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(-) Description

Title :  CO-CRYSTAL STRUCTURE OF CCA-PHE-CAPROIC ACID-BIOTIN AND SPARSOMYCIN BOUND TO THE 50S RIBOSOMAL SUBUNIT
 
Authors :  J. L. Hansen, T. M. Schmeing, P. B. Moore, T. A. Steitz
Date :  26 Jul 02  (Deposition) - 06 Sep 02  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.80
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,1,2,3,4,5
Keywords :  P-Site, Sparsomycin, Ribosome (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  J. L. Hansen, T. M. Schmeing, P. B. Moore, T. A. Steitz
Structural Insights Into Peptide Bond Formation.
Proc. Natl. Acad. Sci. Usa V. 99 11670 2002
PubMed-ID: 12185246  |  Reference-DOI: 10.1073/PNAS.172404099
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - 23S RRNA
    ChainsA
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 2 - 5S RRNA
    ChainsB
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 3 - CCA
    Chains5
    EngineeredYES
    Other DetailsCCA OF RNA LINKED TO PHE-CAPROIC ACID BIOTIN THROUGH AN ESTER BOND
    Other Details - SourceCCA-PHE-CAPROIC ACID BIOTIN OLIGOMER PURCHASED FROM DHARMACON
    SyntheticYES
 
Molecule 4 - RIBOSOMAL PROTEIN L2
    ChainsC
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN L2P, HMAL2, HL4
 
Molecule 5 - RIBOSOMAL PROTEIN L3
    ChainsD
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN L3P, HMAL3, HL1
 
Molecule 6 - RIBOSOMAL PROTEIN L4
    ChainsE
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN L4E, HMAL4, HL6
 
Molecule 7 - RIBOSOMAL PROTEIN L5
    ChainsF
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN L5P, HMAL5, HL13
 
Molecule 8 - RIBOSOMAL PROTEIN L6
    ChainsG
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN L6P, HMAL6, HL10
 
Molecule 9 - RIBOSOMAL PROTEIN L7AE
    ChainsH
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN HS6
 
Molecule 10 - RIBOSOMAL PROTEIN L10
    ChainsI
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN P0, HMAL10, L10E
 
Molecule 11 - RIBOSOMAL PROTEIN L10E
    ChainsJ
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 12 - RIBOSOMAL PROTEIN L13
    ChainsK
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN L13P, HMAL13
 
Molecule 13 - RIBOSOMAL PROTEIN L14
    ChainsL
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN L14P, HMAL14, HL27
 
Molecule 14 - RIBOSOMAL PROTEIN L15
    ChainsM
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN L15P, HMAL15, HL9
 
Molecule 15 - RIBOSOMAL PROTEIN L15E
    ChainsN
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 16 - RIBOSOMAL PROTEIN L18
    ChainsO
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN L18P, HMAL18, HL12
 
Molecule 17 - RIBOSOMAL PROTEIN L18E
    ChainsP
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN L18E, HL29, L19
 
Molecule 18 - RIBOSOMAL PROTEIN L19E
    ChainsQ
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN L19E, HMAL19, HL24
 
Molecule 19 - RIBOSOMAL PROTEIN L21E
    ChainsR
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN L21E, HL31
 
Molecule 20 - RIBOSOMAL PROTEIN L22
    ChainsS
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN L22P, HMAL22, HL23
 
Molecule 21 - RIBOSOMAL PROTEIN L23
    ChainsT
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN L23P, HMAL23, HL25, L21
 
Molecule 22 - RIBOSOMAL PROTEIN L24
    ChainsU
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN L24P, HMAL24, HL16, HL15
 
Molecule 23 - RIBOSOMAL PROTEIN L24E
    ChainsV
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN L24E, HL21/HL22
 
Molecule 24 - RIBOSOMAL PROTEIN L29
    ChainsW
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN L29P, HMAL29, HL33
 
Molecule 25 - RIBOSOMAL PROTEIN L30
    ChainsX
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN L30P, HMAL30, HL20, HL16
 
Molecule 26 - RIBOSOMAL PROTEIN L31E
    ChainsY
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN L31E, L34, HL30
 
Molecule 27 - RIBOSOMAL PROTEIN L32E
    ChainsZ
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN L32E, HL5
 
Molecule 28 - RIBOSOMAL PROTEIN L37AE
    Chains1
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 29 - RIBOSOMAL PROTEIN L37E
    Chains2
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN L37E, L35E
 
Molecule 30 - RIBOSOMAL PROTEIN L39E
    Chains3
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEINS L39E, HL39E, HL46E
 
Molecule 31 - RIBOSOMAL PROTEIN L44E
    Chains4
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Synonym50S RIBOSOMAL PROTEIN L44E, LA, HLA

 Structural Features

(-) Chains, Units

  12345678910111213141516171819202122232425262728293031
Asymmetric/Biological Unit ABCDEFGHIJKLMNOPQRSTUVWXYZ12345

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (8, 237)

Asymmetric/Biological Unit (8, 237)
No.NameCountTypeFull Name
1ACA1Ligand/Ion6-AMINOHEXANOIC ACID
2CD5Ligand/IonCADMIUM ION
3CL22Ligand/IonCHLORIDE ION
4K2Ligand/IonPOTASSIUM ION
5MG119Ligand/IonMAGNESIUM ION
6NA86Ligand/IonSODIUM ION
7PHA1Ligand/IonPHENYLALANINAL
8SPS1Ligand/IonSPARSOMYCIN

(-) Sites  (237, 237)

