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(-) Description

Title :  STRUCTURE OF A DEACYLATED TRNA MINIHELIX BOUND TO THE E SITE OF THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
 
Authors :  T. M. Schmeing, P. B. Moore, T. A. Steitz
Date :  27 Aug 03  (Deposition) - 11 Nov 03  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.10
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,0,1,2,3,9
Keywords :  Ribosome 50S, Protein-Protein Complex, Rna-Rna Complex, Protein-Rna Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  T. M. Schmeing, P. B. Moore, T. A. Steitz
Structures Of Deacylated Trna Mimics Bound To The E Site Of The Large Ribosomal Subunit
Rna V. 9 1345 2003
PubMed-ID: 14561884  |  Reference-DOI: 10.1261/RNA.5120503
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - 23S RIBOSOMAL RNA
    Chains0
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 2 - 5S RIBOSOMAL RNA
    Chains9
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 3 - DEACYLATED TRNA MINIHELIX
    Chains3
    EngineeredYES
    SyntheticYES
 
Molecule 4 - 50S RIBOSOMAL PROTEIN L2P
    ChainsA
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymHMAL2, HL4
 
Molecule 5 - 50S RIBOSOMAL PROTEIN L3P
    ChainsB
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymHMAL3, HL1
 
Molecule 6 - 50S RIBOSOMAL PROTEIN L4E
    ChainsC
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymHMAL4, HL6
 
Molecule 7 - 50S RIBOSOMAL PROTEIN L5P
    ChainsD
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymHMAL5, HL13
 
Molecule 8 - 50S RIBOSOMAL PROTEIN L6P
    ChainsE
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymHMAL6, HL10
 
Molecule 9 - 50S RIBOSOMAL PROTEIN L7AE
    ChainsF
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymHS6
 
Molecule 10 - 50S RIBOSOMAL PROTEIN L10E
    ChainsG
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymACIDIC RIBOSOMAL PROTEIN P0 HOMOLOG, HMAL10
 
Molecule 11 - L10 RIBOSOMAL PROTEIN
    ChainsH
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 12 - 50S RIBOSOMAL PROTEIN L13P
    ChainsI
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 13 - 50S RIBOSOMAL PROTEIN L14P
    ChainsJ
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymHMAL13
 
Molecule 14 - 50S RIBOSOMAL PROTEIN L15P
    ChainsK
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymHMAL15, HL9
 
Molecule 15 - L15 RIBOSOMAL PROTEIN
    ChainsL
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 16 - 50S RIBOSOMAL PROTEIN L18P
    ChainsM
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymHMAL18, HL12
 
Molecule 17 - 50S RIBOSOMAL PROTEIN L18E
    ChainsN
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymHL29, L19
 
Molecule 18 - 50S RIBOSOMAL PROTEIN L19E
    ChainsO
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymHMAL19, HL24
 
Molecule 19 - 50S RIBOSOMAL PROTEIN L21E
    ChainsP
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymHL31
 
Molecule 20 - 50S RIBOSOMAL PROTEIN L22P
    ChainsQ
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymHMAL22, HL23
 
Molecule 21 - 50S RIBOSOMAL PROTEIN L23P
    ChainsR
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymHMAL23, HL25, L21
 
Molecule 22 - 50S RIBOSOMAL PROTEIN L24P
    ChainsS
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymHMAL24, HL16, HL15
 
Molecule 23 - 50S RIBOSOMAL PROTEIN L24E
    ChainsT
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymHL21/HL22
 
Molecule 24 - 50S RIBOSOMAL PROTEIN L29P
    ChainsU
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymHMAL29, HL33
 
Molecule 25 - 50S RIBOSOMAL PROTEIN L30P
    ChainsV
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymHMAL30, HL20, HL16
 
Molecule 26 - 50S RIBOSOMAL PROTEIN L31E
    ChainsW
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymL34, HL30
 
Molecule 27 - 50S RIBOSOMAL PROTEIN L32E
    ChainsX
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymHL5
 
Molecule 28 - L37AE 50S RIBOSOMAL PROTEIN
    ChainsY
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 29 - 50S RIBOSOMAL PROTEIN L37E
    ChainsZ
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymL35E
 
Molecule 30 - 50S RIBOSOMAL PROTEIN L39E
    Chains1
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymHL39E, HL46E
 
Molecule 31 - 50S RIBOSOMAL PROTEIN L44E
    Chains2
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    SynonymLA, HLA

 Structural Features

(-) Chains, Units

  12345678910111213141516171819202122232425262728293031
Asymmetric/Biological Unit ABCDEFGHIJKLMNOPQRSTUVWXYZ01239

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (5, 234)

Asymmetric/Biological Unit (5, 234)
No.NameCountTypeFull Name
1CD5Ligand/IonCADMIUM ION
2CL22Ligand/IonCHLORIDE ION
3K2Ligand/IonPOTASSIUM ION
4MG119Ligand/IonMAGNESIUM ION
5NA86Ligand/IonSODIUM ION

(-) Sites  (234, 234)

