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(-) Description

Title :  STRUCTURE OF LARGE RIBOSOMAL SUBUNIT IN COMPLEX WITH VIRGINIAMYCIN M
 
Authors :  J. L. Hansen, P. B. Moore, T. A. Steitz
Date :  21 Nov 02  (Deposition) - 22 Jul 03  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.00
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,1,2,3,4
Keywords :  Ribosome, Virginiamycin M, Streptogramin, Antibiotic (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  J. Hansen, P. B. Moore, T. A. Steitz
Structures Of Five Antibiotics Bound At The Peptidyl Transferase Center Of The Large Ribosomal Subunit
J. Mol. Biol. V. 330 1061 2003
PubMed-ID: 12860128  |  Reference-DOI: 10.1016/S0022-2836(03)00668-5
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - 23S RIBOSOMAL RNA
    ChainsA
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Other DetailsCULTURED CELLS
 
Molecule 2 - 5S RIBOSOMAL RNA
    ChainsB
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Other DetailsCULTURED CELLS
 
Molecule 3 - 50S RIBOSOMAL PROTEIN L2P
    ChainsC
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Other DetailsCULTURED CELLS
    SynonymHMAL2, HL4
 
Molecule 4 - 50S RIBOSOMAL PROTEIN L3P
    ChainsD
    MutationYES
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Other DetailsCULTURED CELLS
    SynonymHMAL3, HL1
 
Molecule 5 - 50S RIBOSOMAL PROTEIN L4E
    ChainsE
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Other DetailsCULTURED CELLS
    SynonymHMAL4, HL6
 
Molecule 6 - 50S RIBOSOMAL PROTEIN L5P
    ChainsF
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Other DetailsCULTURED CELLS
    SynonymHMAL5, HL13
 
Molecule 7 - 50S RIBOSOMAL PROTEIN L6P
    ChainsG
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Other DetailsCULTURED CELLS
    SynonymHMAL6, HL10
 
Molecule 8 - 50S RIBOSOMAL PROTEIN L7AE
    ChainsH
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Other DetailsCULTURED CELLS
    SynonymHS6
 
Molecule 9 - ACIDIC RIBOSOMAL PROTEIN P0 HOMOLOG
    ChainsI
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Other DetailsCULTURED CELLS
    SynonymL10E, HMAL10
 
Molecule 10 - 50S RIBOSOMAL PROTEIN L10E
    ChainsJ
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Other DetailsCULTURED CELLS
 
Molecule 11 - 50S RIBOSOMAL PROTEIN L13P
    ChainsK
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Other DetailsCULTURED CELLS
    SynonymHMAL13
 
Molecule 12 - 50S RIBOSOMAL PROTEIN L14P
    ChainsL
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Other DetailsCULTURED CELLS
    SynonymHMAL14, HL27
 
Molecule 13 - 50S RIBOSOMAL PROTEIN L15P
    ChainsM
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Other DetailsCULTURED CELLS
    SynonymHMAL15, HL9
 
Molecule 14 - 50S RIBOSOMAL PROTEIN L15E
    ChainsN
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Other DetailsCULTURED CELLS
 
Molecule 15 - 50S RIBOSOMAL PROTEIN L18P
    ChainsO
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Other DetailsCULTURED CELLS
    SynonymHMAL18, HL12
 
Molecule 16 - 50S RIBOSOMAL PROTEIN L18E
    ChainsP
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Other DetailsCULTURED CELLS
    SynonymHL29, L19
 
Molecule 17 - 50S RIBOSOMAL PROTEIN L19E
    ChainsQ
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Other DetailsCULTURED CELLS
    SynonymHMAL19, HL24
 
Molecule 18 - 50S RIBOSOMAL PROTEIN L21E
    ChainsR
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Other DetailsCULTURED CELLS
    SynonymHL31
 
Molecule 19 - 50S RIBOSOMAL PROTEIN L22P
    ChainsS
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Other DetailsCULTURED CELLS
    SynonymHMAL22, HL23
 
Molecule 20 - 50S RIBOSOMAL PROTEIN L23P
    ChainsT
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Other DetailsCULTURED CELLS
    SynonymHMAL23, HL25, L21
 
Molecule 21 - 50S RIBOSOMAL PROTEIN L24P
    ChainsU
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Other DetailsCULTURED CELLS
    SynonymHMAL24, HL16, HL15
 
Molecule 22 - 50S RIBOSOMAL PROTEIN L24E
    ChainsV
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Other DetailsCULTURED CELLS
    SynonymHL21/HL22
 
Molecule 23 - 50S RIBOSOMAL PROTEIN L29P
    ChainsW
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Other DetailsCULTURED CELLS
    SynonymHMAL29, HL33
 
Molecule 24 - 50S RIBOSOMAL PROTEIN L30P
    ChainsX
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Other DetailsCULTURED CELLS
    SynonymHMAL30, HL20, HL16
 
Molecule 25 - 50S RIBOSOMAL PROTEIN L31E
    ChainsY
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Other DetailsCULTURED CELLS
    SynonymL34, HL30
 
Molecule 26 - 50S RIBOSOMAL PROTEIN L32E
    ChainsZ
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Other DetailsCULTURED CELLS
    SynonymHL5
 
Molecule 27 - 50S RIBOSOMAL PROTEIN L37AE
    Chains1
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Other DetailsCULTURED CELLS
 
Molecule 28 - 50S RIBOSOMAL PROTEIN L37E
    Chains2
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Other DetailsCULTURED CELLS
    SynonymL35E
 
Molecule 29 - 50S RIBOSOMAL PROTEIN L39E
    Chains3
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Other DetailsCULTURED CELLS
    SynonymHL39E, HL46E
 
Molecule 30 - 50S RIBOSOMAL PROTEIN L44E
    Chains4
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
    Other DetailsCULTURED CELLS
    SynonymLA, HLA

 Structural Features

(-) Chains, Units

  123456789101112131415161718192021222324252627282930
Asymmetric/Biological Unit ABCDEFGHIJKLMNOPQRSTUVWXYZ1234

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (6, 232)

Asymmetric/Biological Unit (6, 232)
No.NameCountTypeFull Name
1CD5Ligand/IonCADMIUM ION
2CL22Ligand/IonCHLORIDE ION
3K1Ligand/IonPOTASSIUM ION
4MG117Ligand/IonMAGNESIUM ION
5NA86Ligand/IonSODIUM ION
6VIR1Ligand/IonVIRGINIAMYCIN M1

(-) Sites  (232, 232)

