIDUE MG A 8112
109LC9SOFTWAREA A:2112 , HOH A:3757 , HOH A:3928 , HOH A:6129 , HOH A:6400 , HOH A:9588BINDING SITE FOR RESIDUE MG A 8113
110MC1SOFTWAREHOH 4:8537 , A A:2430 , HOH A:3674 , HOH A:3969 , HOH A:9351 , HOH A:9452BINDING SITE FOR RESIDUE MG A 8114
111MC2SOFTWAREHOH A:4287 , HOH A:4303 , HOH A:6410 , HOH A:6600 , HOH A:6732 , HOH C:8555 , HOH C:8636BINDING SITE FOR RESIDUE MG A 8115
112MC3SOFTWAREG A:1849 , U A:1850 , HOH A:3669 , HOH A:3869 , HOH A:6732 , MG A:8096 , HOH C:8555BINDING SITE FOR RESIDUE MG A 8116
113MC4SOFTWAREA A:1840 , C A:1841 , A A:2022 , HOH A:4636 , HOH A:6560 , HOH A:9225BINDING SITE FOR RESIDUE MG A 8117
114MC5SOFTWAREC A:2104 , A A:2485 , A A:2486BINDING SITE FOR RESIDUE K A 8201
115MC6SOFTWAREG A:2102 , G A:2482 , C A:2536BINDING SITE FOR RESIDUE K A 8202
116MC7SOFTWAREC A:162 , U A:163 , U A:172 , HOH A:4925 , HOH A:7822 , HOH A:9017 , HOH A:9114 , ARG N:82BINDING SITE FOR RESIDUE K A 8203
117MC8SOFTWAREC A:1069 , G A:1072 , G A:1087 , HOH A:3166 , HOH A:3198 , HOH A:4970BINDING SITE FOR RESIDUE NA A 8301
118MC9SOFTWAREG A:1119 , U A:1120 , G A:1121 , HOH A:5685BINDING SITE FOR RESIDUE NA A 8302
119NC1SOFTWAREA A:643 , G A:644 , U A:904 , G A:1354 , ARG M:8BINDING SITE FOR RESIDUE NA A 8303
120NC2SOFTWAREA A:630 , A A:631 , HOH A:4093 , HOH A:4699 , HOH A:5787BINDING SITE FOR RESIDUE NA A 8305
121NC3SOFTWAREG A:2092 , G A:2093 , G A:2094 , A A:2649 , HOH A:9130BINDING SITE FOR RESIDUE NA A 8306
122NC4SOFTWAREC A:40 , G A:41 , A A:442 , C A:443BINDING SITE FOR RESIDUE NA A 8307
123NC5SOFTWAREC A:1394 , U A:1432 , G A:1433 , U A:1724 , HOH A:3409BINDING SITE FOR RESIDUE NA A 8308
124NC6SOFTWAREA A:2577 , G A:2578 , G A:2579 , HOH A:4505BINDING SITE FOR RESIDUE NA A 8310
125NC7SOFTWAREG A:2524 , G A:2525 , HOH A:3577 , HOH A:4653 , HOH A:9185BINDING SITE FOR RESIDUE NA A 8311
126NC8SOFTWAREG A:2399 , HOH A:3839 , HOH A:5124 , HOH A:9948BINDING SITE FOR RESIDUE NA A 8313
127NC9SOFTWAREU A:2541 , U A:2607 , C A:2608 , HOH A:3126 , HOH A:9334 , TRP D:242BINDING SITE FOR RESIDUE NA A 8314
128OC1SOFTWAREA A:165 , A A:166 , A A:167 , HOH A:9685BINDING SITE FOR RESIDUE NA A 8315
129OC2SOFTWAREC A:896 , A A:897 , HOH A:6317 , HOH A:9033BINDING SITE FOR RESIDUE NA A 8316
130OC3SOFTWARETRP 3:42 , ASN 3:45 , HOH 3:4135 , G A:1416 , G A:1417 , HOH A:9280BINDING SITE FOR RESIDUE NA A 8317
131OC4SOFTWAREG A:2543 , G A:2544 , HOH A:3462 , HOH A:3934 , NA A:8320BINDING SITE FOR RESIDUE NA A 8318
132OC5SOFTWAREA A:2465 , G A:2466 , HOH A:4262 , HOH A:6044 , HOH A:9064 , ASP M:36BINDING SITE FOR RESIDUE NA A 8319
133OC6SOFTWAREG A:2543 , G A:2544 , G A:2611 , U A:2615 , NA A:8318 , HOH A:9061 , HOH A:9090 , HOH A:9739BINDING SITE FOR RESIDUE NA A 8320
134OC7SOFTWAREG A:836 , U A:837 , A A:1736 , A A:1737 , ARG D:229BINDING SITE FOR RESIDUE NA A 8321
135OC8SOFTWAREG A:885 , A A:2112 , G A:2113 , C A:2475 , C A:2476 , HOH A:4479BINDING SITE FOR RESIDUE NA A 8323
136OC9SOFTWAREA A:45 , C A:130 , U A:146 , G A:147 , HOH A:4133 , HOH A:9492BINDING SITE FOR RESIDUE NA A 8324
137PC1SOFTWAREA A:776 , U A:777 , U A:779 , HOH A:3274 , HOH A:7668 , MG A:8031 , HOH A:9625BINDING SITE FOR RESIDUE NA A 8325
138PC2SOFTWAREG A:1971 , G A:2009 , A A:2010 , U A:2012BINDING SITE FOR RESIDUE NA A 8326
139PC3SOFTWAREU A:821 , C A:853 , G A:854 , U A:1831 , G A:1832 , HOH A:3202 , HOH A:9040 , HOH A:9728BINDING SITE FOR RESIDUE NA A 8327
140PC4SOFTWAREG A:56 , A A:59 , A A:60 , G A:61 , HOH A:5220 , HOH A:6477BINDING SITE FOR RESIDUE NA A 8328
141PC5SOFTWAREG A:66 , U A:107 , U A:108 , HOH A:6578BINDING SITE FOR RESIDUE NA A 8329
142PC6SOFTWAREC A:141 , G A:142 , HOH A:9236BINDING SITE FOR RESIDUE NA A 8330
143PC7SOFTWAREU A:170 , C A:171 , C A:218 , G A:221 , HOH A:9303 , HOH A:9548BINDING SITE FOR RESIDUE NA A 8331
144PC8SOFTWAREG A:386 , G A:387 , G A:388 , C A:401 , U A:402 , HOH A:7073BINDING SITE FOR RESIDUE NA A 8332
145PC9SOFTWAREC A:1894 , U A:1897 , G A:1898 , U A:1939BINDING SITE FOR RESIDUE NA A 8333
146QC1SOFTWAREC A:1894 , A A:1895 , G A:1896 , U A:1897 , HOH A:5254BINDING SITE FOR RESIDUE NA A 8334
147QC2SOFTWAREG A:622 , U A:623 , A A:628 , A A:630 , HOH A:9869BINDING SITE FOR RESIDUE NA A 8335
148QC3SOFTWAREG A:1706 , G A:1707 , HOH A:5344 , HOH A:7351 , HOH A:7695 , HOH A:9920BINDING SITE FOR RESIDUE NA A 8336
149QC4SOFTWAREG A:2540 , G A:2611 , G A:2616 , U A:2645 , HOH A:3026 , MG A:8088BINDING SITE FOR RESIDUE NA A 8339
150QC5SOFTWAREU A:1740 , U A:1741 , G A:2033 , HOH A:6820BINDING SITE FOR RESIDUE NA A 8340
151QC6SOFTWAREG A:681 , A A:682 , G A:683BINDING SITE FOR RESIDUE NA A 8341
152QC7SOFTWAREG A:891 , G A:892 , C A:893 , HOH A:5626 , HOH A:6269BINDING SITE FOR RESIDUE NA A 8342
153QC8SOFTWAREU A:2663 , A A:2811 , A A:2812 , A A:2816 , G A:2817 , HOH A:9224BINDING SITE FOR RESIDUE NA A 8344
154QC9SOFTWAREA A:914 , C A:915 , C A:1043 , C A:1044 , G A:1045BINDING SITE FOR RESIDUE NA A 8349
155RC1SOFTWAREU A:623 , U A:624 , G A:901 , HOH A:6959 , HOH A:7755BINDING SITE FOR RESIDUE NA A 8350
156RC2SOFTWAREA A:955 , HOH A:6603 , C B:3081 , U B:3082BINDING SITE FOR RESIDUE NA A 8352
157RC3SOFTWAREA A:1040 , G A:1295 , A A:1296 , HOH A:4875 , GLY M:14 , HOH M:8515BINDING SITE FOR RESIDUE NA A 8353
158RC4SOFTWAREU A:768 , C A:769 , G A:2111 , A A:2112 , HOH A:4815BINDING SITE FOR RESIDUE NA A 8354
159RC5SOFTWAREG A:1119 , C A:1243 , HOH A:4808 , THR K:47BINDING SITE FOR RESIDUE NA A 8355
160RC6SOFTWAREC A:920 , U A:2278 , G A:2279 , A A:2463BINDING SITE FOR RESIDUE NA A 8356
161RC7SOFTWAREG A:941 , U A:942 , G A:1024 , HOH A:6276BINDING SITE FOR RESIDUE NA A 8357
162RC8SOFTWAREG A:2094 , G A:2611 , HOH A:3874 , HOH A:7432 , HOH A:7789 , MG A:8009 , HOH A:9336 , HOH A:9485 , TRP D:242BINDING SITE FOR RESIDUE NA A 8358
163RC9SOFTWAREG A:898 , A A:922 , A A:923 , G A:924 , U A:2109BINDING SITE FOR RESIDUE NA A 8359
164SC1SOFTWAREA A:453 , U A:454 , C A:478 , G A:479 , HOH A:5955BINDING SITE FOR RESIDUE NA A 8360
165SC2SOFTWAREU A:837 , HOH A:4905 , HOH A:7340 , GLN D:230BINDING SITE FOR RESIDUE NA A 8361
166SC3SOFTWAREA A:167 , C A:168 , G A:2110 , G A:2111 , U A:2277BINDING SITE FOR RESIDUE NA A 8362
167SC4SOFTWAREU A:1359 , C A:1360 , GLY E:66BINDING SITE FOR RESIDUE NA A 8363
168SC5SOFTWAREG A:636 , U A:2057 , G A:2058 , HOH A:9593 , HOH A:9813BINDING SITE FOR RESIDUE NA A 8364
169SC6SOFTWAREU A:391 , U A:392 , U A:398 , C A:399 , LYS N:193 , ALA N:194BINDING SITE FOR RESIDUE NA A 8365