Asymmetric Unit (234, 234)
No.NameEvidenceResiduesDescription
001AC1SOFTWAREG 0:2482 , A 0:2483 , C 0:2533 , C 0:2534 , HOH 0:3135 , HOH 0:7229 , HOH 0:8699BINDING SITE FOR RESIDUE MG 0 8001
002AC2SOFTWAREG 0:627 , A 0:2483 , C 0:2534 , HOH 0:3832 , HOH 0:7209 , HOH 0:7210BINDING SITE FOR RESIDUE MG 0 8002
003AC3SOFTWAREA 0:876 , G 0:877 , A 0:2624 , HOH 0:3181 , HOH A:8511 , HOH A:8532BINDING SITE FOR RESIDUE MG 0 8003
004AC4SOFTWAREG 0:456 , A 0:459 , HOH 0:3296 , HOH 0:7216 , HOH 0:8566 , HOH 0:9298BINDING SITE FOR RESIDUE MG 0 8004
005AC5SOFTWAREA 0:1836 , U 0:1838 , A 0:1839 , HOH 0:3131 , HOH 0:7230 , HOH 0:7231BINDING SITE FOR RESIDUE MG 0 8005
006AC6SOFTWAREU 0:821 , C 0:822 , G 0:854 , HOH 0:3137 , HOH 0:3268 , HOH 0:9329BINDING SITE FOR RESIDUE MG 0 8006
007AC7SOFTWAREU 0:832 , A 0:1839 , A 0:1840 , HOH 0:7221 , HOH 0:8527 , HOH 0:9876BINDING SITE FOR RESIDUE MG 0 8007
008AC8SOFTWAREU 0:919 , C 0:2464 , A 0:2465 , HOH 0:3147 , HOH 0:7224 , HOH 0:7304BINDING SITE FOR RESIDUE MG 0 8008
009AC9SOFTWAREG 0:2093 , G 0:2611 , A 0:2612 , HOH 0:3253 , HOH 0:6898 , HOH 0:7225 , NA 0:8358BINDING SITE FOR RESIDUE MG 0 8009
010BC1SOFTWAREG 0:836 , U 0:2615 , HOH 0:3352 , HOH 0:8884 , GLN B:230 , HOH B:8525BINDING SITE FOR RESIDUE MG 0 8010
011BC2SOFTWAREG 0:824 , G 0:854BINDING SITE FOR RESIDUE MG 0 8011
012BC3SOFTWAREG 0:28 , HOH 0:3164 , HOH 0:7305 , HOH 0:8558 , HOH 0:9160 , HOH 0:9743BINDING SITE FOR RESIDUE MG 0 8012
013BC4SOFTWAREG 0:877 , G 0:2623 , HOH 0:3158 , HOH 0:3170 , HOH 0:8540 , HOH A:8628BINDING SITE FOR RESIDUE MG 0 8013
014BC5SOFTWAREG 0:2102 , G 0:2537 , HOH 0:3174 , HOH 0:3675 , HOH 0:7207 , HOH 0:8552BINDING SITE FOR RESIDUE MG 0 8014
015BC6SOFTWAREA 0:844 , A 0:1689 , HOH 0:3140 , HOH 0:7239 , HOH 0:8543BINDING SITE FOR RESIDUE MG 0 8015
016BC7SOFTWAREA 0:1504 , A 0:1678 , C 0:1679 , HOH 0:3260 , HOH 0:7232 , HOH 0:7233BINDING SITE FOR RESIDUE MG 0 8016
017BC8SOFTWAREG 0:456 , HOH 0:3456 , HOH 0:7217 , HOH 0:8934 , HOH C:8357 , HOH C:8460BINDING SITE FOR RESIDUE MG 0 8017
018BC9SOFTWAREA 0:1291 , G 0:1292 , HOH 0:3133 , HOH 0:6933 , HOH 0:7306 , HOH 0:9736BINDING SITE FOR RESIDUE MG 0 8018
019CC1SOFTWAREA 0:2011 , HOH 0:3662 , HOH 0:6709 , HOH 0:7234 , HOH 0:7235 , HOH 0:7236BINDING SITE FOR RESIDUE MG 0 8019
020CC2SOFTWAREC 0:1830 , HOH 0:7220 , HOH 0:7237 , HOH 0:8643 , HOH 0:8646 , HOH 0:8720BINDING SITE FOR RESIDUE MG 0 8020
021CC3SOFTWAREG 0:2304 , HOH 0:3154 , HOH 0:3155 , HOH 0:7222 , HOH 0:7223 , HOH 0:9482BINDING SITE FOR RESIDUE MG 0 8021
022CC4SOFTWAREG 0:2097 , U 0:2539 , G 0:2540 , HOH 0:3382 , HOH 0:7226 , HOH 0:8632 , HOH 0:8977BINDING SITE FOR RESIDUE MG 0 8022
023CC5SOFTWAREG 0:2616 , G 0:2617 , G 0:2618 , HOH 0:3333 , HOH 0:7241 , HOH 0:7242BINDING SITE FOR RESIDUE MG 0 8023
024CC6SOFTWAREA 0:1381 , HOH 0:4617 , HOH 0:7307 , HOH 0:7308 , HOH 0:9455BINDING SITE FOR RESIDUE MG 0 8024
025CC7SOFTWAREU 0:1120 , G 0:1121 , HOH 0:3680 , HOH 0:7243 , HOH 0:7309BINDING SITE FOR RESIDUE MG 0 8025
026CC8SOFTWAREC 0:2608 , G 0:2609 , U 0:2610 , HOH 0:7244 , HOH 0:7245 , HOH 0:8913BINDING SITE FOR RESIDUE MG 0 8026
027CC9SOFTWAREC 0:240 , G 0:269 , HOH 0:3385 , HOH 0:3525 , HOH 0:3667 , HOH L:8643BINDING SITE FOR RESIDUE MG 0 8027
028DC1SOFTWAREA 0:1448 , U 0:1677 , HOH 0:3192 , HOH 0:3215 , HOH 0:3226 , HOH 0:9097 , HOH R:8347BINDING SITE FOR RESIDUE MG 0 8028
029DC2SOFTWAREA 0:1502 , U 0:1503 , A 0:1504 , C 0:1679 , HOH 0:7248 , HOH 0:7249 , HOH 0:7250 , HOH 0:7251BINDING SITE FOR RESIDUE MG 0 8029
030DC3SOFTWAREU 0:1748 , U 0:1749 , HOH 0:3156 , HOH 0:7218 , HOH 0:7219 , HOH 0:7227BINDING SITE FOR RESIDUE MG 0 8030
031DC4SOFTWAREU 0:777 , C 0:778 , HOH 0:7253 , HOH 0:7254 , HOH 0:7255 , NA 0:8325 , HOH 0:9792BINDING SITE FOR RESIDUE MG 0 8031
032DC5SOFTWAREU 0:2115 , HOH 0:3241 , HOH 0:3302 , HOH 0:3700 , HOH 0:9506 , HOH A:8629BINDING SITE FOR RESIDUE MG 0 8032
033DC6SOFTWAREA 0:1747 , U 0:1748 , U 0:1749 , G 0:2585 , HOH 0:3329 , HOH 0:9199BINDING SITE FOR RESIDUE MG 0 8033
034DC7SOFTWAREA 0:2302 , A 0:2303 , HOH 0:3159 , HOH 0:3284 , HOH 0:4361 , HOH 0:7256BINDING SITE FOR RESIDUE MG 0 8034
035DC8SOFTWAREG 0:1484 , HOH 0:3231 , HOH 0:7257 , HOH 0:7258 , HOH 0:7311 , HOH 0:7312BINDING SITE FOR RESIDUE MG 0 8035
036DC9SOFTWAREG 0:956 , HOH 0:3184 , HOH 0:7259 , HOH 0:7260 , HOH 0:7261 , HOH 0:8889BINDING SITE FOR RESIDUE MG 0 8036
037EC1SOFTWAREA 0:2553 , A 0:2576 , HOH 0:3165 , HOH 0:7313 , HOH 0:8599 , HOH 0:9652 , HOH 0:9726BINDING SITE FOR RESIDUE MG 0 8037
038EC2SOFTWAREHOH 0:3144 , HOH 0:3166 , HOH 0:3185 , HOH 0:3187 , HOH 0:7263 , HOH 0:8803BINDING SITE FOR RESIDUE MG 0 8038
039EC3SOFTWAREA 0:114 , U 0:115 , HOH 0:3476 , HOH 0:4595 , HOH 0:7264 , HOH 0:7265 , HOH 0:9429BINDING SITE FOR RESIDUE MG 0 8039
040EC4SOFTWAREU 0:392 , HOH 0:3303 , HOH 0:4144 , HOH 0:7315 , HOH 0:7316 , HOH 0:9213BINDING SITE FOR RESIDUE MG 0 8040
041EC5SOFTWAREG 0:196 , A 0:227 , C 0:228 , HOH 0:3619 , HOH 0:3711 , HOH 0:4863BINDING SITE FOR RESIDUE MG 0 8041
042EC6SOFTWAREU 0:1309 , U 0:1346 , HOH 0:3173 , HOH 0:3923 , HOH 0:7266 , HOH 0:8956BINDING SITE FOR RESIDUE MG 0 8042
043EC7SOFTWAREG 0:816 , G 0:817 , HOH 0:6886 , HOH 0:7317 , MG 0:8106 , HOH 0:9333BINDING SITE FOR RESIDUE MG 0 8043
044EC8SOFTWAREC 0:2048 , C 0:2088 , A 0:2089 , HOH 0:9811 , GLY Q:65 , HOH Q:8588BINDING SITE FOR RESIDUE MG 0 8044
045EC9SOFTWAREG 0:1979 , HOH 0:7267 , HOH 0:7318 , HOH 0:7319 , HOH 0:7320BINDING SITE FOR RESIDUE MG 0 8045
046FC1SOFTWAREG 0:1794 , HOH 0:6767 , HOH 0:7321 , HOH 0:7322BINDING SITE FOR RESIDUE MG 0 8046
047FC2SOFTWAREA 0:1098 , HOH 0:5757 , HOH 0:7335 , HOH 0:9646BINDING SITE FOR RESIDUE MG 0 8047
048FC3SOFTWAREA 0:2746 , G 0:2750 , HOH 0:5365 , HOH 0:5749 , HOH 0:7323 , HOH 0:7357BINDING SITE FOR RESIDUE MG 0 8048
049FC4SOFTWAREG 0:2421 , U 0:2422 , C 0:2423 , HOH 0:7324BINDING SITE FOR RESIDUE MG 0 8049
050FC5SOFTWAREC 0:2248 , HOH 0:6790BINDING SITE FOR RESIDUE MG 0 8050
051FC6SOFTWAREG 0:641 , HOH 0:3614 , HOH 0:7268 , HOH 0:7269BINDING SITE FOR RESIDUE MG 0 8051
052FC7SOFTWAREU 0:1125 , C 0:1129 , HOH 0:3142 , HOH 0:7337 , G 9:3092 , HOH 9:8388 , HOH 9:8416BINDING SITE FOR RESIDUE MG 0 8052
053FC8SOFTWAREG 0:471 , HOH 0:3903 , HOH 0:5102 , HOH 0:8725 , HOH 0:8765 , HOH 0:9558BINDING SITE FOR RESIDUE MG 0 8053
054FC9SOFTWAREC 0:162 , U 0:2276 , HOH 0:7270 , HOH 0:7271 , HOH 0:8952BINDING SITE FOR RESIDUE MG 0 8054
055GC1SOFTWAREA 0:2757 , HOH 0:3183 , HOH 0:3485 , HOH 0:7289 , HOH 0:9499 , ASN B:335BINDING SITE FOR RESIDUE MG 0 8056
056GC2SOFTWAREU 0:1883 , U 0:2012 , G 0:2013 , HOH 0:4505 , GLN A:207 , HOH A:8632BINDING SITE FOR RESIDUE MG 0 8057
057GC3SOFTWAREG 0:2013 , HOH 0:3278 , HOH 0:7272 , HOH 0:7273 , HOH A:8630 , HOH A:8632BINDING SITE FOR RESIDUE MG 0 8058
058GC4SOFTWAREG 0:2618 , HOH 0:3237 , HOH 0:3562 , HOH 0:7228 , MG 0:8085 , HOH 0:8557 , HOH 0:8561BINDING SITE FOR RESIDUE MG 0 8059
059GC5SOFTWAREG 0:175 , U 0:224 , G 0:393 , HOH 0:7274 , HOH 0:7275 , HOH 0:7276 , HOH 0:8692BINDING SITE FOR RESIDUE MG 0 8060
060GC6SOFTWAREA 0:1369 , U 0:2650 , HOH 0:7277 , HOH 0:7278 , HOH 0:7279 , HOH 0:9339BINDING SITE FOR RESIDUE MG 0 8061
061GC7SOFTWAREG 0:1489 , G 0:1491 , HOH 0:3150 , HOH 0:3470 , HOH 0:5661 , HOH 0:8915BINDING SITE FOR RESIDUE MG 0 8062
062GC8SOFTWAREHOH 0:3692 , HOH 0:6481 , HOH 0:6905 , HOH 0:7215 , HOH 0:7288 , HOH 0:7339BINDING SITE FOR RESIDUE MG 0 8063
063GC9SOFTWAREU 0:2277 , U 0:2278 , G 0:2471 , HOH 0:3267 , HOH 0:3275 , HOH 0:9111BINDING SITE FOR RESIDUE MG 0 8064
064HC1SOFTWAREA 0:1845 , U 0:1846 , G 0:1884 , HOH 0:7281 , ASN A:188 , ARG A:190BINDING SITE FOR RESIDUE MG 0 8067
065HC2SOFTWAREA 0:2568 , HOH 0:3266 , HOH 0:4316 , HOH 0:5710 , HOH 0:7340 , HOH 0:9256BINDING SITE FOR RESIDUE MG 0 8068
066HC3SOFTWAREA 0:166 , G 0:219 , HOH 0:3330 , HOH 0:4452 , HOH 0:8644BINDING SITE FOR RESIDUE MG 0 8070
067HC4SOFTWAREHOH 0:3623 , HOH 0:5541 , HOH 0:6891 , HOH 0:7021 , HOH 0:7286 , HOH 0:7287BINDING SITE FOR RESIDUE MG 0 8071
068HC5SOFTWAREG 0:953 , U 0:954 , HOH 0:3507 , HOH 0:6885 , HOH 0:7285 , HOH 0:7341 , HOH 0:9748BINDING SITE FOR RESIDUE MG 0 8072
069HC6SOFTWAREA 0:1286 , A 0:1287 , HOH 0:7282 , HOH 0:7283 , HOH V:7873 , HOH V:7874BINDING SITE FOR RESIDUE MG 0 8074
070HC7SOFTWAREA 0:907 , A 0:908 , HOH 0:3153 , HOH 0:3428 , HOH 0:4431 , HOH 0:7284BINDING SITE FOR RESIDUE MG 0 8075
071HC8SOFTWAREHOH 0:6328 , HOH 0:7290 , HOH 0:7291 , HOH 0:7342 , HOH 0:7343 , HOH 1:7875BINDING SITE FOR RESIDUE MG 0 8076
072HC9SOFTWAREC 0:880 , U 0:883 , HOH 0:3141 , HOH 0:7292 , HOH 0:7293 , HOH 0:8764BINDING SITE FOR RESIDUE MG 0 8077
073IC1SOFTWAREA 0:165 , A 0:167 , C 0:168 , HOH 0:3130 , HOH 0:3136 , HOH 0:3146BINDING SITE FOR RESIDUE MG 0 8079
074IC2SOFTWAREA 0:1684 , U 0:1724 , HOH 0:3716 , HOH 0:3995 , HOH 0:7294 , HOH 0:7344BINDING SITE FOR RESIDUE MG 0 8080
075IC3SOFTWAREC 0:1420 , C 0:1421 , G 0:1438 , HOH 0:3609 , HOH 0:9133BINDING SITE FOR RESIDUE MG 0 8081
076IC4SOFTWAREA 0:1437 , HOH 0:4649 , HOH 0:4734 , HOH 0:7352 , HOH 0:7353BINDING SITE FOR RESIDUE MG 0 8082
077IC5SOFTWAREA 0:1754 , HOH 0:3223 , HOH 0:3663 , HOH 0:5842 , HOH 0:7295 , HOH 0:7345BINDING SITE FOR RESIDUE MG 0 8083
078IC6SOFTWAREA 0:1742 , G 0:1743 , HOH 0:3151 , HOH 0:8772 , HOH 0:8895 , HOH 0:9273BINDING SITE FOR RESIDUE MG 0 8084
079IC7SOFTWAREG 0:2617 , G 0:2618 , HOH 0:3301 , HOH 0:3862 , HOH 0:3987 , MG 0:8059 , HOH 0:8557 , HOH 0:9123BINDING SITE FOR RESIDUE MG 0 8085
080IC8SOFTWAREA 0:532 , U 0:533 , HOH 0:3246 , HOH 0:3486 , HOH 0:7296 , HOH 0:7297BINDING SITE FOR RESIDUE MG 0 8086
081IC9SOFTWAREA 0:682 , G 0:683 , HOH 0:3191 , HOH 0:7354BINDING SITE FOR RESIDUE MG 0 8087
082JC1SOFTWAREG 0:2540 , G 0:2611 , HOH 0:3801 , NA 0:8339 , HOH 0:8583 , HOH 0:8817 , HOH 0:9562BINDING SITE FOR RESIDUE MG 0 8088
083JC2SOFTWAREC 0:515 , A 0:516 , U 0:517 , G 0:518 , HOH 0:7298 , HOH 0:7346 , HOH 0:7347BINDING SITE FOR RESIDUE MG 0 8089
084JC3SOFTWAREA 0:2103 , U 0:2478 , HOH 0:3134 , HOH 0:3311 , HOH 0:5468BINDING SITE FOR RESIDUE MG 0 8090
085JC4SOFTWAREG 0:918 , HOH 0:5964 , HOH 0:7299 , HOH 0:8614 , HOH 0:9068 , HOH 0:9841BINDING SITE FOR RESIDUE MG 0 8091
086JC5SOFTWAREC 0:1844 , HOH 0:3161 , HOH 0:3175 , HOH 0:7348BINDING SITE FOR RESIDUE MG 0 8092
087JC6SOFTWAREA 0:1070 , G 0:1071 , HOH 0:3167 , HOH 0:3197 , HOH 0:3238 , HOH 0:9205BINDING SITE FOR RESIDUE MG 0 8093
088JC7SOFTWAREU 0:1096 , C 0:1257 , HOH 0:7300 , HOH 0:7349BINDING SITE FOR RESIDUE MG 0 8094
089JC8SOFTWAREG 0:1848 , G 0:1849 , HOH 0:3178 , HOH 0:3216 , HOH 0:3347 , HOH 0:3378 , MG 0:8116BINDING SITE FOR RESIDUE MG 0 8096
090JC9SOFTWAREG 0:863 , U 0:864 , HOH 0:3186 , HOH 0:3190 , HOH 0:5040 , HOH 0:9858BINDING SITE FOR RESIDUE MG 0 8097
091KC1SOFTWAREA 0:907 , HOH 0:3199 , HOH 0:3262 , HOH 0:9461 , HOH 0:9889 , HOH X:8560BINDING SITE FOR RESIDUE MG 0 8098
092KC2SOFTWAREA 0:2612 , HOH 0:3182 , HOH 0:3193 , HOH 0:9531BINDING SITE FOR RESIDUE MG 0 8099
093KC3SOFTWAREG 0:2080 , HOH 0:3281 , HOH 0:3760 , HOH 0:4993 , HOH 0:7301 , HOH 0:7302BINDING SITE FOR RESIDUE MG 0 8100
094KC4SOFTWAREU 0:2107 , C 0:2281 , U 0:2282 , HOH 0:3261 , HOH 0:4123 , HOH 0:6385BINDING SITE FOR RESIDUE MG 0 8101
095KC5SOFTWAREA 0:2434 , U 0:2458 , HOH 0:7358 , HOH 0:8775 , HOH 0:9411 , HOH 2:8518BINDING SITE FOR RESIDUE MG 0 8102
096KC6SOFTWAREG 0:2578 , G 0:2579 , HOH 0:7350BINDING SITE FOR RESIDUE MG 0 8103
097KC7SOFTWAREC 0:2104 , C 0:2105 , HOH 0:7211 , HOH 0:7212 , HOH 0:7213BINDING SITE FOR RESIDUE MG 0 8104
098KC8SOFTWAREG 0:817 , HOH 0:3119 , HOH 0:6881 , HOH 0:6886 , HOH 0:7317 , MG 0:8043 , HOH O:5319BINDING SITE FOR RESIDUE MG 0 8106
099KC9SOFTWAREA 0:1106 , A 0:1107 , HOH 0:7325 , HOH 0:7326 , HOH 0:7327 , HOH 0:7328BINDING SITE FOR RESIDUE MG 0 8107
100LC1SOFTWAREHOH 0:5585 , HOH 0:6960 , HOH 0:7330 , HOH 0:7331 , HOH 0:7332BINDING SITE FOR RESIDUE MG 0 8108
101LC2SOFTWAREU 0:903 , A 0:1357 , HOH 0:3438 , HOH 0:4886 , HOH 0:5519 , HOH 0:9029BINDING SITE FOR RESIDUE MG 0 8110
102LC3SOFTWAREG 0:2609 , HOH 0:3213 , HOH 0:3236 , HOH 0:5088 , HOH 0:5235 , HOH 0:9815BINDING SITE FOR RESIDUE MG 0 8111
103LC4SOFTWAREA 0:187 , HOH 0:3243 , HOH 0:3282 , HOH 0:8649 , HOH 0:8853 , HOH 0:9089BINDING SITE FOR RESIDUE MG 0 8112
104LC5SOFTWAREA 0:2112 , HOH 0:3267 , HOH 0:3436 , HOH 0:5618 , HOH 0:5884 , HOH 0:9111BINDING SITE FOR RESIDUE MG 0 8113
105LC6SOFTWAREA 0:2430 , HOH 0:3475 , HOH 0:8871 , HOH 0:8970 , A 3:76 , HOH 3:3672BINDING SITE FOR RESIDUE MG 0 8114
106LC7SOFTWAREHOH 0:3795 , HOH 0:3810 , HOH 0:5894 , HOH 0:6084 , HOH A:8552 , HOH A:8633BINDING SITE FOR RESIDUE MG 0 8115
107LC8SOFTWAREU 0:1850 , HOH 0:3178 , HOH 0:3204 , HOH 0:3378 , HOH 0:6213 , MG 0:8096 , HOH A:8552BINDING SITE FOR RESIDUE MG 0 8116