Asymmetric Unit (232, 232)
No.NameEvidenceResiduesDescription
001AC1SOFTWAREG A:2102 , A A:2103 , C A:2104 , A A:2486 , C A:2487 , A A:2538 , U A:2620BINDING SITE FOR RESIDUE VIR A 9403
002AC2SOFTWAREG A:2482 , A A:2483 , C A:2533 , C A:2534 , HOH A:4011 , HOH A:8262 , HOH A:9577BINDING SITE FOR RESIDUE MG A 8001
003AC3SOFTWAREG A:627 , A A:2483 , C A:2534 , HOH A:4714 , HOH A:8240 , HOH A:8241BINDING SITE FOR RESIDUE MG A 8002
004AC4SOFTWAREA A:876 , G A:877 , G A:2623 , A A:2624 , HOH A:4061 , HOH A:9424 , HOH C:8537BINDING SITE FOR RESIDUE MG A 8003
005AC5SOFTWAREG A:456 , A A:459 , HOH A:3171 , HOH A:4178 , HOH A:8247 , HOH A:9451BINDING SITE FOR RESIDUE MG A 8004
006AC6SOFTWAREA A:1836 , U A:1838 , A A:1839 , HOH A:4007 , HOH A:8263 , HOH A:8264BINDING SITE FOR RESIDUE MG A 8005
007AC7SOFTWAREU A:821 , C A:822 , G A:854 , HOH A:3202 , HOH A:4013 , HOH A:4149BINDING SITE FOR RESIDUE MG A 8006
008AC8SOFTWAREU A:832 , A A:1839 , A A:1840 , HOH A:3748 , HOH A:8252 , HOH A:9410BINDING SITE FOR RESIDUE MG A 8007
009AC9SOFTWAREU A:919 , C A:2464 , A A:2465 , HOH A:4025 , HOH A:8256 , HOH A:8411BINDING SITE FOR RESIDUE MG A 8008
010BC1SOFTWAREU A:2610 , G A:2611 , A A:2612 , HOH A:4136 , HOH A:7808 , HOH A:8257 , HOH A:8258BINDING SITE FOR RESIDUE MG A 8009
011BC2SOFTWAREG A:836 , U A:2615 , HOH A:4236 , HOH A:9757 , GLN D:230 , HOH D:8526BINDING SITE FOR RESIDUE MG A 8010
012BC3SOFTWAREG A:824 , G A:854 , HOH A:4357 , HOH A:4681 , HOH A:4812 , HOH A:4918BINDING SITE FOR RESIDUE MG A 8011
013BC4SOFTWAREG A:28 , U A:1304 , HOH A:3031 , HOH A:3617 , HOH A:4043 , HOH A:8412 , HOH A:9443BINDING SITE FOR RESIDUE MG A 8012
014BC5SOFTWAREG A:877 , A A:2622 , G A:2623 , HOH A:4037 , HOH A:4050 , HOH A:8271 , HOH A:9423BINDING SITE FOR RESIDUE MG A 8013
015BC6SOFTWAREG A:2102 , G A:2537 , HOH A:4054 , HOH A:4556 , HOH A:8238 , HOH A:9436BINDING SITE FOR RESIDUE MG A 8014
016BC7SOFTWAREA A:844 , A A:1689 , HOH A:4017 , HOH A:8273 , HOH A:9408 , HOH A:9427BINDING SITE FOR RESIDUE MG A 8015
017BC8SOFTWAREA A:1504 , A A:1678 , C A:1679 , HOH A:4142 , HOH A:8265 , HOH A:8266BINDING SITE FOR RESIDUE MG A 8016
018BC9SOFTWAREG A:456 , HOH A:7772 , HOH A:8248 , HOH A:9809 , HOH E:8359 , HOH E:8363BINDING SITE FOR RESIDUE MG A 8017
019CC1SOFTWAREA A:1291 , G A:1292 , HOH A:3610 , HOH A:4009 , HOH A:7844 , HOH A:8413BINDING SITE FOR RESIDUE MG A 8018
020CC2SOFTWAREA A:2011 , HOH A:4543 , HOH A:7617 , HOH A:8267 , HOH A:8268 , HOH A:8269BINDING SITE FOR RESIDUE MG A 8019
021CC3SOFTWAREC A:1830 , HOH A:8251 , HOH A:8270 , HOH A:9523 , HOH A:9526 , HOH A:9598BINDING SITE FOR RESIDUE MG A 8020
022CC4SOFTWAREG A:2304 , HOH A:3353 , HOH A:4033 , HOH A:4034 , HOH A:8254 , HOH A:8255BINDING SITE FOR RESIDUE MG A 8021
023CC5SOFTWAREG A:2097 , G A:2540 , HOH A:4267 , HOH A:8259 , HOH A:9512 , HOH A:9853BINDING SITE FOR RESIDUE MG A 8022
024CC6SOFTWAREG A:2616 , G A:2617 , G A:2618 , HOH A:4023 , HOH A:4216 , HOH A:8275 , HOH A:8276BINDING SITE FOR RESIDUE MG A 8023
025CC7SOFTWAREA A:1381 , HOH A:5514 , HOH A:8414 , HOH Y:7830BINDING SITE FOR RESIDUE MG A 8024
026CC8SOFTWAREU A:1120 , G A:1121 , HOH A:4561 , HOH A:8277 , HOH A:8278 , HOH A:8415BINDING SITE FOR RESIDUE MG A 8025
027CC9SOFTWAREC A:2608 , G A:2609 , U A:2610 , HOH A:8279 , HOH A:8280 , HOH A:9787BINDING SITE FOR RESIDUE MG A 8026
028DC1SOFTWAREC A:240 , U A:268 , G A:269 , HOH A:4270 , HOH A:4409 , HOH A:4548 , HOH N:8656BINDING SITE FOR RESIDUE MG A 8027
029DC2SOFTWAREA A:1448 , U A:1677 , HOH A:4073 , HOH A:4094 , HOH A:4106 , HOH A:8283 , HOH A:9967BINDING SITE FOR RESIDUE MG A 8028
030DC3SOFTWAREA A:1502 , U A:1503 , A A:1504 , C A:1679 , HOH A:8284 , HOH A:8285 , HOH A:8286 , HOH A:8287BINDING SITE FOR RESIDUE MG A 8029
031DC4SOFTWAREU A:1748 , U A:1749 , HOH A:4035 , HOH A:8249 , HOH A:8250 , HOH A:8260BINDING SITE FOR RESIDUE MG A 8030
032DC5SOFTWAREU A:777 , C A:778 , HOH A:3666 , HOH A:8289 , HOH A:8290 , HOH A:8291 , NA A:8325BINDING SITE FOR RESIDUE MG A 8031
033DC6SOFTWAREU A:2115 , G A:2272 , HOH A:3380 , HOH A:4121 , HOH A:4184 , HOH A:4582 , HOH C:8640BINDING SITE FOR RESIDUE MG A 8032
034DC7SOFTWAREA A:1747 , U A:1748 , U A:1749 , G A:2585 , HOH A:3070 , HOH A:4212BINDING SITE FOR RESIDUE MG A 8033
035DC8SOFTWAREA A:2302 , A A:2303 , HOH A:4038 , HOH A:4165 , HOH A:5255 , HOH A:8292BINDING SITE FOR RESIDUE MG A 8034
036DC9SOFTWAREG A:1484 , HOH A:4111 , HOH A:8293 , HOH A:8294 , HOH A:8417 , HOH A:8418BINDING SITE FOR RESIDUE MG A 8035
037EC1SOFTWAREG A:956 , HOH A:4065 , HOH A:8295 , HOH A:8296 , HOH A:8297 , HOH A:9762BINDING SITE FOR RESIDUE MG A 8036
038EC2SOFTWAREA A:2553 , A A:2576 , HOH A:3524 , HOH A:3600 , HOH A:4044 , HOH A:8419 , HOH A:9481BINDING SITE FOR RESIDUE MG A 8037
039EC3SOFTWAREHOH A:4021 , HOH A:4045 , HOH A:4066 , HOH A:4068 , HOH A:8299 , HOH A:9678BINDING SITE FOR RESIDUE MG A 8038
040EC4SOFTWAREA A:114 , U A:115 , HOH A:3300 , HOH A:4363 , HOH A:5493 , HOH A:8300 , HOH A:8304BINDING SITE FOR RESIDUE MG A 8039
041EC5SOFTWAREU A:392 , HOH A:3083 , HOH A:4185 , HOH A:5034 , HOH A:8421 , HOH N:8657BINDING SITE FOR RESIDUE MG A 8040
042EC6SOFTWAREG A:196 , A A:227 , C A:228 , HOH A:4503 , HOH A:4593BINDING SITE FOR RESIDUE MG A 8041
043EC7SOFTWAREU A:1309 , U A:1346 , HOH A:4053 , HOH A:4808 , HOH A:8309 , HOH A:9832BINDING SITE FOR RESIDUE MG A 8042
044EC8SOFTWAREG A:816 , G A:817 , HOH A:3206 , HOH A:7797 , MG A:8106 , HOH A:8422BINDING SITE FOR RESIDUE MG A 8043
045EC9SOFTWAREC A:2048 , C A:2088 , A A:2089 , HOH A:3685 , GLY S:65 , HOH S:8593BINDING SITE FOR RESIDUE MG A 8044
046FC1SOFTWAREG A:1979 , HOH A:8312 , HOH A:8423 , HOH A:8424 , HOH A:8425BINDING SITE FOR RESIDUE MG A 8045
047FC2SOFTWAREG A:1794 , HOH A:7681 , HOH A:8426 , HOH A:8427BINDING SITE FOR RESIDUE MG A 8046
048FC3SOFTWAREA A:1098 , HOH A:3518 , HOH A:6658 , HOH A:8441BINDING SITE FOR RESIDUE MG A 8047
049FC4SOFTWAREA A:2746 , U A:2749 , G A:2750 , HOH A:6263 , HOH A:6649 , HOH A:8428 , HOH A:8464BINDING SITE FOR RESIDUE MG A 8048
050FC5SOFTWAREG A:2421 , U A:2422 , C A:2423 , HOH A:8429BINDING SITE FOR RESIDUE MG A 8049
051FC6SOFTWAREC A:2248 , HOH A:7702BINDING SITE FOR RESIDUE MG A 8050
052FC7SOFTWAREG A:641 , HOH A:4498 , HOH A:8322 , HOH A:8337BINDING SITE FOR RESIDUE MG A 8051
053FC8SOFTWAREU A:1125 , C A:1129 , HOH A:4019 , HOH A:4254 , HOH A:8443 , HOH A:9983 , G B:3092BINDING SITE FOR RESIDUE MG A 8052