170SC7SOFTWAREG A:544 , G A:545 , G A:610 , U A:611 , HOH A:3825 , HOH A:3884BINDING SITE FOR RESIDUE NA A 8366
171SC8SOFTWAREG A:464 , G A:475 , HOH A:4478 , HOH A:4603 , HOH A:9826 , ARG E:55BINDING SITE FOR RESIDUE NA A 8367
172SC9SOFTWAREG A:798 , C A:799 , G A:814 , U A:815 , HOH A:3888BINDING SITE FOR RESIDUE NA A 8368
173TC1SOFTWAREHOH 4:8547 , U A:391 , U A:392 , A A:395 , U A:398 , HOH A:6573BINDING SITE FOR RESIDUE NA A 8369
174TC2SOFTWAREG A:1832 , A A:2022 , HOH A:4106 , HOH A:9107BINDING SITE FOR RESIDUE NA A 8370
175TC3SOFTWAREG A:2491 , U A:2492 , G A:2529BINDING SITE FOR RESIDUE NA A 8371
176TC4SOFTWAREU A:919 , G A:921 , G A:924 , HOH A:9276BINDING SITE FOR RESIDUE NA A 8372
177TC5SOFTWAREG A:1576 , U A:1577 , G A:1618 , G A:1619 , HOH A:3685 , HOH A:7305BINDING SITE FOR RESIDUE NA A 8373
178TC6SOFTWAREC A:195 , G A:196 , A A:415 , G A:416BINDING SITE FOR RESIDUE NA A 8374
179TC7SOFTWAREG A:868 , G A:869 , A A:886 , G A:887 , HOH A:3905BINDING SITE FOR RESIDUE NA A 8375
180TC8SOFTWAREA A:632 , C A:633 , A A:2538 , U A:2539 , HOH A:3652 , HOH A:4855BINDING SITE FOR RESIDUE NA A 8376
181TC9SOFTWAREG A:911 , U A:1293 , A A:1294 , G A:1295 , HOH A:6345BINDING SITE FOR RESIDUE NA A 8377
182UC1SOFTWAREC A:762 , G A:902 , U A:903 , HOH A:3206 , HIS M:18 , HOH M:8534 , HOH M:8555BINDING SITE FOR RESIDUE NA A 8378
183UC2SOFTWAREU A:831 , U A:832 , G A:833 , HOH A:3719 , HOH A:4427BINDING SITE FOR RESIDUE NA A 8379
184UC3SOFTWAREG A:2585 , U A:2586 , U A:2587 , G A:2592 , C A:2593 , HOH A:3696 , HOH A:7075 , HOH A:9332BINDING SITE FOR RESIDUE NA A 8381
185UC4SOFTWAREG A:2772 , G A:2773BINDING SITE FOR RESIDUE NA A 8382
186UC5SOFTWAREC A:197 , HOH A:5022 , HOH A:5258BINDING SITE FOR RESIDUE NA A 8384
187UC6SOFTWAREG A:1077 , A A:1079 , HOH A:7688BINDING SITE FOR RESIDUE NA A 8385
188UC7SOFTWAREG A:1452 , G A:1676BINDING SITE FOR RESIDUE CL A 8503
189UC8SOFTWAREG A:201 , G A:229 , HOH A:3180 , HOH A:4908BINDING SITE FOR RESIDUE CL A 8505
190UC9SOFTWAREC A:2388 , HOH A:3159 , PHE R:52 , HIS R:53 , PHE R:56BINDING SITE FOR RESIDUE CL A 8511
191VC1SOFTWAREG A:2582 , A A:2596 , LYS L:14 , SER L:33BINDING SITE FOR RESIDUE CL A 8512
192VC2SOFTWAREG A:1299 , G A:1300 , A A:1329 , HOH A:4659BINDING SITE FOR RESIDUE CL A 8513
193VC3SOFTWAREG A:644 , HIS M:13BINDING SITE FOR RESIDUE CL A 8514
194VC4SOFTWAREA A:1597 , A A:1598 , G A:1646BINDING SITE FOR RESIDUE CL A 8515
195VC5SOFTWAREC A:594 , U A:595 , ARG Z:115 , HOH Z:8556BINDING SITE FOR RESIDUE CL A 8517
196VC6SOFTWAREG A:1072 , G A:1087 , A A:1291BINDING SITE FOR RESIDUE CL A 8522
197VC7SOFTWAREG B:3021 , U B:3055 , A B:3056 , A B:3057 , HOH B:8520BINDING SITE FOR RESIDUE MG B 8095
198VC8SOFTWAREC B:3040 , HOH B:8407BINDING SITE FOR RESIDUE NA B 8351
199VC9SOFTWAREG B:3021 , G B:3022 , U B:3055 , A B:3057 , G B:3058 , HOH B:8520BINDING SITE FOR RESIDUE NA B 8383
200WC1SOFTWAREHOH A:3974 , HOH A:9921 , HOH C:8523 , HOH C:8552 , HOH C:8606 , HOH C:8634BINDING SITE FOR RESIDUE MG C 8065
201WC2SOFTWAREA A:2633 , PHE C:201 , GLY C:202 , GLY C:203 , HIS C:208 , HOH C:8558 , HOH C:8605BINDING SITE FOR RESIDUE NA C 8345
202WC3SOFTWARELYS C:175 , LYS C:178BINDING SITE FOR RESIDUE CL C 8509
203WC4SOFTWAREHOH A:9648 , ARG D:223 , LYS D:224BINDING SITE FOR RESIDUE CL D 8519
204WC5SOFTWAREASP E:45 , THR E:94 , LYS E:96BINDING SITE FOR RESIDUE NA E 8304
205WC6SOFTWAREA A:1133 , G A:1134 , LYS J:150 , VAL J:153 , THR J:154 , PRO J:155BINDING SITE FOR RESIDUE NA J 8309
206WC7SOFTWAREASP J:109 , ARG J:112BINDING SITE FOR RESIDUE NA J 8322
207WC8SOFTWAREHOH A:5759 , HOH A:9484 , ARG K:60 , VAL K:61 , ILE K:63 , TYR K:69BINDING SITE FOR RESIDUE NA K 8346
208WC9SOFTWAREPRO G:36 , ILE K:127 , LYS K:128 , HOH K:4038 , HOH K:4193BINDING SITE FOR RESIDUE CL K 8501
209XC1SOFTWAREPRO K:88 , LYS K:90BINDING SITE FOR RESIDUE CL K 8502
210XC2SOFTWAREG A:1119 , GLN K:52 , LYS K:56BINDING SITE FOR RESIDUE CL K 8516
211XC3SOFTWAREHOH A:5759 , GLY K:64 , ASN K:65 , TYR K:69BINDING SITE FOR RESIDUE CL K 8521
212XC4SOFTWAREHOH A:4244 , HOH A:6042 , ASN L:42 , HOH L:1797 , HOH L:2121 , HOH L:7871BINDING SITE FOR RESIDUE MG L 8069
213XC5SOFTWAREARG M:27 , GLY M:28 , GLY M:29 , GLY M:31 , ALA M:33 , GLU M:39 , HOH M:8594BINDING SITE FOR RESIDUE NA M 8380
214XC6SOFTWAREA A:693 , LYS M:52 , ARG M:53BINDING SITE FOR RESIDUE CL M 8510
215XC7SOFTWAREASN N:106 , PHE N:109 , PRO N:110 , LEU N:112 , HOH N:8634BINDING SITE FOR RESIDUE NA N 8347
216XC8SOFTWAREASN N:106 , VAL N:114 , LEU N:157 , ARG N:158 , THR N:159BINDING SITE FOR RESIDUE CL N 8518
217XC9SOFTWARELYS F:146 , ARG O:37 , LYS O:38 , ASN O:107BINDING SITE FOR RESIDUE CL O 8507
218YC1SOFTWAREHOH A:6251 , HIS P:40 , HOH P:5322BINDING SITE FOR RESIDUE CD P 8405
219YC2SOFTWAREHOH A:7029 , ASN P:44BINDING SITE FOR RESIDUE CL P 8508
220YC3SOFTWAREASP R:20 , GLY R:22 , SER R:24 , SER R:46 , HOH R:1795 , HOH R:5427BINDING SITE FOR RESIDUE NA R 8348
221YC4SOFTWAREHOH A:5916 , SER S:70 , VAL S:72 , HOH S:8524 , HOH S:8526BINDING SITE FOR RESIDUE NA S 8337
222YC5SOFTWAREU A:2659 , G A:2660 , VAL S:72 , TRP S:75 , HOH S:8515 , HOH S:8526BINDING SITE FOR RESIDUE NA S 8338
223YC6SOFTWAREU A:12 , LYS S:60 , GLN S:61 , ASN S:63BINDING SITE FOR RESIDUE NA S 8386
224YC7SOFTWARELYS S:118BINDING SITE FOR RESIDUE CL S 8506
225YC8SOFTWAREHIS T:7 , GLU T:61 , HOH T:2519BINDING SITE FOR RESIDUE NA T 8312
226YC9SOFTWAREGLN U:37 , ARG U:111 , LEU U:112 , SER U:114 , ASP U:117 , HOH U:2868BINDING SITE FOR RESIDUE MG U 8073
227ZC1SOFTWAREU A:308 , U A:335 , C A:342 , SER U:94 , ASN U:95 , HOH U:1124BINDING SITE FOR RESIDUE NA U 8343
228ZC2SOFTWARECYS V:6 , CYS V:9 , CYS V:36BINDING SITE FOR RESIDUE CD V 8401
229ZC3SOFTWAREHIS Z:133 , LYS Z:136 , LYS Z:137 , VAL Z:139 , HOH Z:8561 , HOH Z:8581 , HOH Z:8614BINDING SITE FOR RESIDUE MG Z 8109
230ZC4SOFTWAREG A:1269 , HOH A:4937 , ARG Z:169BINDING SITE FOR RESIDUE CL Z 8520
231ZC5SOFTWAREARG 1:13 , PHE 1:14 , HOH 1:8420 , LYS C:171 , ASN C:174 , HOH C:8631BINDING SITE FOR RESIDUE MG 1 8105
232ZC6SOFTWARECYS 1:42 , CYS 1:60BINDING SITE FOR RESIDUE CD 1 8403
233ZC7SOFTWARECYS 2:19 , CYS 2:22 , CYS 2:34 , CYS 2:37BINDING SITE FOR RESIDUE CD 2 8402
234ZC8SOFTWAREGLY 4:45 , GLY 4:47 , ASP 4:49 , HOH 4:8577 , HOH A:3963 , HOH A:7897BINDING SITE FOR RESIDUE MG 4 8078
235ZC9SOFTWARECYS 4:11 , CYS 4:14 , CYS 4:71BINDING SITE FOR RESIDUE CD 4 8404