Asymmetric Unit (237, 237)
No.NameEvidenceResiduesDescription
001AC1SOFTWAREG A:2482 , A A:2483 , C A:2533 , C A:2534 , HOH A:3144 , HOH A:7309 , HOH A:8697BINDING SITE FOR RESIDUE MG A 8001
002AC2SOFTWAREG A:627 , A A:2483 , C A:2534 , HOH A:3858 , HOH A:7287 , HOH A:7288BINDING SITE FOR RESIDUE MG A 8002
003AC3SOFTWAREA A:876 , G A:877 , A A:2624 , HOH A:3194 , HOH A:8541 , HOH C:8536BINDING SITE FOR RESIDUE MG A 8003
004AC4SOFTWAREG A:456 , A A:459 , HOH A:3311 , HOH A:7294 , HOH A:8566 , HOH A:9298BINDING SITE FOR RESIDUE MG A 8004
005AC5SOFTWAREA A:1836 , U A:1838 , A A:1839 , HOH A:3140 , HOH A:7310 , HOH A:7311BINDING SITE FOR RESIDUE MG A 8005
006AC6SOFTWAREU A:821 , C A:822 , G A:854 , HOH A:3146 , HOH A:3282 , HOH A:9330BINDING SITE FOR RESIDUE MG A 8006
007AC7SOFTWAREU A:832 , A A:1839 , A A:1840 , HOH A:7299 , HOH A:8528 , HOH A:9883BINDING SITE FOR RESIDUE MG A 8007
008AC8SOFTWAREU A:919 , C A:2464 , A A:2465 , HOH A:3158 , HOH A:7303 , HOH A:7387BINDING SITE FOR RESIDUE MG A 8008
009AC9SOFTWAREG A:2093 , U A:2610 , G A:2611 , A A:2612 , HOH A:3268 , HOH A:6964 , HOH A:7304 , HOH A:7305BINDING SITE FOR RESIDUE MG A 8009
010AD1SOFTWAREGLY 4:45 , GLY 4:47 , ASP 4:49 , HOH 4:8526 , HOH 4:8576 , HOH 4:8577BINDING SITE FOR RESIDUE MG 4 8078
011AD2SOFTWARECYS 4:11 , CYS 4:14 , CYS 4:71 , CYS 4:74 , HOH 4:8561BINDING SITE FOR RESIDUE CD 4 8404
012AD3SOFTWAREASP 4:66BINDING SITE FOR RESIDUE CL 4 8504
013BC1SOFTWAREG A:836 , U A:2615 , HOH A:3368 , HOH A:8792 , HOH A:8882 , GLN D:230BINDING SITE FOR RESIDUE MG A 8010
014BC2SOFTWAREG A:824 , G A:854 , HOH A:3486 , HOH A:3824 , HOH A:3961 , HOH A:4065BINDING SITE FOR RESIDUE MG A 8011
015BC3SOFTWAREG A:28 , HOH A:3176 , HOH A:7388 , HOH A:8558 , HOH A:9157 , HOH A:9752BINDING SITE FOR RESIDUE MG A 8012
016BC4SOFTWAREG A:877 , G A:2623 , HOH A:3171 , HOH A:3183 , HOH A:7318 , HOH A:8540BINDING SITE FOR RESIDUE MG A 8013
017BC5SOFTWAREG A:2102 , G A:2537 , HOH A:3187 , HOH A:3696 , HOH A:7285 , HOH A:8553BINDING SITE FOR RESIDUE MG A 8014
018BC6SOFTWAREA A:844 , A A:1689 , HOH A:3150 , HOH A:7320 , HOH A:8526 , HOH A:8544BINDING SITE FOR RESIDUE MG A 8015
019BC7SOFTWAREA A:1504 , A A:1678 , C A:1679 , HOH A:3275 , HOH A:7312 , HOH A:7313BINDING SITE FOR RESIDUE MG A 8016
020BC8SOFTWAREG A:456 , HOH A:3471 , HOH A:7295 , HOH A:8935 , GLY E:86 , HOH E:8358 , HOH E:8467BINDING SITE FOR RESIDUE MG A 8017
021BC9SOFTWAREA A:1291 , G A:1292 , HOH A:3142 , HOH A:7002 , HOH A:7389 , HOH A:9745BINDING SITE FOR RESIDUE MG A 8018
022CC1SOFTWAREA A:2011 , HOH A:3683 , HOH A:6768 , HOH A:7314 , HOH A:7315 , HOH A:7316BINDING SITE FOR RESIDUE MG A 8019
023CC2SOFTWAREC A:1830 , HOH A:7298 , HOH A:7317 , HOH A:8642 , HOH A:8645 , HOH A:8718BINDING SITE FOR RESIDUE MG A 8020
024CC3SOFTWAREG A:2304 , HOH A:3167 , HOH A:3168 , HOH A:7301 , HOH A:7302 , HOH A:9483BINDING SITE FOR RESIDUE MG A 8021
025CC4SOFTWAREG A:2097 , G A:2540 , HOH A:3398 , HOH A:7306 , HOH A:8631 , HOH A:8978BINDING SITE FOR RESIDUE MG A 8022
026CC5SOFTWAREG A:2617 , G A:2618 , HOH A:3156 , HOH A:3349 , HOH A:7322 , HOH A:7323BINDING SITE FOR RESIDUE MG A 8023
027CC6SOFTWAREA A:1381 , HOH A:4664 , HOH A:7390 , HOH A:9456 , HOH Y:7830BINDING SITE FOR RESIDUE MG A 8024
028CC7SOFTWAREU A:1120 , G A:1121 , HOH A:3701 , HOH A:7324 , HOH A:7325 , HOH A:7391BINDING SITE FOR RESIDUE MG A 8025
029CC8SOFTWAREC A:2608 , G A:2609 , U A:2610 , HOH A:7326 , HOH A:7327 , HOH A:8913BINDING SITE FOR RESIDUE MG A 8026
030CC9SOFTWAREC A:240 , G A:269 , HOH A:3401 , HOH A:3543 , HOH A:3688 , HOH A:7392BINDING SITE FOR RESIDUE MG A 8027
031DC1SOFTWAREA A:1448 , U A:1677 , HOH A:3206 , HOH A:3227 , HOH A:3239 , HOH A:9095 , HOH T:8347BINDING SITE FOR RESIDUE MG A 8028
032DC2SOFTWAREA A:1502 , U A:1503 , A A:1504 , C A:1679 , HOH A:7330 , HOH A:7331 , HOH A:7332 , HOH A:7333BINDING SITE FOR RESIDUE MG A 8029
033DC3SOFTWAREU A:1748 , U A:1749 , HOH A:3169 , HOH A:7296 , HOH A:7297 , HOH A:7307BINDING SITE FOR RESIDUE MG A 8030
034DC4SOFTWAREU A:777 , C A:778 , HOH A:7335 , HOH A:7336 , HOH A:7337 , NA A:8325 , HOH A:9801BINDING SITE FOR RESIDUE MG A 8031
035DC5SOFTWAREU A:2115 , HOH A:3317 , HOH A:3723 , HOH A:9509 , ALA C:196 , HOH C:8550 , HOH C:8624BINDING SITE FOR RESIDUE MG A 8032
036DC6SOFTWAREA A:1747 , U A:1748 , U A:1749 , G A:2585 , HOH A:3345 , HOH A:9197BINDING SITE FOR RESIDUE MG A 8033
037DC7SOFTWAREA A:2302 , A A:2303 , HOH A:3172 , HOH A:3298 , HOH A:4407 , HOH A:7338BINDING SITE FOR RESIDUE MG A 8034
038DC8SOFTWAREG A:1484 , HOH A:3244 , HOH A:7339 , HOH A:7340 , HOH A:7394 , HOH A:7395BINDING SITE FOR RESIDUE MG A 8035
039DC9SOFTWAREG A:956 , HOH A:3198 , HOH A:7341 , HOH A:7342 , HOH A:7343 , HOH A:8888BINDING SITE FOR RESIDUE MG A 8036
040EC1SOFTWAREA A:2553 , A A:2576 , HOH A:3177 , HOH A:7396 , HOH A:8597 , HOH A:9657 , HOH A:9735BINDING SITE FOR RESIDUE MG A 8037
041EC2SOFTWAREHOH A:3154 , HOH A:3178 , HOH A:3199 , HOH A:3201 , HOH A:7345 , HOH A:8802BINDING SITE FOR RESIDUE MG A 8038
042EC3SOFTWAREA A:114 , U A:115 , HOH A:3493 , HOH A:4642 , HOH A:7346 , HOH A:7347 , HOH A:9429BINDING SITE FOR RESIDUE MG A 8039
043EC4SOFTWAREU A:392 , HOH A:3318 , HOH A:4183 , HOH A:7398 , HOH A:7399 , HOH A:9211BINDING SITE FOR RESIDUE MG A 8040
044EC5SOFTWAREC A:195 , G A:196 , A A:227 , C A:228 , HOH A:3638 , HOH A:3734 , HOH A:4920BINDING SITE FOR RESIDUE MG A 8041
045EC6SOFTWAREU A:1309 , U A:1346 , HOH A:3186 , HOH A:3957 , HOH A:7348 , HOH A:8957BINDING SITE FOR RESIDUE MG A 8042
046EC7SOFTWAREG A:816 , G A:817 , HOH A:6950 , HOH A:7400 , MG A:8106 , HOH A:9334BINDING SITE FOR RESIDUE MG A 8043
047EC8SOFTWAREC A:2048 , C A:2088 , A A:2089 , HOH A:9820 , GLY S:65 , HOH S:8589BINDING SITE FOR RESIDUE MG A 8044
048EC9SOFTWAREG A:1979 , HOH A:7349 , HOH A:7401 , HOH A:7402 , HOH A:7403BINDING SITE FOR RESIDUE MG A 8045
049FC1SOFTWAREG A:1794 , HOH A:6832 , HOH A:7404 , HOH A:7405BINDING SITE FOR RESIDUE MG A 8046
050FC2SOFTWAREA A:1098 , HOH A:5808 , HOH A:7419 , HOH A:9651BINDING SITE FOR RESIDUE MG A 8047
051FC3SOFTWAREA A:2746 , G A:2750 , HOH A:5419 , HOH A:5799 , HOH A:7406 , HOH A:7441BINDING SITE FOR RESIDUE MG A 8048
052FC4SOFTWAREG A:2421 , U A:2422 , C A:2423 , HOH A:7407BINDING SITE FOR RESIDUE MG A 8049
053FC5SOFTWAREC A:2248 , HOH A:6855BINDING SITE FOR RESIDUE MG A 8050
054FC6SOFTWAREG A:641 , HOH A:3633 , HOH A:7350 , HOH A:7351BINDING SITE FOR RESIDUE MG A 8051
055FC7SOFTWAREU A:1125 , C A:1129 , HOH A:3152 , HOH A:7421 , HOH A:9110 , HOH B:2357 , G B:3092BINDING SITE FOR RESIDUE MG A 8052
056FC8SOFTWAREG A:471 , HOH A:3936 , HOH A:5159 , HOH A:8725 , HOH A:8763 , HOH A:9561BINDING SITE FOR RESIDUE MG A 8053
057FC9SOFTWAREC A:162 , A A:169 , U A:2276 , HOH A:7300 , HOH A:7352 , HOH A:7353 , HOH A:8953BINDING SITE FOR RESIDUE MG A 8054
058GC1SOFTWAREHOH A:3286 , HOH A:3323 , HOH A:5955 , HOH A:7251 , HOH A:7422 , HOH D:8660BINDING SITE FOR RESIDUE MG A 8055
059GC2SOFTWAREA A:2757 , HOH A:3196 , HOH A:3501 , HOH A:7371 , HOH A:9502 , ASN D:335BINDING SITE FOR RESIDUE MG A 8056
060GC3SOFTWAREU A:1883 , U A:2012 , G A:2013 , HOH A:4550 , GLN C:207 , HOH C:8627BINDING SITE FOR RESIDUE MG A 8057
061GC4SOFTWAREG A:2013 , HOH A:3292 , HOH A:7354 , HOH A:7355 , HOH C:8625 , HOH C:8627BINDING SITE FOR RESIDUE MG A 8058
062GC5SOFTWAREG A:2618 , HOH A:3250 , HOH A:3580 , HOH A:7308 , HOH A:8557 , HOH A:8561BINDING SITE FOR RESIDUE MG A 8059
063GC6SOFTWAREG A:175 , U A:224 , G A:393 , HOH A:7356 , HOH A:7357 , HOH A:7358 , HOH A:8690BINDING SITE FOR RESIDUE MG A 8060
064GC7SOFTWAREA A:1369 , U A:2650 , HOH A:7359 , HOH A:7360 , HOH A:7361 , HOH A:9340BINDING SITE FOR RESIDUE MG A 8061
065GC8SOFTWAREG A:1489 , G A:1491 , HOH A:3161 , HOH A:3485 , HOH A:5712 , HOH A:8915BINDING SITE FOR RESIDUE MG A 8062
066GC9SOFTWAREHOH A:3713 , HOH A:6540 , HOH A:6971 , HOH A:7293 , HOH A:7370 , HOH A:7423BINDING SITE FOR RESIDUE MG A 8063
067HC1SOFTWAREU A:2277 , U A:2278 , G A:2471 , HOH A:6816BINDING SITE FOR RESIDUE MG A 8064
068HC2SOFTWAREC A:1872 , G A:1873 , HOH A:3887 , ASP C:26BINDING SITE FOR RESIDUE MG A 8066
069HC3SOFTWAREA A:1845 , U A:1846 , G A:1884 , HOH A:7363 , ASN C:188BINDING SITE FOR RESIDUE MG A 8067
070HC4SOFTWAREA A:2568 , HOH A:3280 , HOH A:4360 , HOH A:5759 , HOH A:7424 , HOH A:9253BINDING SITE FOR RESIDUE MG A 8068
071HC5SOFTWAREA A:166 , G A:219 , HOH A:3346 , HOH A:4497 , HOH A:5134 , HOH A:8643BINDING SITE FOR RESIDUE MG A 8070
072HC6SOFTWAREHOH A:3642 , HOH A:5592 , HOH A:6955 , HOH A:7096 , HOH A:7368 , HOH A:7369BINDING SITE FOR RESIDUE MG A 8071
073HC7SOFTWAREU A:954 , HOH A:3524 , HOH A:6949 , HOH A:7367 , HOH A:7425 , HOH A:9757BINDING SITE FOR RESIDUE MG A 8072
074HC8SOFTWAREA A:1286 , A A:1287 , HOH A:7364 , HOH A:7365 , HOH A:7426 , HOH X:7874BINDING SITE FOR RESIDUE MG A 8074
075HC9SOFTWAREA A:907 , A A:908 , HOH A:3166 , HOH A:3443 , HOH A:4476 , HOH A:7366BINDING SITE FOR RESIDUE MG A 8075
076IC1SOFTWAREHOH 3:7875 , HOH A:6391 , HOH A:7372 , HOH A:7373 , HOH A:7427 , HOH A:7428BINDING SITE FOR RESIDUE MG A 8076
077IC2SOFTWAREC A:880 , U A:883 , HOH A:3151 , HOH A:7374 , HOH A:7375 , HOH A:8762BINDING SITE FOR RESIDUE MG A 8077
078IC3SOFTWAREA A:165 , A A:167 , C A:168 , HOH A:3139 , HOH A:3145 , HOH A:3157BINDING SITE FOR RESIDUE MG A 8079
079IC4SOFTWAREA A:1684 , U A:1724 , HOH A:3739 , HOH A:4030 , HOH A:7376 , HOH A:7429BINDING SITE FOR RESIDUE MG A 8080
080IC5SOFTWAREC A:1420 , C A:1421 , G A:1438 , HOH A:3628 , HOH A:9131BINDING SITE FOR RESIDUE MG A 8081
081IC6SOFTWAREC A:1436 , A A:1437 , HOH A:4700 , HOH A:4786 , HOH A:7437 , HOH Q:7890BINDING SITE FOR RESIDUE MG A 8082
082IC7SOFTWAREA A:1754 , HOH A:3235 , HOH A:3684 , HOH A:5894 , HOH A:7377 , HOH A:7430BINDING SITE FOR RESIDUE MG A 8083
083IC8SOFTWAREA A:1742 , G A:1745 , HOH A:3164 , HOH A:7378 , HOH A:8771 , HOH A:8895 , HOH A:9272BINDING SITE FOR RESIDUE MG A 8084
084IC9SOFTWAREG A:2617 , G A:2618 , HOH A:3316 , HOH A:3895 , HOH A:4023 , HOH A:8557 , HOH A:9121BINDING SITE FOR RESIDUE MG A 8085
085JC1SOFTWAREA A:532 , U A:533 , HOH A:3261 , HOH A:3502 , HOH A:7379 , HOH A:7380BINDING SITE FOR RESIDUE MG A 8086
086JC2SOFTWAREA A:682 , G A:683 , HOH A:3205 , HOH A:7438BINDING SITE FOR RESIDUE MG A 8087
087JC3SOFTWAREG A:2540 , G A:2611 , HOH A:3826 , NA A:8339 , HOH A:8583 , HOH A:8816 , HOH A:9565BINDING SITE FOR RESIDUE MG A 8088
088JC4SOFTWAREC A:515 , A A:516 , U A:517 , G A:518 , HOH A:7381 , HOH A:7431 , HOH A:7432BINDING SITE FOR RESIDUE MG A 8089
089JC5SOFTWAREA A:2103 , U A:2478 , HOH A:3143 , HOH A:3326BINDING SITE FOR RESIDUE MG A 8090
090JC6SOFTWAREG A:918 , HOH A:6020 , HOH A:7382 , HOH A:8612 , HOH A:9068 , HOH A:9848BINDING SITE FOR RESIDUE MG A 8091
091JC7SOFTWAREC A:1844 , HOH A:3174 , HOH A:3188 , HOH A:7433BINDING SITE FOR RESIDUE MG A 8092
092JC8SOFTWAREA A:1070 , G A:1071 , HOH A:3179 , HOH A:3210 , HOH A:3251 , HOH A:9203BINDING SITE FOR RESIDUE MG A 8093
093JC9SOFTWAREU A:1096 , C A:1257 , HOH A:7383 , HOH A:7434BINDING SITE FOR RESIDUE MG A 8094
094KC1SOFTWAREG A:1848 , G A:1849 , HOH A:3191 , HOH A:3228 , HOH A:3363 , HOH A:3393 , MG A:8116BINDING SITE FOR RESIDUE MG A 8096
095KC2SOFTWAREG A:863 , U A:864 , HOH A:3200 , HOH A:3204 , HOH A:5096 , HOH A:9865BINDING SITE FOR RESIDUE MG A 8097
096KC3SOFTWAREA A:907 , HOH A:3212 , HOH A:3277 , HOH A:9462 , HOH A:9896 , HOH Z:8563BINDING SITE FOR RESIDUE MG A 8098
097KC4SOFTWAREA A:2612 , HOH A:3195 , HOH A:3207 , HOH A:9533BINDING SITE FOR RESIDUE MG A 8099
098KC5SOFTWAREG A:2080 , HOH A:3295 , HOH A:3784 , HOH A:5049 , HOH A:7384 , HOH A:7385BINDING SITE FOR RESIDUE MG A 8100
099KC6SOFTWAREU A:2107 , C A:2281 , U A:2282 , HOH A:3276 , HOH A:4162 , HOH A:6445BINDING SITE FOR RESIDUE MG A 8101
100KC7SOFTWAREHOH 4:8523 , A A:2434 , U A:2458 , HOH A:7442 , HOH A:8774 , HOH A:9411BINDING SITE FOR RESIDUE MG A 8102
101KC8SOFTWAREG A:2578 , G A:2579 , HOH A:7435BINDING SITE FOR RESIDUE MG A 8103
102KC9SOFTWAREC A:2104 , C A:2105 , HOH A:7290 , HOH A:7291BINDING SITE FOR RESIDUE MG A 8104
103LC1SOFTWAREG A:817 , HOH A:3128 , HOH A:6950 , HOH A:7400 , MG A:8043 , HOH Q:5319 , HOH Q:7259BINDING SITE FOR RESIDUE MG A 8106
104LC2SOFTWAREA A:1106 , A A:1107 , HOH A:7409 , HOH A:7410 , HOH A:7411 , HOH A:7412BINDING SITE FOR RESIDUE MG A 8107
105LC3SOFTWAREG A:2000 , G A:2001 , HOH A:5637 , HOH A:7029 , HOH A:7414 , HOH A:7415 , HOH A:7416BINDING SITE FOR RESIDUE MG A 8108
106LC4SOFTWAREU A:903 , A A:1357 , HOH A:3453 , HOH A:4943 , HOH A:5570 , HOH A:9030BINDING SITE FOR RESIDUE MG A 8110
107LC5SOFTWAREG A:2609 , HOH A:3225 , HOH A:3249 , HOH A:5145 , HOH A:5291 , HOH A:9824BINDING SITE FOR RESIDUE MG A 8111
108LC6SOFTWAREA A:187 , HOH A:3255 , HOH A:3296 , HOH A:8649 , HOH A:8851 , HOH A:9090BINDING SITE FOR RESIDUE MG A 8112
109LC7SOFTWAREA A:2112 , HOH A:3281 , HOH A:3451 , HOH A:5670 , HOH A:5937 , HOH A:6816 , HOH A:9109BINDING SITE FOR RESIDUE MG A 8113
110LC8SOFTWAREA A:2430 , HOH A:3197 , HOH A:3492 , HOH A:4356 , HOH A:8870 , HOH A:8972BINDING SITE FOR RESIDUE MG A 8114