054FC9SOFTWAREG A:471 , HOH A:3432 , HOH A:4786 , HOH A:6001 , HOH A:9601 , HOH A:9639BINDING SITE FOR RESIDUE MG A 8053
055GC1SOFTWAREC A:162 , U A:2276 , HOH A:8253 , HOH A:8343 , HOH A:8345 , HOH A:9828BINDING SITE FOR RESIDUE MG A 8054
056GC2SOFTWAREA A:2757 , HOH A:3372 , HOH A:4063 , HOH A:4371 , ASN D:335 , HOH D:8659BINDING SITE FOR RESIDUE MG A 8056
057GC3SOFTWAREU A:1883 , U A:2012 , G A:2013 , HOH A:5400 , GLN C:207BINDING SITE FOR RESIDUE MG A 8057
058GC4SOFTWAREG A:2013 , HOH A:4159 , HOH A:8346 , HOH A:8347 , HOH C:8641 , HOH C:8643BINDING SITE FOR RESIDUE MG A 8058
059GC5SOFTWAREG A:2618 , HOH A:4117 , HOH A:4446 , MG A:8085 , HOH A:8261 , HOH A:9442 , HOH A:9446BINDING SITE FOR RESIDUE MG A 8059
060GC6SOFTWAREG A:175 , U A:224 , G A:393 , HOH A:8348 , HOH A:8351 , HOH A:8369 , HOH A:9570BINDING SITE FOR RESIDUE MG A 8060
061GC7SOFTWAREA A:1369 , U A:2650 , HOH A:3211 , HOH A:8380 , HOH A:8383 , HOH A:8386BINDING SITE FOR RESIDUE MG A 8061
062GC8SOFTWAREG A:1489 , G A:1491 , HOH A:4028 , HOH A:4355 , HOH A:6562 , HOH A:9790BINDING SITE FOR RESIDUE MG A 8062
063GC9SOFTWAREHOH A:4573 , HOH A:7389 , HOH A:7814 , HOH A:8246 , HOH A:8395 , HOH A:8445BINDING SITE FOR RESIDUE MG A 8063
064HC1SOFTWAREU A:2277 , U A:2278 , G A:2471 , HOH A:4148 , HOH A:4156 , HOH A:9982BINDING SITE FOR RESIDUE MG A 8064
065HC2SOFTWAREC A:1872 , G A:1873 , HOH A:4740 , ASP C:26 , HOH C:8554BINDING SITE FOR RESIDUE MG A 8066
066HC3SOFTWAREA A:1845 , U A:1846 , G A:1884 , HOH A:8388 , ASN C:188BINDING SITE FOR RESIDUE MG A 8067
067HC4SOFTWAREA A:2568 , HOH A:3127 , HOH A:4147 , HOH A:5208 , HOH A:6612 , HOH A:8446BINDING SITE FOR RESIDUE MG A 8068
068HC5SOFTWAREA A:166 , G A:219 , HOH A:4213 , HOH A:5347 , HOH A:9524BINDING SITE FOR RESIDUE MG A 8070
069HC6SOFTWAREHOH A:4507 , HOH A:6440 , HOH A:7800 , HOH A:7936 , HOH A:8393 , HOH A:8394BINDING SITE FOR RESIDUE MG A 8071
070HC7SOFTWAREU A:954 , HOH A:3622 , HOH A:4392 , HOH A:7796 , HOH A:8392 , HOH A:8447BINDING SITE FOR RESIDUE MG A 8072
071HC8SOFTWAREA A:1286 , A A:1287 , HOH A:8389 , HOH A:8390 , HOH A:8448 , HOH X:7874BINDING SITE FOR RESIDUE MG A 8074
072HC9SOFTWAREA A:907 , A A:908 , HOH A:4032 , HOH A:4314 , HOH A:5325 , HOH A:8391BINDING SITE FOR RESIDUE MG A 8075
073IC1SOFTWAREHOH 3:7875 , HOH A:7233 , HOH A:8396 , HOH A:8397 , HOH A:8449 , HOH A:8450BINDING SITE FOR RESIDUE MG A 8076
074IC2SOFTWAREC A:880 , U A:883 , HOH A:4018 , HOH A:8398 , HOH A:8399 , HOH A:9638BINDING SITE FOR RESIDUE MG A 8077
075IC3SOFTWAREA A:165 , A A:167 , C A:168 , HOH A:4006 , HOH A:4012 , HOH A:4024BINDING SITE FOR RESIDUE MG A 8079
076IC4SOFTWAREA A:1684 , U A:1724 , HOH A:4597 , HOH A:4881 , HOH A:7066 , HOH A:8400 , HOH A:8452BINDING SITE FOR RESIDUE MG A 8080
077IC5SOFTWAREC A:1420 , C A:1421 , G A:1438 , HOH A:3004 , HOH A:4493BINDING SITE FOR RESIDUE MG A 8081
078IC6SOFTWAREA A:1437 , HOH A:5549 , HOH A:5633 , HOH A:8460 , HOH Q:220BINDING SITE FOR RESIDUE MG A 8082
079IC7SOFTWAREA A:1754 , HOH A:4102 , HOH A:4544 , HOH A:6744 , HOH A:8401 , HOH A:8453BINDING SITE FOR RESIDUE MG A 8083
080IC8SOFTWAREA A:1742 , HOH A:3146 , HOH A:4030 , HOH A:8402 , HOH A:9647 , HOH A:9768BINDING SITE FOR RESIDUE MG A 8084
081IC9SOFTWAREG A:2617 , G A:2618 , HOH A:4183 , HOH A:4748 , HOH A:4874 , MG A:8059 , HOH A:9442 , HOH A:9994BINDING SITE FOR RESIDUE MG A 8085
082JC1SOFTWAREA A:532 , U A:533 , HOH A:4129 , HOH A:4372 , HOH A:8403 , HOH A:8404BINDING SITE FOR RESIDUE MG A 8086
083JC2SOFTWAREA A:682 , G A:683 , HOH A:4072 , HOH A:8461BINDING SITE FOR RESIDUE MG A 8087
084JC3SOFTWAREG A:2540 , G A:2611 , HOH A:3436 , HOH A:4684 , NA A:8339 , HOH A:9468 , HOH A:9692BINDING SITE FOR RESIDUE MG A 8088
085JC4SOFTWAREC A:515 , A A:516 , U A:517 , G A:518 , HOH A:8405 , HOH A:8454 , HOH A:8455BINDING SITE FOR RESIDUE MG A 8089
086JC5SOFTWAREA A:2103 , U A:2478 , HOH A:4010 , HOH A:4193BINDING SITE FOR RESIDUE MG A 8090
087JC6SOFTWAREG A:918 , C A:2294 , HOH A:3714 , HOH A:6870 , HOH A:8406 , HOH A:9495 , HOH A:9937BINDING SITE FOR RESIDUE MG A 8091
088JC7SOFTWAREC A:1844 , HOH A:4040 , HOH A:4055 , HOH A:8456BINDING SITE FOR RESIDUE MG A 8092
089JC8SOFTWAREA A:1070 , G A:1071 , HOH A:3075 , HOH A:4046 , HOH A:4077 , HOH A:4118BINDING SITE FOR RESIDUE MG A 8093
090JC9SOFTWAREU A:1096 , C A:1257 , HOH A:8407 , HOH A:8457BINDING SITE FOR RESIDUE MG A 8094
091KC1SOFTWAREG A:1848 , G A:1849 , HOH A:4058 , HOH A:4095 , HOH A:4230 , HOH A:4262 , MG A:8116BINDING SITE FOR RESIDUE MG A 8096
092KC2SOFTWAREG A:863 , U A:864 , HOH A:3732 , HOH A:4067 , HOH A:4071 , HOH A:5939BINDING SITE FOR RESIDUE MG A 8097
093KC3SOFTWAREA A:907 , HOH A:3332 , HOH A:3761 , HOH A:4079 , HOH A:4144 , LYS Z:145 , HOH Z:8573BINDING SITE FOR RESIDUE MG A 8098
094KC4SOFTWAREA A:2612 , HOH A:3406 , HOH A:4062 , HOH A:4074BINDING SITE FOR RESIDUE MG A 8099
095KC5SOFTWAREG A:2080 , HOH A:4162 , HOH A:4640 , HOH A:5893 , HOH A:8408 , HOH A:8409BINDING SITE FOR RESIDUE MG A 8100
096KC6SOFTWAREC A:2281 , U A:2282 , HOH A:4143 , HOH A:5013BINDING SITE FOR RESIDUE MG A 8101
097KC7SOFTWAREA A:2434 , U A:2458 , HOH A:8465 , HOH A:9650BINDING SITE FOR RESIDUE MG A 8102
098KC8SOFTWAREA A:2577 , G A:2578 , G A:2579 , HOH A:8458BINDING SITE FOR RESIDUE MG A 8103
099KC9SOFTWAREC A:2104 , C A:2105 , HOH A:8242 , HOH A:8243 , HOH A:8244BINDING SITE FOR RESIDUE MG A 8104
100LC1SOFTWAREG A:817 , HOH A:3995 , HOH A:7797 , MG A:8043 , HOH A:8422 , HOH Q:192 , HOH Q:214BINDING SITE FOR RESIDUE MG A 8106
101LC2SOFTWAREC A:1105 , A A:1106 , A A:1107 , HOH A:8431 , HOH A:8432 , HOH A:8433 , HOH A:8434BINDING SITE FOR RESIDUE MG A 8107
102LC3SOFTWAREG A:2000 , HOH A:6484 , HOH A:7872 , HOH A:8436 , HOH A:8437 , HOH A:8438BINDING SITE FOR RESIDUE MG A 8108
103LC4SOFTWAREU A:903 , A A:1357 , HOH A:4324 , HOH A:5788 , HOH A:6418 , HOH A:9900BINDING SITE FOR RESIDUE MG A 8110
104LC5SOFTWAREG A:2609 , U A:2610 , HOH A:3689 , HOH A:4092 , HOH A:4116 , HOH A:5986 , HOH A:6136BINDING SITE FOR RESIDUE MG A 8111
105LC6SOFTWAREA A:187 , HOH A:4123 , HOH A:4163 , HOH A:9529 , HOH A:9728 , HOH A:9959BINDING SITE FOR RESIDUE MG A 8112
106LC7SOFTWAREA A:2112 , HOH A:4148 , HOH A:4322 , HOH A:6517 , HOH A:6788 , HOH A:9982BINDING SITE FOR RESIDUE MG A 8113