108LC9SOFTWAREA 0:1840 , C 0:1841 , A 0:2022 , HOH 0:4138 , HOH 0:6042 , HOH 0:8746BINDING SITE FOR RESIDUE MG 0 8117
109MC1SOFTWAREHOH 3:3276 , HOH 3:7899BINDING SITE FOR RESIDUE MG 0 8119
110MC2SOFTWAREG 0:2102 , G 0:2482 , C 0:2536BINDING SITE FOR RESIDUE K 0 8201
111MC3SOFTWAREC 0:162 , U 0:163 , U 0:172 , HOH 0:4419 , HOH 0:8535 , HOH 0:8633 , HOH 0:8668 , ARG L:82BINDING SITE FOR RESIDUE K 0 8202
112MC4SOFTWAREC 0:1069 , G 0:1072 , G 0:1087 , HOH 0:4465 , HOH 0:9686 , HOH 0:9716BINDING SITE FOR RESIDUE NA 0 8301
113MC5SOFTWAREG 0:1119 , U 0:1120 , G 0:1121 , HOH 0:5171BINDING SITE FOR RESIDUE NA 0 8302
114MC6SOFTWAREA 0:643 , G 0:644 , U 0:904 , C 0:1353 , G 0:1354 , ARG K:8BINDING SITE FOR RESIDUE NA 0 8303
115MC7SOFTWAREA 0:630 , A 0:631 , A 0:2074 , HOH 0:3600 , HOH 0:4197 , HOH 0:5272BINDING SITE FOR RESIDUE NA 0 8305
116MC8SOFTWAREG 0:2092 , G 0:2093 , G 0:2094 , A 0:2612 , A 0:2649BINDING SITE FOR RESIDUE NA 0 8306
117MC9SOFTWAREC 0:40 , G 0:41 , A 0:442 , C 0:443BINDING SITE FOR RESIDUE NA 0 8307
118NC1SOFTWAREC 0:1394 , U 0:1432 , G 0:1433 , U 0:1724 , HOH 0:9930BINDING SITE FOR RESIDUE NA 0 8308
119NC2SOFTWAREA 0:2577 , G 0:2578 , G 0:2579 , HOH 0:4006BINDING SITE FOR RESIDUE NA 0 8310
120NC3SOFTWAREG 0:2524 , G 0:2525 , HOH 0:3093 , HOH 0:4154 , HOH 0:8706BINDING SITE FOR RESIDUE NA 0 8311
121NC4SOFTWAREG 0:2399 , HOH 0:3348 , HOH 0:4614 , HOH 0:9471BINDING SITE FOR RESIDUE NA 0 8313
122NC5SOFTWAREU 0:2541 , U 0:2607 , HOH 0:8854 , HOH 0:9647 , TRP B:242BINDING SITE FOR RESIDUE NA 0 8314
123NC6SOFTWAREA 0:165 , A 0:166 , A 0:167 , HOH 0:9208BINDING SITE FOR RESIDUE NA 0 8315
124NC7SOFTWAREC 0:896 , A 0:897 , HOH 0:5801 , HOH 0:8548BINDING SITE FOR RESIDUE NA 0 8316
125NC8SOFTWAREG 0:1416 , G 0:1417 , HOH 0:8799 , TRP 1:42 , ASN 1:45 , HOH 1:4135BINDING SITE FOR RESIDUE NA 0 8317
126NC9SOFTWAREG 0:2543 , G 0:2544 , HOH 0:3442 , NA 0:8320 , HOH 0:9981BINDING SITE FOR RESIDUE NA 0 8318
127OC1SOFTWAREA 0:2465 , G 0:2466 , HOH 0:3770 , HOH 0:5534 , HOH 0:8580 , ASP K:36 , HOH K:8537BINDING SITE FOR RESIDUE NA 0 8319
128OC2SOFTWAREG 0:2543 , G 0:2544 , G 0:2611 , U 0:2615 , NA 0:8318 , HOH 0:8577 , HOH 0:8609 , HOH 0:9264BINDING SITE FOR RESIDUE NA 0 8320
129OC3SOFTWAREG 0:836 , U 0:837 , A 0:1736 , A 0:1737 , ARG B:229BINDING SITE FOR RESIDUE NA 0 8321
130OC4SOFTWAREG 0:885 , A 0:2112 , G 0:2113 , C 0:2475 , C 0:2476 , HOH 0:3981BINDING SITE FOR RESIDUE NA 0 8323
131OC5SOFTWAREA 0:45 , C 0:130 , U 0:146 , G 0:147 , HOH 0:3640 , HOH 0:9014BINDING SITE FOR RESIDUE NA 0 8324
132OC6SOFTWAREA 0:776 , U 0:777 , U 0:779 , HOH 0:7123 , MG 0:8031 , HOH 0:9148 , HOH 0:9792BINDING SITE FOR RESIDUE NA 0 8325
133OC7SOFTWAREG 0:1971 , G 0:2009 , A 0:2010 , U 0:2012BINDING SITE FOR RESIDUE NA 0 8326
134OC8SOFTWAREU 0:821 , C 0:853 , G 0:854 , U 0:1831 , HOH 0:8556 , HOH 0:9252 , HOH 0:9720BINDING SITE FOR RESIDUE NA 0 8327
135OC9SOFTWAREG 0:56 , A 0:59 , A 0:60 , G 0:61 , HOH 0:4706 , HOH 0:5959BINDING SITE FOR RESIDUE NA 0 8328
136PC1SOFTWAREG 0:66 , U 0:107 , U 0:108 , HOH 0:6061BINDING SITE FOR RESIDUE NA 0 8329
137PC2SOFTWAREC 0:141 , G 0:142 , HOH 0:8757BINDING SITE FOR RESIDUE NA 0 8330
138PC3SOFTWAREU 0:170 , C 0:171 , C 0:218 , G 0:221 , HOH 0:8823BINDING SITE FOR RESIDUE NA 0 8331
139PC4SOFTWAREG 0:386 , G 0:387 , G 0:388 , C 0:401 , U 0:402 , HOH 0:6550BINDING SITE FOR RESIDUE NA 0 8332
140PC5SOFTWAREC 0:1894 , U 0:1897 , G 0:1898 , U 0:1939BINDING SITE FOR RESIDUE NA 0 8333
141PC6SOFTWAREC 0:1894 , A 0:1895 , G 0:1896 , U 0:1897 , HOH 0:4740BINDING SITE FOR RESIDUE NA 0 8334
142PC7SOFTWAREG 0:622 , U 0:623 , A 0:628 , A 0:630 , HOH 0:9392BINDING SITE FOR RESIDUE NA 0 8335
143PC8SOFTWAREG 0:1706 , G 0:1707 , HOH 0:4826 , HOH 0:6819 , HOH 0:7150 , HOH 0:9443BINDING SITE FOR RESIDUE NA 0 8336
144PC9SOFTWAREG 0:2540 , G 0:2611 , G 0:2616 , U 0:2645 , HOH 0:3801 , MG 0:8088 , HOH 0:9545BINDING SITE FOR RESIDUE NA 0 8339
145QC1SOFTWAREU 0:1740 , U 0:1741 , G 0:2033 , HOH 0:6299 , HOH 0:9554BINDING SITE FOR RESIDUE NA 0 8340
146QC2SOFTWAREG 0:681 , A 0:682 , G 0:683 , HOH 0:3530BINDING SITE FOR RESIDUE NA 0 8341
147QC3SOFTWAREG 0:892 , C 0:893 , HOH 0:5112 , HOH 0:5754BINDING SITE FOR RESIDUE NA 0 8342
148QC4SOFTWAREU 0:308 , U 0:335 , A 0:339 , C 0:342 , SER S:94 , ASN S:95 , HOH S:1124BINDING SITE FOR RESIDUE NA 0 8343
149QC5SOFTWAREU 0:2663 , A 0:2811 , A 0:2812 , A 0:2816 , G 0:2817 , HOH 0:8745BINDING SITE FOR RESIDUE NA 0 8344
150QC6SOFTWAREA 0:914 , C 0:915 , C 0:1043 , G 0:1045BINDING SITE FOR RESIDUE NA 0 8349
151QC7SOFTWAREU 0:623 , U 0:624 , G 0:901 , HOH 0:6436BINDING SITE FOR RESIDUE NA 0 8350
152QC8SOFTWAREA 0:955 , HOH 0:4747 , HOH 0:6089 , C 9:3081 , U 9:3082BINDING SITE FOR RESIDUE NA 0 8352
153QC9SOFTWAREA 0:1040 , G 0:1295 , A 0:1296 , HOH 0:4370 , GLY K:14 , HOH K:8514BINDING SITE FOR RESIDUE NA 0 8353
154RC1SOFTWAREU 0:768 , C 0:769 , G 0:2111 , A 0:2112 , HOH 0:7057BINDING SITE FOR RESIDUE NA 0 8354
155RC2SOFTWAREG 0:1119 , C 0:1243 , HOH 0:4307 , THR I:47BINDING SITE FOR RESIDUE NA 0 8355
156RC3SOFTWAREC 0:920 , U 0:2278 , G 0:2279 , A 0:2463 , HOH 0:8974BINDING SITE FOR RESIDUE NA 0 8356
157RC4SOFTWAREG 0:941 , U 0:942 , G 0:1024 , C 0:1025 , HOH 0:5761BINDING SITE FOR RESIDUE NA 0 8357
158RC5SOFTWAREG 0:2611 , HOH 0:6898 , HOH 0:7240 , MG 0:8009 , HOH 0:8856 , HOH 0:9005BINDING SITE FOR RESIDUE NA 0 8358
159RC6SOFTWAREG 0:898 , A 0:922 , A 0:923 , G 0:924 , U 0:2109 , HOH 0:5141BINDING SITE FOR RESIDUE NA 0 8359
160RC7SOFTWAREA 0:453 , U 0:454 , C 0:478 , G 0:479BINDING SITE FOR RESIDUE NA 0 8360
161RC8SOFTWAREU 0:837 , HOH 0:4399 , HOH 0:6300 , HOH 0:6808 , GLN B:230BINDING SITE FOR RESIDUE NA 0 8361
162RC9SOFTWAREA 0:167 , C 0:168 , G 0:2110 , G 0:2111 , U 0:2277BINDING SITE FOR RESIDUE NA 0 8362
163SC1SOFTWAREU 0:1359 , C 0:1360 , HOH 0:9994BINDING SITE FOR RESIDUE NA 0 8363
164SC2SOFTWAREG 0:636 , U 0:2057 , G 0:2058 , HOH 0:9115 , HOH 0:9336BINDING SITE FOR RESIDUE NA 0 8364
165SC3SOFTWAREU 0:391 , U 0:392 , U 0:398 , C 0:399 , LYS L:193 , ALA L:194BINDING SITE FOR RESIDUE NA 0 8365
166SC4SOFTWAREG 0:544 , G 0:545 , G 0:610 , U 0:611 , HOH 0:3334 , HOH 0:3393 , HOH 0:9386 , HOH 0:9404BINDING SITE FOR RESIDUE NA 0 8366
167SC5SOFTWAREG 0:464 , G 0:475 , HOH 0:4102 , HOH 0:9349 , ARG C:55 , HOH C:8385BINDING SITE FOR RESIDUE NA 0 8367
168SC6SOFTWAREG 0:798 , G 0:814 , U 0:815 , HOH 0:3397BINDING SITE FOR RESIDUE NA 0 8368
169SC7SOFTWAREU 0:391 , U 0:392 , A 0:395 , U 0:398 , HOH 0:5047 , HOH 0:6056BINDING SITE FOR RESIDUE NA 0 8369
170SC8SOFTWAREG 0:1832 , A 0:2022 , HOH 0:3613 , HOH 0:8626BINDING SITE FOR RESIDUE NA 0 8370
171SC9SOFTWAREG 0:2491 , U 0:2492 , U 0:2528 , G 0:2529 , HOH 0:9149BINDING SITE FOR RESIDUE NA 0 8371
172TC1SOFTWAREU 0:919 , G 0:921 , A 0:922 , G 0:924BINDING SITE FOR RESIDUE NA 0 8372
173TC2SOFTWAREG 0:1576 , U 0:1577 , G 0:1618 , G 0:1619 , HOH 0:3194 , HOH 0:6771BINDING SITE FOR RESIDUE NA 0 8373
174TC3SOFTWAREC 0:195 , G 0:196 , A 0:415 , G 0:416BINDING SITE FOR RESIDUE NA 0 8374
175TC4SOFTWAREG 0:868 , G 0:869 , A 0:886 , G 0:887BINDING SITE FOR RESIDUE NA 0 8375
176TC5SOFTWAREA 0:632 , C 0:633 , A 0:2538 , U 0:2539 , HOH 0:3163 , HOH 0:4352BINDING SITE FOR RESIDUE NA 0 8376
177TC6SOFTWAREG 0:911 , U 0:1293 , A 0:1294 , G 0:1295 , HOH 0:5829BINDING SITE FOR RESIDUE NA 0 8377
178TC7SOFTWAREC 0:762 , G 0:902 , U 0:903 , HOH 0:9724 , HIS K:18 , HOH K:8533 , HOH K:8550BINDING SITE FOR RESIDUE NA 0 8378
179TC8SOFTWAREU 0:831 , U 0:832 , G 0:833 , HOH 0:3229 , HOH 0:3930BINDING SITE FOR RESIDUE NA 0 8379
180TC9SOFTWAREG 0:2585 , U 0:2586 , U 0:2587 , G 0:2592 , HOH 0:3206 , HOH 0:6552 , HOH 0:8852BINDING SITE FOR RESIDUE NA 0 8381
181UC1SOFTWAREG 0:2772 , G 0:2773BINDING SITE FOR RESIDUE NA 0 8382
182UC2SOFTWAREC 0:197 , HOH 0:4513BINDING SITE FOR RESIDUE NA 0 8384
183UC3SOFTWAREG 0:1077 , A 0:1079 , HOH 0:7144BINDING SITE FOR RESIDUE NA 0 8385
184UC4SOFTWAREG 0:1676BINDING SITE FOR RESIDUE CL 0 8503
185UC5SOFTWAREG 0:201 , U 0:202BINDING SITE FOR RESIDUE CL 0 8505
186UC6SOFTWAREC 0:2388 , PHE P:52 , HIS P:53BINDING SITE FOR RESIDUE CL 0 8511
187UC7SOFTWAREG 0:2582 , A 0:2596 , HOH 0:4592 , LYS J:14 , SER J:33BINDING SITE FOR RESIDUE CL 0 8512
188UC8SOFTWAREG 0:1299 , G 0:1300 , A 0:1328 , A 0:1329 , HOH 0:4158BINDING SITE FOR RESIDUE CL 0 8513
189UC9SOFTWAREG 0:644 , HOH 0:7179 , HIS K:13BINDING SITE FOR RESIDUE CL 0 8514
190VC1SOFTWAREA 0:1597 , A 0:1598 , G 0:1646BINDING SITE FOR RESIDUE CL 0 8515
191VC2SOFTWAREG 0:1119 , C 0:1243 , LYS I:56BINDING SITE FOR RESIDUE CL 0 8516
192VC3SOFTWAREC 0:594 , U 0:595 , ARG X:115 , HOH X:8549BINDING SITE FOR RESIDUE CL 0 8517
193VC4SOFTWAREG 0:1072 , G 0:1087 , A 0:1291BINDING SITE FOR RESIDUE CL 0 8522
194VC5SOFTWAREG 9:3021 , A 9:3056 , A 9:3057 , HOH 9:8512BINDING SITE FOR RESIDUE MG 9 8095
195VC6SOFTWAREC 9:3040BINDING SITE FOR RESIDUE NA 9 8351
196VC7SOFTWAREG 9:3021 , G 9:3022 , U 9:3055 , A 9:3057 , G 9:3058 , HOH 9:8512BINDING SITE FOR RESIDUE NA 9 8383
197VC8SOFTWAREHOH 0:3480 , HOH A:8549 , HOH A:8601 , HOH A:8631BINDING SITE FOR RESIDUE MG A 8065
198VC9SOFTWAREG 0:1873 , HOH 0:7351 , ASP A:26 , HOH A:8548 , HOH A:8561BINDING SITE FOR RESIDUE MG A 8066
199WC1SOFTWAREA 0:2633 , PHE A:201 , GLY A:202 , GLY A:203 , HIS A:208 , HOH A:8555 , HOH A:8600BINDING SITE FOR RESIDUE NA A 8345
200WC2SOFTWARELYS A:178BINDING SITE FOR RESIDUE CL A 8509
201WC3SOFTWAREHOH 0:3272 , HOH 0:3308 , HOH 0:7174 , HOH 0:7338 , HOH B:8627 , HOH B:8668BINDING SITE FOR RESIDUE MG B 8055
202WC4SOFTWAREHOH 0:9104 , HOH 0:9171 , ARG B:223 , LYS B:224BINDING SITE FOR RESIDUE CL B 8519
203WC5SOFTWAREASP C:45 , THR C:94 , LYS C:96 , HOH C:8312BINDING SITE FOR RESIDUE NA C 8304
204WC6SOFTWAREA 0:1133 , G 0:1134 , LYS H:150 , VAL H:153 , THR H:154 , PRO H:155BINDING SITE FOR RESIDUE NA H 8309
205WC7SOFTWAREC 0:2287 , ASP H:109 , ARG H:112BINDING SITE FOR RESIDUE NA H 8322
206WC8SOFTWAREHOH 0:5244 , HOH 0:9004 , ARG I:60 , VAL I:61 , ILE I:63 , TYR I:69BINDING SITE FOR RESIDUE NA I 8346
207WC9SOFTWAREILE I:127 , LYS I:128 , HOH I:4038 , HOH I:4193BINDING SITE FOR RESIDUE CL I 8501
208XC1SOFTWAREPRO I:88 , HIS I:89 , LYS I:90BINDING SITE FOR RESIDUE CL I 8502
209XC2SOFTWAREGLY I:64 , ASN I:65 , GLY I:68 , TYR I:69BINDING SITE FOR RESIDUE CL I 8521
210XC3SOFTWAREHOH 0:3196 , HOH 0:3751 , HOH 0:5532 , ASN J:42 , HOH J:1797 , HOH J:7871BINDING SITE FOR RESIDUE MG J 8069
211XC4SOFTWAREARG K:27 , GLY K:28 , GLY K:29 , GLY K:31 , ALA K:33 , GLU K:39 , HOH K:8588BINDING SITE FOR RESIDUE NA K 8380
212XC5SOFTWAREA 0:693 , ARG K:53BINDING SITE FOR RESIDUE CL K 8510
213XC6SOFTWAREASN L:106 , PHE L:109 , PRO L:110 , LEU L:112 , HOH L:8628BINDING SITE FOR RESIDUE NA L 8347
214XC7SOFTWAREASN L:106 , ARG L:113 , VAL L:114 , LEU L:157 , ARG L:158 , THR L:159BINDING SITE FOR RESIDUE CL L 8518
215XC8SOFTWARELYS D:146 , ARG M:37 , LYS M:38 , ASN M:107BINDING SITE FOR RESIDUE CL M 8507
216XC9SOFTWAREHOH 0:5737 , HIS N:40BINDING SITE FOR RESIDUE CD N 8405
217YC1SOFTWAREHOH 0:6506 , ASN N:44 , ARG N:47BINDING SITE FOR RESIDUE CL N 8508
218YC2SOFTWAREASN P:16 , ASP P:20 , GLY P:22 , SER P:24 , SER P:46 , HOH P:1795BINDING SITE FOR RESIDUE NA P 8348
219YC3SOFTWAREHOH 0:3263 , HOH 0:5407 , SER Q:70 , VAL Q:72 , HOH Q:8526BINDING SITE FOR RESIDUE NA Q 8337
220YC4SOFTWAREU 0:2659 , G 0:2660 , VAL Q:72 , TRP Q:75 , HOH Q:8515 , HOH Q:8526BINDING SITE FOR RESIDUE NA Q 8338
221YC5SOFTWARELYS Q:60 , GLN Q:61 , ASN Q:63BINDING SITE FOR RESIDUE NA Q 8386
222YC6SOFTWARELYS Q:118BINDING SITE FOR RESIDUE CL Q 8506
223YC7SOFTWAREHIS R:7 , GLU R:61 , HOH R:8323BINDING SITE FOR RESIDUE NA R 8312
224YC8SOFTWAREGLN S:37 , ARG S:111 , LEU S:112 , SER S:114 , ASP S:117 , HOH S:2868BINDING SITE FOR RESIDUE MG S 8073
225YC9SOFTWARECYS T:6 , CYS T:9 , CYS T:32 , CYS T:36BINDING SITE FOR RESIDUE CD T 8401
226ZC1SOFTWAREHIS X:133 , LYS X:136 , LYS X:137 , VAL X:139 , HOH X:8554 , HOH X:8573 , HOH X:8605BINDING SITE FOR RESIDUE MG X 8109
227ZC2SOFTWAREG 0:1269 , HOH 0:4431 , ARG X:169BINDING SITE FOR RESIDUE CL X 8520
228ZC3SOFTWAREASN A:174 , HOH A:8627 , ARG Y:13 , PHE Y:14 , HOH Y:8421BINDING SITE FOR RESIDUE MG Y 8105
229ZC4SOFTWARECYS Y:39 , CYS Y:42 , CYS Y:57 , CYS Y:60BINDING SITE FOR RESIDUE CD Y 8403
230ZC5SOFTWARECYS Z:19 , CYS Z:22 , CYS Z:34 , CYS Z:37BINDING SITE FOR RESIDUE CD Z 8402
231ZC6SOFTWAREGLY 2:45 , GLY 2:47 , ASP 2:49 , HOH 2:8521 , HOH 2:8561 , HOH 2:8562BINDING SITE FOR RESIDUE MG 2 8078
232ZC7SOFTWARELYS 2:54 , PRO 2:56 , C 3:75 , HOH 3:3276BINDING SITE FOR RESIDUE MG 2 8118
233ZC8SOFTWARECYS 2:11 , CYS 2:14 , CYS 2:71 , CYS 2:74BINDING SITE FOR RESIDUE CD 2 8404
234ZC9SOFTWAREASP 2:66BINDING SITE FOR RESIDUE CL 2 8504