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1KC8)

(-) Cis Peptide Bonds  (6, 6)

Asymmetric/Biological Unit
No.Residues
1Trp C:186 -Pro C:187
2Gly D:14 -Pro D:15
3Asn D:243 -Pro D:244
4Val E:136 -Pro E:137
5Gln H:55 -Pro H:56
6Arg N:184 -Pro N:185

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (2, 2)

Asymmetric/Biological Unit (2, 2)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_RL6_HALMA_001 *R3SRL6_HALMA  ---  ---GR2S
2UniProtVAR_RL6_HALMA_002 *E24SRL6_HALMA  ---  ---GE23S
   * ID not provided by source

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (23, 23)

Asymmetric/Biological Unit (23, 23)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1RIBOSOMAL_L37EPS01077 Ribosomal protein L37e signature.RL37_HALMA5-24  12:4-23
2RIBOSOMAL_L19EPS00526 Ribosomal protein L19e signature.RL19E_HALMA7-26  1Q:6-25
3RIBOSOMAL_L24EPS01073 Ribosomal protein L24e signature.RL24E_HALMA9-26  1V:8-25
4RIBOSOMAL_L30PS00634 Ribosomal protein L30 signature.RL30_HALMA20-52  1X:20-52
5RIBOSOMAL_L39EPS00051 Ribosomal protein L39e signature.RL39_HALMA29-45  13:28-44
6RIBOSOMAL_L18EPS01106 Ribosomal protein L18e signature.RL18E_HALMA32-49  1P:31-48
7RIBOSOMAL_L21EPS01171 Ribosomal protein L21e signature.RL21_HALMA37-62  1R:36-61
8RIBOSOMAL_L5PS00358 Ribosomal protein L5 signature.RL5_HALMA42-58  1F:41-57
9RIBOSOMAL_L29PS00579 Ribosomal protein L29 signature.RL29_HALMA43-57  1W:42-56
10RIBOSOMAL_L24PS01108 Ribosomal protein L24 signature.RL24_HALMA46-63  1U:45-62
11RIBOSOMAL_L31EPS01144 Ribosomal protein L31e signature.RL31_HALMA49-63  1Y:48-62
12RIBOSOMAL_L44EPS01172 Ribosomal protein L44e signature.RL44E_HALMA60-71  14:60-71
13RIBOSOMAL_L23PS00050 Ribosomal protein L23 signature.RL23_HALMA63-78  1T:62-77
14RIBOSOMAL_L7AEPS01082 Ribosomal protein L7Ae signature.RL7A_HALMA68-85  1H:67-84
15RIBOSOMAL_L14PS00049 Ribosomal protein L14 signature.RL14_HALMA71-97  1L:71-97
16RIBOSOMAL_L13PS00783 Ribosomal protein L13 signature.RL13_HALMA83-106  1K:83-106
17RIBOSOMAL_L1EPS00939 Ribosomal protein L1e signature.RL4_HALMA103-129  1E:103-129
18RIBOSOMAL_L15PS00475 Ribosomal protein L15 signature.RL15_HALMA108-138  1M:107-137
19RIBOSOMAL_L22PS00464 Ribosomal protein L22 signature.RL22_HALMA124-148  1S:123-147
20RIBOSOMAL_L32EPS00580 Ribosomal protein L32e signature.RL32_HALMA129-149  1Z:128-148
21RIBOSOMAL_L6_2PS00700 Ribosomal protein L6 signature 2.RL6_HALMA151-172  1G:150-171
22RIBOSOMAL_L2PS00467 Ribosomal protein L2 signature.RL2_HALMA188-199  1C:187-198
23RIBOSOMAL_L3PS00474 Ribosomal protein L3 signature.RL3_HALMA195-218  1D:194-217

(-) Exons   (0, 0)

(no "Exon" information available for 1KC8)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain 1 from PDB  Type:PROTEIN  Length:73
                                                                                                          
               SCOP domains d1kc81_ 1: Ribosomal protein L37ae                                        SCOP domains
               CATH domains 1kc8100 1:10-82  [code=2.20.25.30, no name defined]                       CATH domains
               Pfam domains ------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhh...hhhhhhhhhhhhhhhh............eeeee..eeee.....eee.......hhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------- Transcript
                1kc8 1   10 RTGRFGPRYGLKIRVRVADVEIKHKKKHKCPVCGFKKLKRAGTGIWMCGHCGYKIAGGCYQPETVAGKAVMKA   82
                                    19        29        39        49        59        69        79   

Chain 2 from PDB  Type:PROTEIN  Length:56
 aligned with RL37_HALMA | P32410 from UniProtKB/Swiss-Prot  Length:57

    Alignment length:56
                                    11        21        31        41        51      
          RL37_HALMA      2 TGAGTPSQGKKNTTTHTKCRRCGEKSYHTKKKVCSSCGFGKSAKRRDYEWQSKAGE   57
               SCOP domains d1kc82_ 2: Ribosomal protein L37e                        SCOP domains
               CATH domains 1kc8200 2:1-56  [code=2.20.25.30, no name defined]       CATH domains
               Pfam domains -Ribosomal_L37e-1kc8201 2:2-56                           Pfam domains
         Sec.struct. author ...hhhhhh......eee......eeee....ee.............hhhhh.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---RIBOSOMAL_L37E      --------------------------------- PROSITE
                 Transcript -------------------------------------------------------- Transcript
                1kc8 2    1 TGAGTPSQGKKNTTTHTKCRRCGEKSYHTKKKVCSSCGFGKSAKRRDYEWQSKAGE   56
                                    10        20        30        40        50      

Chain 3 from PDB  Type:PROTEIN  Length:46
 aligned with RL39_HALMA | P22452 from UniProtKB/Swiss-Prot  Length:50

    Alignment length:49
                                    11        21        31        41         
          RL39_HALMA      2 GKKSKATKKRLAKLDNQNSRVPAWVMLKTDREVQRNHKRRHWRRNDTDE   50
               SCOP domains d1kc83_ 3: Ribosomal protein L3   9e              SCOP domains
               CATH domains 1kc8300 3:1-49                                    CATH domains
               Pfam domains ------Ribosomal_L39-1kc8301 3:7   -49             Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhh...hhhhhhhh..---............... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------RIBOSOMAL_L39E   ----- PROSITE
                 Transcript ------------------------------------------------- Transcript
                1kc8 3    1 GKKSKATKKRLAKLDNQNSRVPAWVMLKTDE---RNHKRRHWRRNDTDE   49
                                    10        20        30|   |   40         
                                                         31  35              

Chain 4 from PDB  Type:PROTEIN  Length:92
 aligned with RL44E_HALMA | P32411 from UniProtKB/Swiss-Prot  Length:92

    Alignment length:92
                                    10        20        30        40        50        60        70        80        90  
         RL44E_HALMA      1 MQMPRRFNTYCPHCNEHQEHEVEKVRSGRQTGMKWIDRQRERNSGIGNDGKFSKVPGGDKPTKKTDLKYRCGECGKAHLREGWRAGRLEFQE   92
               SCOP domains d1kc84_ 4: Ribosomal protein L44e                                                            SCOP domains
               CATH domains 1kc8400 4:1-92  [code=3.10.450.80, no name defined]                                          CATH domains
               Pfam domains -------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eee.eeeeee....eeeeeeeee.........hhhhhhhhhhh....hhhhhh............eeeee.....ee..........eee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) -------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) -----------------------------------------------------------RIBOSOMAL_L4--------------------- PROSITE (3)
                 Transcript -------------------------------------------------------------------------------------------- Transcript
                1kc8 4    1 MQMPRRFNTYCPHCNEHQEHEVEKVRSGRQTGMKWIDRQRERNSGIGNDGKFSKVPGGDKPTKKTDLKYRCGECGKAHLREGWRAGRLEFQE   92
                                    10        20        30        40        50        60        70        80        90  