107LC8SOFTWARELYS 4:54 , HOH 4:8534 , A A:2430 , C A:2431 , HOH A:4064 , HOH A:4852 , HOH A:9745 , HOH A:9846BINDING SITE FOR RESIDUE MG A 8114
108LC9SOFTWAREHOH A:4676 , HOH A:4693 , HOH A:6798 , HOH A:6988 , HOH A:7117 , HOH C:8558 , HOH C:8644BINDING SITE FOR RESIDUE MG A 8115
109MC1SOFTWAREG A:1849 , U A:1850 , HOH A:4058 , HOH A:4262 , HOH A:7117 , MG A:8096 , HOH C:8558BINDING SITE FOR RESIDUE MG A 8116
110MC2SOFTWAREA A:1840 , C A:1841 , A A:2022 , HOH A:5027 , HOH A:6948 , HOH A:9622BINDING SITE FOR RESIDUE MG A 8117
111MC3SOFTWAREC A:162 , U A:163 , U A:172 , HOH A:8345 , ARG N:82BINDING SITE FOR RESIDUE K A 8202
112MC4SOFTWAREC A:1069 , G A:1072 , G A:1087 , HOH A:3558 , HOH A:3590 , HOH A:5360BINDING SITE FOR RESIDUE NA A 8301
113MC5SOFTWAREG A:1119 , U A:1120 , G A:1121 , U A:1122 , HOH A:4933 , HOH A:6070BINDING SITE FOR RESIDUE NA A 8302
114MC6SOFTWAREA A:643 , G A:644 , U A:904 , G A:1354 , ARG M:8BINDING SITE FOR RESIDUE NA A 8303
115MC7SOFTWAREA A:630 , A A:631 , HOH A:4484 , HOH A:5090 , HOH A:6173BINDING SITE FOR RESIDUE NA A 8305
116MC8SOFTWAREG A:2092 , G A:2093 , G A:2094 , A A:2649BINDING SITE FOR RESIDUE NA A 8306
117MC9SOFTWAREC A:40 , G A:41 , A A:442 , C A:443BINDING SITE FOR RESIDUE NA A 8307
118NC1SOFTWAREC A:1394 , U A:1432 , G A:1433 , U A:1724 , HOH A:3802BINDING SITE FOR RESIDUE NA A 8308
119NC2SOFTWAREA A:2577 , G A:2578 , G A:2579 , HOH A:4894BINDING SITE FOR RESIDUE NA A 8310
120NC3SOFTWAREG A:2524 , G A:2525 , HOH A:3970 , HOH A:5043 , HOH A:9584BINDING SITE FOR RESIDUE NA A 8311
121NC4SOFTWAREG A:2399 , HOH A:3341 , HOH A:4231 , HOH A:5512BINDING SITE FOR RESIDUE NA A 8313
122NC5SOFTWAREU A:2541 , U A:2607 , C A:2608 , HOH A:9729 , TRP D:242BINDING SITE FOR RESIDUE NA A 8314
123NC6SOFTWAREA A:165 , A A:166 , A A:167BINDING SITE FOR RESIDUE NA A 8315
124NC7SOFTWAREC A:896 , A A:897 , HOH A:6702 , HOH A:9433BINDING SITE FOR RESIDUE NA A 8316
125NC8SOFTWARETRP 3:42 , ASN 3:45 , HOH 3:4135 , G A:1416 , G A:1417 , HOH A:9674BINDING SITE FOR RESIDUE NA A 8317
126NC9SOFTWAREG A:2543 , G A:2544 , HOH A:3854 , HOH A:4328 , NA A:8320BINDING SITE FOR RESIDUE NA A 8318
127OC1SOFTWAREA A:2465 , G A:2466 , HOH A:4650 , HOH A:6433 , HOH A:9464 , ASP M:36BINDING SITE FOR RESIDUE NA A 8319
128OC2SOFTWAREG A:2543 , G A:2544 , G A:2611 , U A:2615 , HOH A:3137 , NA A:8318 , HOH A:9461 , HOH A:9490BINDING SITE FOR RESIDUE NA A 8320
129OC3SOFTWAREG A:836 , U A:837 , A A:1736 , A A:1737 , ARG D:229BINDING SITE FOR RESIDUE NA A 8321
130OC4SOFTWAREG A:885 , A A:2112 , G A:2113 , C A:2475 , C A:2476 , HOH A:4868BINDING SITE FOR RESIDUE NA A 8323
131OC5SOFTWAREC A:130 , U A:146 , G A:147 , HOH A:4523 , HOH A:7537 , HOH A:9886BINDING SITE FOR RESIDUE NA A 8324
132OC6SOFTWAREA A:776 , U A:777 , U A:779 , HOH A:3019 , HOH A:3666 , MG A:8031 , HOH A:8152BINDING SITE FOR RESIDUE NA A 8325
133OC7SOFTWAREG A:1971 , G A:2009 , A A:2010 , U A:2012BINDING SITE FOR RESIDUE NA A 8326
134OC8SOFTWAREU A:821 , C A:853 , G A:854 , U A:1831 , HOH A:3594 , HOH A:9440BINDING SITE FOR RESIDUE NA A 8327
135OC9SOFTWAREG A:56 , A A:59 , A A:60 , G A:61 , HOH A:5605 , HOH A:6865BINDING SITE FOR RESIDUE NA A 8328
136PC1SOFTWAREG A:66 , U A:107 , U A:108BINDING SITE FOR RESIDUE NA A 8329
137PC2SOFTWAREG A:140 , C A:141 , G A:142 , HOH A:9632BINDING SITE FOR RESIDUE NA A 8330
138PC3SOFTWAREHOH 4:8506 , U A:170 , C A:171 , C A:218 , G A:219 , G A:221BINDING SITE FOR RESIDUE NA A 8331
139PC4SOFTWAREG A:386 , G A:387 , G A:388 , C A:401 , U A:402 , HOH A:7456BINDING SITE FOR RESIDUE NA A 8332
140PC5SOFTWAREC A:1894 , U A:1897 , G A:1898 , U A:1939BINDING SITE FOR RESIDUE NA A 8333
141PC6SOFTWAREC A:1894 , A A:1895 , G A:1896 , U A:1897 , HOH A:5639BINDING SITE FOR RESIDUE NA A 8334
142PC7SOFTWAREG A:622 , U A:623 , A A:628 , A A:630 , HOH A:3264BINDING SITE FOR RESIDUE NA A 8335
143PC8SOFTWAREG A:1706 , G A:1707 , HOH A:3315 , HOH A:5727 , HOH A:7730 , HOH A:8179BINDING SITE FOR RESIDUE NA A 8336
144PC9SOFTWAREU A:2659 , G A:2660 , VAL S:72 , TRP S:75 , HOH S:8516 , HOH S:8527BINDING SITE FOR RESIDUE NA A 8338
145QC1SOFTWAREG A:2540 , G A:2611 , G A:2616 , U A:2645 , HOH A:3419 , HOH A:4684 , MG A:8088BINDING SITE FOR RESIDUE NA A 8339
146QC2SOFTWAREU A:1740 , U A:1741 , G A:2033 , HOH A:7204BINDING SITE FOR RESIDUE NA A 8340
147QC3SOFTWAREG A:681 , A A:682 , G A:683BINDING SITE FOR RESIDUE NA A 8341
148QC4SOFTWAREG A:891 , G A:892 , C A:893 , HOH A:6012 , HOH A:6655BINDING SITE FOR RESIDUE NA A 8342
149QC5SOFTWAREU A:2663 , A A:2811 , A A:2812 , A A:2816 , G A:2817 , HOH A:9621BINDING SITE FOR RESIDUE NA A 8344
150QC6SOFTWAREA A:914 , C A:915 , C A:1043 , C A:1044 , G A:1045BINDING SITE FOR RESIDUE NA A 8349
151QC7SOFTWAREU A:623 , U A:624 , G A:901 , HOH A:7342 , HOH A:8239BINDING SITE FOR RESIDUE NA A 8350
152QC8SOFTWAREA A:955 , HOH A:6992 , C B:3081 , U B:3082BINDING SITE FOR RESIDUE NA A 8352
153QC9SOFTWAREA A:1040 , G A:1295 , A A:1296 , HOH A:5264 , GLY M:14 , HOH M:8515BINDING SITE FOR RESIDUE NA A 8353
154RC1SOFTWAREU A:768 , C A:769 , G A:2111 , A A:2112 , HOH A:5205BINDING SITE FOR RESIDUE NA A 8354
155RC2SOFTWAREG A:1119 , C A:1243 , HOH A:5198 , THR K:47BINDING SITE FOR RESIDUE NA A 8355
156RC3SOFTWAREC A:920 , U A:2278 , G A:2279 , A A:2463 , A A:2467 , HOH A:9850BINDING SITE FOR RESIDUE NA A 8356
157RC4SOFTWAREG A:941 , U A:942 , C A:1023 , G A:1024 , C A:1025 , HOH A:6661BINDING SITE FOR RESIDUE NA A 8357
158RC5SOFTWAREG A:2094 , G A:2611 , HOH A:4136 , HOH A:4267 , HOH A:7808 , HOH A:8274 , HOH A:9731 , HOH A:9880BINDING SITE FOR RESIDUE NA A 8358
159RC6SOFTWAREG A:898 , A A:922 , A A:923 , G A:924 , U A:2109BINDING SITE FOR RESIDUE NA A 8359
160RC7SOFTWAREA A:453 , U A:454 , C A:478 , G A:479 , HOH A:6344BINDING SITE FOR RESIDUE NA A 8360
161RC8SOFTWAREU A:837 , HOH A:4979 , HOH A:5294 , HOH A:7719 , GLN D:230BINDING SITE FOR RESIDUE NA A 8361
162RC9SOFTWAREA A:167 , C A:168 , G A:2110 , G A:2111 , U A:2277 , HOH A:5698BINDING SITE FOR RESIDUE NA A 8362
163SC1SOFTWAREU A:1359 , C A:1360 , GLY E:66BINDING SITE FOR RESIDUE NA A 8363
164SC2SOFTWAREG A:636 , U A:2057 , G A:2058 , HOH A:3209 , HOH A:9986BINDING SITE FOR RESIDUE NA A 8364
165SC3SOFTWAREU A:391 , U A:392 , U A:398 , C A:399 , LYS N:193 , ALA N:194BINDING SITE FOR RESIDUE NA A 8365
166SC4SOFTWAREG A:544 , G A:545 , G A:610 , U A:611 , U A:612 , HOH A:3276 , HOH A:4217 , HOH A:4278BINDING SITE FOR RESIDUE NA A 8366