111LC9SOFTWAREHOH A:3819 , HOH A:3835 , HOH A:6140 , HOH A:6272 , HOH C:8554 , HOH C:8628BINDING SITE FOR RESIDUE MG A 8115
112MC1SOFTWAREG A:1849 , U A:1850 , HOH A:3191 , HOH A:3217 , HOH A:3393 , HOH A:6272 , MG A:8096 , HOH C:8554BINDING SITE FOR RESIDUE MG A 8116
113MC2SOFTWAREA A:1840 , C A:1841 , A A:2022 , HOH A:4177 , HOH A:6098 , HOH A:8745BINDING SITE FOR RESIDUE MG A 8117
114MC3SOFTWAREC A:1377 , G A:1683 , HOH A:3267 , HOH A:4064 , HOH A:6783BINDING SITE FOR RESIDUE MG A 8119
115MC4SOFTWAREC A:1069 , G A:1072 , G A:1087 , HOH A:4510 , HOH A:9691 , HOH A:9725BINDING SITE FOR RESIDUE NA A 8301
116MC5SOFTWAREG A:1119 , U A:1120 , G A:1121 , U A:1122 , HOH A:5228 , HOH A:7325BINDING SITE FOR RESIDUE NA A 8302
117MC6SOFTWAREA A:643 , G A:644 , U A:904 , G A:1354 , ARG M:8BINDING SITE FOR RESIDUE NA A 8303
118MC7SOFTWAREA A:630 , A A:631 , A A:2074 , HOH A:3619 , HOH A:4240 , HOH A:5327BINDING SITE FOR RESIDUE NA A 8305
119MC8SOFTWAREG A:2092 , G A:2093 , G A:2094 , A A:2612 , A A:2649 , HOH A:8647BINDING SITE FOR RESIDUE NA A 8306
120MC9SOFTWAREC A:40 , G A:41 , A A:442 , C A:443BINDING SITE FOR RESIDUE NA A 8307
121NC1SOFTWAREC A:1394 , U A:1432 , G A:1433 , U A:1724 , HOH A:9938BINDING SITE FOR RESIDUE NA A 8308
122NC2SOFTWAREA A:1133 , G A:1134 , LYS J:150 , VAL J:153 , THR J:154 , PRO J:155BINDING SITE FOR RESIDUE NA A 8309
123NC3SOFTWAREA A:2577 , G A:2578 , G A:2579 , HOH A:4043BINDING SITE FOR RESIDUE NA A 8310
124NC4SOFTWAREG A:2524 , G A:2525 , HOH A:3102 , HOH A:4193 , HOH A:8704BINDING SITE FOR RESIDUE NA A 8311
125NC5SOFTWAREG A:2399 , HOH A:3364 , HOH A:4610 , HOH A:4661 , HOH A:9472BINDING SITE FOR RESIDUE NA A 8313
126NC6SOFTWAREU A:2541 , U A:2607 , HOH A:8852 , HOH A:9652 , TRP D:242BINDING SITE FOR RESIDUE NA A 8314
127NC7SOFTWAREA A:165 , A A:166 , A A:167 , HOH A:9206BINDING SITE FOR RESIDUE NA A 8315
128NC8SOFTWAREC A:896 , A A:897 , HOH A:5852 , HOH A:8550BINDING SITE FOR RESIDUE NA A 8316
129NC9SOFTWARETRP 3:42 , ASN 3:45 , HOH 3:4135 , G A:1416 , G A:1417 , HOH A:8798BINDING SITE FOR RESIDUE NA A 8317
130OC1SOFTWAREG A:2543 , G A:2544 , HOH A:3457 , NA A:8320 , HOH A:9987BINDING SITE FOR RESIDUE NA A 8318
131OC2SOFTWAREA A:2465 , G A:2466 , HOH A:3794 , HOH A:5585 , HOH A:8580 , ASP M:36BINDING SITE FOR RESIDUE NA A 8319
132OC3SOFTWAREG A:2543 , G A:2611 , U A:2615 , NA A:8318 , HOH A:8577 , HOH A:8608 , HOH A:9263BINDING SITE FOR RESIDUE NA A 8320
133OC4SOFTWAREG A:836 , U A:837 , A A:1736 , A A:1737 , ARG D:229BINDING SITE FOR RESIDUE NA A 8321
134OC5SOFTWAREG A:885 , A A:2112 , G A:2113 , C A:2475 , C A:2476 , HOH A:4018BINDING SITE FOR RESIDUE NA A 8323
135OC6SOFTWAREA A:45 , C A:130 , U A:146 , G A:147 , HOH A:3660 , HOH A:9014BINDING SITE FOR RESIDUE NA A 8324
136OC7SOFTWAREA A:776 , U A:777 , U A:779 , HOH A:7201 , MG A:8031 , HOH A:9145 , HOH A:9801BINDING SITE FOR RESIDUE NA A 8325
137OC8SOFTWAREG A:1971 , G A:2009 , A A:2010 , U A:2012BINDING SITE FOR RESIDUE NA A 8326
138OC9SOFTWAREU A:821 , C A:853 , G A:854 , U A:1831 , HOH A:8556 , HOH A:9249 , HOH A:9729BINDING SITE FOR RESIDUE NA A 8327
139PC1SOFTWAREG A:56 , A A:59 , A A:60 , G A:61 , HOH A:4757 , HOH A:6015BINDING SITE FOR RESIDUE NA A 8328
140PC2SOFTWAREG A:66 , U A:107 , U A:108 , HOH A:6117BINDING SITE FOR RESIDUE NA A 8329
141PC3SOFTWAREG A:140 , C A:141 , G A:142 , HOH A:8755BINDING SITE FOR RESIDUE NA A 8330
142PC4SOFTWAREU A:170 , C A:171 , C A:218 , G A:221 , HOH A:8821BINDING SITE FOR RESIDUE NA A 8331
143PC5SOFTWAREG A:386 , G A:387 , G A:388 , C A:401 , U A:402 , HOH A:6605BINDING SITE FOR RESIDUE NA A 8332
144PC6SOFTWAREC A:1894 , U A:1897 , G A:1898 , U A:1939BINDING SITE FOR RESIDUE NA A 8333
145PC7SOFTWAREC A:1894 , A A:1895 , G A:1896 , U A:1897 , HOH A:4792BINDING SITE FOR RESIDUE NA A 8334
146PC8SOFTWAREG A:622 , U A:623 , A A:628 , A A:630 , HOH A:9392BINDING SITE FOR RESIDUE NA A 8335
147PC9SOFTWAREG A:1706 , G A:1707 , HOH A:4882 , HOH A:6883 , HOH A:7228 , HOH A:9443BINDING SITE FOR RESIDUE NA A 8336
148QC1SOFTWAREU A:2659 , G A:2660 , VAL S:72 , TRP S:75 , NA S:8337 , HOH S:8513 , HOH S:8525BINDING SITE FOR RESIDUE NA A 8338
149QC2SOFTWAREG A:2540 , G A:2611 , G A:2616 , U A:2645 , HOH A:3826 , MG A:8088BINDING SITE FOR RESIDUE NA A 8339
150QC3SOFTWAREU A:1740 , U A:1741 , G A:2033 , HOH A:9557BINDING SITE FOR RESIDUE NA A 8340
151QC4SOFTWAREG A:681 , A A:682 , G A:683 , HOH A:3548BINDING SITE FOR RESIDUE NA A 8341
152QC5SOFTWAREG A:892 , C A:893 , HOH A:5170 , HOH A:5805BINDING SITE FOR RESIDUE NA A 8342
153QC6SOFTWAREU A:2663 , A A:2811 , A A:2812 , A A:2816 , G A:2817 , HOH A:8744BINDING SITE FOR RESIDUE NA A 8344
154QC7SOFTWAREA A:914 , C A:915 , C A:1043 , C A:1044 , G A:1045BINDING SITE FOR RESIDUE NA A 8349
155QC8SOFTWAREU A:623 , U A:624 , G A:901 , HOH A:6493BINDING SITE FOR RESIDUE NA A 8350
156QC9SOFTWAREA A:955 , HOH A:4799 , HOH A:6145 , C B:3081 , U B:3082BINDING SITE FOR RESIDUE NA A 8352
157RC1SOFTWAREA A:1040 , G A:1295 , A A:1296 , HOH A:4416 , GLY M:14 , HOH M:8514BINDING SITE FOR RESIDUE NA A 8353
158RC2SOFTWAREU A:768 , C A:769 , G A:2111 , A A:2112 , HOH A:4357 , HOH A:7133BINDING SITE FOR RESIDUE NA A 8354
159RC3SOFTWAREG A:1119 , C A:1243 , HOH A:4349 , THR K:47BINDING SITE FOR RESIDUE NA A 8355
160RC4SOFTWAREC A:920 , U A:2278 , G A:2279 , A A:2463 , HOH A:8975BINDING SITE FOR RESIDUE NA A 8356
161RC5SOFTWAREG A:941 , U A:942 , C A:1023 , G A:1024 , HOH A:5812BINDING SITE FOR RESIDUE NA A 8357
162RC6SOFTWAREG A:2094 , G A:2611 , HOH A:3398 , HOH A:6964 , HOH A:7321 , HOH A:8854 , HOH A:9006 , TRP D:242BINDING SITE FOR RESIDUE NA A 8358
163RC7SOFTWAREG A:898 , A A:922 , A A:923 , G A:924 , U A:2109BINDING SITE FOR RESIDUE NA A 8359
164RC8SOFTWAREA A:453 , U A:454 , C A:478 , G A:479 , HOH A:5497BINDING SITE FOR RESIDUE NA A 8360
165RC9SOFTWAREU A:837 , HOH A:4444 , HOH A:6363 , HOH A:6872 , GLN D:230BINDING SITE FOR RESIDUE NA A 8361
166SC1SOFTWAREA A:167 , C A:168 , G A:2110 , G A:2111 , U A:2277BINDING SITE FOR RESIDUE NA A 8362
167SC2SOFTWAREU A:1359 , C A:1360 , HOH A:9999 , GLY E:66BINDING SITE FOR RESIDUE NA A 8363
168SC3SOFTWAREG A:636 , U A:2057 , G A:2058 , HOH A:9113 , HOH A:9337BINDING SITE FOR RESIDUE NA A 8364
169SC4SOFTWAREU A:391 , U A:392 , U A:398 , C A:399 , LYS N:193 , ALA N:194BINDING SITE FOR RESIDUE NA A 8365
170SC5SOFTWAREG A:544 , G A:545 , G A:610 , U A:611 , HOH A:3350 , HOH A:3408 , HOH A:9386 , HOH A:9404BINDING SITE FOR RESIDUE NA A 8366
171SC6SOFTWAREG A:464 , G A:475 , HOH A:4017 , HOH A:9349 , ARG E:55BINDING SITE FOR RESIDUE NA A 8367
172SC7SOFTWAREG A:798 , G A:814 , U A:815 , HOH A:3412BINDING SITE FOR RESIDUE NA A 8368
173SC8SOFTWAREU A:391 , U A:392 , A A:395 , U A:398 , HOH A:5104 , HOH A:6112BINDING SITE FOR RESIDUE NA A 8369
174SC9SOFTWAREG A:1832 , A A:2022 , HOH A:3632 , HOH A:8624BINDING SITE FOR RESIDUE NA A 8370
175TC1SOFTWAREG A:2491 , U A:2492 , G A:2529 , HOH A:9146BINDING SITE FOR RESIDUE NA A 8371
176TC2SOFTWAREU A:919 , G A:921 , G A:924BINDING SITE FOR RESIDUE NA A 8372
177TC3SOFTWAREG A:1576 , U A:1577 , G A:1618 , G A:1619 , HOH A:3208 , HOH A:6836BINDING SITE FOR RESIDUE NA A 8373
178TC4SOFTWAREC A:195 , G A:196 , A A:415 , G A:416 , HOH A:9416BINDING SITE FOR RESIDUE NA A 8374
179TC5SOFTWAREG A:868 , G A:869 , A A:886 , G A:887 , HOH A:8785BINDING SITE FOR RESIDUE NA A 8375
180TC6SOFTWAREA A:632 , C A:633 , U A:2535 , C A:2536 , A A:2538 , U A:2539 , HOH A:3175 , HOH A:4396BINDING SITE FOR RESIDUE NA A 8376
181TC7SOFTWAREG A:911 , U A:1293 , G A:1295 , HOH A:5881BINDING SITE FOR RESIDUE NA A 8377
182TC8SOFTWAREC A:762 , G A:902 , U A:903 , HOH A:9733 , HIS M:18 , HOH M:8531 , HOH M:8550BINDING SITE FOR RESIDUE NA A 8378
183TC9SOFTWAREU A:831 , U A:832 , G A:833 , HOH A:3242 , HOH A:3965BINDING SITE FOR RESIDUE NA A 8379
184UC1SOFTWAREG A:2585 , U A:2586 , U A:2587 , G A:2592 , HOH A:3219 , HOH A:6607 , HOH A:8850BINDING SITE FOR RESIDUE NA A 8381
185UC2SOFTWAREG A:2772 , G A:2773 , A A:2801 , HOH A:3908BINDING SITE FOR RESIDUE NA A 8382
186UC3SOFTWAREC A:197 , HOH A:4559 , HOH A:4795BINDING SITE FOR RESIDUE NA A 8384
187UC4SOFTWAREG A:1077 , A A:1079 , C A:1080 , HOH A:7221BINDING SITE FOR RESIDUE NA A 8385
188UC5SOFTWAREG A:2102 , G A:2482 , C A:2536BINDING SITE FOR RESIDUE K A 8390
189UC6SOFTWAREC A:162 , U A:163 , U A:172 , HOH A:8535 , HOH A:8632 , HOH A:8667 , ARG N:82BINDING SITE FOR RESIDUE K A 8391
190UC7SOFTWAREG A:1676BINDING SITE FOR RESIDUE CL A 8503
191UC8SOFTWAREC A:197 , G A:201 , HOH A:4447BINDING SITE FOR RESIDUE CL A 8505
192UC9SOFTWAREC A:2388 , HOH A:9685 , PHE R:52 , HIS R:53BINDING SITE FOR RESIDUE CL A 8511
193VC1SOFTWAREG A:2582 , A A:2596 , HOH A:4639 , LYS L:14 , ILE L:32 , SER L:33BINDING SITE FOR RESIDUE CL A 8512
194VC2SOFTWAREG A:1299 , G A:1300 , A A:1328 , A A:1329 , HOH A:4198BINDING SITE FOR RESIDUE CL A 8513
195VC3SOFTWAREG A:644 , HIS M:13 , HOH M:8596BINDING SITE FOR RESIDUE CL A 8514
196VC4SOFTWAREA A:1597 , A A:1598 , G A:1646BINDING SITE FOR RESIDUE CL A 8515
197VC5SOFTWAREG A:1119 , C A:1243 , LYS K:56BINDING SITE FOR RESIDUE CL A 8516
198VC6SOFTWAREC A:594 , U A:595 , ARG Z:115 , HOH Z:8553BINDING SITE FOR RESIDUE CL A 8517
199VC7SOFTWAREG A:1072 , G A:1087 , A A:1291BINDING SITE FOR RESIDUE CL A 8522
200VC8SOFTWAREG B:3021 , A B:3056 , A B:3057 , HOH B:7361BINDING SITE FOR RESIDUE MG B 8095
201VC9SOFTWAREC B:3040BINDING SITE FOR RESIDUE NA B 8351
202WC1SOFTWAREG B:3021 , G B:3022 , U B:3055 , A B:3057 , G B:3058 , C B:3059 , HOH B:7361BINDING SITE FOR RESIDUE NA B 8383
203WC2SOFTWAREMG 5:8118 , C 5:9075 , A 5:9076 , PHA 5:9077 , A A:2486 , C A:2487 , U A:2619 , U A:2620 , A A:2637BINDING SITE FOR RESIDUE SPS 5 9080
204WC3SOFTWAREC 5:9075 , A 5:9076 , SPS 5:9080 , HOH A:3059 , HOH A:3878 , HOH A:4175BINDING SITE FOR RESIDUE MG 5 8118
205WC4SOFTWAREA 5:9076 , ACA 5:9078 , SPS 5:9080 , A A:2103 , C A:2104 , U A:2620BINDING SITE FOR RESIDUE PHA 5 9077
206WC5SOFTWAREPHA 5:9077 , G A:2102 , A A:2486 , A A:2538BINDING SITE FOR RESIDUE ACA 5 9078
207WC6SOFTWAREHOH A:3496 , HOH A:9444 , HOH C:8525 , HOH C:8551 , HOH C:8598 , HOH C:8626BINDING SITE FOR RESIDUE MG C 8065
208WC7SOFTWAREA A:2633 , PHE C:201 , GLY C:202 , GLY C:203 , HIS C:208 , HOH C:8557 , HOH C:8597BINDING SITE FOR RESIDUE NA C 8345
209WC8SOFTWARELYS C:178BINDING SITE FOR RESIDUE CL C 8509
210WC9SOFTWAREHOH A:9167 , ARG D:223 , LYS D:224 , HIS D:227BINDING SITE FOR RESIDUE CL D 8519
211XC1SOFTWAREASP E:45 , THR E:94 , LYS E:96BINDING SITE FOR RESIDUE NA E 8304
212XC2SOFTWAREC A:2287 , ASP J:109 , ARG J:112BINDING SITE FOR RESIDUE NA J 8322
213XC3SOFTWAREHOH A:5300 , HOH A:9005 , ARG K:60 , VAL K:61 , ILE K:63 , TYR K:69BINDING SITE FOR RESIDUE NA K 8346
214XC4SOFTWAREILE K:127 , LYS K:128 , HOH K:4038BINDING SITE FOR RESIDUE CL K 8501
215XC5SOFTWAREPRO K:88 , HIS K:89 , LYS K:90BINDING SITE FOR RESIDUE CL K 8502
216XC6SOFTWAREHOH A:5300 , GLY K:64 , ASN K:65 , GLY K:68 , TYR K:69BINDING SITE FOR RESIDUE CL K 8521
217XC7SOFTWAREHOH A:3774 , HOH A:5583 , ASN L:42 , HOH L:1797 , HOH L:2121 , HOH L:7871BINDING SITE FOR RESIDUE MG L 8069
218XC8SOFTWAREARG M:27 , GLY M:28 , GLY M:29 , GLY M:31 , ALA M:33 , GLU M:39 , HOH M:8594BINDING SITE FOR RESIDUE NA M 8380
219XC9SOFTWAREA A:693 , ARG M:53BINDING SITE FOR RESIDUE CL M 8510
220YC1SOFTWAREASN N:106 , PHE N:109 , PRO N:110 , LEU N:112 , HOH N:8629BINDING SITE FOR RESIDUE NA N 8347
221YC2SOFTWAREASN N:106 , ARG N:113 , VAL N:114 , LEU N:157 , ARG N:158 , THR N:159BINDING SITE FOR RESIDUE CL N 8518
222YC3SOFTWARELYS F:146 , ARG O:37 , LYS O:38 , ASN O:107BINDING SITE FOR RESIDUE CL O 8507
223YC4SOFTWAREHOH A:5786 , HIS P:40BINDING SITE FOR RESIDUE CD P 8405
224YC5SOFTWAREASN P:44 , ARG P:47 , HOH P:6739BINDING SITE FOR RESIDUE CL P 8508
225YC6SOFTWAREASP R:20 , GLY R:22 , SER R:24 , SER R:46 , HOH R:1795BINDING SITE FOR RESIDUE NA R 8348
226YC7SOFTWAREHOH A:5460 , NA A:8338 , SER S:70 , VAL S:72 , HOH S:8523 , HOH S:8525BINDING SITE FOR RESIDUE NA S 8337
227YC8SOFTWARELYS S:60 , GLN S:61 , ASN S:63BINDING SITE FOR RESIDUE NA S 8386
228YC9SOFTWARELYS S:118 , HOH S:8509BINDING SITE FOR RESIDUE CL S 8506
229ZC1SOFTWAREHIS T:7 , GLU T:61 , HOH T:8323BINDING SITE FOR RESIDUE NA T 8312
230ZC2SOFTWAREGLN U:37 , ARG U:111 , LEU U:112 , SER U:114 , ASP U:117 , HOH U:2868BINDING SITE FOR RESIDUE MG U 8073
231ZC3SOFTWAREU A:308 , U A:335 , C A:342 , SER U:94 , ASN U:95 , HOH U:1124BINDING SITE FOR RESIDUE NA U 8343
232ZC4SOFTWARECYS V:6 , CYS V:9 , CYS V:32 , CYS V:36BINDING SITE FOR RESIDUE CD V 8401
233ZC5SOFTWAREHIS Z:133 , LYS Z:136 , LYS Z:137 , VAL Z:139 , HOH Z:8558 , HOH Z:8577 , HOH Z:8612BINDING SITE FOR RESIDUE MG Z 8109
234ZC6SOFTWAREHOH A:4476 , ARG Z:169BINDING SITE FOR RESIDUE CL Z 8520
235ZC7SOFTWAREARG 1:13 , PHE 1:14 , HOH A:4896 , LYS C:171 , ASN C:174BINDING SITE FOR RESIDUE MG 1 8105
236ZC8SOFTWARECYS 1:39 , CYS 1:42 , CYS 1:57 , CYS 1:60BINDING SITE FOR RESIDUE CD 1 8403
237ZC9SOFTWARECYS 2:19 , CYS 2:22 , CYS 2:34 , CYS 2:37BINDING SITE FOR RESIDUE CD 2 8402