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1QVF)

(-) Cis Peptide Bonds  (6, 6)

Asymmetric/Biological Unit
No.Residues
1Trp A:186 -Pro A:187
2Gly B:14 -Pro B:15
3Asn B:243 -Pro B:244
4Val C:136 -Pro C:137
5Gln F:55 -Pro F:56
6Arg L:184 -Pro L:185

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (2, 2)

Asymmetric/Biological Unit (2, 2)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_RL6_HALMA_001 *R3SRL6_HALMA  ---  ---ER2S
2UniProtVAR_RL6_HALMA_002 *E24SRL6_HALMA  ---  ---EE23S
   * ID not provided by source

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (23, 23)

Asymmetric/Biological Unit (23, 23)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1RIBOSOMAL_L37EPS01077 Ribosomal protein L37e signature.RL37_HALMA5-24  1Z:4-23
2RIBOSOMAL_L19EPS00526 Ribosomal protein L19e signature.RL19E_HALMA7-26  1O:6-25
3RIBOSOMAL_L24EPS01073 Ribosomal protein L24e signature.RL24E_HALMA9-26  1T:8-25
4RIBOSOMAL_L30PS00634 Ribosomal protein L30 signature.RL30_HALMA20-52  1V:20-52
5RIBOSOMAL_L39EPS00051 Ribosomal protein L39e signature.RL39_HALMA29-45  11:28-44
6RIBOSOMAL_L18EPS01106 Ribosomal protein L18e signature.RL18E_HALMA32-49  1N:31-48
7RIBOSOMAL_L21EPS01171 Ribosomal protein L21e signature.RL21_HALMA37-62  1P:36-61
8RIBOSOMAL_L5PS00358 Ribosomal protein L5 signature.RL5_HALMA42-58  1D:41-57
9RIBOSOMAL_L29PS00579 Ribosomal protein L29 signature.RL29_HALMA43-57  1U:42-56
10RIBOSOMAL_L24PS01108 Ribosomal protein L24 signature.RL24_HALMA46-63  1S:45-62
11RIBOSOMAL_L31EPS01144 Ribosomal protein L31e signature.RL31_HALMA49-63  1W:48-62
12RIBOSOMAL_L44EPS01172 Ribosomal protein L44e signature.RL44E_HALMA60-71  12:60-71
13RIBOSOMAL_L23PS00050 Ribosomal protein L23 signature.RL23_HALMA63-78  1R:62-77
14RIBOSOMAL_L7AEPS01082 Ribosomal protein L7Ae signature.RL7A_HALMA68-85  1F:67-84
15RIBOSOMAL_L14PS00049 Ribosomal protein L14 signature.RL14_HALMA71-97  1J:71-97
16RIBOSOMAL_L13PS00783 Ribosomal protein L13 signature.RL13_HALMA83-106  1I:83-106
17RIBOSOMAL_L1EPS00939 Ribosomal protein L1e signature.RL4_HALMA103-129  1C:103-129
18RIBOSOMAL_L15PS00475 Ribosomal protein L15 signature.RL15_HALMA108-138  1K:107-137
19RIBOSOMAL_L22PS00464 Ribosomal protein L22 signature.RL22_HALMA124-148  1Q:123-147
20RIBOSOMAL_L32EPS00580 Ribosomal protein L32e signature.RL32_HALMA129-149  1X:128-148
21RIBOSOMAL_L6_2PS00700 Ribosomal protein L6 signature 2.RL6_HALMA151-172  1E:150-171
22RIBOSOMAL_L2PS00467 Ribosomal protein L2 signature.RL2_HALMA188-199  1A:187-198
23RIBOSOMAL_L3PS00474 Ribosomal protein L3 signature.RL3_HALMA195-218  1B:194-217

(-) Exons   (0, 0)