167SC5SOFTWAREG A:464 , G A:475 , HOH A:3221 , HOH A:4993 , ARG E:55 , HOH E:8388BINDING SITE FOR RESIDUE NA A 8367
168SC6SOFTWAREG A:798 , C A:799 , G A:814 , U A:815 , HOH A:4282BINDING SITE FOR RESIDUE NA A 8368
169SC7SOFTWAREG A:1832 , HOH A:4497 , HOH A:9506BINDING SITE FOR RESIDUE NA A 8370
170SC8SOFTWAREG A:2491 , U A:2492 , G A:2529 , HOH A:3020BINDING SITE FOR RESIDUE NA A 8371
171SC9SOFTWAREU A:919 , G A:921 , G A:924 , HOH A:9670BINDING SITE FOR RESIDUE NA A 8372
172TC1SOFTWAREG A:1576 , U A:1577 , G A:1618 , G A:1619 , HOH A:4075BINDING SITE FOR RESIDUE NA A 8373
173TC2SOFTWAREC A:195 , G A:196 , A A:415 , G A:416BINDING SITE FOR RESIDUE NA A 8374
174TC3SOFTWAREG A:868 , G A:869 , A A:886 , G A:887 , HOH A:4299BINDING SITE FOR RESIDUE NA A 8375
175TC4SOFTWAREA A:632 , C A:633 , U A:2535 , C A:2536 , A A:2538 , U A:2539 , HOH A:4042 , HOH A:5244BINDING SITE FOR RESIDUE NA A 8376
176TC5SOFTWAREG A:911 , U A:1293 , A A:1294 , G A:1295 , HOH A:6731BINDING SITE FOR RESIDUE NA A 8377
177TC6SOFTWAREC A:762 , G A:902 , U A:903 , HOH A:3598 , HIS M:18 , HOH M:8533 , HOH M:8555BINDING SITE FOR RESIDUE NA A 8378
178TC7SOFTWAREU A:831 , U A:832 , G A:833 , HOH A:4109 , HOH A:4816BINDING SITE FOR RESIDUE NA A 8379
179TC8SOFTWAREG A:2585 , U A:2586 , U A:2587 , G A:2592 , HOH A:4086 , HOH A:7458 , HOH A:9727BINDING SITE FOR RESIDUE NA A 8381
180TC9SOFTWAREG A:2772 , G A:2773 , HOH A:4759BINDING SITE FOR RESIDUE NA A 8382
181UC1SOFTWAREC A:197BINDING SITE FOR RESIDUE NA A 8384
182UC2SOFTWAREG A:1077 , A A:1079 , HOH A:8172BINDING SITE FOR RESIDUE NA A 8385
183UC3SOFTWAREG A:1452 , G A:1676BINDING SITE FOR RESIDUE CL A 8503
184UC4SOFTWAREG A:201 , HOH A:5297BINDING SITE FOR RESIDUE CL A 8505
185UC5SOFTWAREC A:2388 , HOH A:3551 , PHE R:52 , HIS R:53 , PHE R:56BINDING SITE FOR RESIDUE CL A 8511
186UC6SOFTWAREG A:1299 , G A:1300 , A A:1329 , HOH A:5049BINDING SITE FOR RESIDUE CL A 8513
187UC7SOFTWAREG A:644 , HIS M:13BINDING SITE FOR RESIDUE CL A 8514
188UC8SOFTWAREA A:1597 , A A:1598 , G A:1646BINDING SITE FOR RESIDUE CL A 8515
189UC9SOFTWAREG A:1119 , C A:1243 , GLN K:52 , LYS K:56BINDING SITE FOR RESIDUE CL A 8516
190VC1SOFTWAREG A:1072 , G A:1087 , A A:1291BINDING SITE FOR RESIDUE CL A 8522
191VC2SOFTWAREG B:3021 , U B:3055 , A B:3056 , A B:3057 , HOH B:7361BINDING SITE FOR RESIDUE MG B 8095
192VC3SOFTWAREHOH B:1982 , C B:3040BINDING SITE FOR RESIDUE NA B 8351
193VC4SOFTWAREG B:3021 , G B:3022 , U B:3055 , A B:3057 , G B:3058 , HOH B:7361BINDING SITE FOR RESIDUE NA B 8383
194VC5SOFTWAREHOH A:4367 , HOH C:8522 , HOH C:8541 , HOH C:8555 , HOH C:8609 , HOH C:8642BINDING SITE FOR RESIDUE MG C 8065
195VC6SOFTWAREARG 1:13 , PHE 1:14 , LYS C:171 , ASN C:174 , HOH C:8639BINDING SITE FOR RESIDUE MG C 8105
196VC7SOFTWAREA A:2633 , PHE C:201 , GLY C:202 , GLY C:203 , HIS C:208 , HOH C:8561 , HOH C:8608BINDING SITE FOR RESIDUE NA C 8345
197VC8SOFTWARELYS C:178BINDING SITE FOR RESIDUE CL C 8509
198VC9SOFTWAREHOH A:4153 , HOH A:4190 , HOH A:8204 , HOH A:8444 , HOH D:8658BINDING SITE FOR RESIDUE MG D 8055
199WC1SOFTWAREHOH A:3042 , ARG D:223 , LYS D:224BINDING SITE FOR RESIDUE CL D 8519
200WC2SOFTWAREASP E:45 , THR E:94 , LYS E:96 , HOH E:8310BINDING SITE FOR RESIDUE NA E 8304
201WC3SOFTWAREA A:1133 , G A:1134 , LYS J:150 , VAL J:153 , THR J:154 , PRO J:155BINDING SITE FOR RESIDUE NA J 8309
202WC4SOFTWAREASP J:109 , ARG J:112BINDING SITE FOR RESIDUE NA J 8322
203WC5SOFTWAREHOH A:6145 , HOH A:9879 , ARG K:60 , VAL K:61 , ILE K:63 , TYR K:69BINDING SITE FOR RESIDUE NA K 8346
204WC6SOFTWAREASN K:126 , ILE K:127 , LYS K:128 , HOH K:4038 , HOH K:4193BINDING SITE FOR RESIDUE CL K 8501
205WC7SOFTWAREPRO K:88 , HIS K:89 , LYS K:90BINDING SITE FOR RESIDUE CL K 8502
206WC8SOFTWAREHOH A:6145 , ASN K:65 , TYR K:69BINDING SITE FOR RESIDUE CL K 8521
207WC9SOFTWAREHOH A:4631 , HOH A:6431 , ASN L:42 , HOH L:1797 , HOH L:2121 , HOH L:7871BINDING SITE FOR RESIDUE MG L 8069
208XC1SOFTWAREG A:2582 , A A:2596 , HOH A:5490 , LYS L:14 , ILE L:32 , SER L:33BINDING SITE FOR RESIDUE CL L 8512
209XC2SOFTWAREARG M:27 , GLY M:28 , GLY M:29 , GLY M:31 , ALA M:33 , GLU M:39 , HOH M:8594BINDING SITE FOR RESIDUE NA M 8380
210XC3SOFTWAREA A:693 , LYS M:52 , ARG M:53BINDING SITE FOR RESIDUE CL M 8510
211XC4SOFTWAREASN N:106 , PHE N:109 , PRO N:110 , LEU N:112 , HOH N:8633BINDING SITE FOR RESIDUE NA N 8347
212XC5SOFTWAREASN N:106 , ARG N:113 , VAL N:114 , LEU N:157 , ARG N:158 , THR N:159BINDING SITE FOR RESIDUE CL N 8518
213XC6SOFTWARELYS F:146 , ARG O:37 , LYS O:38 , ASN O:107BINDING SITE FOR RESIDUE CL O 8507
214XC7SOFTWAREHIS P:40 , HOH P:5322BINDING SITE FOR RESIDUE CD P 8405
215XC8SOFTWAREHOH A:7412 , ASN P:44BINDING SITE FOR RESIDUE CL P 8508
216XC9SOFTWAREASP R:20 , GLY R:22 , SER R:24 , SER R:46 , HOH R:1795 , HOH R:5427BINDING SITE FOR RESIDUE NA R 8348
217YC1SOFTWAREHOH A:6306 , SER S:70 , VAL S:72 , HOH S:8525 , HOH S:8527BINDING SITE FOR RESIDUE NA S 8337
218YC2SOFTWAREU A:12 , LYS S:60 , GLN S:61 , ASN S:63BINDING SITE FOR RESIDUE NA S 8386
219YC3SOFTWARELYS S:118BINDING SITE FOR RESIDUE CL S 8506
220YC4SOFTWAREHIS T:7 , GLU T:61BINDING SITE FOR RESIDUE NA T 8312
221YC5SOFTWAREGLN U:37 , ARG U:111 , LEU U:112 , SER U:114 , ASP U:117BINDING SITE FOR RESIDUE MG U 8073
222YC6SOFTWAREU A:308 , U A:335 , C A:342 , SER U:94 , ASN U:95 , HOH U:1124BINDING SITE FOR RESIDUE NA U 8343
223YC7SOFTWARECYS V:6 , CYS V:9 , CYS V:36BINDING SITE FOR RESIDUE CD V 8401
224YC8SOFTWAREHIS Z:133 , LYS Z:136 , LYS Z:137 , VAL Z:139 , HOH Z:8564 , HOH Z:8586 , HOH Z:8620BINDING SITE FOR RESIDUE MG Z 8109
225YC9SOFTWAREC A:594 , U A:595 , ARG Z:115 , HOH Z:8559BINDING SITE FOR RESIDUE CL Z 8517
226ZC1SOFTWAREG A:1269 , HOH A:5325 , ARG Z:169BINDING SITE FOR RESIDUE CL Z 8520
227ZC2SOFTWARECYS 1:39 , CYS 1:42 , CYS 1:57 , CYS 1:60BINDING SITE FOR RESIDUE CD 1 8403
228ZC3SOFTWARECYS 2:19 , CYS 2:22 , CYS 2:34 , CYS 2:37BINDING SITE FOR RESIDUE CD 2 8402
229ZC4SOFTWAREGLY 4:45 , GLY 4:47 , ASP 4:49 , HOH 4:8576 , HOH A:4356 , HOH A:8451BINDING SITE FOR RESIDUE MG 4 8078
230ZC5SOFTWAREARG 4:42 , HOH 4:8544 , U A:391 , U A:392 , A A:395 , HOH A:6961BINDING SITE FOR RESIDUE NA 4 8369
231ZC6SOFTWARECYS 4:11 , CYS 4:14 , CYS 4:71 , CYS 4:74BINDING SITE FOR RESIDUE CD 4 8404
232ZC7SOFTWARELYS 4:24 , ASP 4:66 , LEU 4:67BINDING SITE FOR RESIDUE CL 4 8504