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1M90)

(-) Cis Peptide Bonds  (6, 6)

Asymmetric/Biological Unit
No.Residues
1Trp C:186 -Pro C:187
2Gly D:14 -Pro D:15
3Asn D:243 -Pro D:244
4Val E:136 -Pro E:137
5Gln H:55 -Pro H:56
6Arg N:184 -Pro N:185

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (2, 2)

Asymmetric/Biological Unit (2, 2)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_RL6_HALMA_001 *R3SRL6_HALMA  ---  ---GR2S
2UniProtVAR_RL6_HALMA_002 *E24SRL6_HALMA  ---  ---GE23S
   * ID not provided by source

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (23, 23)

Asymmetric/Biological Unit (23, 23)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1RIBOSOMAL_L37EPS01077 Ribosomal protein L37e signature.RL37_HALMA5-24  12:4-23
2RIBOSOMAL_L19EPS00526 Ribosomal protein L19e signature.RL19E_HALMA7-26  1Q:6-25
3RIBOSOMAL_L24EPS01073 Ribosomal protein L24e signature.RL24E_HALMA9-26  1V:8-25
4RIBOSOMAL_L30PS00634 Ribosomal protein L30 signature.RL30_HALMA20-52  1X:20-52
5RIBOSOMAL_L39EPS00051 Ribosomal protein L39e signature.RL39_HALMA29-45  13:28-44
6RIBOSOMAL_L18EPS01106 Ribosomal protein L18e signature.RL18E_HALMA32-49  1P:31-48
7RIBOSOMAL_L21EPS01171 Ribosomal protein L21e signature.RL21_HALMA37-62  1R:36-61
8RIBOSOMAL_L5PS00358 Ribosomal protein L5 signature.RL5_HALMA42-58  1F:41-57
9RIBOSOMAL_L29PS00579 Ribosomal protein L29 signature.RL29_HALMA43-57  1W:42-56
10RIBOSOMAL_L24PS01108 Ribosomal protein L24 signature.RL24_HALMA46-63  1U:45-62
11RIBOSOMAL_L31EPS01144 Ribosomal protein L31e signature.RL31_HALMA49-63  1Y:48-62
12RIBOSOMAL_L44EPS01172 Ribosomal protein L44e signature.RL44E_HALMA60-71  14:60-71
13RIBOSOMAL_L23PS00050 Ribosomal protein L23 signature.RL23_HALMA63-78  1T:62-77
14RIBOSOMAL_L7AEPS01082 Ribosomal protein L7Ae signature.RL7A_HALMA68-85  1H:67-84
15RIBOSOMAL_L14PS00049 Ribosomal protein L14 signature.RL14_HALMA71-97  1L:71-97
16RIBOSOMAL_L13PS00783 Ribosomal protein L13 signature.RL13_HALMA83-106  1K:83-106
17RIBOSOMAL_L1EPS00939 Ribosomal protein L1e signature.RL4_HALMA103-129  1E:103-129
18RIBOSOMAL_L15PS00475 Ribosomal protein L15 signature.RL15_HALMA108-138  1M:107-137
19RIBOSOMAL_L22PS00464 Ribosomal protein L22 signature.RL22_HALMA124-148  1S:123-147
20RIBOSOMAL_L32EPS00580 Ribosomal protein L32e signature.RL32_HALMA129-149  1Z:128-148
21RIBOSOMAL_L6_2PS00700 Ribosomal protein L6 signature 2.RL6_HALMA151-172  1G:150-171
22RIBOSOMAL_L2PS00467 Ribosomal protein L2 signature.RL2_HALMA188-199  1C:187-198
23RIBOSOMAL_L3PS00474 Ribosomal protein L3 signature.RL3_HALMA195-218  1D:194-217

(-) Exons   (0, 0)

(no "Exon" information available for 1M90)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain 1 from PDB  Type:PROTEIN  Length:73
                                                                                                          
               SCOP domains d1m901_ 1: Ribosomal protein L37ae                                        SCOP domains
               CATH domains 1m90100 1:10-82  [code=2.20.25.30, no name defined]                       CATH domains
               Pfam domains ------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhh...hhhhhhhhhhhhhhhhh...........eeeee..eeee.....eee.......hhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------- Transcript
                1m90 1   10 RTGRFGPRYGLKIRVRVADVEIKHKKKHKCPVCGFKKLKRAGTGIWMCGHCGYKIAGGCYQPETVAGKAVMKA   82
                                    19        29        39        49        59        69        79   

Chain 2 from PDB  Type:PROTEIN  Length:56
 aligned with RL37_HALMA | P32410 from UniProtKB/Swiss-Prot  Length:57