Chain A from PDB  Type:RNA  Length:2754
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
                1kc8 A   10 UAUGCCAGCUGGUGGAUUGCUCGGCUCAGGCGCUGAUGAAGGACGUGCCAAGCUGCGAUAAGCCAUGGGGAGCCGCACGGAGGCGAAGAACCAUGGAUUUCCGAAUGAGAAUCUCUAACAAUUGCUUCGCGCAAUGAGGAACCCCGAGAACUGAAACAUCUCAGUAUCGGGAGGAACAGAAAACGCAAUGUGAUGUCGUUAGUAACCGCGAGUGAACGCGAUACAGCCCAAACCGAAGCCCUCACGGGCAAUGUGGUGUCAGGGCUACCUCUCAUCAGCCGACCGUCUCGACGAAGUCUCUUGGAACAGAGCGUGAUACAGGGUGACAACCCCGUACUCGAGACCAGUACGACGUGCGGUAGUGCCAGAGUAGCGGGGGUUGGAUAUCCCUCGCGAAUAACGCAGGCAUCGACUGCGAAGGCUAAACACAACCUGAGACCGAUAGUGAACAAGUAGUGUGAACGAACGCUGCAAAGUACCCUCAGAAGGGAGGCGAAAUAGAGCAUGAAAUCAGUUGGCGAUCGAGCGACAGGGCAUACAAGGUCCCUCGACGAAUGACCGACGCGCGAGCGUCCAGUAAGACUCACGGGAAGCCGAUGUUCUGUCGUACGUUUUGAAAAACGAGCCAGGGAGUGUGUCUGCAUGGCAAGUCUAACCGGAGUAUCCGGGGAGGCACAGGGAAACCGACAUGGCCGCAGGGCUUGCCCGAGGGCCGCCGUCUUCAAGGGCGGGGAGCCAUGUGGACACGACCCGAAUCCGGACGAUCUACGCAUGGACAAGAUGAAGCGUGCCGAAAGGCACGUGGAAGUCUGUUAGAGUUGGUGUCCUACAAUACCCUCUCGUGAUCUAUGUGUAGGGGUGAAAGGCCCAUCGAGUCCGGCAACAGCUGGUUCCAAUCGAAACAUGUCGAAGCAUGACCUCCGCCGAGGUAGUCUGUGAGGUAGAGCGACCGAUUGGUCCUGUCAAACUCCAAACUUACAGACGCCGUUUGACGCGGGGAUUCCGGUGCGCGGGGUAAGCCUGUGUACCAGGAGGGGAACAACCCAGAGAUAGGUUAAGGUCCCCAAGUGUGGAUUAAGUGUAAUCCUCUGAAGGUGGUCUCGAGCCCUAGACAGCCGGGAGGUGAGCUUAGAAGCAGCUACCCUCUAAGAAAAGCGUAACAGCUUACCGGCCGAGGUUUGAGGCGCCCAAAAUGAUCGGGACUCAAAUCCACCACCGAGACCUGUCCGUACCACUCAUACUGGUAAUCGAGUAGAUUGGCGCUCUAAUUGGAUGGAAGUAGGGGUGAAAACUCCUAUGGACCGAUUAGUGACGAAAAUCCUGGCCAUAGUAGCAGCGAUAGUCGGGUGAGAACCCCGACGGCCUAAUGGAUAAGGGUUCCUCAGCACUGCUGAUCAGCUGAGGGUUAGCCGGUCCUAAGUCAUACCGCAACUCGACUAUGACGAAAUGGGAAACGGGUUAAUAUUCCCGUGCCACUAUGCAGUGAAAGUUGACGCCCUGGGGUCGAUCACGCUGGGCAUCGCCCAGUCGAACCGUCCAACUCCGUGGAAGCCGUAAUGGCAGGAAGCGGACGAACGGCGGCAUAGGGAAACGUGAUUCAACCUGGGGCCCAUGAAAAGACGAGCAUAGUGUCCGUACCGAGAACCGACACAGGUGUCCAUGGCGGCGAAAGCCAAGGCCUGUCGGGAGCAACCAACGUUAGGGAAUUCGGCAAGUUAGUCCCGUACCUUCGGAAGAAGGGAUGCCUGCUCCGGAACGGAGCAGGUCGCAGUGACUCGGAAGCUCGGACUGUCUAGUAACAACAUAGGUGACCGCAAAUCCGCAAGGACUCGUACGGUCACUGAAUCCUGCCCAGUGCAGGUAUCUGAACACCUCGUACAAGAGGACGAAGGACCUGUCAACGGCGGGGGUCUUAAGGUAGCGUAGUACCUUGCCGCAUCAGUAGCGGCUUGCAUGAAUGGAUUAACCAGAGCUUCACUGUCCCAACGUUGGGCCCGGUGAACUGUACAUUCCAGUGCGGAGUCUGGAGACACCCAGGGGGAAGCGAAGACCCUAUGGAGCUUUACUGCAGGCUGUCGCUGAGGACUCUCACUCCGGGAGGAGGACACCGAUAGCCGGGCAGUUUGACUGGGGCGGUACGCGCUCGAAAAGAUAUCGAGCGCGCCCUAUGGCUAUCUCAGCCGGGGACCCGGCGAAGAGUGCAAGAGCAAAAGAUAGCUUGACAGUGUUCUUCCCAACGAGGAACGCUGACGCGAAAGCGUGGUCUAGCGAACCAAUUAGCCUGCUUGAUGCGGGCAAUUGAUGACAGAAAAGCUACCCUAGGGAUAACAGAGUCGUCACUCGCAAGAGCACAUAUCGACCGAGUGGCUUGCUACCUCGAUGUCGGUUCCCUCCAUCCUGCCCGUGCAGAAGCGGGCAAGGGUGAGGUUGUUCGCCUAUUAAAGGAGGUCGUGAGCUGGGUUUAGACCGUCGUGAGACAGGUCGGCUGCUAUCUACUGGGUGUGUAGGUGUCUGACAAGAACGACCGUAUAGUACGAGAGGAACUACGGUUGGUGGCCACUGGUGUACCGGUUGUUCGAGAGAGCACGUGCCGGGUAGCCACGCCACACGGGGUAAGAGCUGAACGCAUCUAAGCUCGAAACCCACUUGGAAAAGAGACACCGCCGAGGUCCCGCGUACAAGACGCGGUCGAUAGACUCGGGGUGUGCGCGUCGAGGUAACGAGACGUUAAGCCCACGAGCACUAACAGACCAA 2914
                                    19        29        39        49        59        69        79        89        99       109       119     ||131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       601       611       621       631       641       651       661       671       681       691       701       711  ||   722       732       742       752       762       772       782       792       802       812       822       832       842       852       862       872       882       892       902       912       922       932       942       952       962      1000      1010      1020      1030      1040      1050      1060      1070      1080      1090      1100      1110      1120      1130      1140      1150      1160      1170      1180      1190      1200      1210      1220      1230      1240      1250      1260      1270      1280      1290      1300      1310      1320      1330      1340      1350      1360      1370      1380      1390      1400      1410      1420      1430      1440      1450      1460      1470      1480      1490      1500      1510      1520      1530      1540      1550      1561      1571      1581      1591      1601      1611      1621      1631      1641      1651      1661      1671      1681      1691      1701      1711      1721      1731      1741      1751      1761      1771      1781      1791      1801      1811      1821      1831      1841      1851      1861      1871      1881      1891      1901      1911      1921      1931      1941      1951|     1973      1983      1993      2003      2013      2023      2033      2043      2053      2063      2073      2083      2093      2103      2113      2123      2133  ||  2243      2253      2263      2273      2283      2293      2303      2313      2323      2333    ||2348      2358      2368      2378      2388      2398      2408      2418      2428      2438      2448      2458      2468      2478      2488      2498      2508      2518      2528      2538      2548      2558      2568      2578      2588      2598      2608      2618      2628      2638      2648      2658     |2670      2680      2690      2700      2710      2720      2730      2740      2750      2760      2770      2780      2790      2800      2810      2820      2830      2840      2850      2860      2870      2880      2890      2900      2910    
                                                                                                                                             125|                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       714|                                                                                                                                                                                                                                                           970|                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            1559|                                                                                                                                                                                                                                                                                                                                                                                                  1951|                                                                                                                                                                        2136|                                                                                                 2338|                                                                                                                                                                                                                                                                                                                            2664|                                                                                                                                                                                                                                                       
                                                                                                                                              128                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        716                                                                                                                                                                                                                                                            999                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             1561                                                                                                                                                                                                                                                                                                                                                                                                   1964                                                                                                                                                                         2237                                                                                                  2344                                                                                                                                                                                                                                                                                                                             2667                                                                                                                                                                                                                                                       

Chain B from PDB  Type:RNA  Length:122
                                                                                                                                                           
                1kc8 B 3001 UUAGGCGGCCACAGCGGUGGGGUUGCCUCCCGUACCCAUCCCGAACACGGAAGAUAAGCCCACCAGCGUUCCGGGGAGUACUGGAGUGCGCGAGCCUCUGGGAAACCCGGUUCGCCGCCACC 3122
                                  3010      3020      3030      3040      3050      3060      3070      3080      3090      3100      3110      3120  

Chain C from PDB  Type:PROTEIN  Length:237
 aligned with RL2_HALMA | P20276 from UniProtKB/Swiss-Prot  Length:240

    Alignment length:237
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       
           RL2_HALMA      2 GRRIQGQRRGRGTSTFRAPSHRYKADLEHRKVEDGDVIAGTVVDIEHDPARSAPVAAVEFEDGDRRLILAPEGVGVGDELQVGVSAEIAPGNTLPLAEIPEGVPVCNVESSPGDGGKFARASGVNAQLLTHDRNVAVVKLPSGEMKRLDPQCRATIGVVAGGGRTDKPFVKAGNKHHKMKARGTKWPNVRGVAMNAVDHPFGGGGRQHPGKPKSISRNAPPGRKVGDIASKRTGRGG  238
               SCOP domains d1kc8c2 C:1-90 N-terminal domain of ribosomal protein L2                                  d1kc8c1 C:91-237 C-terminal domain of ribosomal protein L2                                                                                          SCOP domains
               CATH domains 1kc8C02 C:1-78 Nucleic acid-binding proteins                                  ---1kc8C01 C:82-159  [code=2.30.30.30, no name defined]                          1kc8C03 C:160-237 Ribosomal protein L2, domain 3                               CATH domains
               Pfam domains ---------Ribosomal_L2-1kc8C02 C:10-82                                             -----Ribosomal_L2_C-1kc8C01 C:88-221                                                                                                       ---------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhh.hhhhh...............eeeeeeeee......eeeeeee....eeee..........eee...........eee.hhh....eee...................eeeee.....eeee.....eeee....eeee......hhhhh...hhhhhhhhhh.........hhhhhhhhhh..............ee...........ee......... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RIBOSOMAL_L2--------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1kc8 C    1 GRRIQGQRRGRGTSTFRAPSHRYKADLEHRKVEDGDVIAGTVVDIEHDPARSAPVAAVEFEDGDRRLILAPEGVGVGDELQVGVDAEIAPGNTLPLAEIPEGVPVCNVESSPGDGGKFARASGVNAQLLTHDRNVAVVKLPSGEMKRLDPQCRATIGVVGGGGRTDKPFVKAGNKHHKMKARGTKWPNVRGVAMNAVDHPFGGGGRQHPGKPKSISRNAPPGRKVGDIASKRTGRGG  237
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       