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1N8R)

(-) Cis Peptide Bonds  (6, 6)

Asymmetric/Biological Unit
No.Residues
1Trp C:186 -Pro C:187
2Gly D:14 -Pro D:15
3Asn D:243 -Pro D:244
4Val E:136 -Pro E:137
5Gln H:55 -Pro H:56
6Arg N:184 -Pro N:185

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (2, 2)

Asymmetric/Biological Unit (2, 2)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_RL6_HALMA_001 *R3SRL6_HALMA  ---  ---GR2S
2UniProtVAR_RL6_HALMA_002 *E24SRL6_HALMA  ---  ---GE23S
   * ID not provided by source

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (23, 23)

Asymmetric/Biological Unit (23, 23)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1RIBOSOMAL_L37EPS01077 Ribosomal protein L37e signature.RL37_HALMA5-24  12:4-23
2RIBOSOMAL_L19EPS00526 Ribosomal protein L19e signature.RL19E_HALMA7-26  1Q:6-25
3RIBOSOMAL_L24EPS01073 Ribosomal protein L24e signature.RL24E_HALMA9-26  1V:8-25
4RIBOSOMAL_L30PS00634 Ribosomal protein L30 signature.RL30_HALMA20-52  1X:20-52
5RIBOSOMAL_L39EPS00051 Ribosomal protein L39e signature.RL39_HALMA29-45  13:28-44
6RIBOSOMAL_L18EPS01106 Ribosomal protein L18e signature.RL18E_HALMA32-49  1P:31-48
7RIBOSOMAL_L21EPS01171 Ribosomal protein L21e signature.RL21_HALMA37-62  1R:36-61
8RIBOSOMAL_L5PS00358 Ribosomal protein L5 signature.RL5_HALMA42-58  1F:41-57
9RIBOSOMAL_L29PS00579 Ribosomal protein L29 signature.RL29_HALMA43-57  1W:42-56
10RIBOSOMAL_L24PS01108 Ribosomal protein L24 signature.RL24_HALMA46-63  1U:45-62
11RIBOSOMAL_L31EPS01144 Ribosomal protein L31e signature.RL31_HALMA49-63  1Y:48-62
12RIBOSOMAL_L44EPS01172 Ribosomal protein L44e signature.RL44E_HALMA60-71  14:60-71
13RIBOSOMAL_L23PS00050 Ribosomal protein L23 signature.RL23_HALMA63-78  1T:62-77
14RIBOSOMAL_L7AEPS01082 Ribosomal protein L7Ae signature.RL7A_HALMA68-85  1H:67-84
15RIBOSOMAL_L14PS00049 Ribosomal protein L14 signature.RL14_HALMA71-97  1L:71-97
16RIBOSOMAL_L13PS00783 Ribosomal protein L13 signature.RL13_HALMA83-106  1K:83-106
17RIBOSOMAL_L1EPS00939 Ribosomal protein L1e signature.RL4_HALMA103-129  1E:103-129
18RIBOSOMAL_L15PS00475 Ribosomal protein L15 signature.RL15_HALMA108-138  1M:107-137
19RIBOSOMAL_L22PS00464 Ribosomal protein L22 signature.RL22_HALMA124-148  1S:123-147
20RIBOSOMAL_L32EPS00580 Ribosomal protein L32e signature.RL32_HALMA129-149  1Z:128-148
21RIBOSOMAL_L6_2PS00700 Ribosomal protein L6 signature 2.RL6_HALMA151-172  1G:150-171
22RIBOSOMAL_L2PS00467 Ribosomal protein L2 signature.RL2_HALMA188-199  1C:187-198
23RIBOSOMAL_L3PS00474 Ribosomal protein L3 signature.RL3_HALMA195-218  1D:194-217

(-) Exons   (0, 0)

(no "Exon" information available for 1N8R)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain 1 from PDB  Type:PROTEIN  Length:73
                                                                                                          
               SCOP domains d1n8r1_ 1: Ribosomal protein L37ae                                        SCOP domains
               CATH domains 1n8r100 1:10-82  [code=2.20.25.30, no name defined]                       CATH domains
               Pfam domains ------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhh...hhhhhhhhhhhhhhhh............eeeee..eeee.....eee.......hhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------- Transcript
                1n8r 1   10 RTGRFGPRYGLKIRVRVADVEIKHKKKHKCPVCGFKKLKRAGTGIWMCGHCGYKIAGGCYQPETVAGKAVMKA   82
                                    19        29        39        49        59        69        79   

Chain 2 from PDB  Type:PROTEIN  Length:56
 aligned with RL37_HALMA | P32410 from UniProtKB/Swiss-Prot  Length:57

    Alignment length:56
                                    11        21        31        41        51      
          RL37_HALMA      2 TGAGTPSQGKKNTTTHTKCRRCGEKSYHTKKKVCSSCGFGKSAKRRDYEWQSKAGE   57
               SCOP domains d1n8r2_ 2: Ribosomal protein L37e                        SCOP domains
               CATH domains 1n8r200 2:1-56  [code=2.20.25.30, no name defined]       CATH domains
               Pfam domains -Ribosomal_L37e-1n8r201 2:2-56                           Pfam domains
         Sec.struct. author ...hhhhh.......eee......eeee...................hhhhh.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---RIBOSOMAL_L37E      --------------------------------- PROSITE
                 Transcript -------------------------------------------------------- Transcript
                1n8r 2    1 TGAGTPSQGKKNTTTHTKCRRCGEKSYHTKKKVCSSCGFGKSAKRRDYEWQSKAGE   56
                                    10        20        30        40        50      

Chain 3 from PDB  Type:PROTEIN  Length:46
 aligned with RL39_HALMA | P22452 from UniProtKB/Swiss-Prot  Length:50

    Alignment length:49
                                    11        21        31        41         
          RL39_HALMA      2 GKKSKATKKRLAKLDNQNSRVPAWVMLKTDREVQRNHKRRHWRRNDTDE   50
               SCOP domains d1n8r3_ 3: Ribosomal protein L3   9e              SCOP domains
               CATH domains 1n8r300 3:1-49                                    CATH domains
               Pfam domains ------Ribosomal_L39-1n8r301 3:7   -49             Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhh....hhhhhhhh..---............... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------RIBOSOMAL_L39E   ----- PROSITE
                 Transcript ------------------------------------------------- Transcript
                1n8r 3    1 GKKSKATKKRLAKLDNQNSRVPAWVMLKTDE---RNHKRRHWRRNDTDE   49
                                    10        20        30|   |   40         
                                                         31  35              

Chain 4 from PDB  Type:PROTEIN  Length:92
 aligned with RL44E_HALMA | P32411 from UniProtKB/Swiss-Prot  Length:92