    Alignment length:56
                                    11        21        31        41        51      
          RL37_HALMA      2 TGAGTPSQGKKNTTTHTKCRRCGEKSYHTKKKVCSSCGFGKSAKRRDYEWQSKAGE   57
               SCOP domains d1m902_ 2: Ribosomal protein L37e                        SCOP domains
               CATH domains 1m90200 2:1-56  [code=2.20.25.30, no name defined]       CATH domains
               Pfam domains -Ribosomal_L37e-1m90201 2:2-56                           Pfam domains
         Sec.struct. author ...hhhhhh......eee......eeee....ee.............hhhhh.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---RIBOSOMAL_L37E      --------------------------------- PROSITE
                 Transcript -------------------------------------------------------- Transcript
                1m90 2    1 TGAGTPSQGKKNTTTHTKCRRCGEKSYHTKKKVCSSCGFGKSAKRRDYEWQSKAGE   56
                                    10        20        30        40        50      

Chain 3 from PDB  Type:PROTEIN  Length:46
 aligned with RL39_HALMA | P22452 from UniProtKB/Swiss-Prot  Length:50

    Alignment length:49
                                    11        21        31        41         
          RL39_HALMA      2 GKKSKATKKRLAKLDNQNSRVPAWVMLKTDREVQRNHKRRHWRRNDTDE   50
               SCOP domains d1m903_ 3: Ribosomal protein L3   9e              SCOP domains
               CATH domains 1m90300 3:1-49                                    CATH domains
               Pfam domains ------Ribosomal_L39-1m90301 3:7   -49             Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhh...hhhhhhhh..---............... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------RIBOSOMAL_L39E   ----- PROSITE
                 Transcript ------------------------------------------------- Transcript
                1m90 3    1 GKKSKATKKRLAKLDNQNSRVPAWVMLKTDE---RNHKRRHWRRNDTDE   49
                                    10        20        30|   |   40         
                                                         31  35              

Chain 4 from PDB  Type:PROTEIN  Length:92
 aligned with RL44E_HALMA | P32411 from UniProtKB/Swiss-Prot  Length:92

    Alignment length:92
                                    10        20        30        40        50        60        70        80        90  
         RL44E_HALMA      1 MQMPRRFNTYCPHCNEHQEHEVEKVRSGRQTGMKWIDRQRERNSGIGNDGKFSKVPGGDKPTKKTDLKYRCGECGKAHLREGWRAGRLEFQE   92
               SCOP domains d1m904_ 4: Ribosomal protein L44e                                                            SCOP domains
               CATH domains 1m90400 4:1-92  [code=3.10.450.80, no name defined]                                          CATH domains
               Pfam domains -------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eee.eeeeee....eeeeeeeee.........hhhhhhhhhhh....hhhhhh............eeeee.....ee..........eee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) -------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) -----------------------------------------------------------RIBOSOMAL_L4--------------------- PROSITE (3)
                 Transcript -------------------------------------------------------------------------------------------- Transcript
                1m90 4    1 MQMPRRFNTYCPHCNEHQEHEVEKVRSGRQTGMKWIDRQRERNSGIGNDGKFSKVPGGDKPTKKTDLKYRCGECGKAHLREGWRAGRLEFQE   92
                                    10        20        30        40        50        60        70        80        90  

Chain 5 from PDB  Type:RNA  Length:3
                                    
                1m90 5 9074 CCA 9076

Chain A from PDB  Type:RNA  Length:2754
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
                1m90 A   10 UAUGCCAGCUGGUGGAUUGCUCGGCUCAGGCGCUGAUGAAGGACGUGCCAAGCUGCGAUAAGCCAUGGGGAGCCGCACGGAGGCGAAGAACCAUGGAUUUCCGAAUGAGAAUCUCUAACAAUUGCUUCGCGCAAUGAGGAACCCCGAGAACUGAAACAUCUCAGUAUCGGGAGGAACAGAAAACGCAAUGUGAUGUCGUUAGUAACCGCGAGUGAACGCGAUACAGCCCAAACCGAAGCCCUCACGGGCAAUGUGGUGUCAGGGCUACCUCUCAUCAGCCGACCGUCUCGACGAAGUCUCUUGGAACAGAGCGUGAUACAGGGUGACAACCCCGUACUCGAGACCAGUACGACGUGCGGUAGUGCCAGAGUAGCGGGGGUUGGAUAUCCCUCGCGAAUAACGCAGGCAUCGACUGCGAAGGCUAAACACAACCUGAGACCGAUAGUGAACAAGUAGUGUGAACGAACGCUGCAAAGUACCCUCAGAAGGGAGGCGAAAUAGAGCAUGAAAUCAGUUGGCGAUCGAGCGACAGGGCAUACAAGGUCCCUCGACGAAUGACCGACGCGCGAGCGUCCAGUAAGACUCACGGGAAGCCGAUGUUCUGUCGUACGUUUUGAAAAACGAGCCAGGGAGUGUGUCUGCAUGGCAAGUCUAACCGGAGUAUCCGGGGAGGCACAGGGAAACCGACAUGGCCGCAGGGCUUGCCCGAGGGCCGCCGUCUUCAAGGGCGGGGAGCCAUGUGGACACGACCCGAAUCCGGACGAUCUACGCAUGGACAAGAUGAAGCGUGCCGAAAGGCACGUGGAAGUCUGUUAGAGUUGGUGUCCUACAAUACCCUCUCGUGAUCUAUGUGUAGGGGUGAAAGGCCCAUCGAGUCCGGCAACAGCUGGUUCCAAUCGAAACAUGUCGAAGCAUGACCUCCGCCGAGGUAGUCUGUGAGGUAGAGCGACCGAUUGGUCCUGUCAAACUCCAAACUUACAGACGCCGUUUGACGCGGGGAUUCCGGUGCGCGGGGUAAGCCUGUGUACCAGGAGGGGAACAACCCAGAGAUAGGUUAAGGUCCCCAAGUGUGGAUUAAGUGUAAUCCUCUGAAGGUGGUCUCGAGCCCUAGACAGCCGGGAGGUGAGCUUAGAAGCAGCUACCCUCUAAGAAAAGCGUAACAGCUUACCGGCCGAGGUUUGAGGCGCCCAAAAUGAUCGGGACUCAAAUCCACCACCGAGACCUGUCCGUACCACUCAUACUGGUAAUCGAGUAGAUUGGCGCUCUAAUUGGAUGGAAGUAGGGGUGAAAACUCCUAUGGACCGAUUAGUGACGAAAAUCCUGGCCAUAGUAGCAGCGAUAGUCGGGUGAGAACCCCGACGGCCUAAUGGAUAAGGGUUCCUCAGCACUGCUGAUCAGCUGAGGGUUAGCCGGUCCUAAGUCAUACCGCAACUCGACUAUGACGAAAUGGGAAACGGGUUAAUAUUCCCGUGCCACUAUGCAGUGAAAGUUGACGCCCUGGGGUCGAUCACGCUGGGCAUCGCCCAGUCGAACCGUCCAACUCCGUGGAAGCCGUAAUGGCAGGAAGCGGACGAACGGCGGCAUAGGGAAACGUGAUUCAACCUGGGGCCCAUGAAAAGACGAGCAUAGUGUCCGUACCGAGAACCGACACAGGUGUCCAUGGCGGCGAAAGCCAAGGCCUGUCGGGAGCAACCAACGUUAGGGAAUUCGGCAAGUUAGUCCCGUACCUUCGGAAGAAGGGAUGCCUGCUCCGGAACGGAGCAGGUCGCAGUGACUCGGAAGCUCGGACUGUCUAGUAACAACAUAGGUGACCGCAAAUCCGCAAGGACUCGUACGGUCACUGAAUCCUGCCCAGUGCAGGUAUCUGAACACCUCGUACAAGAGGACGAAGGACCUGUCAACGGCGGGGGUCUUAAGGUAGCGUAGUACCUUGCCGCAUCAGUAGCGGCUUGCAUGAAUGGAUUAACCAGAGCUUCACUGUCCCAACGUUGGGCCCGGUGAACUGUACAUUCCAGUGCGGAGUCUGGAGACACCCAGGGGGAAGCGAAGACCCUAUGGAGCUUUACUGCAGGCUGUCGCUGAGGACUCUCACUCCGGGAGGAGGACACCGAUAGCCGGGCAGUUUGACUGGGGCGGUACGCGCUCGAAAAGAUAUCGAGCGCGCCCUAUGGCUAUCUCAGCCGGGGACCCGGCGAAGAGUGCAAGAGCAAAAGAUAGCUUGACAGUGUUCUUCCCAACGAGGAACGCUGACGCGAAAGCGUGGUCUAGCGAACCAAUUAGCCUGCUUGAUGCGGGCAAUUGAUGACAGAAAAGCUACCCUAGGGAUAACAGAGUCGUCACUCGCAAGAGCACAUAUCGACCGAGUGGCUUGCUACCUCGAUGUCGGUUCCCUCCAUCCUGCCCGUGCAGAAGCGGGCAAGGGUGAGGUUGUUCGCCUAUUAAAGGAGGUCGUGAGCUGGGUUUAGACCGUCGUGAGACAGGUCGGCUGCUAUCUACUGGGUGUGUAGGUGUCUGACAAGAACGACCGUAUAGUACGAGAGGAACUACGGUUGGUGGCCACUGGUGUACCGGUUGUUCGAGAGAGCACGUGCCGGGUAGCCACGCCACACGGGGUAAGAGCUGAACGCAUCUAAGCUCGAAACCCACUUGGAAAAGAGACACCGCCGAGGUCCCGCGUACAAGACGCGGUCGAUAGACUCGGGGUGUGCGCGUCGAGGUAACGAGACGUUAAGCCCACGAGCACUAACAGACCAA 2914
                                    19        29        39        49        59        69        79        89        99       109       119     ||131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       601       611       621       631       641       651       661       671       681       691       701       711  ||   722       732       742       752       762       772       782       792       802       812       822       832       842       852       862       872       882       892       902       912       922       932       942       952       962      1000      1010      1020      1030      1040      1050      1060      1070      1080      1090      1100      1110      1120      1130      1140      1150      1160      1170      1180      1190      1200      1210      1220      1230      1240      1250      1260      1270      1280      1290      1300      1310      1320      1330      1340      1350      1360      1370      1380      1390      1400      1410      1420      1430      1440      1450      1460      1470      1480      1490      1500      1510      1520      1530      1540      1550      1561      1571      1581      1591      1601      1611      1621      1631      1641      1651      1661      1671      1681      1691      1701      1711      1721      1731      1741      1751      1761      1771      1781      1791      1801      1811      1821      1831      1841      1851      1861      1871      1881      1891      1901      1911      1921      1931      1941      1951|     1973      1983      1993      2003      2013      2023      2033      2043      2053      2063      2073      2083      2093      2103      2113      2123      2133  ||  2243      2253      2263      2273      2283      2293      2303      2313      2323      2333    ||2348      2358      2368      2378      2388      2398      2408      2418      2428      2438      2448      2458      2468      2478      2488      2498      2508      2518      2528      2538      2548      2558      2568      2578      2588      2598      2608      2618      2628      2638      2648      2658     |2670      2680      2690      2700      2710      2720      2730      2740      2750      2760      2770      2780      2790      2800      2810      2820      2830      2840      2850      2860      2870      2880      2890      2900      2910    
                                                                                                                                             125|                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       714|                                                                                                                                                                                                                                                           970|                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            1559|                                                                                                                                                                                                                                                                                                                                                                                                  1951|                                                                                                                                                                        2136|                                                                                                 2338|                                                                                                                                                                                                                                                                                                                            2664|                                                                                                                                                                                                                                                       
                                                                                                                                              128                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        716                                                                                                                                                                                                                                                            999                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             1561                                                                                                                                                                                                                                                                                                                                                                                                   1964                                                                                                                                                                         2237                                                                                                  2344                                                                                                                                                                                                                                                                                                                             2667                                                                                                                                                                                                                                                       

Chain B from PDB  Type:RNA  Length:122
                                                                                                                                                           
                1m90 B 3001 UUAGGCGGCCACAGCGGUGGGGUUGCCUCCCGUACCCAUCCCGAACACGGAAGAUAAGCCCACCAGCGUUCCGGGGAGUACUGGAGUGCGCGAGCCUCUGGGAAACCCGGUUCGCCGCCACC 3122
                                  3010      3020      3030      3040      3050      3060      3070      3080      3090      3100      3110      3120  

Chain C from PDB  Type:PROTEIN  Length:237
 aligned with RL2_HALMA | P20276 from UniProtKB/Swiss-Prot  Length:240

    Alignment length:237
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       
           RL2_HALMA      2 GRRIQGQRRGRGTSTFRAPSHRYKADLEHRKVEDGDVIAGTVVDIEHDPARSAPVAAVEFEDGDRRLILAPEGVGVGDELQVGVSAEIAPGNTLPLAEIPEGVPVCNVESSPGDGGKFARASGVNAQLLTHDRNVAVVKLPSGEMKRLDPQCRATIGVVAGGGRTDKPFVKAGNKHHKMKARGTKWPNVRGVAMNAVDHPFGGGGRQHPGKPKSISRNAPPGRKVGDIASKRTGRGG  238
               SCOP domains d1m90c2 C:1-90 N-terminal domain of ribosomal protein L2                                  d1m90c1 C:91-237 C-terminal domain of ribosomal protein L2                                                                                          SCOP domains
               CATH domains 1m90C02 C:1-78 Nucleic acid-binding proteins                                  ---1m90C01 C:82-159  [code=2.30.30.30, no name defined]                          1m90C03 C:160-237 Ribosomal protein L2, domain 3                               CATH domains
               Pfam domains ---------Ribosomal_L2-1m90C02 C:10-82                                             -----Ribosomal_L2_C-1m90C01 C:88-221                                                                                                       ---------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhh.hhhhh...............eeeeeeeee......eeeeeee....eeee..........eee...........eee.hhh....eee...................eeeee.....eeee.....eeee....eeee......hhhhh...hhhhhhhhhh.........hhhhh...................ee...........ee......... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RIBOSOMAL_L2--------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1m90 C    1 GRRIQGQRRGRGTSTFRAPSHRYKADLEHRKVEDGDVIAGTVVDIEHDPARSAPVAAVEFEDGDRRLILAPEGVGVGDELQVGVDAEIAPGNTLPLAEIPEGVPVCNVESSPGDGGKFARASGVNAQLLTHDRNVAVVKLPSGEMKRLDPQCRATIGVVGGGGRTDKPFVKAGNKHHKMKARGTKWPNVRGVAMNAVDHPFGGGGRQHPGKPKSISRNAPPGRKVGDIASKRTGRGG  237
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       