(no "Exon" information available for 1QVF)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain 0 from PDB  Type:RNA  Length:2754
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
                1qvf 0   10 UAUGCCAGCUGGUGGAUUGCUCGGCUCAGGCGCUGAUGAAGGACGUGCCAAGCUGCGAUAAGCCAUGGGGAGCCGCACGGAGGCGAAGAACCAUGGAUUUCCGAAUGAGAAUCUCUAACAAUUGCUUCGCGCAAUGAGGAACCCCGAGAACUGAAACAUCUCAGUAUCGGGAGGAACAGAAAACGCAAUGUGAUGUCGUUAGUAACCGCGAGUGAACGCGAUACAGCCCAAACCGAAGCCCUCACGGGCAAUGUGGUGUCAGGGCUACCUCUCAUCAGCCGACCGUCUCGACGAAGUCUCUUGGAACAGAGCGUGAUACAGGGUGACAACCCCGUACUCGAGACCAGUACGACGUGCGGUAGUGCCAGAGUAGCGGGGGUUGGAUAUCCCUCGCGAAUAACGCAGGCAUCGACUGCGAAGGCUAAACACAACCUGAGACCGAUAGUGAACAAGUAGUGUGAACGAACGCUGCAAAGUACCCUCAGAAGGGAGGCGAAAUAGAGCAUGAAAUCAGUUGGCGAUCGAGCGACAGGGCAUACAAGGUCCCUCGACGAAUGACCGACGCGCGAGCGUCCAGUAAGACUCACGGGAAGCCGAUGUUCUGUCGUACGUUUUGAAAAACGAGCCAGGGAGUGUGUCUGCAUGGCAAGUCUAACCGGAGUAUCCGGGGAGGCACAGGGAAACCGACAUGGCCGCAGGGCUUGCCCGAGGGCCGCCGUCUUCAAGGGCGGGGAGCCAUGUGGACACGACCCGAAUCCGGACGAUCUACGCAUGGACAAGAUGAAGCGUGCCGAAAGGCACGUGGAAGUCUGUUAGAGUUGGUGUCCUACAAUACCCUCUCGUGAUCUAUGUGUAGGGGUGAAAGGCCCAUCGAGUCCGGCAACAGCUGGUUCCAAUCGAAACAUGUCGAAGCAUGACCUCCGCCGAGGUAGUCUGUGAGGUAGAGCGACCGAUUGGUCCUGUCAAACUCCAAACUUACAGACGCCGUUUGACGCGGGGAUUCCGGUGCGCGGGGUAAGCCUGUGUACCAGGAGGGGAACAACCCAGAGAUAGGUUAAGGUCCCCAAGUGUGGAUUAAGUGUAAUCCUCUGAAGGUGGUCUCGAGCCCUAGACAGCCGGGAGGUGAGCUUAGAAGCAGCUACCCUCUAAGAAAAGCGUAACAGCUUACCGGCCGAGGUUUGAGGCGCCCAAAAUGAUCGGGACUCAAAUCCACCACCGAGACCUGUCCGUACCACUCAUACUGGUAAUCGAGUAGAUUGGCGCUCUAAUUGGAUGGAAGUAGGGGUGAAAACUCCUAUGGACCGAUUAGUGACGAAAAUCCUGGCCAUAGUAGCAGCGAUAGUCGGGUGAGAACCCCGACGGCCUAAUGGAUAAGGGUUCCUCAGCACUGCUGAUCAGCUGAGGGUUAGCCGGUCCUAAGUCAUACCGCAACUCGACUAUGACGAAAUGGGAAACGGGUUAAUAUUCCCGUGCCACUAUGCAGUGAAAGUUGACGCCCUGGGGUCGAUCACGCUGGGCAUCGCCCAGUCGAACCGUCCAACUCCGUGGAAGCCGUAAUGGCAGGAAGCGGACGAACGGCGGCAUAGGGAAACGUGAUUCAACCUGGGGCCCAUGAAAAGACGAGCAUAGUGUCCGUACCGAGAACCGACACAGGUGUCCAUGGCGGCGAAAGCCAAGGCCUGUCGGGAGCAACCAACGUUAGGGAAUUCGGCAAGUUAGUCCCGUACCUUCGGAAGAAGGGAUGCCUGCUCCGGAACGGAGCAGGUCGCAGUGACUCGGAAGCUCGGACUGUCUAGUAACAACAUAGGUGACCGCAAAUCCGCAAGGACUCGUACGGUCACUGAAUCCUGCCCAGUGCAGGUAUCUGAACACCUCGUACAAGAGGACGAAGGACCUGUCAACGGCGGGGGUCUUAAGGUAGCGUAGUACCUUGCCGCAUCAGUAGCGGCUUGCAUGAAUGGAUUAACCAGAGCUUCACUGUCCCAACGUUGGGCCCGGUGAACUGUACAUUCCAGUGCGGAGUCUGGAGACACCCAGGGGGAAGCGAAGACCCUAUGGAGCUUUACUGCAGGCUGUCGCUGAGGACUCUCACUCCGGGAGGAGGACACCGAUAGCCGGGCAGUUUGACUGGGGCGGUACGCGCUCGAAAAGAUAUCGAGCGCGCCCUAUGGCUAUCUCAGCCGGGGACCCGGCGAAGAGUGCAAGAGCAAAAGAUAGCUUGACAGUGUUCUUCCCAACGAGGAACGCUGACGCGAAAGCGUGGUCUAGCGAACCAAUUAGCCUGCUUGAUGCGGGCAAUUGAUGACAGAAAAGCUACCCUAGGGAUAACAGAGUCGUCACUCGCAAGAGCACAUAUCGACCGAGUGGCUUGCUACCUCGAUGUCGGUUCCCUCCAUCCUGCCCGUGCAGAAGCGGGCAAGGGUGAGGUUGUUCGCCUAUUAAAGGAGGUCGUGAGCUGGGUUUAGACCGUCGUGAGACAGGUCGGCUGCUAUCUACUGGGUGUGUAGGUGUCUGACAAGAACGACCGUAUAGUACGAGAGGAACUACGGUUGGUGGCCACUGGUGUACCGGUUGUUCGAGAGAGCACGUGCCGGGUAGCCACGCCACACGGGGUAAGAGCUGAACGCAUCUAAGCUCGAAACCCACUUGGAAAAGAGACACCGCCGAGGUCCCGCGUACAAGACGCGGUCGAUAGACUCGGGGUGUGCGCGUCGAGGUAACGAGACGUUAAGCCCACGAGCACUAACAGACCAA 2914
                                    19        29        39        49        59        69        79        89        99       109       119     ||131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       601       611       621       631       641       651       661       671       681       691       701       711  ||   722       732       742       752       762       772       782       792       802       812       822       832       842       852       862       872       882       892       902       912       922       932       942       952       962      1000      1010      1020      1030      1040      1050      1060      1070      1080      1090      1100      1110      1120      1130      1140      1150      1160      1170      1180      1190      1200      1210      1220      1230      1240      1250      1260      1270      1280      1290      1300      1310      1320      1330      1340      1350      1360      1370      1380      1390      1400      1410      1420      1430      1440      1450      1460      1470      1480      1490      1500      1510      1520      1530      1540      1550      1561      1571      1581      1591      1601      1611      1621      1631      1641      1651      1661      1671      1681      1691      1701      1711      1721      1731      1741      1751      1761      1771      1781      1791      1801      1811      1821      1831      1841      1851      1861      1871      1881      1891      1901      1911      1921      1931      1941      1951|     1973      1983      1993      2003      2013      2023      2033      2043      2053      2063      2073      2083      2093      2103      2113      2123      2133  ||  2243      2253      2263      2273      2283      2293      2303      2313      2323      2333    ||2348      2358      2368      2378      2388      2398      2408      2418      2428      2438      2448      2458      2468      2478      2488      2498      2508      2518      2528      2538      2548      2558      2568      2578      2588      2598      2608      2618      2628      2638      2648      2658     |2670      2680      2690      2700      2710      2720      2730      2740      2750      2760      2770      2780      2790      2800      2810      2820      2830      2840      2850      2860      2870      2880      2890      2900      2910    
                                                                                                                                             125|                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       714|                                                                                                                                                                                                                                                           970|                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            1559|                                                                                                                                                                                                                                                                                                                                                                                                  1951|                                                                                                                                                                        2136|                                                                                                 2338|                                                                                                                                                                                                                                                                                                                            2664|                                                                                                                                                                                                                                                       
                                                                                                                                              128                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        716                                                                                                                                                                                                                                                            999                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             1561                                                                                                                                                                                                                                                                                                                                                                                                   1964                                                                                                                                                                         2237                                                                                                  2344                                                                                                                                                                                                                                                                                                                             2667                                                                                                                                                                                                                                                       

Chain 1 from PDB  Type:PROTEIN  Length:46
 aligned with RL39_HALMA | P22452 from UniProtKB/Swiss-Prot  Length:50

    Alignment length:49
                                    11        21        31        41         
          RL39_HALMA      2 GKKSKATKKRLAKLDNQNSRVPAWVMLKTDREVQRNHKRRHWRRNDTDE   50
               SCOP domains d1qvf1_ 1: Ribosomal protein L3   9e              SCOP domains
               CATH domains 1qvf100 1:1-49                                    CATH domains
               Pfam domains ------Ribosomal_L39-1qvf101 1:7   -49             Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhh....hhhhhhhhh.---............... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------RIBOSOMAL_L39E   ----- PROSITE
                 Transcript ------------------------------------------------- Transcript
                1qvf 1    1 GKKSKATKKRLAKLDNQNSRVPAWVMLKTDE---RNHKRRHWRRNDTDE   49
                                    10        20        30|   |   40         
                                                         31  35              

Chain 2 from PDB  Type:PROTEIN  Length:92
 aligned with RL44E_HALMA | P32411 from UniProtKB/Swiss-Prot  Length:92

    Alignment length:92
                                    10        20        30        40        50        60        70        80        90  
         RL44E_HALMA      1 MQMPRRFNTYCPHCNEHQEHEVEKVRSGRQTGMKWIDRQRERNSGIGNDGKFSKVPGGDKPTKKTDLKYRCGECGKAHLREGWRAGRLEFQE   92
               SCOP domains d1qvf2_ 2: Ribosomal protein L44e                                                            SCOP domains
               CATH domains 1qvf200 2:1-92  [code=3.10.450.80, no name defined]                                          CATH domains
               Pfam domains -------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eee.eeeeee....eeeeeeeee.........hhhhhhhhhhh....hhhhhh............eeeee.....ee..........eee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) -------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) -----------------------------------------------------------RIBOSOMAL_L4--------------------- PROSITE (3)
                 Transcript -------------------------------------------------------------------------------------------- Transcript
                1qvf 2    1 MQMPRRFNTYCPHCNEHQEHEVEKVRSGRQTGMKWIDRQRERNSGIGNDGKFSKVPGGDKPTKKTDLKYRCGECGKAHLREGWRAGRLEFQE   92
                                    10        20        30        40        50        60        70        80        90  

Chain 3 from PDB  Type:RNA  Length:12
                                             
                1qvf 3    1 GCGGUCGCACCA   76
                               ||   74  
                               4|       
                               69       

Chain 9 from PDB  Type:RNA  Length:122
                                                                                                                                                           
                1qvf 9 3001 UUAGGCGGCCACAGCGGUGGGGUUGCCUCCCGUACCCAUCCCGAACACGGAAGAUAAGCCCACCAGCGUUCCGGGGAGUACUGGAGUGCGCGAGCCUCUGGGAAACCCGGUUCGCCGCCACC 3122
                                  3010      3020      3030      3040      3050      3060      3070      3080      3090      3100      3110      3120  

Chain A from PDB  Type:PROTEIN  Length:237
 aligned with RL2_HALMA | P20276 from UniProtKB/Swiss-Prot  Length:240

    Alignment length:237
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       
           RL2_HALMA      2 GRRIQGQRRGRGTSTFRAPSHRYKADLEHRKVEDGDVIAGTVVDIEHDPARSAPVAAVEFEDGDRRLILAPEGVGVGDELQVGVSAEIAPGNTLPLAEIPEGVPVCNVESSPGDGGKFARASGVNAQLLTHDRNVAVVKLPSGEMKRLDPQCRATIGVVAGGGRTDKPFVKAGNKHHKMKARGTKWPNVRGVAMNAVDHPFGGGGRQHPGKPKSISRNAPPGRKVGDIASKRTGRGG  238
               SCOP domains d1qvfa2 A:1-90 N-terminal domain of ribosomal protein L2                                  d1qvfa1 A:91-237 C-terminal domain of ribosomal protein L2                                                                                          SCOP domains
               CATH domains 1qvfA02 A:1-78 Nucleic acid-binding proteins                                  ---1qvfA01 A:82-159  [code=2.30.30.30, no name defined]                          1qvfA03 A:160-237 Ribosomal protein L2, domain 3                               CATH domains
               Pfam domains ---------Ribosomal_L2-1qvfA02 A:10-82                                             -----Ribosomal_L2_C-1qvfA01 A:88-221                                                                                                       ---------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhh.hhhhh...............eeeeeeeee......eeeeeee....eeee..........eee...........eee.hhh....eee...................eeeee.....eeee.....eeee....eeee......hhhhh...hhhhhhhhhh.........hhhhhhhhhh..............ee...........ee......... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RIBOSOMAL_L2--------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1qvf A    1 GRRIQGQRRGRGTSTFRAPSHRYKADLEHRKVEDGDVIAGTVVDIEHDPARSAPVAAVEFEDGDRRLILAPEGVGVGDELQVGVDAEIAPGNTLPLAEIPEGVPVCNVESSPGDGGKFARASGVNAQLLTHDRNVAVVKLPSGEMKRLDPQCRATIGVVGGGGRTDKPFVKAGNKHHKMKARGTKWPNVRGVAMNAVDHPFGGGGRQHPGKPKSISRNAPPGRKVGDIASKRTGRGG  237
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       