Chain D from PDB  Type:PROTEIN  Length:337
 aligned with RL3_HALMA | P20279 from UniProtKB/Swiss-Prot  Length:338

    Alignment length:337
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       
           RL3_HALMA      2 PQPSRPRKGSLGFGPRKRSTSETPRFNSWPSDDGQPGVQGFAGYKAGMTHVVLVNDEPNSPREGMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTLDVPEDHDPDAAEEQIRDAHEAGDLGDLRLITHTVPDAVPSVPKKKPDVMETRVGGGSVSDRLDHALDIVEDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPTVDGGFVNYGEVDGPYTLVKGSVPGPDKRLVRFRPAVRPNDQPRLDPEVRYVSNESNQG  338
               SCOP domains d1kc8d_ D: Ribosomal protein L3                                                                                                                                                                                                                                                                                                                   SCOP domains
               CATH domains 1kc8D03 D:1-38,D:207-257              1kc8D01 D:39-77,D:189-206,D:258-337    1kc8D02 D:78-188  [code=3.30.1430.10, no name defined]                                                         1kc8D01           1kc8D03 D:1-38,D:207-257                           1kc8D01 D:39-77,D:189-206,D:258-337 Translation factors                          CATH domains
               Pfam domains --------------------------------------------Ribosomal_L3-1kc8D01 D:45-312                                                                                                                                                                                                                                               ------------------------- Pfam domains
         Sec.struct. author ....................................ee..eeeeeeeeeeeeee...........eeeeeeeeee...eeeeeeeeeeee..eeeeeeeee......hhhhh.......hhhhhhhhhhhhhhhh.eeeeeeeee.hhhhh.........eeeeeee..hhhhhhhhhhhhhhhh.eehhhhhh....eeeeeee.....eehhhhhhh....hhhhhhh........................ee....eeeeeeeeeeeeeee................eeeeeee.........eeeeee.............eeee....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RIBOSOMAL_L3            ------------------------------------------------------------------------------------------------------------------------ PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1kc8 D    1 PQPSRPRKGSLGFGPRKRSTSETPRFNSWPSDDGQPGVQGFAGYKAGMTHVVLVNDEPNSPREGMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTLDVPEDHDPDAAEEQIRDAHEAGDLGDLRLITHTVPDAVPSVPKKKPDVMETRVGGGSVSDRLDHALDIVEDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPTVDGGFVNYGEVDGPYTLVKGSVPGPDKRLVRFRPAVRPNDQPRLDPEVRYVSNESNQG  337
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       

Chain E from PDB  Type:PROTEIN  Length:246
 aligned with RL4_HALMA | P12735 from UniProtKB/Swiss-Prot  Length:246

    Alignment length:246
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240      
           RL4_HALMA      1 MQATIYDLDGNTDGEVDLPDVFETPVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAESFGSGRGQAHVPKQDGRARRVPQAVKGRSAHPPKTEKDRSLDLNDKERQLAVRSALAATADADLVADRGHEFDRDEVPVVVSDDFEDLVKTQEVVSLLEALDVHADIDRADETKIKAGQGSARGRKYRRPASILFVTSDEPSTAARNLAGADVATASEVNTEDLAPGGAPGRLTVFTESALAEVAER  246
               SCOP domains d1kc8e_ E: Ribosomal protein L4                                                                                                                                                                                                                        SCOP domains
               CATH domains 1kc8E00 E:1-246  [code=3.40.1370.10, no name defined]                                                                                                                                                                                                  CATH domains
               Pfam domains ---------------Ribosomal_L4-1kc8E01 E:16-246                                                                                                                                                                                                           Pfam domains
         Sec.struct. author .eeeee.....eeeeee.hhhhhh..hhhhhhhhhhhhhhhh.............................ee..ee.........................hhhhhhhhhhhhhhhh.hhhhhhhhh.........eee.hhhhhh.hhhhhhhhhhhh.hhhhhhhh...ee..hhhhhhh..ee.....eeee....hhhhhh....eeee....hhhhhhhhhh....eeeehhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------RIBOSOMAL_L1E              --------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                1kc8 E    1 MQATIYDLDGNTDGEVDLPDVFETPVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAESFGSGRGQAHVPKLDGRARRVPQAVKGRSAHPPKTEKDRSLDLNDKERQLAVRSALAATADADLVADRGHEFDRDEVPVVVSDDFEDLVKTQEVVSLLEALDVHADIDRADETKIKAGQGSARGRKYRRPASILFVTSDEPSTAARNLAGADVATASEVNTEDLAPGGAPGRLTVFTESALAEVAER  246
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240      

Chain F from PDB  Type:PROTEIN  Length:140
 aligned with RL5_HALMA | P14124 from UniProtKB/Swiss-Prot  Length:177

    Alignment length:165
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170     
           RL5_HALMA     11 FHEMREPRIEKVVVHMGIGHGGRDLANAEDILGEITGQMPVRTKAKRTVGEFDIREGDPIGAKVTLRDEMAEEFLQTALPLAELATSQFDDTGNFSFGVEEHTEFPSQEYDPSIGIYGLDVTVNLVRPGYRVAKRDKASRSIPTKHRLNPADAVAFIESTYDVEV  175
               SCOP domains d1kc8f_ F: Ribosomal      protein L5                                                                                                                                  SCOP domains
               CATH domains 1kc8F00 F:10-174  [c     ode=3.30.1440.10, no name defined]                                                                                                           CATH domains
               Pfam domains -Ribosomal_L5-1kc8F0     1 F:11-64                     ---Ribosomal_L5_C-1kc8F02 F:68-166                                                                    -------- Pfam domains
         Sec.struct. author .......eeeeeeeee....-----..hhhhhhhhhh...ee...................eeeee.hhhhhhhhhhhhhhh............eee.--------------------.eeeeeee...hhhhhh.......hhhhh.hhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) --------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) --------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) -------------------------------RIBOSOMAL_L5     --------------------------------------------------------------------------------------------------------------------- PROSITE (4)
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1kc8 F   10 FHEMREPRIEKVVVHMGIGH-----ANAEDILGEITGQMPVRTKAKRTVGEFDIREGDPIGAKVTLRDEMAEEFLQTALPLAELATSQFDDTGNFSFG--------------------LDVTVNLVRPGYRVAKRDKASRSIPTKHRLNPADAVAFIESTYDVEV  174
                                    19        29     |  39        49        59        69        79        89        99       | -         -       129       139       149       159       169     
                                              29    35                                                                     107                  128                                              

Chain G from PDB  Type:PROTEIN  Length:172
 aligned with RL6_HALMA | P14135 from UniProtKB/Swiss-Prot  Length:178

    Alignment length:172
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171  
           RL6_HALMA      2 PRVELEIPEDVDAEQDHLDITVEGDNGSVTRRLWYPDIDVSVDGDTVVIESDEDNAKTMSTIGTFQSHIENMFHGVTEGWEYGMEVFYSHFPMQVNVEGDEVVIENFLGEKAPRRTTIHGDTDVEIDGEELTVSGPDIEAVGQTAADIEQLTRINDKDVRVFQDGVYITRKP  173
               SCOP domains d1kc8g1 G:1-79 Ribosomal protein L6                                            d1kc8g2 G:80-172 Ribosomal protein L6                                                         SCOP domains
               CATH domains 1kc8G02 G:1-79  [code=3.90.930.12, no name defined]                            1kc8G01 G:80-172  [code=3.90.930.12, no name defined]                                         CATH domains
           Pfam domains (1) ------------------------------------------------------------------------------------------Ribosomal_L6-1kc8G01 G:91-165                                              ------- Pfam domains (1)
           Pfam domains (2) ------------------------------------------------------------------------------------------Ribosomal_L6-1kc8G02 G:91-165                                              ------- Pfam domains (2)
         Sec.struct. author .eeeee.....eeeee..eeeeee..eeeeee.....eeeeee..eeeeee...hhhhhhhhhhhhhhhhhhhhhhh..eeeeeeee......eeee...eeeeehhhhh...eeee.....eeeee..eeeeee.hhhhhhhhhhhhhhh.............eeeeee.. Sec.struct. author
                 SAPs(SNPs) -S--------------------S----------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------RIBOSOMAL_L6_2        - PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1kc8 G    1 PRVELEIPEDVDAEQDHLDITVEGDNGSVTRRLWYPDIDVSVDGDTVVIESDEDNAKTMSTIGTFQSHIENMFHGVTEGWEYGMEVFYSHFPMQVNVEGDEVVIENFLGEKAPRRTTIHGDTDVEIDGEELTVSGPDIEAVGQTAADIEQLTRINDKDVRVFQDGVYITRKP  172
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170  

Chain H from PDB  Type:PROTEIN  Length:119
 aligned with RL7A_HALMA | P12743 from UniProtKB/Swiss-Prot  Length:120