Chain D from PDB  Type:PROTEIN  Length:337
 aligned with RL3_HALMA | P20279 from UniProtKB/Swiss-Prot  Length:338

    Alignment length:337
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       
           RL3_HALMA      2 PQPSRPRKGSLGFGPRKRSTSETPRFNSWPSDDGQPGVQGFAGYKAGMTHVVLVNDEPNSPREGMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTLDVPEDHDPDAAEEQIRDAHEAGDLGDLRLITHTVPDAVPSVPKKKPDVMETRVGGGSVSDRLDHALDIVEDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPTVDGGFVNYGEVDGPYTLVKGSVPGPDKRLVRFRPAVRPNDQPRLDPEVRYVSNESNQG  338
               SCOP domains d1m90d_ D: Ribosomal protein L3                                                                                                                                                                                                                                                                                                                   SCOP domains
               CATH domains 1m90D03 D:1-38,D:207-257              1m90D01 D:39-77,D:189-206,D:258-337    1m90D02 D:78-188  [code=3.30.1430.10, no name defined]                                                         1m90D01           1m90D03 D:1-38,D:207-257                           1m90D01 D:39-77,D:189-206,D:258-337 Translation factors                          CATH domains
               Pfam domains --------------------------------------------Ribosomal_L3-1m90D01 D:45-312                                                                                                                                                                                                                                               ------------------------- Pfam domains
         Sec.struct. author ....................................ee..eeeeeeeeeeeee..............eeeeeeee...eeeeeeeeeeee..eeeeeeeee......hhhhh.......hhhhhhhhhhhhhhhh.eeeeeeeee.hhhhh.........eeeeeee..hhhhhhhhhhhhhhhh.eehhhhhh....eeeeeee.....eehhhhhhh....hhhhhhh........................ee....eeeeeeeeeeeeeee................eeeeeee.........eeeeee.............eeee....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RIBOSOMAL_L3            ------------------------------------------------------------------------------------------------------------------------ PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1m90 D    1 PQPSRPRKGSLGFGPRKRSTSETPRFNSWPSDDGQPGVQGFAGYKAGMTHVVLVNDEPNSPREGMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTLDVPEDHDPDAAEEQIRDAHEAGDLGDLRLITHTVPDAVPSVPKKKPDVMETRVGGGSVSDRLDHALDIVEDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPTVDGGFVNYGEVDGPYTLVKGSVPGPDKRLVRFRPAVRPNDQPRLDPEVRYVSNESNQG  337
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       

Chain E from PDB  Type:PROTEIN  Length:246
 aligned with RL4_HALMA | P12735 from UniProtKB/Swiss-Prot  Length:246

    Alignment length:246
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240      
           RL4_HALMA      1 MQATIYDLDGNTDGEVDLPDVFETPVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAESFGSGRGQAHVPKQDGRARRVPQAVKGRSAHPPKTEKDRSLDLNDKERQLAVRSALAATADADLVADRGHEFDRDEVPVVVSDDFEDLVKTQEVVSLLEALDVHADIDRADETKIKAGQGSARGRKYRRPASILFVTSDEPSTAARNLAGADVATASEVNTEDLAPGGAPGRLTVFTESALAEVAER  246
               SCOP domains d1m90e_ E: Ribosomal protein L4                                                                                                                                                                                                                        SCOP domains
               CATH domains 1m90E00 E:1-246  [code=3.40.1370.10, no name defined]                                                                                                                                                                                                  CATH domains
               Pfam domains ---------------Ribosomal_L4-1m90E01 E:16-246                                                                                                                                                                                                           Pfam domains
         Sec.struct. author .eeeee.....eeeeee.hhhhhh..hhhhhhhhhhhhhhh..............................ee..ee.........................hhhhhhhhhhhhhhhh.hhhhhhhh..........eee.hhhhhh.hhhhhhhhhhhh.hhhhhhhhh..ee..hhhhhhh..ee.....eeee....hhhhhh....eeee....hhhhhhhhhh....eeeehhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------RIBOSOMAL_L1E              --------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                1m90 E    1 MQATIYDLDGNTDGEVDLPDVFETPVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAESFGSGRGQAHVPKLDGRARRVPQAVKGRSAHPPKTEKDRSLDLNDKERQLAVRSALAATADADLVADRGHEFDRDEVPVVVSDDFEDLVKTQEVVSLLEALDVHADIDRADETKIKAGQGSARGRKYRRPASILFVTSDEPSTAARNLAGADVATASEVNTEDLAPGGAPGRLTVFTESALAEVAER  246
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240      

Chain F from PDB  Type:PROTEIN  Length:140
 aligned with RL5_HALMA | P14124 from UniProtKB/Swiss-Prot  Length:177

    Alignment length:165
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170     
           RL5_HALMA     11 FHEMREPRIEKVVVHMGIGHGGRDLANAEDILGEITGQMPVRTKAKRTVGEFDIREGDPIGAKVTLRDEMAEEFLQTALPLAELATSQFDDTGNFSFGVEEHTEFPSQEYDPSIGIYGLDVTVNLVRPGYRVAKRDKASRSIPTKHRLNPADAVAFIESTYDVEV  175
               SCOP domains d1m90f_ F: Ribosomal      protein L5                                                                                                                                  SCOP domains
               CATH domains 1m90F00 F:10-174  [c     ode=3.30.1440.10, no name defined]                                                                                                           CATH domains
               Pfam domains -Ribosomal_L5-1m90F0     1 F:11-64                     ---Ribosomal_L5_C-1m90F02 F:68-166                                                                    -------- Pfam domains
         Sec.struct. author .......eeeeeeee.....-----..hhhhhhhhhh...ee...................ee.ee.hhhhhhhhhhhhhhh............eee.--------------------.eeeeeee..hhhhhh..............hhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) --------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) --------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) -------------------------------RIBOSOMAL_L5     --------------------------------------------------------------------------------------------------------------------- PROSITE (4)
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1m90 F   10 FHEMREPRIEKVVVHMGIGH-----ANAEDILGEITGQMPVRTKAKRTVGEFDIREGDPIGAKVTLRDEMAEEFLQTALPLAELATSQFDDTGNFSFG--------------------LDVTVNLVRPGYRVAKRDKASRSIPTKHRLNPADAVAFIESTYDVEV  174
                                    19        29     |  39        49        59        69        79        89        99       | -         -       129       139       149       159       169     
                                              29    35                                                                     107                  128                                              

Chain G from PDB  Type:PROTEIN  Length:172
 aligned with RL6_HALMA | P14135 from UniProtKB/Swiss-Prot  Length:178

    Alignment length:172
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171  
           RL6_HALMA      2 PRVELEIPEDVDAEQDHLDITVEGDNGSVTRRLWYPDIDVSVDGDTVVIESDEDNAKTMSTIGTFQSHIENMFHGVTEGWEYGMEVFYSHFPMQVNVEGDEVVIENFLGEKAPRRTTIHGDTDVEIDGEELTVSGPDIEAVGQTAADIEQLTRINDKDVRVFQDGVYITRKP  173
               SCOP domains d1m90g1 G:1-79 Ribosomal protein L6                                            d1m90g2 G:80-172 Ribosomal protein L6                                                         SCOP domains
               CATH domains 1m90G02 G:1-79  [code=3.90.930.12, no name defined]                            1m90G01 G:80-172  [code=3.90.930.12, no name defined]                                         CATH domains
           Pfam domains (1) ------------------------------------------------------------------------------------------Ribosomal_L6-1m90G01 G:91-165                                              ------- Pfam domains (1)
           Pfam domains (2) ------------------------------------------------------------------------------------------Ribosomal_L6-1m90G02 G:91-165                                              ------- Pfam domains (2)
         Sec.struct. author .eeeee.....eeeee..eeeeee..eeeeee.....eeeeee..eeeeee...hhhhhhhhhhhhhhhhhhhhhhh..eeeeeeee......eeee...eeeeehhhhh...eeee.....eeeee..eeeeee.hhhhhhhhhhhhhhh.............eeeeee.. Sec.struct. author
                 SAPs(SNPs) -S--------------------S----------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------RIBOSOMAL_L6_2        - PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1m90 G    1 PRVELEIPEDVDAEQDHLDITVEGDNGSVTRRLWYPDIDVSVDGDTVVIESDEDNAKTMSTIGTFQSHIENMFHGVTEGWEYGMEVFYSHFPMQVNVEGDEVVIENFLGEKAPRRTTIHGDTDVEIDGEELTVSGPDIEAVGQTAADIEQLTRINDKDVRVFQDGVYITRKP  172
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170  

Chain H from PDB  Type:PROTEIN  Length:119
 aligned with RL7A_HALMA | P12743 from UniProtKB/Swiss-Prot  Length:120

    Alignment length:119
                                    11        21        31        41        51        61        71        81        91       101       111         
          RL7A_HALMA      2 PVYVDFDVPADLEDDALEALEVARDTGAVKKGTNETTKSIERGSAELVFVAEDVQPEEIVMHIPELADEKGVPFIFVEQQDDLGHAAGLEVGSAAAAVTDAGEADADVEDIADKVEELR  120
               SCOP domains d1m90h_ H: Ribosomal protein L7ae                                                                                       SCOP domains
               CATH domains 1m90H00 H:1-119  [code=3.30.1330.30, no name defined]                                                                   CATH domains
               Pfam domains -------------Ribosomal_L7Ae-1m90H01 H:14-108                                                                ----------- Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhhhhhhhh.eeehhhhhhhhhhhh....eeee.....hhhhhhhhhhhhh....eeee.hhhhhhhhh.......eeee.....hhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------RIBOSOMAL_L7AE    ----------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------- Transcript
                1m90 H    1 PVYVDFDVPADLEDDALEALEVARDTGAVKKGTNETTKSIERGSAELVFVAEDVQPEEIVMHIPELADEKGVPFIFVEQQDDLGHAAGLEVGSAAAAVTDAGAAATVLEEIADKVEELR  119
                                    10        20        30        40        50        60        70        80        90       100       110         

Chain I from PDB  Type:PROTEIN  Length:29
 aligned with RL10_HALMA | P15825 from UniProtKB/Swiss-Prot  Length:348

    Alignment length:62
                                    21        31        41        51        61        71  
          RL10_HALMA     12 IPEWKQEEVDAIVEMIESYESVGVVNIAGIPSRQLQDMRRDLHGTAELRVSRNTLLERALDD   73
               SCOP domains d1m90i_ I:                                                     SCOP domains
               CATH domains 1m90I00 I:12-73                                                CATH domains
               Pfam domains -------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhh---------------------------------hhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------- Transcript
                1m90 I   12 IPEWKQEEVDAIVEMIES---------------------------------RNTLLERALDD   73
                                    21       | -         -         -         - |      71  
                                            29                                63          

Chain J from PDB  Type:PROTEIN  Length:156
                                                                                                                                                                                             
               SCOP domains d1m90j_ J: Ribosomal protein L10e                                                                                                                            SCOP domains
               CATH domains 1m90J00 J:1-167  [code=3.90.1170.10, no name defined]                                                                                                        CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhh.........................eee.........eeeeeee...eeeehhhhhhhhhhhhh...........eeee.....eeeee..........eeeeeeeee....eeeeeee....hhhhhhhhhh......eeeee...... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                1m90 J    1 KPGAMYRNSSKPAYTRREYISGIPGKKIAQFDMGNNGAGPTYPAQVELVVEKPVQIRHNALEAARVAANRYVQNSGAAANYKFRIRKFPFHVIRENKDGMRAPFGKPVGTAARVHGANHIFIAWVNPDPNVEEAWRRAKMKVTPTINIDSSPAGNA  167
                                    10        20        30        40        50        60        70        80        90      |111       121       131       141       151       161      
                                                                                                                           97|                                                          
                                                                                                                           109                                                          

Chain K from PDB  Type:PROTEIN  Length:142
 aligned with RL13_HALMA | P29198 from UniProtKB/Swiss-Prot  Length:145