Chain B from PDB  Type:PROTEIN  Length:337
 aligned with RL3_HALMA | P20279 from UniProtKB/Swiss-Prot  Length:338

    Alignment length:337
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       
           RL3_HALMA      2 PQPSRPRKGSLGFGPRKRSTSETPRFNSWPSDDGQPGVQGFAGYKAGMTHVVLVNDEPNSPREGMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTLDVPEDHDPDAAEEQIRDAHEAGDLGDLRLITHTVPDAVPSVPKKKPDVMETRVGGGSVSDRLDHALDIVEDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPTVDGGFVNYGEVDGPYTLVKGSVPGPDKRLVRFRPAVRPNDQPRLDPEVRYVSNESNQG  338
               SCOP domains d1qvfb_ B: Ribosomal protein L3                                                                                                                                                                                                                                                                                                                   SCOP domains
               CATH domains 1qvfB03 B:1-38,B:207-257              1qvfB01 B:39-77,B:189-206,B:258-337    1qvfB02 B:78-188  [code=3.30.1430.10, no name defined]                                                         1qvfB01           1qvfB03 B:1-38,B:207-257                           1qvfB01 B:39-77,B:189-206,B:258-337 Translation factors                          CATH domains
               Pfam domains --------------------------------------------Ribosomal_L3-1qvfB01 B:45-312                                                                                                                                                                                                                                               ------------------------- Pfam domains
         Sec.struct. author ....................................ee..eeeeeeeeeeeee..............eeeeeeee...eeeeeeeeeeee..eeeeeeeee......hhhhh.......hhhhhhhhhhhhhhhh.eeeeeeeee.hhhhh.........eeeeeee..hhhhhhhhhhhhhhhh.eehhhhhh....eeeeeee.....eehhhhhhh....hhhhhhh........................ee....eeeeeeeeeeeeeee................eeeeeee.........eeeeee.............eeee....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RIBOSOMAL_L3            ------------------------------------------------------------------------------------------------------------------------ PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1qvf B    1 PQPSRPRKGSLGFGPRKRSTSETPRFNSWPSDDGQPGVQGFAGYKAGMTHVVLVNDEPNSPREGMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTLDVPEDHDPDAAEEQIRDAHEAGDLGDLRLITHTVPDAVPSVPKKKPDVMETRVGGGSVSDRLDHALDIVEDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPTVDGGFVNYGEVDGPYTLVKGSVPGPDKRLVRFRPAVRPNDQPRLDPEVRYVSNESNQG  337
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       

Chain C from PDB  Type:PROTEIN  Length:246
 aligned with RL4_HALMA | P12735 from UniProtKB/Swiss-Prot  Length:246

    Alignment length:246
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240      
           RL4_HALMA      1 MQATIYDLDGNTDGEVDLPDVFETPVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAESFGSGRGQAHVPKQDGRARRVPQAVKGRSAHPPKTEKDRSLDLNDKERQLAVRSALAATADADLVADRGHEFDRDEVPVVVSDDFEDLVKTQEVVSLLEALDVHADIDRADETKIKAGQGSARGRKYRRPASILFVTSDEPSTAARNLAGADVATASEVNTEDLAPGGAPGRLTVFTESALAEVAER  246
               SCOP domains d1qvfc_ C: Ribosomal protein L4                                                                                                                                                                                                                        SCOP domains
               CATH domains 1qvfC00 C:1-246  [code=3.40.1370.10, no name defined]                                                                                                                                                                                                  CATH domains
               Pfam domains ---------------Ribosomal_L4-1qvfC01 C:16-246                                                                                                                                                                                                           Pfam domains
         Sec.struct. author .eeeee.....eeeeee.hhhhhh..hhhhhhhhhhhhhhh..............................ee..ee.........................hhhhhhhhhhhhhhhh.hhhhhhhh..........eee.hhhhhh.hhhhhhhhhhhh.hhhhhhhh...ee..hhhhhhh..ee.....eeee....hhhhhh....eeee....hhhhhhhhhh....eeeehhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------RIBOSOMAL_L1E              --------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                1qvf C    1 MQATIYDLDGNTDGEVDLPDVFETPVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAESFGSGRGQAHVPKLDGRARRVPQAVKGRSAHPPKTEKDRSLDLNDKERQLAVRSALAATADADLVADRGHEFDRDEVPVVVSDDFEDLVKTQEVVSLLEALDVHADIDRADETKIKAGQGSARGRKYRRPASILFVTSDEPSTAARNLAGADVATASEVNTEDLAPGGAPGRLTVFTESALAEVAER  246
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240      

Chain D from PDB  Type:PROTEIN  Length:140
 aligned with RL5_HALMA | P14124 from UniProtKB/Swiss-Prot  Length:177

    Alignment length:165
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170     
           RL5_HALMA     11 FHEMREPRIEKVVVHMGIGHGGRDLANAEDILGEITGQMPVRTKAKRTVGEFDIREGDPIGAKVTLRDEMAEEFLQTALPLAELATSQFDDTGNFSFGVEEHTEFPSQEYDPSIGIYGLDVTVNLVRPGYRVAKRDKASRSIPTKHRLNPADAVAFIESTYDVEV  175
               SCOP domains d1qvfd_ D: Ribosomal      protein L5                                                                                                                                  SCOP domains
               CATH domains 1qvfD00 D:10-174  [c     ode=3.30.1440.10, no name defined]                                                                                                           CATH domains
               Pfam domains -Ribosomal_L5-1qvfD0     1 D:11-64                     ---Ribosomal_L5_C-1qvfD02 D:68-166                                                                    -------- Pfam domains
         Sec.struct. author .......eeeeeeeee....-----..hhhhhhhhhh...ee...................eeeee.hhhhhhhhhhhhhhh............eee.--------------------.eeeeeee..hhhhhh........hhhhh.hhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) --------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) --------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) -------------------------------RIBOSOMAL_L5     --------------------------------------------------------------------------------------------------------------------- PROSITE (4)
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1qvf D   10 FHEMREPRIEKVVVHMGIGH-----ANAEDILGEITGQMPVRTKAKRTVGEFDIREGDPIGAKVTLRDEMAEEFLQTALPLAELATSQFDDTGNFSFG--------------------LDVTVNLVRPGYRVAKRDKASRSIPTKHRLNPADAVAFIESTYDVEV  174
                                    19        29     |  39        49        59        69        79        89        99       | -         -       129       139       149       159       169     
                                              29    35                                                                     107                  128                                              

Chain E from PDB  Type:PROTEIN  Length:172
 aligned with RL6_HALMA | P14135 from UniProtKB/Swiss-Prot  Length:178

    Alignment length:172
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171  
           RL6_HALMA      2 PRVELEIPEDVDAEQDHLDITVEGDNGSVTRRLWYPDIDVSVDGDTVVIESDEDNAKTMSTIGTFQSHIENMFHGVTEGWEYGMEVFYSHFPMQVNVEGDEVVIENFLGEKAPRRTTIHGDTDVEIDGEELTVSGPDIEAVGQTAADIEQLTRINDKDVRVFQDGVYITRKP  173
               SCOP domains d1qvfe1 E:1-79 Ribosomal protein L6                                            d1qvfe2 E:80-172 Ribosomal protein L6                                                         SCOP domains
               CATH domains 1qvfE02 E:1-79  [code=3.90.930.12, no name defined]                            1qvfE01 E:80-172  [code=3.90.930.12, no name defined]                                         CATH domains
           Pfam domains (1) ------------------------------------------------------------------------------------------Ribosomal_L6-1qvfE01 E:91-165                                              ------- Pfam domains (1)
           Pfam domains (2) ------------------------------------------------------------------------------------------Ribosomal_L6-1qvfE02 E:91-165                                              ------- Pfam domains (2)
         Sec.struct. author .eeeee.....eeeee..eeeeee..eeeeee.....eeeeee..eeeeee...hhhhhhhhhhhhhhhhhhhhhhh..eeeeeeee......eeee...eeeeehhhhh...eeee.....eeeee..eeeeee.hhhhhhhhhhhhhhh.............eeeeee.. Sec.struct. author
                 SAPs(SNPs) -S--------------------S----------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------RIBOSOMAL_L6_2        - PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1qvf E    1 PRVELEIPEDVDAEQDHLDITVEGDNGSVTRRLWYPDIDVSVDGDTVVIESDEDNAKTMSTIGTFQSHIENMFHGVTEGWEYGMEVFYSHFPMQVNVEGDEVVIENFLGEKAPRRTTIHGDTDVEIDGEELTVSGPDIEAVGQTAADIEQLTRINDKDVRVFQDGVYITRKP  172
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170  

Chain F from PDB  Type:PROTEIN  Length:119
 aligned with RL7A_HALMA | P12743 from UniProtKB/Swiss-Prot  Length:120

    Alignment length:119
                                    11        21        31        41        51        61        71        81        91       101       111         
          RL7A_HALMA      2 PVYVDFDVPADLEDDALEALEVARDTGAVKKGTNETTKSIERGSAELVFVAEDVQPEEIVMHIPELADEKGVPFIFVEQQDDLGHAAGLEVGSAAAAVTDAGEADADVEDIADKVEELR  120
               SCOP domains d1qvff_ F: Ribosomal protein L7ae                                                                                       SCOP domains
               CATH domains 1qvfF00 F:1-119  [code=3.30.1330.30, no name defined]                                                                   CATH domains
               Pfam domains -------------Ribosomal_L7Ae-1qvfF01 F:14-108                                                                ----------- Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhhhhhhhh.eeehhhhhhhhhhhh....eeee....hhhhh.hhhhhhhh....eeee.hhhhhhhhh.......eeee.....hhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------RIBOSOMAL_L7AE    ----------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------- Transcript
                1qvf F    1 PVYVDFDVPADLEDDALEALEVARDTGAVKKGTNETTKSIERGSAELVFVAEDVQPEEIVMHIPELADEKGVPFIFVEQQDDLGHAAGLEVGSAAAAVTDAGAAATVLEEIADKVEELR  119
                                    10        20        30        40        50        60        70        80        90       100       110         

Chain G from PDB  Type:PROTEIN  Length:29
 aligned with RL10_HALMA | P15825 from UniProtKB/Swiss-Prot  Length:348

    Alignment length:62
                                    21        31        41        51        61        71  
          RL10_HALMA     12 IPEWKQEEVDAIVEMIESYESVGVVNIAGIPSRQLQDMRRDLHGTAELRVSRNTLLERALDD   73
               SCOP domains d1qvfg_ G:                                                     SCOP domains
               CATH domains 1qvfG00 G:12-73                                                CATH domains
               Pfam domains -------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhh---------------------------------hhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------- Transcript
                1qvf G   12 IPEWKQEEVDAIVEMIES---------------------------------RNTLLERALDD   73
                                    21       | -         -         -         - |      71  
                                            29                                63          

Chain H from PDB  Type:PROTEIN  Length:156
                                                                                                                                                                                             
               SCOP domains d1qvfh_ H: Ribosomal protein L10e                                                                                                                            SCOP domains
               CATH domains 1qvfH00 H:1-167  [code=3.90.1170.10, no name defined]                                                                                                        CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhh.........................eee.........eeeeeee...eeeehhhhhhhhhhhhh...........eeee.....eeeee..........eeeeeeeee....eeeeeee....hhhhhhhh........eeeee...... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                1qvf H    1 KPGAMYRNSSKPAYTRREYISGIPGKKIAQFDMGNNGAGPTYPAQVELVVEKPVQIRHNALEAARVAANRYVQNSGAAANYKFRIRKFPFHVIRENKDGMRAPFGKPVGTAARVHGANHIFIAWVNPDPNVEEAWRRAKMKVTPTINIDSSPAGNA  167
                                    10        20        30        40        50        60        70        80        90      |111       121       131       141       151       161      
                                                                                                                           97|                                                          
                                                                                                                           109                                                          

Chain I from PDB  Type:PROTEIN  Length:142
 aligned with RL13_HALMA | P29198 from UniProtKB/Swiss-Prot  Length:145

    Alignment length:142
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143  
          RL13_HALMA      4 AEFDADVIVDARDCIMGRVASQVAEQALDGETVAVVNAERAVITGREEQIVEKYEKRVDIGNDNGYFYPKRPDGIFKRTIRGMLPHKKQRGREAFESVRVYLGNPYDEDGEVLDGTSLDRLSNIKFVTLGEISETLGANKTW  145
               SCOP domains d1qvfi_ I: Ribosomal protein L13                                                                                                               SCOP domains
               CATH domains 1qvfI00 I:4-145  [code=3.90.1180.10, no name defined]                                                                                          CATH domains
               Pfam domains -----Ribosomal_L13-1qvfI01 I:9-117                                                                                ---------------------------- Pfam domains
         Sec.struct. author ......eeee....hhhhhhhhhhhhhh....eeeehhhh.eee.hhhhhhhhhhhhhhh..........hhhhhhhhhhhh.....hhhhhhhhhheee..................hhhhh..eeehhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ---------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) -------------------------------------------------------------------------------RIBOSOMAL_L13           --------------------------------------- PROSITE (3)
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1qvf I    4 AEFDADVIVDARDCIMGRVASQVAEQALDGETVAVVNAERAVITGREEQIVEKYEKRVDIGNDNGYFYPKRPDGIFKRTIRGMLPHKKQRGREAFESVRVYLGNPYDEDGEVLDGTSLDRLSNIKFVTLGEISETLGANKTW  145
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143  