    Alignment length:119
                                    11        21        31        41        51        61        71        81        91       101       111         
          RL7A_HALMA      2 PVYVDFDVPADLEDDALEALEVARDTGAVKKGTNETTKSIERGSAELVFVAEDVQPEEIVMHIPELADEKGVPFIFVEQQDDLGHAAGLEVGSAAAAVTDAGEADADVEDIADKVEELR  120
               SCOP domains d1kc8h_ H: Ribosomal protein L7ae                                                                                       SCOP domains
               CATH domains 1kc8H00 H:1-119  [code=3.30.1330.30, no name defined]                                                                   CATH domains
               Pfam domains -------------Ribosomal_L7Ae-1kc8H01 H:14-108                                                                ----------- Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhhhhhhhh.eeehhhhhhhhhhhh....eeee....hhhhh.hhhhhhhh....eeee.hhhhhhhhh.......eeee.....hhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------RIBOSOMAL_L7AE    ----------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------- Transcript
                1kc8 H    1 PVYVDFDVPADLEDDALEALEVARDTGAVKKGTNETTKSIERGSAELVFVAEDVQPEEIVMHIPELADEKGVPFIFVEQQDDLGHAAGLEVGSAAAAVTDAGAAATVLEEIADKVEELR  119
                                    10        20        30        40        50        60        70        80        90       100       110         

Chain I from PDB  Type:PROTEIN  Length:29
 aligned with RL10_HALMA | P15825 from UniProtKB/Swiss-Prot  Length:348

    Alignment length:62
                                    21        31        41        51        61        71  
          RL10_HALMA     12 IPEWKQEEVDAIVEMIESYESVGVVNIAGIPSRQLQDMRRDLHGTAELRVSRNTLLERALDD   73
               SCOP domains d1kc8i_ I:                                                     SCOP domains
               CATH domains 1kc8I00 I:12-73                                                CATH domains
               Pfam domains -------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhh---------------------------------hhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------- Transcript
                1kc8 I   12 IPEWKQEEVDAIVEMIES---------------------------------RNTLLERALDD   73
                                    21       | -         -         -         - |      71  
                                            29                                63          

Chain J from PDB  Type:PROTEIN  Length:156
                                                                                                                                                                                             
               SCOP domains d1kc8j_ J: Ribosomal protein L10e                                                                                                                            SCOP domains
               CATH domains 1kc8J00 J:1-167  [code=3.90.1170.10, no name defined]                                                                                                        CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhh.........................eee.........eeeeeee...eeeehhhhhhhhhhhhh...........eeee.....eeeee..........eeeeeeeee....eeeeeee....hhhhhhhh........eeeee...... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                1kc8 J    1 KPGAMYRNSSKPAYTRREYISGIPGKKIAQFDMGNNGAGPTYPAQVELVVEKPVQIRHNALEAARVAANRYVQNSGAAANYKFRIRKFPFHVIRENKDGMRAPFGKPVGTAARVHGANHIFIAWVNPDPNVEEAWRRAKMKVTPTINIDSSPAGNA  167
                                    10        20        30        40        50        60        70        80        90      |111       121       131       141       151       161      
                                                                                                                           97|                                                          
                                                                                                                           109                                                          

Chain K from PDB  Type:PROTEIN  Length:142
 aligned with RL13_HALMA | P29198 from UniProtKB/Swiss-Prot  Length:145

    Alignment length:142
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143  
          RL13_HALMA      4 AEFDADVIVDARDCIMGRVASQVAEQALDGETVAVVNAERAVITGREEQIVEKYEKRVDIGNDNGYFYPKRPDGIFKRTIRGMLPHKKQRGREAFESVRVYLGNPYDEDGEVLDGTSLDRLSNIKFVTLGEISETLGANKTW  145
               SCOP domains d1kc8k_ K: Ribosomal protein L13                                                                                                               SCOP domains
               CATH domains 1kc8K00 K:4-145  [code=3.90.1180.10, no name defined]                                                                                          CATH domains
               Pfam domains -----Ribosomal_L13-1kc8K01 K:9-117                                                                                ---------------------------- Pfam domains
         Sec.struct. author ......eeee....hhhhhhhhhhhhhh....eeeehhhh.eee.hhhhhhhhhhhhhhh..........hhhhhhhhhhhh.....hhhhhhhhhheee..................hhhhh..eeehhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ---------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) -------------------------------------------------------------------------------RIBOSOMAL_L13           --------------------------------------- PROSITE (3)
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1kc8 K    4 AEFDADVIVDARDCIMGRVASQVAEQALDGETVAVVNAERAVITGREEQIVEKYEKRVDIGNDNGYFYPKRPDGIFKRTIRGMLPHKKQRGREAFESVRVYLGNPYDEDGEVLDGTSLDRLSNIKFVTLGEISETLGANKTW  145
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143  

Chain L from PDB  Type:PROTEIN  Length:132
 aligned with RL14_HALMA | P22450 from UniProtKB/Swiss-Prot  Length:132

    Alignment length:132
                                    10        20        30        40        50        60        70        80        90       100       110       120       130  
          RL14_HALMA      1 MEALGADVTQGLEKGSLITCADNTGARELKVISVHGYSGTKNRHPKAGLGDKITVSVTKGTPEMRRQVLEAVVVRQRKPIRRPDGTRVKFEDNAAVIVDENEDPRGTELKGPIAREVAQRFGSVASAATMIV  132
               SCOP domains d1kc8l_ L: Ribosomal protein L14                                                                                                     SCOP domains
               CATH domains 1kc8L00 L:1-132 Ribosomal Protein L14;                                                                                               CATH domains
               Pfam domains ----------Ribosomal_L14-1kc8L01 L:11-132                                                                                             Pfam domains
         Sec.struct. author ......ee...ee...eeee.....eeeeeeeee...........ee....eeeeeeeee.......eeeeeeee....ee.....eeee...eeeee..............ee.hhh..hhhhhh....ee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------RIBOSOMAL_L14  PDB: L:71-97----------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------ Transcript
                1kc8 L    1 MEALGADVTQGLEKGSLITCADNTGARELKVISVHGYSGTKNRHPKAGLGDKITVSVTKGTPEMRRQVLEAVVVRQRKPIRRPDGTRVKFEDNAAVIVDENEDPRGTELKGPIAREVAQRFGSVASAATMIV  132
                                    10        20        30        40        50        60        70        80        90       100       110       120       130  

Chain M from PDB  Type:PROTEIN  Length:145
 aligned with RL15_HALMA | P12737 from UniProtKB/Swiss-Prot  Length:165

    Alignment length:150
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151
          RL15_HALMA      2 TSKKKRQRGSRTHGGGSHKNRRGAGHRGGRGDAGRDKHEFHNHEPLGKSGFKRPQKVQEEAATIDVREIDENVTLLAADDVAEVEDGGFRVDVRDVVEEADDADYVKVLGAGQVRHELTLIADDFSEGAREKVEGAGGSVELTDLGEERQ  151
               SCOP domains d1kc8m_ M: Ribosomal protein L15 (L15p)                                                                                                                SCOP domains
               CATH domains 1kc8M01 M:1-50                                    1kc8M02 M:51-149  [code=3.100.10.     10, no name defined]                                         - CATH domains
               Pfam domains ---------------Ribosomal_L18e-1kc8M01 M:16-143                                                                                                 ------- Pfam domains
         Sec.struct. author ..hhhhh...............hhhhhh.........................hhhhh..eeeeehhhhhhh...........-----.eee.hhh........eeeee.........eeee.eehhhhhhhhhhh..eeee........ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------------------------------------------RIBOSOMAL_L15  PDB: M:107-137  ------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                1kc8 M    1 TSKKKRQRGSRTHGGGSHKNRRGAGHRGGRGDAGRDKHEFHNHEPLGKSGFKRPQKVQEEAATIDVREIDENVTLLAADDVAE-----FRVDVRDVVEEADDADYVKVLGAGQVRHELTLIADDFSEGAREKVEGAGGSVELTDLGEERQ  150
                                    10        20        30        40        50        60        70        80  |     90       100       110       120       130       140       150
                                                                                                             83    89                                                             

Chain N from PDB  Type:PROTEIN  Length:194
                                                                                                                                                                                                                                   
               SCOP domains d1kc8n_ N: Ribosomal protein L15e                                                                                                                                                                  SCOP domains
               CATH domains 1kc8N00 N:1-194 Ribosomal protein l15e                                                                                                                                                             CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhh...hhhhhhhhhhhhhhhh....eee.....hhhhhhhhh......eeeeeeeee.............hhhhh.........hhhhhhhhhhhhhh...eeeeeeeeee...eeeeeeeee............hhhhhhhhhh.hhhhh.hhhhhhhh...............hhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1kc8 N    1 ARSAYSYIREAWKRPKEGQIAELMWHRMQEWRNEPAVVRIERPTRLDRARSLGYKAKQGIIVVRVAIRKGSSRRTRFNKGRRSKRMMVNRITRKKNIQRIAEERANRKFPNLRVLNSYSVGEDGRHKWHEVILIDPDHPAIKSDDQLSWISRTRHRLRTFRGLTSAGRRCRGLRGQGKGSEKVRPSLRVNGAKA  194
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190    

Chain O from PDB  Type:PROTEIN  Length:186
 aligned with RL18_HALMA | P14123 from UniProtKB/Swiss-Prot  Length:187

    Alignment length:186
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181      
          RL18_HALMA      2 ATGPRYKVPMRRRREARTDYHQRLRLLKSGKPRLVARKSNKHVRAQLVTLGPNGDDTLASAHSSDLAEYGWEAPTGNMPSAYLTGLLAGLRAQEAGVEEAVLDIGLNSPTPGSKVFAIQEGAIDAGLDIPHNDDVLADWQRTRGAHIAEYDEQLEEPLYSGDFDAADLPEHFDELRETLLDGDIEL  187
               SCOP domains d1kc8o_ O: Ribosomal protein L18 (L18p)                                                                                                                                                    SCOP domains
               CATH domains 1kc8O00 O:1-186  [code=3.30.420.100, no name defined]                                                                                                                                      CATH domains
               Pfam domains --------Ribosomal_L18p-1kc8O01 O:9-129                                                                                           --------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhh...hhhhhhhhhhh...eeeeee....eeeeeee......eeeeeee.hhhhhhh......hhhhhhhhhhhhhhhhhhh.....eee.........hhhhhhhhhhhhhh.....hhhhh..hhhhhhhhhhhhhhh..............hhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                1kc8 O    1 ATGPRYKVPMRRRREARTDYHQRLRLLKSGKPRLVARKSNKHVRAQLVTLGPNGDDTLASAHSSDLAEYGWEAPTGNMPSAYLTGLLAGLRAQEAGVEEAVLDIGLNSPTPGSKVFAIQEGAIDAGLDIPHNDDVLADWQRTRGAHIAEYDEQLEEPLYSGDFDAADLPEHFDELRETLLDGDIEL  186
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180      