    Alignment length:92
                                    10        20        30        40        50        60        70        80        90  
         RL44E_HALMA      1 MQMPRRFNTYCPHCNEHQEHEVEKVRSGRQTGMKWIDRQRERNSGIGNDGKFSKVPGGDKPTKKTDLKYRCGECGKAHLREGWRAGRLEFQE   92
               SCOP domains d1n8r4_ 4: Ribosomal protein L44e                                                            SCOP domains
               CATH domains 1n8r400 4:1-92  [code=3.10.450.80, no name defined]                                          CATH domains
               Pfam domains -------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eee.eeeeee....eeeeeeeee.........hhhhhhhhhhh....hhhhhh............eeeee.....ee..........eee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) -------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) -----------------------------------------------------------RIBOSOMAL_L4--------------------- PROSITE (3)
                 Transcript -------------------------------------------------------------------------------------------- Transcript
                1n8r 4    1 MQMPRRFNTYCPHCNEHQEHEVEKVRSGRQTGMKWIDRQRERNSGIGNDGKFSKVPGGDKPTKKTDLKYRCGECGKAHLREGWRAGRLEFQE   92
                                    10        20        30        40        50        60        70        80        90  

Chain A from PDB  Type:RNA  Length:2754
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
                1n8r A   10 UAUGCCAGCUGGUGGAUUGCUCGGCUCAGGCGCUGAUGAAGGACGUGCCAAGCUGCGAUAAGCCAUGGGGAGCCGCACGGAGGCGAAGAACCAUGGAUUUCCGAAUGAGAAUCUCUAACAAUUGCUUCGCGCAAUGAGGAACCCCGAGAACUGAAACAUCUCAGUAUCGGGAGGAACAGAAAACGCAAUGUGAUGUCGUUAGUAACCGCGAGUGAACGCGAUACAGCCCAAACCGAAGCCCUCACGGGCAAUGUGGUGUCAGGGCUACCUCUCAUCAGCCGACCGUCUCGACGAAGUCUCUUGGAACAGAGCGUGAUACAGGGUGACAACCCCGUACUCGAGACCAGUACGACGUGCGGUAGUGCCAGAGUAGCGGGGGUUGGAUAUCCCUCGCGAAUAACGCAGGCAUCGACUGCGAAGGCUAAACACAACCUGAGACCGAUAGUGAACAAGUAGUGUGAACGAACGCUGCAAAGUACCCUCAGAAGGGAGGCGAAAUAGAGCAUGAAAUCAGUUGGCGAUCGAGCGACAGGGCAUACAAGGUCCCUCGACGAAUGACCGACGCGCGAGCGUCCAGUAAGACUCACGGGAAGCCGAUGUUCUGUCGUACGUUUUGAAAAACGAGCCAGGGAGUGUGUCUGCAUGGCAAGUCUAACCGGAGUAUCCGGGGAGGCACAGGGAAACCGACAUGGCCGCAGGGCUUGCCCGAGGGCCGCCGUCUUCAAGGGCGGGGAGCCAUGUGGACACGACCCGAAUCCGGACGAUCUACGCAUGGACAAGAUGAAGCGUGCCGAAAGGCACGUGGAAGUCUGUUAGAGUUGGUGUCCUACAAUACCCUCUCGUGAUCUAUGUGUAGGGGUGAAAGGCCCAUCGAGUCCGGCAACAGCUGGUUCCAAUCGAAACAUGUCGAAGCAUGACCUCCGCCGAGGUAGUCUGUGAGGUAGAGCGACCGAUUGGUCCUGUCAAACUCCAAACUUACAGACGCCGUUUGACGCGGGGAUUCCGGUGCGCGGGGUAAGCCUGUGUACCAGGAGGGGAACAACCCAGAGAUAGGUUAAGGUCCCCAAGUGUGGAUUAAGUGUAAUCCUCUGAAGGUGGUCUCGAGCCCUAGACAGCCGGGAGGUGAGCUUAGAAGCAGCUACCCUCUAAGAAAAGCGUAACAGCUUACCGGCCGAGGUUUGAGGCGCCCAAAAUGAUCGGGACUCAAAUCCACCACCGAGACCUGUCCGUACCACUCAUACUGGUAAUCGAGUAGAUUGGCGCUCUAAUUGGAUGGAAGUAGGGGUGAAAACUCCUAUGGACCGAUUAGUGACGAAAAUCCUGGCCAUAGUAGCAGCGAUAGUCGGGUGAGAACCCCGACGGCCUAAUGGAUAAGGGUUCCUCAGCACUGCUGAUCAGCUGAGGGUUAGCCGGUCCUAAGUCAUACCGCAACUCGACUAUGACGAAAUGGGAAACGGGUUAAUAUUCCCGUGCCACUAUGCAGUGAAAGUUGACGCCCUGGGGUCGAUCACGCUGGGCAUCGCCCAGUCGAACCGUCCAACUCCGUGGAAGCCGUAAUGGCAGGAAGCGGACGAACGGCGGCAUAGGGAAACGUGAUUCAACCUGGGGCCCAUGAAAAGACGAGCAUAGUGUCCGUACCGAGAACCGACACAGGUGUCCAUGGCGGCGAAAGCCAAGGCCUGUCGGGAGCAACCAACGUUAGGGAAUUCGGCAAGUUAGUCCCGUACCUUCGGAAGAAGGGAUGCCUGCUCCGGAACGGAGCAGGUCGCAGUGACUCGGAAGCUCGGACUGUCUAGUAACAACAUAGGUGACCGCAAAUCCGCAAGGACUCGUACGGUCACUGAAUCCUGCCCAGUGCAGGUAUCUGAACACCUCGUACAAGAGGACGAAGGACCUGUCAACGGCGGGGGUCUUAAGGUAGCGUAGUACCUUGCCGCAUCAGUAGCGGCUUGCAUGAAUGGAUUAACCAGAGCUUCACUGUCCCAACGUUGGGCCCGGUGAACUGUACAUUCCAGUGCGGAGUCUGGAGACACCCAGGGGGAAGCGAAGACCCUAUGGAGCUUUACUGCAGGCUGUCGCUGAGGACUCUCACUCCGGGAGGAGGACACCGAUAGCCGGGCAGUUUGACUGGGGCGGUACGCGCUCGAAAAGAUAUCGAGCGCGCCCUAUGGCUAUCUCAGCCGGGGACCCGGCGAAGAGUGCAAGAGCAAAAGAUAGCUUGACAGUGUUCUUCCCAACGAGGAACGCUGACGCGAAAGCGUGGUCUAGCGAACCAAUUAGCCUGCUUGAUGCGGGCAAUUGAUGACAGAAAAGCUACCCUAGGGAUAACAGAGUCGUCACUCGCAAGAGCACAUAUCGACCGAGUGGCUUGCUACCUCGAUGUCGGUUCCCUCCAUCCUGCCCGUGCAGAAGCGGGCAAGGGUGAGGUUGUUCGCCUAUUAAAGGAGGUCGUGAGCUGGGUUUAGACCGUCGUGAGACAGGUCGGCUGCUAUCUACUGGGUGUGUAGGUGUCUGACAAGAACGACCGUAUAGUACGAGAGGAACUACGGUUGGUGGCCACUGGUGUACCGGUUGUUCGAGAGAGCACGUGCCGGGUAGCCACGCCACACGGGGUAAGAGCUGAACGCAUCUAAGCUCGAAACCCACUUGGAAAAGAGACACCGCCGAGGUCCCGCGUACAAGACGCGGUCGAUAGACUCGGGGUGUGCGCGUCGAGGUAACGAGACGUUAAGCCCACGAGCACUAACAGACCAA 2914
                                    19        29        39        49        59        69        79        89        99       109       119     ||131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       601       611       621       631       641       651       661       671       681       691       701       711  ||   722       732       742       752       762       772       782       792       802       812       822       832       842       852       862       872       882       892       902       912       922       932       942       952       962      1000      1010      1020      1030      1040      1050      1060      1070      1080      1090      1100      1110      1120      1130      1140      1150      1160      1170      1180      1190      1200      1210      1220      1230      1240      1250      1260      1270      1280      1290      1300      1310      1320      1330      1340      1350      1360      1370      1380      1390      1400      1410      1420      1430      1440      1450      1460      1470      1480      1490      1500      1510      1520      1530      1540      1550      1561      1571      1581      1591      1601      1611      1621      1631      1641      1651      1661      1671      1681      1691      1701      1711      1721      1731      1741      1751      1761      1771      1781      1791      1801      1811      1821      1831      1841      1851      1861      1871      1881      1891      1901      1911      1921      1931      1941      1951|     1973      1983      1993      2003      2013      2023      2033      2043      2053      2063      2073      2083      2093      2103      2113      2123      2133  ||  2243      2253      2263      2273      2283      2293      2303      2313      2323      2333    ||2348      2358      2368      2378      2388      2398      2408      2418      2428      2438      2448      2458      2468      2478      2488      2498      2508      2518      2528      2538      2548      2558      2568      2578      2588      2598      2608      2618      2628      2638      2648      2658     |2670      2680      2690      2700      2710      2720      2730      2740      2750      2760      2770      2780      2790      2800      2810      2820      2830      2840      2850      2860      2870      2880      2890      2900      2910    
                                                                                                                                             125|                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       714|                                                                                                                                                                                                                                                           970|                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            1559|                                                                                                                                                                                                                                                                                                                                                                                                  1951|                                                                                                                                                                        2136|                                                                                                 2338|                                                                                                                                                                                                                                                                                                                            2664|                                                                                                                                                                                                                                                       
                                                                                                                                              128                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        716                                                                                                                                                                                                                                                            999                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             1561                                                                                                                                                                                                                                                                                                                                                                                                   1964                                                                                                                                                                         2237                                                                                                  2344                                                                                                                                                                                                                                                                                                                             2667                                                                                                                                                                                                                                                       