Chain J from PDB  Type:PROTEIN  Length:132
 aligned with RL14_HALMA | P22450 from UniProtKB/Swiss-Prot  Length:132

    Alignment length:132
                                    10        20        30        40        50        60        70        80        90       100       110       120       130  
          RL14_HALMA      1 MEALGADVTQGLEKGSLITCADNTGARELKVISVHGYSGTKNRHPKAGLGDKITVSVTKGTPEMRRQVLEAVVVRQRKPIRRPDGTRVKFEDNAAVIVDENEDPRGTELKGPIAREVAQRFGSVASAATMIV  132
               SCOP domains d1qvfj_ J: Ribosomal protein L14                                                                                                     SCOP domains
               CATH domains 1qvfJ00 J:1-132 Ribosomal Protein L14;                                                                                               CATH domains
               Pfam domains ----------Ribosomal_L14-1qvfJ01 J:11-132                                                                                             Pfam domains
         Sec.struct. author ......ee...ee...eeee.....eeeeeeeee...........ee....eeeeeeeee.......eeeeeeee....ee.....eeee...eeeee..............ee.hhh..hhhhhh....ee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------RIBOSOMAL_L14  PDB: J:71-97----------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------ Transcript
                1qvf J    1 MEALGADVTQGLEKGSLITCADNTGARELKVISVHGYSGTKNRHPKAGLGDKITVSVTKGTPEMRRQVLEAVVVRQRKPIRRPDGTRVKFEDNAAVIVDENEDPRGTELKGPIAREVAQRFGSVASAATMIV  132
                                    10        20        30        40        50        60        70        80        90       100       110       120       130  

Chain K from PDB  Type:PROTEIN  Length:145
 aligned with RL15_HALMA | P12737 from UniProtKB/Swiss-Prot  Length:165

    Alignment length:150
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151
          RL15_HALMA      2 TSKKKRQRGSRTHGGGSHKNRRGAGHRGGRGDAGRDKHEFHNHEPLGKSGFKRPQKVQEEAATIDVREIDENVTLLAADDVAEVEDGGFRVDVRDVVEEADDADYVKVLGAGQVRHELTLIADDFSEGAREKVEGAGGSVELTDLGEERQ  151
               SCOP domains d1qvfk_ K: Ribosomal protein L15 (L15p)                                                                                                                SCOP domains
               CATH domains 1qvfK01 K:1-50                                    1qvfK02 K:51-149  [code=3.100.10.     10, no name defined]                                         - CATH domains
               Pfam domains ---------------Ribosomal_L18e-1qvfK01 K:16-143                                                                                                 ------- Pfam domains
         Sec.struct. author .hhhhhh...............hhhhhh.........................hhhhh..eeeeehhhhhhh...........-----.eeehhhhh.......eeeee.........eeee.eehhhhhhhhhhh..eeee........ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------------------------------------------RIBOSOMAL_L15  PDB: K:107-137  ------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                1qvf K    1 TSKKKRQRGSRTHGGGSHKNRRGAGHRGGRGDAGRDKHEFHNHEPLGKSGFKRPQKVQEEAATIDVREIDENVTLLAADDVAE-----FRVDVRDVVEEADDADYVKVLGAGQVRHELTLIADDFSEGAREKVEGAGGSVELTDLGEERQ  150
                                    10        20        30        40        50        60        70        80  |     90       100       110       120       130       140       150
                                                                                                             83    89                                                             

Chain L from PDB  Type:PROTEIN  Length:194
                                                                                                                                                                                                                                   
               SCOP domains d1qvfl_ L: Ribosomal protein L15e                                                                                                                                                                  SCOP domains
               CATH domains 1qvfL00 L:1-194 Ribosomal protein l15e                                                                                                                                                             CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhh...hhhhhhhhhhhhhhhh....eee.....hhhhhhhhh......eeeeeeeee.............hhhhh.........hhhhhhhhhhhhhh...eeeeeeeeee...eeeeeeeee............hhhhhhhhhh.hhhhh.hhhhhhhh...............hhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1qvf L    1 ARSAYSYIREAWKRPKEGQIAELMWHRMQEWRNEPAVVRIERPTRLDRARSLGYKAKQGIIVVRVAIRKGSSRRTRFNKGRRSKRMMVNRITRKKNIQRIAEERANRKFPNLRVLNSYSVGEDGRHKWHEVILIDPDHPAIKSDDQLSWISRTRHRLRTFRGLTSAGRRCRGLRGQGKGSEKVRPSLRVNGAKA  194
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190    

Chain M from PDB  Type:PROTEIN  Length:186
 aligned with RL18_HALMA | P14123 from UniProtKB/Swiss-Prot  Length:187

    Alignment length:186
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181      
          RL18_HALMA      2 ATGPRYKVPMRRRREARTDYHQRLRLLKSGKPRLVARKSNKHVRAQLVTLGPNGDDTLASAHSSDLAEYGWEAPTGNMPSAYLTGLLAGLRAQEAGVEEAVLDIGLNSPTPGSKVFAIQEGAIDAGLDIPHNDDVLADWQRTRGAHIAEYDEQLEEPLYSGDFDAADLPEHFDELRETLLDGDIEL  187
               SCOP domains d1qvfm_ M: Ribosomal protein L18 (L18p)                                                                                                                                                    SCOP domains
               CATH domains 1qvfM00 M:1-186  [code=3.30.420.100, no name defined]                                                                                                                                      CATH domains
               Pfam domains --------Ribosomal_L18p-1qvfM01 M:9-129                                                                                           --------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhh...hhhhhhhhhhh...eeeeee....eeeeeee......eeeeeee.hhhhhhh......hhhhhhhhhhhhhhhhhhh.....eee.........hhhhhhhhhhhhhh.....hhhhh..hhhhhhhhhhhhhhh..............hhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                1qvf M    1 ATGPRYKVPMRRRREARTDYHQRLRLLKSGKPRLVARKSNKHVRAQLVTLGPNGDDTLASAHSSDLAEYGWEAPTGNMPSAYLTGLLAGLRAQEAGVEEAVLDIGLNSPTPGSKVFAIQEGAIDAGLDIPHNDDVLADWQRTRGAHIAEYDEQLEEPLYSGDFDAADLPEHFDELRETLLDGDIEL  186
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180      

Chain N from PDB  Type:PROTEIN  Length:115
 aligned with RL18E_HALMA | P12733 from UniProtKB/Swiss-Prot  Length:116

    Alignment length:115
                                    11        21        31        41        51        61        71        81        91       101       111     
         RL18E_HALMA      2 SKTNPRLSSLIADLKSAARSSGGAVWGDVAERLEKPRRTHAEVNLGRIERYAQEDETVVVPGKVLGSGVLQKDVTVAAVDFSGTAETKIDQVGEAVSLEQAIENNPEGSHVRVIR  116
               SCOP domains d1qvfn_ N: Ribosomal protein L18e                                                                                   SCOP domains
               CATH domains 1qvfN00 N:1-115  [code=3.100.10.10, no name defined]                                                                CATH domains
               Pfam domains ---------------------Ribosomal_L18e-1qvfN01 N:22-99                                                ---------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhheeeehhhhhhhh....eeeeeeeee.........eeeeeeehhhhhhhhhhhheeeehhhhhhhh.....eee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ------------------------------RIBOSOMAL_L18E    ------------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------- Transcript
                1qvf N    1 SKTNPRLSSLIADLKSAARSSGGAVWGDVAERLEKPRRTHAEVNLGRIERYAQEDETVVVPGKVLGSGVLQKDVTVAAVDFSGTAETKIDQVGEAVSLEQAIENNPEGSHVRVIR  115
                                    10        20        30        40        50        60        70        80        90       100       110     

Chain O from PDB  Type:PROTEIN  Length:143
 aligned with RL19E_HALMA | P14119 from UniProtKB/Swiss-Prot  Length:149

    Alignment length:143
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141   
         RL19E_HALMA      2 TDLSAQKRLAADVLDVGKNRVWFNPERQGDIADAITREDVRELVDEGAIQAKDKKGNSRGRARERQKKRAYGHQKGAGSRKGKAGARQNSKEDWESRIRAQRTKLRELRDEGTLSSSQYRDLYDKAGGGEFDSVADLERYIDA  144
               SCOP domains d1qvfo_ O: Ribosomal protein L19 (L19e)                                                                                                         SCOP domains
               CATH domains 1qvfO01 O:1-55  [code=1.10.1650.10, no name defined]   1qvfO03 O:56-88 Single Heli x bin1qvfO02 O:89-143  [code=1.10.1200.60, no name defined]  CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhh..hhh.eee...hhhhhhh..hhhhhhhhhhh..eee.......hhhhhhhhhhhhh....hhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhh.....hhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) -----RIBOSOMAL_L19E      ---------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1qvf O    1 TDLSAQKRLAADVLDVGKNRVWFNPERQGDIADAITREDVRELVDEGAIQAKDKKGNSRGRARERQKKRAKGHQKGAGSRKGKAGARQNSKEDWESRIRAQRTKLRELRDEGTLSSSQYRDLYDKAGGGEFDSVADLERYIDA  143
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140   

Chain P from PDB  Type:PROTEIN  Length:95
 aligned with RL21_HALMA | P12734 from UniProtKB/Swiss-Prot  Length:96

    Alignment length:95
                                    11        21        31        41        51        61        71        81        91     
          RL21_HALMA      2 PSSNGPLEGTRGKLKNKPRDRGTSPPQRAVEEFDDGEKVHLKIDPSVPNGRFHPRFDGQTGTVEGKQGDAYKVDIVDGGKEKTIIVTAAHLRRQE   96
               SCOP domains d1qvfp_ P: Ribosomal proteins L21e                                                              SCOP domains
               CATH domains 1qvfP00 P:1-95 Myosin S1 fragment SH3-like barrel                                               CATH domains
               Pfam domains Ribosomal_L21e-1qvfP01 P:1-95                                                                   Pfam domains
         Sec.struct. author ................hhhhh...hhhhhh.......eeee...........hhhhh..eeeeeeee..eeeeeeee..eeeeeeehhh.eee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) -----------------------------------RIBOSOMAL_L21E            ---------------------------------- PROSITE (3)
                 Transcript ----------------------------------------------------------------------------------------------- Transcript
                1qvf P    1 PSSNGPLEGTRGKLKNKPRDRGTSPPQRAVEEFDDGEKVHLKIDPSVPNGRFHPRFDGQTGTVEGKQGDAYKVDIVDGGKEKTIIVTAAHLRRQE   95
                                    10        20        30        40        50        60        70        80        90     

Chain Q from PDB  Type:PROTEIN  Length:150
 aligned with RL22_HALMA | P10970 from UniProtKB/Swiss-Prot  Length:155

    Alignment length:150
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151
          RL22_HALMA      2 GISYSVEADPDTTAKAMLRERQMSFKHSKAIAREIKGKTAGEAVDYLEAVIEGDQPVPFKQHNSGVGHKSKVDGWDAGRYPEKASKAFLDLLENAVGNADHQGFDGEAMTIKHVAAHKVGEQQGRKPRAMGRASAWNSPQVDVELILEEP  151
               SCOP domains d1qvfq_ Q: Ribosomal protein L22                                                                                                                       SCOP domains
               CATH domains 1qvfQ00 Q:1-150 Ribosomal Protein L22; Chain A                                                                                                         CATH domains
               Pfam domains ---------------Ribosomal_L22-1qvfQ01 Q:16-149                                                                                                        - Pfam domains
         Sec.struct. author ............eeeeeeeee..hhhhhhhhhhhhh..hhhhhhhhhhhhhhh...ee...................ee.hhhhhhhhhhhhhhhhhhhhh...hhhhheeeeeeeeeeeee..eee.hhh.eee..eeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE (2)
                PROSITE (3) --------------------------------------------------------------------------------------------------------------------------RIBOSOMAL_L22            --- PROSITE (3)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                1qvf Q    1 GISYSVEADPDTTAKAMLRERQMSFKHSKAIAREIKGKTAGEAVDYLEAVIEGDQPVPFKQHNSGVGHKSKVDGWDAGRYPEKASKAFLDLLENAVGNADHQGFDGEAMTIKHVAAHKVGEQQGRKPRAMGRASAWNSPQVDVELILEEP  150
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150

Chain R from PDB  Type:PROTEIN  Length:81
 aligned with RL23_HALMA | P12732 from UniProtKB/Swiss-Prot  Length:85

    Alignment length:81
                                    11        21        31        41        51        61        71        81 
          RL23_HALMA      2 SWDVIKHPHVTEKAMNDMDFQNKLQFAVDDRASKGEVADAVEEQYDVTVEQVNTQNTMDGEKKAVVRLSEDDDAQEVASRI   82
               SCOP domains d1qvfr_ R: Ribosomal protein L23                                                  SCOP domains
               CATH domains 1qvfR00 R:1-81  [code=3.30.70.330, no name defined]                               CATH domains
               Pfam domains -Ribosomal_L23-1qvfR01 R:2-81                                                     Pfam domains
         Sec.struct. author ....eeee..hhhhhhhhhhhheeeeee....hhhhhhhhhhhhhh..eeeeeeee.....eeeeeee....hhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) --------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) --------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) -------------------------------------------------------------RIBOSOMAL_L23   ---- PROSITE (4)
                 Transcript --------------------------------------------------------------------------------- Transcript
                1qvf R    1 SWDVIKHPHVTEKAMNDMDFQNKLQFAVDDRASKGEVADAVEEQYDVTVEQVNTQNTMDGEKKAVVRLSEDDDAQEVASRI   81
                                    10        20        30        40        50        60        70        80 