Chain P from PDB  Type:PROTEIN  Length:115
 aligned with RL18E_HALMA | P12733 from UniProtKB/Swiss-Prot  Length:116

    Alignment length:115
                                    11        21        31        41        51        61        71        81        91       101       111     
         RL18E_HALMA      2 SKTNPRLSSLIADLKSAARSSGGAVWGDVAERLEKPRRTHAEVNLGRIERYAQEDETVVVPGKVLGSGVLQKDVTVAAVDFSGTAETKIDQVGEAVSLEQAIENNPEGSHVRVIR  116
               SCOP domains d1kc8p_ P: Ribosomal protein L18e                                                                                   SCOP domains
               CATH domains 1kc8P00 P:1-115  [code=3.100.10.10, no name defined]                                                                CATH domains
               Pfam domains ---------------------Ribosomal_L18e-1kc8P01 P:22-99                                                ---------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhheeeehhhhhhhh....eeeeeeeee.........eeeeeeehhhhhhhhhhhheeeehhhhhhhh.....eee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ------------------------------RIBOSOMAL_L18E    ------------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------- Transcript
                1kc8 P    1 SKTNPRLSSLIADLKSAARSSGGAVWGDVAERLEKPRRTHAEVNLGRIERYAQEDETVVVPGKVLGSGVLQKDVTVAAVDFSGTAETKIDQVGEAVSLEQAIENNPEGSHVRVIR  115
                                    10        20        30        40        50        60        70        80        90       100       110     

Chain Q from PDB  Type:PROTEIN  Length:143
 aligned with RL19E_HALMA | P14119 from UniProtKB/Swiss-Prot  Length:149

    Alignment length:143
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141   
         RL19E_HALMA      2 TDLSAQKRLAADVLDVGKNRVWFNPERQGDIADAITREDVRELVDEGAIQAKDKKGNSRGRARERQKKRAYGHQKGAGSRKGKAGARQNSKEDWESRIRAQRTKLRELRDEGTLSSSQYRDLYDKAGGGEFDSVADLERYIDA  144
               SCOP domains d1kc8q_ Q: Ribosomal protein L19 (L19e)                                                                                                         SCOP domains
               CATH domains 1kc8Q01 Q:1-55  [code=1.10.1650.10, no name defined]   1kc8Q03 Q:56-88 Single Heli x bin1kc8Q02 Q:89-143  [code=1.10.1200.60, no name defined]  CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhh..hhh.eee...hhhhhhhh.hhhhhhhhhhh..eee.......hhhhhhhhhhhhh....hhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhh....hhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) -----RIBOSOMAL_L19E      ---------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1kc8 Q    1 TDLSAQKRLAADVLDVGKNRVWFNPERQGDIADAITREDVRELVDEGAIQAKDKKGNSRGRARERQKKRAKGHQKGAGSRKGKAGARQNSKEDWESRIRAQRTKLRELRDEGTLSSSQYRDLYDKAGGGEFDSVADLERYIDA  143
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140   

Chain R from PDB  Type:PROTEIN  Length:95
 aligned with RL21_HALMA | P12734 from UniProtKB/Swiss-Prot  Length:96

    Alignment length:95
                                    11        21        31        41        51        61        71        81        91     
          RL21_HALMA      2 PSSNGPLEGTRGKLKNKPRDRGTSPPQRAVEEFDDGEKVHLKIDPSVPNGRFHPRFDGQTGTVEGKQGDAYKVDIVDGGKEKTIIVTAAHLRRQE   96
               SCOP domains d1kc8r_ R: Ribosomal proteins L21e                                                              SCOP domains
               CATH domains 1kc8R00 R:1-95 Myosin S1 fragment SH3-like barrel                                               CATH domains
               Pfam domains Ribosomal_L21e-1kc8R01 R:1-95                                                                   Pfam domains
         Sec.struct. author ................hhhhh....hhhhh.......eeee...........hhhhh..eeeeeeee..eeeeeeee..eeeeeeehhh.eee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) -----------------------------------RIBOSOMAL_L21E            ---------------------------------- PROSITE (3)
                 Transcript ----------------------------------------------------------------------------------------------- Transcript
                1kc8 R    1 PSSNGPLEGTRGKLKNKPRDRGTSPPQRAVEEFDDGEKVHLKIDPSVPNGRFHPRFDGQTGTVEGKQGDAYKVDIVDGGKEKTIIVTAAHLRRQE   95
                                    10        20        30        40        50        60        70        80        90     

Chain S from PDB  Type:PROTEIN  Length:150
 aligned with RL22_HALMA | P10970 from UniProtKB/Swiss-Prot  Length:155

    Alignment length:150
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151
          RL22_HALMA      2 GISYSVEADPDTTAKAMLRERQMSFKHSKAIAREIKGKTAGEAVDYLEAVIEGDQPVPFKQHNSGVGHKSKVDGWDAGRYPEKASKAFLDLLENAVGNADHQGFDGEAMTIKHVAAHKVGEQQGRKPRAMGRASAWNSPQVDVELILEEP  151
               SCOP domains d1kc8s_ S: Ribosomal protein L22                                                                                                                       SCOP domains
               CATH domains 1kc8S00 S:1-150 Ribosomal Protein L22; Chain A                                                                                                         CATH domains
               Pfam domains ---------------Ribosomal_L22-1kc8S01 S:16-149                                                                                                        - Pfam domains
         Sec.struct. author ........hhh.eeeeeeeee..hhhhhhhhhhhhh..hhhhhhhhhhhhhhh...ee...................ee.hhhhhhhhhhhhhhhhhhhhh........eeeeeeeeeeeee..eee.hhh.eee..eeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE (2)
                PROSITE (3) --------------------------------------------------------------------------------------------------------------------------RIBOSOMAL_L22            --- PROSITE (3)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                1kc8 S    1 GISYSVEADPDTTAKAMLRERQMSFKHSKAIAREIKGKTAGEAVDYLEAVIEGDQPVPFKQHNSGVGHKSKVDGWDAGRYPEKASKAFLDLLENAVGNADHQGFDGEAMTIKHVAAHKVGEQQGRKPRAMGRASAWNSPQVDVELILEEP  150
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150

Chain T from PDB  Type:PROTEIN  Length:81
 aligned with RL23_HALMA | P12732 from UniProtKB/Swiss-Prot  Length:85

    Alignment length:81
                                    11        21        31        41        51        61        71        81 
          RL23_HALMA      2 SWDVIKHPHVTEKAMNDMDFQNKLQFAVDDRASKGEVADAVEEQYDVTVEQVNTQNTMDGEKKAVVRLSEDDDAQEVASRI   82
               SCOP domains d1kc8t_ T: Ribosomal protein L23                                                  SCOP domains
               CATH domains 1kc8T00 T:1-81  [code=3.30.70.330, no name defined]                               CATH domains
               Pfam domains -Ribosomal_L23-1kc8T01 T:2-81                                                     Pfam domains
         Sec.struct. author ....eeee..hhhhhhhhhhhheeeeee....hhhhhhhhhhhhhh..eeeeeeee.....eeeeeee....hhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) --------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) --------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) -------------------------------------------------------------RIBOSOMAL_L23   ---- PROSITE (4)
                 Transcript --------------------------------------------------------------------------------- Transcript
                1kc8 T    1 SWDVIKHPHVTEKAMNDMDFQNKLQFAVDDRASKGEVADAVEEQYDVTVEQVNTQNTMDGEKKAVVRLSEDDDAQEVASRI   81
                                    10        20        30        40        50        60        70        80 

Chain U from PDB  Type:PROTEIN  Length:119
 aligned with RL24_HALMA | P10972 from UniProtKB/Swiss-Prot  Length:120

    Alignment length:119
                                    11        21        31        41        51        61        71        81        91       101       111         
          RL24_HALMA      2 SKQPDKQRKSQRRAPLHERHKQVRATLSADLREEYGQRNVRVNAGDTVEVLRGDFAGEEGEVINVDLDKAVIHVEDVTLEKTDGEEVPRPLDTSNVRVTDLDLEDEKREARLESEDDSA  120
               SCOP domains d1kc8u_ U: Ribosomal proteins L24 (L24p)                                                                                SCOP domains
               CATH domains 1kc8U00 U:1-119  [code=2.30.30.30, no name defined]                                                                     CATH domains
               Pfam domains -------------------------------------------KOW-1kc8U01 U:44-75             -------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhh.hhhhhhhh.eeeehhhhhhhhh..eee.....eeee........eeeeeeee....eeee...eee.....eee...hhh.eeeee....hhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------RIBOSOMAL_L24     --------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------- Transcript
                1kc8 U    1 SKQPDKQRKSQRRAPLHERHKQVRATLSADLREEYGQRNVRVNAGDTVEVLRGDFAGEEGEVINVDLDKAVIHVEDVTLEKTDGEEVPRPLDTSNVRVTDLDLEDEKREARLESEDDSA  119
                                    10        20        30        40        50        60        70        80        90       100       110         

Chain V from PDB  Type:PROTEIN  Length:53
 aligned with RL24E_HALMA | P14116 from UniProtKB/Swiss-Prot  Length:67