    Alignment length:142
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143  
          RL13_HALMA      4 AEFDADVIVDARDCIMGRVASQVAEQALDGETVAVVNAERAVITGREEQIVEKYEKRVDIGNDNGYFYPKRPDGIFKRTIRGMLPHKKQRGREAFESVRVYLGNPYDEDGEVLDGTSLDRLSNIKFVTLGEISETLGANKTW  145
               SCOP domains d1m90k_ K: Ribosomal protein L13                                                                                                               SCOP domains
               CATH domains 1m90K00 K:4-145  [code=3.90.1180.10, no name defined]                                                                                          CATH domains
               Pfam domains -----Ribosomal_L13-1m90K01 K:9-117                                                                                ---------------------------- Pfam domains
         Sec.struct. author ......eeee....hhhhhhhhhhhhhh....eeeehhhh.eee.hhhhhhhhhhhhhhh..........hhhhhhhhhhhh.....hhhhhhhhhheee..................hhhhh..eeehhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ---------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) -------------------------------------------------------------------------------RIBOSOMAL_L13           --------------------------------------- PROSITE (3)
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1m90 K    4 AEFDADVIVDARDCIMGRVASQVAEQALDGETVAVVNAERAVITGREEQIVEKYEKRVDIGNDNGYFYPKRPDGIFKRTIRGMLPHKKQRGREAFESVRVYLGNPYDEDGEVLDGTSLDRLSNIKFVTLGEISETLGANKTW  145
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143  

Chain L from PDB  Type:PROTEIN  Length:132
 aligned with RL14_HALMA | P22450 from UniProtKB/Swiss-Prot  Length:132

    Alignment length:132
                                    10        20        30        40        50        60        70        80        90       100       110       120       130  
          RL14_HALMA      1 MEALGADVTQGLEKGSLITCADNTGARELKVISVHGYSGTKNRHPKAGLGDKITVSVTKGTPEMRRQVLEAVVVRQRKPIRRPDGTRVKFEDNAAVIVDENEDPRGTELKGPIAREVAQRFGSVASAATMIV  132
               SCOP domains d1m90l_ L: Ribosomal protein L14                                                                                                     SCOP domains
               CATH domains 1m90L00 L:1-132 Ribosomal Protein L14;                                                                                               CATH domains
               Pfam domains ----------Ribosomal_L14-1m90L01 L:11-132                                                                                             Pfam domains
         Sec.struct. author ......ee...ee...eeee.....eeeeeeeee...........ee....eeeeeeeee.......eeeeeeee....ee.....eeee...eeeee..............ee.hhh..hhhhhh....ee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------RIBOSOMAL_L14  PDB: L:71-97----------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------ Transcript
                1m90 L    1 MEALGADVTQGLEKGSLITCADNTGARELKVISVHGYSGTKNRHPKAGLGDKITVSVTKGTPEMRRQVLEAVVVRQRKPIRRPDGTRVKFEDNAAVIVDENEDPRGTELKGPIAREVAQRFGSVASAATMIV  132
                                    10        20        30        40        50        60        70        80        90       100       110       120       130  

Chain M from PDB  Type:PROTEIN  Length:145
 aligned with RL15_HALMA | P12737 from UniProtKB/Swiss-Prot  Length:165

    Alignment length:150
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151
          RL15_HALMA      2 TSKKKRQRGSRTHGGGSHKNRRGAGHRGGRGDAGRDKHEFHNHEPLGKSGFKRPQKVQEEAATIDVREIDENVTLLAADDVAEVEDGGFRVDVRDVVEEADDADYVKVLGAGQVRHELTLIADDFSEGAREKVEGAGGSVELTDLGEERQ  151
               SCOP domains d1m90m_ M: Ribosomal protein L15 (L15p)                                                                                                                SCOP domains
               CATH domains 1m90M01 M:1-50                                    1m90M02 M:51-149  [code=3.100.10.     10, no name defined]                                         - CATH domains
               Pfam domains ---------------Ribosomal_L18e-1m90M01 M:16-143                                                                                                 ------- Pfam domains
         Sec.struct. author ..hhhhh...............hhhhhh.........................hhhhh..eeeeehhhhhhh...........-----.eee.hhh........eeeee.........eeee.eehhhhhhhhhhh..eeee........ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------------------------------------------RIBOSOMAL_L15  PDB: M:107-137  ------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                1m90 M    1 TSKKKRQRGSRTHGGGSHKNRRGAGHRGGRGDAGRDKHEFHNHEPLGKSGFKRPQKVQEEAATIDVREIDENVTLLAADDVAE-----FRVDVRDVVEEADDADYVKVLGAGQVRHELTLIADDFSEGAREKVEGAGGSVELTDLGEERQ  150
                                    10        20        30        40        50        60        70        80  |     90       100       110       120       130       140       150
                                                                                                             83    89                                                             

Chain N from PDB  Type:PROTEIN  Length:194
                                                                                                                                                                                                                                   
               SCOP domains d1m90n_ N: Ribosomal protein L15e                                                                                                                                                                  SCOP domains
               CATH domains 1m90N00 N:1-194 Ribosomal protein l15e                                                                                                                                                             CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhh..hhhhhhhhhhhhhhhh....eeee....hhhhhhhhh......eeeeeeeee.............hhhhh.........hhhhhhhhhhhhhh...eeeeeeeeee...eeeeeeeee............hhhhhhhhhhhhhhhh.hhhhhhhh...............hhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1m90 N    1 ARSAYSYIREAWKRPKEGQIAELMWHRMQEWRNEPAVVRIERPTRLDRARSLGYKAKQGIIVVRVAIRKGSSRRTRFNKGRRSKRMMVNRITRKKNIQRIAEERANRKFPNLRVLNSYSVGEDGRHKWHEVILIDPDHPAIKSDDQLSWISRTRHRLRTFRGLTSAGRRCRGLRGQGKGSEKVRPSLRVNGAKA  194
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190    

Chain O from PDB  Type:PROTEIN  Length:186
 aligned with RL18_HALMA | P14123 from UniProtKB/Swiss-Prot  Length:187

    Alignment length:186
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181      
          RL18_HALMA      2 ATGPRYKVPMRRRREARTDYHQRLRLLKSGKPRLVARKSNKHVRAQLVTLGPNGDDTLASAHSSDLAEYGWEAPTGNMPSAYLTGLLAGLRAQEAGVEEAVLDIGLNSPTPGSKVFAIQEGAIDAGLDIPHNDDVLADWQRTRGAHIAEYDEQLEEPLYSGDFDAADLPEHFDELRETLLDGDIEL  187
               SCOP domains d1m90o_ O: Ribosomal protein L18 (L18p)                                                                                                                                                    SCOP domains
               CATH domains 1m90O00 O:1-186  [code=3.30.420.100, no name defined]                                                                                                                                      CATH domains
               Pfam domains --------Ribosomal_L18p-1m90O01 O:9-129                                                                                           --------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhh...hhhhhhhhhhh...eeeeee....eeeeeee......eeeeeee.hhhhhhh......hhhhhhhhhhhhhhhhhhh.....eee.........hhhhhhhhhhhhh......hhhhh..hhhhhhhhhhhhhhh..............hhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                1m90 O    1 ATGPRYKVPMRRRREARTDYHQRLRLLKSGKPRLVARKSNKHVRAQLVTLGPNGDDTLASAHSSDLAEYGWEAPTGNMPSAYLTGLLAGLRAQEAGVEEAVLDIGLNSPTPGSKVFAIQEGAIDAGLDIPHNDDVLADWQRTRGAHIAEYDEQLEEPLYSGDFDAADLPEHFDELRETLLDGDIEL  186
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180      

Chain P from PDB  Type:PROTEIN  Length:115
 aligned with RL18E_HALMA | P12733 from UniProtKB/Swiss-Prot  Length:116

    Alignment length:115
                                    11        21        31        41        51        61        71        81        91       101       111     
         RL18E_HALMA      2 SKTNPRLSSLIADLKSAARSSGGAVWGDVAERLEKPRRTHAEVNLGRIERYAQEDETVVVPGKVLGSGVLQKDVTVAAVDFSGTAETKIDQVGEAVSLEQAIENNPEGSHVRVIR  116
               SCOP domains d1m90p_ P: Ribosomal protein L18e                                                                                   SCOP domains
               CATH domains 1m90P00 P:1-115  [code=3.100.10.10, no name defined]                                                                CATH domains
               Pfam domains ---------------------Ribosomal_L18e-1m90P01 P:22-99                                                ---------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhheeeehhhhhhhh....eeeeeeeee.........eeeeeeehhhhhhhhhhhheeeehhhhhhhh.....eee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ------------------------------RIBOSOMAL_L18E    ------------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------- Transcript
                1m90 P    1 SKTNPRLSSLIADLKSAARSSGGAVWGDVAERLEKPRRTHAEVNLGRIERYAQEDETVVVPGKVLGSGVLQKDVTVAAVDFSGTAETKIDQVGEAVSLEQAIENNPEGSHVRVIR  115
                                    10        20        30        40        50        60        70        80        90       100       110     

Chain Q from PDB  Type:PROTEIN  Length:143
 aligned with RL19E_HALMA | P14119 from UniProtKB/Swiss-Prot  Length:149

    Alignment length:143
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141   
         RL19E_HALMA      2 TDLSAQKRLAADVLDVGKNRVWFNPERQGDIADAITREDVRELVDEGAIQAKDKKGNSRGRARERQKKRAYGHQKGAGSRKGKAGARQNSKEDWESRIRAQRTKLRELRDEGTLSSSQYRDLYDKAGGGEFDSVADLERYIDA  144
               SCOP domains d1m90q_ Q: Ribosomal protein L19 (L19e)                                                                                                         SCOP domains
               CATH domains 1m90Q01 Q:1-55  [code=1.10.1650.10, no name defined]   1m90Q03 Q:56-88 Single Heli x bin1m90Q02 Q:89-143  [code=1.10.1200.60, no name defined]  CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhh..hhh.eee...hhhhhhh..hhhhhhhhhhh..eee.......hhhhhhhhhhhhh....hhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhh....hhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) -----RIBOSOMAL_L19E      ---------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1m90 Q    1 TDLSAQKRLAADVLDVGKNRVWFNPERQGDIADAITREDVRELVDEGAIQAKDKKGNSRGRARERQKKRAKGHQKGAGSRKGKAGARQNSKEDWESRIRAQRTKLRELRDEGTLSSSQYRDLYDKAGGGEFDSVADLERYIDA  143
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140   

Chain R from PDB  Type:PROTEIN  Length:95
 aligned with RL21_HALMA | P12734 from UniProtKB/Swiss-Prot  Length:96

    Alignment length:95
                                    11        21        31        41        51        61        71        81        91     
          RL21_HALMA      2 PSSNGPLEGTRGKLKNKPRDRGTSPPQRAVEEFDDGEKVHLKIDPSVPNGRFHPRFDGQTGTVEGKQGDAYKVDIVDGGKEKTIIVTAAHLRRQE   96
               SCOP domains d1m90r_ R: Ribosomal proteins L21e                                                              SCOP domains
               CATH domains 1m90R00 R:1-95 Myosin S1 fragment SH3-like barrel                                               CATH domains
               Pfam domains Ribosomal_L21e-1m90R01 R:1-95                                                                   Pfam domains
         Sec.struct. author ................hhhhh....hhhhhh......eeee...........hhhhh..eeeeeeee..eeeeeeee..eeeeeeehhh.eee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) -----------------------------------RIBOSOMAL_L21E            ---------------------------------- PROSITE (3)
                 Transcript ----------------------------------------------------------------------------------------------- Transcript
                1m90 R    1 PSSNGPLEGTRGKLKNKPRDRGTSPPQRAVEEFDDGEKVHLKIDPSVPNGRFHPRFDGQTGTVEGKQGDAYKVDIVDGGKEKTIIVTAAHLRRQE   95
                                    10        20        30        40        50        60        70        80        90     

Chain S from PDB  Type:PROTEIN  Length:150
 aligned with RL22_HALMA | P10970 from UniProtKB/Swiss-Prot  Length:155

    Alignment length:150
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151
          RL22_HALMA      2 GISYSVEADPDTTAKAMLRERQMSFKHSKAIAREIKGKTAGEAVDYLEAVIEGDQPVPFKQHNSGVGHKSKVDGWDAGRYPEKASKAFLDLLENAVGNADHQGFDGEAMTIKHVAAHKVGEQQGRKPRAMGRASAWNSPQVDVELILEEP  151
               SCOP domains d1m90s_ S: Ribosomal protein L22                                                                                                                       SCOP domains
               CATH domains 1m90S00 S:1-150 Ribosomal Protein L22; Chain A                                                                                                         CATH domains
               Pfam domains ---------------Ribosomal_L22-1m90S01 S:16-149                                                                                                        - Pfam domains
         Sec.struct. author ........hhh.eeeeeeeeee.hhhhhhhhhhhhh..hhhhhhhhhhhhhh....ee...................ee.hhhhhhhhhhhhhhhhhhhhh...hhhhheeeeeeeeeeeee..eee.hhh.eee..eeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE (2)
                PROSITE (3) --------------------------------------------------------------------------------------------------------------------------RIBOSOMAL_L22            --- PROSITE (3)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                1m90 S    1 GISYSVEADPDTTAKAMLRERQMSFKHSKAIAREIKGKTAGEAVDYLEAVIEGDQPVPFKQHNSGVGHKSKVDGWDAGRYPEKASKAFLDLLENAVGNADHQGFDGEAMTIKHVAAHKVGEQQGRKPRAMGRASAWNSPQVDVELILEEP  150
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150

Chain T from PDB  Type:PROTEIN  Length:81
 aligned with RL23_HALMA | P12732 from UniProtKB/Swiss-Prot  Length:85