Chain S from PDB  Type:PROTEIN  Length:119
 aligned with RL24_HALMA | P10972 from UniProtKB/Swiss-Prot  Length:120

    Alignment length:119
                                    11        21        31        41        51        61        71        81        91       101       111         
          RL24_HALMA      2 SKQPDKQRKSQRRAPLHERHKQVRATLSADLREEYGQRNVRVNAGDTVEVLRGDFAGEEGEVINVDLDKAVIHVEDVTLEKTDGEEVPRPLDTSNVRVTDLDLEDEKREARLESEDDSA  120
               SCOP domains d1qvfs_ S: Ribosomal proteins L24 (L24p)                                                                                SCOP domains
               CATH domains 1qvfS00 S:1-119  [code=2.30.30.30, no name defined]                                                                     CATH domains
               Pfam domains -------------------------------------------KOW-1qvfS01 S:44-75             -------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhh.eeeehhhhhhhhh..eee.....eeee........eeeeeeee....eeee...eee.....eee...hhh.eeeee....hhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------RIBOSOMAL_L24     --------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------- Transcript
                1qvf S    1 SKQPDKQRKSQRRAPLHERHKQVRATLSADLREEYGQRNVRVNAGDTVEVLRGDFAGEEGEVINVDLDKAVIHVEDVTLEKTDGEEVPRPLDTSNVRVTDLDLEDEKREARLESEDDSA  119
                                    10        20        30        40        50        60        70        80        90       100       110         

Chain T from PDB  Type:PROTEIN  Length:53
 aligned with RL24E_HALMA | P14116 from UniProtKB/Swiss-Prot  Length:67

    Alignment length:53
                                    14        24        34        44        54   
         RL24E_HALMA      5 RECDYCGTDIEPGTGTMFVHKDGATTHFCSSKCENNADLGREARNLEWTDTAR   57
               SCOP domains d1qvft_ T: Ribosomal protein L24e                     SCOP domains
               CATH domains 1qvfT00 T:4-56  [code=2.30.170.20, no name defined]   CATH domains
               Pfam domains Ribosomal_L24e-1qvfT01 T:4-56                         Pfam domains
         Sec.struct. author ...............eeee.....eeee.hhhhhhhhhh..hhhhh....... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------- PROSITE (2)
                PROSITE (3) ----RIBOSOMAL_L24E    ------------------------------- PROSITE (3)
                 Transcript ----------------------------------------------------- Transcript
                1qvf T    4 RECDYCGTDIEPGTGTMFVHKDGATTHFCSSKCENNADLGREARNLEWTDTAR   56
                                    13        23        33        43        53   

Chain U from PDB  Type:PROTEIN  Length:65
 aligned with RL29_HALMA | P10971 from UniProtKB/Swiss-Prot  Length:71

    Alignment length:65
                                    11        21        31        41        51        61     
          RL29_HALMA      2 TVLHVQEIRDMTPAEREAELDDLKTELLNARAVQAAGGAPENPGRIKELRKAIARIKTIQGEEGD   66
               SCOP domains d1qvfu_ U: Ribosomal protein L29 (L29p)                           SCOP domains
               CATH domains 1qvfU00 U:1-65  [code=1.10.287.310, no name defined]              CATH domains
               Pfam domains ----Ribosomal_L29-1qvfU01 U:5-63                               -- Pfam domains
         Sec.struct. author ...hhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ----------------------------------------------------------------- PROSITE (3)
                PROSITE (4) ----------------------------------------------------------------- PROSITE (4)
                PROSITE (5) -----------------------------------------RIBOSOMAL_L29  --------- PROSITE (5)
                 Transcript ----------------------------------------------------------------- Transcript
                1qvf U    1 TVLHVQEIRDMTPAEREAELDDLKTELLNARAVQAAGGAPENPGRIKELRKAIARIKTIQGEEGD   65
                                    10        20        30        40        50        60     

Chain V from PDB  Type:PROTEIN  Length:154
 aligned with RL30_HALMA | P14121 from UniProtKB/Swiss-Prot  Length:154

    Alignment length:154
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150    
          RL30_HALMA      1 MHALVQLRGEVNMHTDIQDTLEMLNIHHVNHCTLVPETDAYRGMVAKVNDFVAFGEPSQETLETVLATRAEPLEGDADVDDEWVAEHTDYDDISGLAFALLSEETTLREQGLSPTLRLHPPRGGHDGVKHPVKEGGQLGKHDTEGIDDLLEAMR  154
               SCOP domains d1qvfv_ V: Archaeal L30 (L30a)                                                                                                                             SCOP domains
               CATH domains 1qvfV01 V:1-57,V:114-154                                 1qvfV02 V:58-113  [code=1.10.15.30, no name defined]    1qvfV01 V:1-57,V:114-154                  CATH domains
               Pfam domains Ribosomal_L30-1qvfV01 V:1-52                        ------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeee.......hhhhhhhhhhh......eeeee..hhhhhhhhhhh...eeee..hhhhhhhhhhhhh.........hhhhhhhhh...hhhhhhhhhhh.............ee.............hhhhh...ee.hhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ---------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ---------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) -------------------RIBOSOMAL_L30  PDB: V:20-52      ------------------------------------------------------------------------------------------------------ PROSITE (4)
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1qvf V    1 MHALVQLRGEVNMHTDIQDTLEMLNIHHVNHCTLVPETDAYRGMVAKVNDFVAFGEPSQETLETVLATRAEPLEGDADVDDEWVAEHTDYDDISGLAFALLSEETTLREQGLSPTLRLHPPRGGHDGVKHPVKEGGQLGKHDTEGIDDLLEAMR  154
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150    

Chain W from PDB  Type:PROTEIN  Length:82
 aligned with RL31_HALMA | P18138 from UniProtKB/Swiss-Prot  Length:92

    Alignment length:82
                                    17        27        37        47        57        67        77        87  
          RL31_HALMA      8 ERVVTIPLRDARAEPNHKRADKAMILIREHLAKHFSVDEDAVRLDPSINEAAWARGRANTPSKIRVRAARFEEEGEAIVEAE   89
               SCOP domains d1qvfw_ W: Ribosomal protein L31e                                                  SCOP domains
               CATH domains 1qvfW00 W:7-88  [code=3.10.440.10, no name defined]                                CATH domains
               Pfam domains Ribosomal_L31e-1qvfW01 W:7-87                                                    - Pfam domains
         Sec.struct. author .eeeeee.hhhhhhhhhhhhhhhhhhhhhhhhhhh......eeehhhhhhhhh.........eeeeeeeee....eeeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) -----------------------------------------RIBOSOMAL_L31E -------------------------- PROSITE (2)
                 Transcript ---------------------------------------------------------------------------------- Transcript
                1qvf W    7 ERVVTIPLRDARAEPNHKRADKAMILIREHLAKHFSVDEDAVRLDPSINEAAWARGRANTPSKIRVRAARFEEEGEAIVEAE   88
                                    16        26        36        46        56        66        76        86  

Chain X from PDB  Type:PROTEIN  Length:142
 aligned with RL32_HALMA | P12736 from UniProtKB/Swiss-Prot  Length:241

    Alignment length:142
                                   105       115       125       135       145       155       165       175       185       195       205       215       225       235  
          RL32_HALMA     96 TELQARGLTEKTPDLSDEDARLLTQRHRVGKPQFNRQDHHKKKRVSTSWRKPRGQLSKQRRGIKGKGDTVEAGFRSPTAVRGKHPSGFEEVRVHNVDDLEGVDGDTEAVRIASKVGARKRERIEEEAEDAGIRVLNPTYVEV  237
               SCOP domains d1qvfx_ X: Ribosomal protein L32e                                                                                                              SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -----------------------------Ribosomal_L32e-1qvfX01 X:124-231                                                                            ----- Pfam domains
         Sec.struct. author .eeee..........hhhhhhhhhhhhhhh........................................hhhhh.............eeeee..hhhhh......eeeee....hhhhhhhhhhhhhhh........eeee Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ---------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ---------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) ---------------------------------RIBOSOMAL_L32E       ---------------------------------------------------------------------------------------- PROSITE (4)
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1qvf X   95 TELQARGLTEKTPDLSDEDARLLTQRHRVGKPQFNRQDHHKKKRVSTSWRKPRGQLSKQRRGIKGKGDTVEAGFRSPTAVRGKHPSGFEEVRVHNVDDLEGVDGDTEAVRIASKVGARKRERIEEEAEDAGIRVLNPTYVEV  236
                                   104       114       124       134       144       154       164       174       184       194       204       214       224       234  

Chain Y from PDB  Type:PROTEIN  Length:73
                                                                                                          
               SCOP domains d1qvfy_ Y: Ribosomal protein L37ae                                        SCOP domains
               CATH domains 1qvfY00 Y:10-82  [code=2.20.25.30, no name defined]                       CATH domains
               Pfam domains ------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhh...hhhhhhhhhhhhhhhhh...........eeeee..eeee.....eee.......hhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------- Transcript
                1qvf Y   10 RTGRFGPRYGLKIRVRVADVEIKHKKKHKCPVCGFKKLKRAGTGIWMCGHCGYKIAGGCYQPETVAGKAVMKA   82
                                    19        29        39        49        59        69        79   

Chain Z from PDB  Type:PROTEIN  Length:56
 aligned with RL37_HALMA | P32410 from UniProtKB/Swiss-Prot  Length:57

    Alignment length:56
                                    11        21        31        41        51      
          RL37_HALMA      2 TGAGTPSQGKKNTTTHTKCRRCGEKSYHTKKKVCSSCGFGKSAKRRDYEWQSKAGE   57
               SCOP domains d1qvfz_ Z: Ribosomal protein L37e                        SCOP domains
               CATH domains 1qvfZ00 Z:1-56  [code=2.20.25.30, no name defined]       CATH domains
               Pfam domains -Ribosomal_L37e-1qvfZ01 Z:2-56                           Pfam domains
         Sec.struct. author ...hhhhhh......eee......eeee....ee.............hhhhh.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---RIBOSOMAL_L37E      --------------------------------- PROSITE
                 Transcript -------------------------------------------------------- Transcript
                1qvf Z    1 TGAGTPSQGKKNTTTHTKCRRCGEKSYHTKKKVCSSCGFGKSAKRRDYEWQSKAGE   56
                                    10        20        30        40        50      

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (29, 30)

Asymmetric/Biological Unit
(-)
Fold: RL5-like (90)
(-)
Class: Peptides (792)

(-) CATH Domains  (32, 36)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (23, 25)

Asymmetric/Biological Unit
(-)
Clan: KOW (56)
(-)
Clan: OB (224)
(-)
Clan: RRM (206)
(-)
Clan: Ribo_L29 (45)
(-)
Clan: S11_L18p (67)
(-)
Clan: TRASH (61)

(-) Gene Ontology  (23, 225)

Asymmetric/Biological Unit(hide GO term definitions)
Chain 1   (RL39_HALMA | P22452)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain 2   (RL44E_HALMA | P32411)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0070180    large ribosomal subunit rRNA binding    Interacting selectively and non-covalently with the large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
    GO:0000049    tRNA binding    Interacting selectively and non-covalently with transfer RNA.
    GO:0008270    zinc ion binding    Interacting selectively and non-covalently with zinc (Zn) ions.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain A   (RL2_HALMA | P20276)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0015934    large ribosomal subunit    The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site).
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain B   (RL3_HALMA | P20279)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain C   (RL4_HALMA | P12735)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain D   (RL5_HALMA | P14124)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
    GO:0000049    tRNA binding    Interacting selectively and non-covalently with transfer RNA.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain E   (RL6_HALMA | P14135)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain F   (RL7A_HALMA | P12743)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0004526    ribonuclease P activity    Catalysis of the endonucleolytic cleavage of RNA, removing 5' extra nucleotides from tRNA precursor.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0090501    RNA phosphodiester bond hydrolysis    The RNA metabolic process in which the phosphodiester bonds between ribonucleotides are cleaved by hydrolysis.
    GO:0090502    RNA phosphodiester bond hydrolysis, endonucleolytic    The chemical reactions and pathways involving the hydrolysis of internal 3',5'-phosphodiester bonds in one or two strands of ribonucleotides.
    GO:0042254    ribosome biogenesis    A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits; includes transport to the sites of protein synthesis.
    GO:0001682    tRNA 5'-leader removal    Generation of the mature 5'-end of the tRNA, usually via an endonucleolytic cleavage by RNase P.
    GO:0008033    tRNA processing    The process in which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group.
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain G   (RL10_HALMA | P15825)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0070180    large ribosomal subunit rRNA binding    Interacting selectively and non-covalently with the large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
biological process
    GO:0042254    ribosome biogenesis    A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits; includes transport to the sites of protein synthesis.
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain I   (RL13_HALMA | P29198)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0015934    large ribosomal subunit    The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site).
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain J   (RL14_HALMA | P22450)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain K   (RL15_HALMA | P12737)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0015934    large ribosomal subunit    The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site).
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain M   (RL18_HALMA | P14123)
molecular function
    GO:0008097    5S rRNA binding    Interacting selectively and non-covalently with 5S ribosomal RNA, the smallest RNA constituent of a ribosome.
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain N   (RL18E_HALMA | P12733)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain O   (RL19E_HALMA | P14119)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0070180    large ribosomal subunit rRNA binding    Interacting selectively and non-covalently with the large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain P   (RL21_HALMA | P12734)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain Q   (RL22_HALMA | P10970)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0015934    large ribosomal subunit    The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site).
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain R   (RL23_HALMA | P12732)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component</