    Alignment length:53
                                    14        24        34        44        54   
         RL24E_HALMA      5 RECDYCGTDIEPGTGTMFVHKDGATTHFCSSKCENNADLGREARNLEWTDTAR   57
               SCOP domains d1kc8v_ V: Ribosomal protein L24e                     SCOP domains
               CATH domains 1kc8V00 V:4-56  [code=2.30.170.20, no name defined]   CATH domains
               Pfam domains Ribosomal_L24e-1kc8V01 V:4-56                         Pfam domains
         Sec.struct. author ...............eeee.....eeee.hhhhhhhhhh..hhhhh....... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------- PROSITE (2)
                PROSITE (3) ----RIBOSOMAL_L24E    ------------------------------- PROSITE (3)
                 Transcript ----------------------------------------------------- Transcript
                1kc8 V    4 RECDYCGTDIEPGTGTMFVHKDGATTHFCSSKCENNADLGREARNLEWTDTAR   56
                                    13        23        33        43        53   

Chain W from PDB  Type:PROTEIN  Length:65
 aligned with RL29_HALMA | P10971 from UniProtKB/Swiss-Prot  Length:71

    Alignment length:65
                                    11        21        31        41        51        61     
          RL29_HALMA      2 TVLHVQEIRDMTPAEREAELDDLKTELLNARAVQAAGGAPENPGRIKELRKAIARIKTIQGEEGD   66
               SCOP domains d1kc8w_ W: Ribosomal protein L29 (L29p)                           SCOP domains
               CATH domains 1kc8W00 W:1-65  [code=1.10.287.310, no name defined]              CATH domains
               Pfam domains ----Ribosomal_L29-1kc8W01 W:5-63                               -- Pfam domains
         Sec.struct. author ...hhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ----------------------------------------------------------------- PROSITE (3)
                PROSITE (4) ----------------------------------------------------------------- PROSITE (4)
                PROSITE (5) -----------------------------------------RIBOSOMAL_L29  --------- PROSITE (5)
                 Transcript ----------------------------------------------------------------- Transcript
                1kc8 W    1 TVLHVQEIRDMTPAEREAELDDLKTELLNARAVQAAGGAPENPGRIKELRKAIARIKTIQGEEGD   65
                                    10        20        30        40        50        60     

Chain X from PDB  Type:PROTEIN  Length:154
 aligned with RL30_HALMA | P14121 from UniProtKB/Swiss-Prot  Length:154

    Alignment length:154
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150    
          RL30_HALMA      1 MHALVQLRGEVNMHTDIQDTLEMLNIHHVNHCTLVPETDAYRGMVAKVNDFVAFGEPSQETLETVLATRAEPLEGDADVDDEWVAEHTDYDDISGLAFALLSEETTLREQGLSPTLRLHPPRGGHDGVKHPVKEGGQLGKHDTEGIDDLLEAMR  154
               SCOP domains d1kc8x_ X: Archaeal L30 (L30a)                                                                                                                             SCOP domains
               CATH domains 1kc8X01 X:1-57,X:114-154                                 1kc8X02 X:58-113  [code=1.10.15.30, no name defined]    1kc8X01 X:1-57,X:114-154                  CATH domains
               Pfam domains Ribosomal_L30-1kc8X01 X:1-52                        ------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeee.......hhhhhhhhhhh......eeeee..hhhhhhhhhhhh..eeee..hhhhhhhhhhhhh.........hhhhhhhhh...hhhhhhhhhhh.............ee.............hhhhh...ee.hhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ---------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ---------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) -------------------RIBOSOMAL_L30  PDB: X:20-52      ------------------------------------------------------------------------------------------------------ PROSITE (4)
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1kc8 X    1 MHALVQLRGEVNMHTDIQDTLEMLNIHHVNHCTLVPETDAYRGMVAKVNDFVAFGEPSQETLETVLATRAEPLEGDADVDDEWVAEHTDYDDISGLAFALLSEETTLREQGLSPTLRLHPPRGGHDGVKHPVKEGGQLGKHDTEGIDDLLEAMR  154
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150    

Chain Y from PDB  Type:PROTEIN  Length:82
 aligned with RL31_HALMA | P18138 from UniProtKB/Swiss-Prot  Length:92

    Alignment length:82
                                    17        27        37        47        57        67        77        87  
          RL31_HALMA      8 ERVVTIPLRDARAEPNHKRADKAMILIREHLAKHFSVDEDAVRLDPSINEAAWARGRANTPSKIRVRAARFEEEGEAIVEAE   89
               SCOP domains d1kc8y_ Y: Ribosomal protein L31e                                                  SCOP domains
               CATH domains 1kc8Y00 Y:7-88  [code=3.10.440.10, no name defined]                                CATH domains
               Pfam domains Ribosomal_L31e-1kc8Y01 Y:7-87                                                    - Pfam domains
         Sec.struct. author .eeeeee.hhhhhhhhhhhhhhhhhhhhhhhhhhh......eeehhhhhhhhhh........eeeeeeeee....eeeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) -----------------------------------------RIBOSOMAL_L31E -------------------------- PROSITE (2)
                 Transcript ---------------------------------------------------------------------------------- Transcript
                1kc8 Y    7 ERVVTIPLRDARAEPNHKRADKAMILIREHLAKHFSVDEDAVRLDPSINEAAWARGRANTPSKIRVRAARFEEEGEAIVEAE   88
                                    16        26        36        46        56        66        76        86  

Chain Z from PDB  Type:PROTEIN  Length:142
 aligned with RL32_HALMA | P12736 from UniProtKB/Swiss-Prot  Length:241

    Alignment length:142
                                   105       115       125       135       145       155       165       175       185       195       205       215       225       235  
          RL32_HALMA     96 TELQARGLTEKTPDLSDEDARLLTQRHRVGKPQFNRQDHHKKKRVSTSWRKPRGQLSKQRRGIKGKGDTVEAGFRSPTAVRGKHPSGFEEVRVHNVDDLEGVDGDTEAVRIASKVGARKRERIEEEAEDAGIRVLNPTYVEV  237
               SCOP domains d1kc8z_ Z: Ribosomal protein L32e                                                                                                              SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -----------------------------Ribosomal_L32e-1kc8Z01 Z:124-231                                                                            ----- Pfam domains
         Sec.struct. author .eeee..........hhhhhhhhhhhhhhh........................................hhhhh.............eeeee.hhhhhh......eeeee....hhhhhhhhhhhhhhh........eeee Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ---------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ---------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) ---------------------------------RIBOSOMAL_L32E       ---------------------------------------------------------------------------------------- PROSITE (4)
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1kc8 Z   95 TELQARGLTEKTPDLSDEDARLLTQRHRVGKPQFNRQDHHKKKRVSTSWRKPRGQLSKQRRGIKGKGDTVEAGFRSPTAVRGKHPSGFEEVRVHNVDDLEGVDGDTEAVRIASKVGARKRERIEEEAEDAGIRVLNPTYVEV  236
                                   104       114       124       134       144       154       164       174       184       194       204       214       224       234  

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (29, 30)

Asymmetric/Biological Unit
(-)
Fold: RL5-like (90)
(-)
Class: Peptides (792)

(-) CATH Domains  (32, 36)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (23, 25)

Asymmetric/Biological Unit
(-)
Clan: KOW (56)
(-)
Clan: OB (224)
(-)
Clan: RRM (206)
(-)
Clan: Ribo_L29 (45)
(-)
Clan: S11_L18p (67)
(-)
Clan: TRASH (61)

(-) Gene Ontology  (23, 225)

Asymmetric/Biological Unit(hide GO term definitions)
Chain 2   (RL37_HALMA | P32410)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
    GO:0008270    zinc ion binding    Interacting selectively and non-covalently with zinc (Zn) ions.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain 3   (RL39_HALMA | P22452)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain 4   (RL44E_HALMA | P32411)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0070180    large ribosomal subunit rRNA binding    Interacting selectively and non-covalently with the large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
    GO:0000049    tRNA binding    Interacting selectively and non-covalently with transfer RNA.
    GO:0008270    zinc ion binding    Interacting selectively and non-covalently with zinc (Zn) ions.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain C   (RL2_HALMA | P20276)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0015934    large ribosomal subunit    The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site).
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain D   (RL3_HALMA | P20279)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain E   (RL4_HALMA | P12735)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain F   (RL5_HALMA | P14124)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
    GO:0000049    tRNA binding    Interacting selectively and non-covalently with transfer RNA.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain G   (RL6_HALMA | P14135)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain H   (RL7A_HALMA | P12743)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0004526    ribonuclease P activity    Catalysis of the endonucleolytic cleavage of RNA, removing 5' extra nucleotides from tRNA precursor.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0090501    RNA phosphodiester bond hydrolysis    The RNA metabolic process in which the phosphodiester bonds between ribonucleotides are cleaved by hydrolysis.
    GO:0090502    RNA phosphodiester bond hydrolysis, endonucleolytic    The chemical reactions and pathways involving the hydrolysis of internal 3',5'-phosphodiester bonds in one or two strands of ribonucleotides.
    GO:0042254    ribosome biogenesis    A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits; includes transport to the sites of protein synthesis.
    GO:0001682    tRNA 5'-leader removal    Generation of the mature 5'-end of the tRNA, usually via an endonucleolytic cleavage by RNase P.
    GO:0008033    tRNA processing    The process in which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group.
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain I   (RL10_HALMA | P15825)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0070180    large ribosomal subunit rRNA binding    Interacting selectively and non-covalently with the large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
biological process
    GO:0042254    ribosome biogenesis    A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits; includes transport to the sites of protein synthesis.
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain K   (RL13_HALMA | P29198)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0015934    large ribosomal subunit    The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site).
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain L   (RL14_HALMA | P22450)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain M   (RL15_HALMA | P12737)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0015934    large ribosomal subunit    The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site).
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain O   (RL18_HALMA | P14123)
molecular function
    GO:0008097    5S rRNA binding    Interacting selectively and non-covalently with 5S ribosomal RNA, the smallest RNA constituent of a ribosome.
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain P   (RL18E_HALMA | P12733)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain Q   (RL19E_HALMA | P14119)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0070180    large ribosomal subunit rRNA binding    Interacting selectively and non-covalently with the large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain R   (RL21_HALMA | P12734)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain S   (RL22_HALMA | P10970)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to