    Alignment length:81
                                    11        21        31        41        51        61        71        81 
          RL23_HALMA      2 SWDVIKHPHVTEKAMNDMDFQNKLQFAVDDRASKGEVADAVEEQYDVTVEQVNTQNTMDGEKKAVVRLSEDDDAQEVASRI   82
               SCOP domains d1m90t_ T: Ribosomal protein L23                                                  SCOP domains
               CATH domains 1m90T00 T:1-81  [code=3.30.70.330, no name defined]                               CATH domains
               Pfam domains -Ribosomal_L23-1m90T01 T:2-81                                                     Pfam domains
         Sec.struct. author ....eeee..hhhhhhhhhhhheeeeee....hhhhhhhhhhhhhh..eeeeeeee.....eeeeeee....hhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) --------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) --------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) -------------------------------------------------------------RIBOSOMAL_L23   ---- PROSITE (4)
                 Transcript --------------------------------------------------------------------------------- Transcript
                1m90 T    1 SWDVIKHPHVTEKAMNDMDFQNKLQFAVDDRASKGEVADAVEEQYDVTVEQVNTQNTMDGEKKAVVRLSEDDDAQEVASRI   81
                                    10        20        30        40        50        60        70        80 

Chain U from PDB  Type:PROTEIN  Length:119
 aligned with RL24_HALMA | P10972 from UniProtKB/Swiss-Prot  Length:120

    Alignment length:119
                                    11        21        31        41        51        61        71        81        91       101       111         
          RL24_HALMA      2 SKQPDKQRKSQRRAPLHERHKQVRATLSADLREEYGQRNVRVNAGDTVEVLRGDFAGEEGEVINVDLDKAVIHVEDVTLEKTDGEEVPRPLDTSNVRVTDLDLEDEKREARLESEDDSA  120
               SCOP domains d1m90u_ U: Ribosomal proteins L24 (L24p)                                                                                SCOP domains
               CATH domains 1m90U00 U:1-119  [code=2.30.30.30, no name defined]                                                                     CATH domains
               Pfam domains -------------------------------------------KOW-1m90U01 U:44-75             -------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhh.hhhhhhhh.eeeehhhhhhhhh..eee.....eeee........eeeeeeee....eeee...eee.....eee...hhh.eeeee....hhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------RIBOSOMAL_L24     --------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------- Transcript
                1m90 U    1 SKQPDKQRKSQRRAPLHERHKQVRATLSADLREEYGQRNVRVNAGDTVEVLRGDFAGEEGEVINVDLDKAVIHVEDVTLEKTDGEEVPRPLDTSNVRVTDLDLEDEKREARLESEDDSA  119
                                    10        20        30        40        50        60        70        80        90       100       110         

Chain V from PDB  Type:PROTEIN  Length:53
 aligned with RL24E_HALMA | P14116 from UniProtKB/Swiss-Prot  Length:67

    Alignment length:53
                                    14        24        34        44        54   
         RL24E_HALMA      5 RECDYCGTDIEPGTGTMFVHKDGATTHFCSSKCENNADLGREARNLEWTDTAR   57
               SCOP domains d1m90v_ V: Ribosomal protein L24e                     SCOP domains
               CATH domains 1m90V00 V:4-56  [code=2.30.170.20, no name defined]   CATH domains
               Pfam domains Ribosomal_L24e-1m90V01 V:4-56                         Pfam domains
         Sec.struct. author ...............eeee.....eeee.hhhhhhhhhh..hhhhh....... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------- PROSITE (2)
                PROSITE (3) ----RIBOSOMAL_L24E    ------------------------------- PROSITE (3)
                 Transcript ----------------------------------------------------- Transcript
                1m90 V    4 RECDYCGTDIEPGTGTMFVHKDGATTHFCSSKCENNADLGREARNLEWTDTAR   56
                                    13        23        33        43        53   

Chain W from PDB  Type:PROTEIN  Length:65
 aligned with RL29_HALMA | P10971 from UniProtKB/Swiss-Prot  Length:71

    Alignment length:65
                                    11        21        31        41        51        61     
          RL29_HALMA      2 TVLHVQEIRDMTPAEREAELDDLKTELLNARAVQAAGGAPENPGRIKELRKAIARIKTIQGEEGD   66
               SCOP domains d1m90w_ W: Ribosomal protein L29 (L29p)                           SCOP domains
               CATH domains 1m90W00 W:1-65  [code=1.10.287.310, no name defined]              CATH domains
               Pfam domains ----Ribosomal_L29-1m90W01 W:5-63                               -- Pfam domains
         Sec.struct. author ...hhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ----------------------------------------------------------------- PROSITE (3)
                PROSITE (4) ----------------------------------------------------------------- PROSITE (4)
                PROSITE (5) -----------------------------------------RIBOSOMAL_L29  --------- PROSITE (5)
                 Transcript ----------------------------------------------------------------- Transcript
                1m90 W    1 TVLHVQEIRDMTPAEREAELDDLKTELLNARAVQAAGGAPENPGRIKELRKAIARIKTIQGEEGD   65
                                    10        20        30        40        50        60     

Chain X from PDB  Type:PROTEIN  Length:154
 aligned with RL30_HALMA | P14121 from UniProtKB/Swiss-Prot  Length:154

    Alignment length:154
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150    
          RL30_HALMA      1 MHALVQLRGEVNMHTDIQDTLEMLNIHHVNHCTLVPETDAYRGMVAKVNDFVAFGEPSQETLETVLATRAEPLEGDADVDDEWVAEHTDYDDISGLAFALLSEETTLREQGLSPTLRLHPPRGGHDGVKHPVKEGGQLGKHDTEGIDDLLEAMR  154
               SCOP domains d1m90x_ X: Archaeal L30 (L30a)                                                                                                                             SCOP domains
               CATH domains 1m90X01 X:1-57,X:114-154                                 1m90X02 X:58-113  [code=1.10.15.30, no name defined]    1m90X01 X:1-57,X:114-154                  CATH domains
               Pfam domains Ribosomal_L30-1m90X01 X:1-52                        ------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeee.......hhhhhhhhhhh......eeeee..hhhhhhhhhhhh..eeee..hhhhhhhhhhhhh.........hhhhhhhhh...hhhhhhhhhhh.............ee.............hhhhh...ee.hhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ---------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ---------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) -------------------RIBOSOMAL_L30  PDB: X:20-52      ------------------------------------------------------------------------------------------------------ PROSITE (4)
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1m90 X    1 MHALVQLRGEVNMHTDIQDTLEMLNIHHVNHCTLVPETDAYRGMVAKVNDFVAFGEPSQETLETVLATRAEPLEGDADVDDEWVAEHTDYDDISGLAFALLSEETTLREQGLSPTLRLHPPRGGHDGVKHPVKEGGQLGKHDTEGIDDLLEAMR  154
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150    

Chain Y from PDB  Type:PROTEIN  Length:82
 aligned with RL31_HALMA | P18138 from UniProtKB/Swiss-Prot  Length:92

    Alignment length:82
                                    17        27        37        47        57        67        77        87  
          RL31_HALMA      8 ERVVTIPLRDARAEPNHKRADKAMILIREHLAKHFSVDEDAVRLDPSINEAAWARGRANTPSKIRVRAARFEEEGEAIVEAE   89
               SCOP domains d1m90y_ Y: Ribosomal protein L31e                                                  SCOP domains
               CATH domains 1m90Y00 Y:7-88  [code=3.10.440.10, no name defined]                                CATH domains
               Pfam domains Ribosomal_L31e-1m90Y01 Y:7-87                                                    - Pfam domains
         Sec.struct. author .eeeeee.hhhhhhhhhhhhhhhhhhhhhhhhhhh..hhh.eeehhhhhhhhhh........eeeeeeeee....eeeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) -----------------------------------------RIBOSOMAL_L31E -------------------------- PROSITE (2)
                 Transcript ---------------------------------------------------------------------------------- Transcript
                1m90 Y    7 ERVVTIPLRDARAEPNHKRADKAMILIREHLAKHFSVDEDAVRLDPSINEAAWARGRANTPSKIRVRAARFEEEGEAIVEAE   88
                                    16        26        36        46        56        66        76        86  

Chain Z from PDB  Type:PROTEIN  Length:142
 aligned with RL32_HALMA | P12736 from UniProtKB/Swiss-Prot  Length:241

    Alignment length:142
                                   105       115       125       135       145       155       165       175       185       195       205       215       225       235  
          RL32_HALMA     96 TELQARGLTEKTPDLSDEDARLLTQRHRVGKPQFNRQDHHKKKRVSTSWRKPRGQLSKQRRGIKGKGDTVEAGFRSPTAVRGKHPSGFEEVRVHNVDDLEGVDGDTEAVRIASKVGARKRERIEEEAEDAGIRVLNPTYVEV  237
               SCOP domains d1m90z_ Z: Ribosomal protein L32e                                                                                                              SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -----------------------------Ribosomal_L32e-1m90Z01 Z:124-231                                                                            ----- Pfam domains
         Sec.struct. author .eeee..........hhhhhhhhhhhhhhh........................................hhhhh.............eeeee..hhhhh......eeeee....hhhhhhhhhhhhhhh........eeee Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ---------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ---------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) ---------------------------------RIBOSOMAL_L32E       ---------------------------------------------------------------------------------------- PROSITE (4)
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1m90 Z   95 TELQARGLTEKTPDLSDEDARLLTQRHRVGKPQFNRQDHHKKKRVSTSWRKPRGQLSKQRRGIKGKGDTVEAGFRSPTAVRGKHPSGFEEVRVHNVDDLEGVDGDTEAVRIASKVGARKRERIEEEAEDAGIRVLNPTYVEV  236
                                   104       114       124       134       144       154       164       174       184       194       204       214       224       234  

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (29, 30)

Asymmetric/Biological Unit
(-)
Fold: RL5-like (90)
(-)
Class: Peptides (792)

(-) CATH Domains  (32, 36)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (23, 25)

Asymmetric/Biological Unit
(-)
Clan: KOW (56)
(-)
Clan: OB (224)
(-)
Clan: RRM (206)
(-)
Clan: Ribo_L29 (45)
(-)
Clan: S11_L18p (67)
(-)
Clan: TRASH (61)

(-) Gene Ontology  (23, 225)

Asymmetric/Biological Unit(hide GO term definitions)
Chain 2   (RL37_HALMA | P32410)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
    GO:0008270    zinc ion binding    Interacting selectively and non-covalently with zinc (Zn) ions.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain 3   (RL39_HALMA | P22452)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain 4   (RL44E_HALMA | P32411)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0070180    large ribosomal subunit rRNA binding    Interacting selectively and non-covalently with the large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
    GO:0000049    tRNA binding    Interacting selectively and non-covalently with transfer RNA.
    GO:0008270    zinc ion binding    Interacting selectively and non-covalently with zinc (Zn) ions.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain C   (RL2_HALMA | P20276)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0015934    large ribosomal subunit    The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site).
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain D   (RL3_HALMA | P20279)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain E   (RL4_HALMA | P12735)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain F   (RL5_HALMA | P14124)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
    GO:0000049    tRNA binding    Interacting selectively and non-covalently with transfer RNA.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain G   (RL6_HALMA | P14135)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain H   (RL7A_HALMA | P12743)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0004526    ribonuclease P activity    Catalysis of the endonucleolytic cleavage of RNA, removing 5' extra nucleotides from tRNA precursor.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0090501    RNA phosphodiester bond hydrolysis    The RNA metabolic process in which the phosphodiester bonds between ribonucleotides are cleaved by hydrolysis.
    GO:0090502    RNA phosphodiester bond hydrolysis, endonucleolytic    The chemical reactions and pathways involving the hydrolysis of internal 3',5'-phosphodiester bonds in one or two strands of ribonucleotides.
    GO:0042254    ribosome biogenesis    A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits; includes transport to the sites of protein synthesis.
    GO:0001682    tRNA 5'-leader removal    Generation of the mature 5'-end of the tRNA, usually via an endonucleolytic cleavage by RNase P.
    GO:0008033    tRNA processing    The process in which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group.
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain I   (RL10_HALMA | P15825)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0070180    large ribosomal subunit rRNA binding    Interacting selectively and non-covalently with the large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
biological process
    GO:0042254    ribosome biogenesis    A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits; includes transport to the sites of protein synthesis.
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain K   (RL13_HALMA | P29198)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0015934    large ribosomal subunit    The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site).
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain L   (RL14_HALMA | P22450)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain M   (RL15_HALMA | P12737)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0015934    large ribosomal subunit    The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site).
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain O   (RL18_HALMA | P14123)
molecular function
    GO:0008097    5S rRNA binding    Interacting selectively and non-covalently with 5S ribosomal RNA, the smallest RNA constituent of a ribosome.
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain P   (RL18E_HALMA | P12733)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain Q   (RL19E_HALMA | P14119)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0070180    large ribosomal subunit rRNA binding    Interacting selectively and non-covalently with the large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain R   (RL21_HALMA | P12734)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain S   (RL22_HALMA | P10970)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0015934    large ribosomal subunit    The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site).
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain T   (RL23_HALMA | P12732)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain U   (RL24_HALMA | P10972)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0015934    large ribosomal subunit    The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site).
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain V   (RL24E_HALMA | P14116)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
    GO:0008270    zinc ion binding    Interacting selectively and non-covalently with zinc (Zn) ions.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain W   (RL29_HALMA | P10971)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain X   (RL30_HALMA | P14121)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0015934    large ribosomal subunit    The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site).
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small,