Chain B from PDB  Type:RNA  Length:122
                                                                                                                                                           
                1n8r B 3001 UUAGGCGGCCACAGCGGUGGGGUUGCCUCCCGUACCCAUCCCGAACACGGAAGAUAAGCCCACCAGCGUUCCGGGGAGUACUGGAGUGCGCGAGCCUCUGGGAAACCCGGUUCGCCGCCACC 3122
                                  3010      3020      3030      3040      3050      3060      3070      3080      3090      3100      3110      3120  

Chain C from PDB  Type:PROTEIN  Length:237
 aligned with RL2_HALMA | P20276 from UniProtKB/Swiss-Prot  Length:240

    Alignment length:237
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       
           RL2_HALMA      2 GRRIQGQRRGRGTSTFRAPSHRYKADLEHRKVEDGDVIAGTVVDIEHDPARSAPVAAVEFEDGDRRLILAPEGVGVGDELQVGVSAEIAPGNTLPLAEIPEGVPVCNVESSPGDGGKFARASGVNAQLLTHDRNVAVVKLPSGEMKRLDPQCRATIGVVAGGGRTDKPFVKAGNKHHKMKARGTKWPNVRGVAMNAVDHPFGGGGRQHPGKPKSISRNAPPGRKVGDIASKRTGRGG  238
               SCOP domains d1n8rc2 C:1-90 N-terminal domain of ribosomal protein L2                                  d1n8rc1 C:91-237 C-terminal domain of ribosomal protein L2                                                                                          SCOP domains
               CATH domains 1n8rC02 C:1-78 Nucleic acid-binding proteins                                  ---1n8rC01 C:82-159  [code=2.30.30.30, no name defined]                          1n8rC03 C:160-237 Ribosomal protein L2, domain 3                               CATH domains
               Pfam domains ---------Ribosomal_L2-1n8rC02 C:10-82                                             -----Ribosomal_L2_C-1n8rC01 C:88-221                                                                                                       ---------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhh.hhhhh...............eeeeeeeee......eeeeeee....eeee..........eee...........eee.hhh....eee...................eeeee.....eeee.....eeee....eeee......hhhhh...hhhhhhhhhh.........hhhhhhhhhh..............ee...........ee......... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RIBOSOMAL_L2--------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1n8r C    1 GRRIQGQRRGRGTSTFRAPSHRYKADLEHRKVEDGDVIAGTVVDIEHDPARSAPVAAVEFEDGDRRLILAPEGVGVGDELQVGVDAEIAPGNTLPLAEIPEGVPVCNVESSPGDGGKFARASGVNAQLLTHDRNVAVVKLPSGEMKRLDPQCRATIGVVGGGGRTDKPFVKAGNKHHKMKARGTKWPNVRGVAMNAVDHPFGGGGRQHPGKPKSISRNAPPGRKVGDIASKRTGRGG  237
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       

Chain D from PDB  Type:PROTEIN  Length:337
 aligned with RL3_HALMA | P20279 from UniProtKB/Swiss-Prot  Length:338

    Alignment length:337
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       
           RL3_HALMA      2 PQPSRPRKGSLGFGPRKRSTSETPRFNSWPSDDGQPGVQGFAGYKAGMTHVVLVNDEPNSPREGMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTLDVPEDHDPDAAEEQIRDAHEAGDLGDLRLITHTVPDAVPSVPKKKPDVMETRVGGGSVSDRLDHALDIVEDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPTVDGGFVNYGEVDGPYTLVKGSVPGPDKRLVRFRPAVRPNDQPRLDPEVRYVSNESNQG  338
               SCOP domains d1n8rd_ D: Ribosomal protein L3                                                                                                                                                                                                                                                                                                                   SCOP domains
               CATH domains 1n8rD03 D:1-38,D:207-257              1n8rD01 D:39-77,D:189-206,D:258-337    1n8rD02 D:78-188  [code=3.30.1430.10, no name defined]                                                         1n8rD01           1n8rD03 D:1-38,D:207-257                           1n8rD01 D:39-77,D:189-206,D:258-337 Translation factors                          CATH domains
               Pfam domains --------------------------------------------Ribosomal_L3-1n8rD01 D:45-312                                                                                                                                                                                                                                               ------------------------- Pfam domains
         Sec.struct. author ....................................ee..eeeeeeeeeeeee..............eeeeeeee...eeeeeeeeeeee..eeeeeeeee......hhhhh.......hhhhhhhhhhhhhhhh.eeeeeeeee.hhhhh.........eeeeeee..hhhhhhhhhhhhhhhh.eehhhhh.....eeeeeee.....eehhhhhh.....hhhhhh.........................ee....eeeeeeeeeeeeeee................eeeeeee.........eeeeee.............eeee....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RIBOSOMAL_L3            ------------------------------------------------------------------------------------------------------------------------ PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1n8r D    1 PQPSRPRKGSLGFGPRKRSTSETPRFNSWPSDDGQPGVQGFAGYKAGMTHVVLVNDEPNSPREGMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTLDVPEDHDPDAAEEQIRDAHEAGDLGDLRLITHTVPDAVPSVPKKKPDVMETRVGGGSVSDRLDHALDIVEDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPTVDGGFVNYGEVDGPYTLVKGSVPGPDKRLVRFRPAVRPNDQPRLDPEVRYVSNESNQG  337
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       

Chain E from PDB  Type:PROTEIN  Length:246
 aligned with RL4_HALMA | P12735 from UniProtKB/Swiss-Prot  Length:246

    Alignment length:246
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240      
           RL4_HALMA      1 MQATIYDLDGNTDGEVDLPDVFETPVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAESFGSGRGQAHVPKQDGRARRVPQAVKGRSAHPPKTEKDRSLDLNDKERQLAVRSALAATADADLVADRGHEFDRDEVPVVVSDDFEDLVKTQEVVSLLEALDVHADIDRADETKIKAGQGSARGRKYRRPASILFVTSDEPSTAARNLAGADVATASEVNTEDLAPGGAPGRLTVFTESALAEVAER  246
               SCOP domains d1n8re_ E: Ribosomal protein L4                                                                                                                                                                                                                        SCOP domains
               CATH domains 1n8rE00 E:1-246  [code=3.40.1370.10, no name defined]                                                                                                                                                                                                  CATH domains
               Pfam domains ---------------Ribosomal_L4-1n8rE01 E:16-246                                                                                                                                                                                                           Pfam domains
         Sec.struct. author .eeeee.....eeeeee.hhhhhh..hhhhhhhhhhhhhhhh................ee..........eee..ee.........................hhhhhhhhhhhhhhhh.hhhhhhhhh.........eee.hhhhhh.hhhhhhhhhhhh.hhhhhhhh...ee..hhhhhhh..ee.....eeee....hhhhhh....eeee....hhhhhhhhhh....eeeehhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------RIBOSOMAL_L1E              --------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                1n8r E    1 MQATIYDLDGNTDGEVDLPDVFETPVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAESFGSGRGQAHVPKLDGRARRVPQAVKGRSAHPPKTEKDRSLDLNDKERQLAVRSALAATADADLVADRGHEFDRDEVPVVVSDDFEDLVKTQEVVSLLEALDVHADIDRADETKIKAGQGSARGRKYRRPASILFVTSDEPSTAARNLAGADVATASEVNTEDLAPGGAPGRLTVFTESALAEVAER  246
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240      

Chain F from PDB  Type:PROTEIN  Length:140
 aligned with RL5_HALMA | P14124 from UniProtKB/Swiss-Prot  Length:177

    Alignment length:165
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170     
           RL5_HALMA     11 FHEMREPRIEKVVVHMGIGHGGRDLANAEDILGEITGQMPVRTKAKRTVGEFDIREGDPIGAKVTLRDEMAEEFLQTALPLAELATSQFDDTGNFSFGVEEHTEFPSQEYDPSIGIYGLDVTVNLVRPGYRVAKRDKASRSIPTKHRLNPADAVAFIESTYDVEV  175
               SCOP domains d1n8rf_ F: Ribosomal      protein L5                                                                                                                                  SCOP domains
               CATH domains 1n8rF00 F:10-174  [c     ode=3.30.1440.10, no name defined]                                                                                                           CATH domains
               Pfam domains -Ribosomal_L5-1n8rF0     1 F:11-64                     ---Ribosomal_L5_C-1n8rF02 F:68-166                                                                    -------- Pfam domains
         Sec.struct. author .......eeeeeeeee....-----..hhhhhhhhhh...ee...................eeeee.hhhhhhhhhhhhhhh............eee.--------------------.eeeeeee...hhhhhh.......hhhhh.hhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) --------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) --------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) -------------------------------RIBOSOMAL_L5     --------------------------------------------------------------------------------------------------------------------- PROSITE (4)
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1n8r F   10 FHEMREPRIEKVVVHMGIGH-----ANAEDILGEITGQMPVRTKAKRTVGEFDIREGDPIGAKVTLRDEMAEEFLQTALPLAELATSQFDDTGNFSFG--------------------LDVTVNLVRPGYRVAKRDKASRSIPTKHRLNPADAVAFIESTYDVEV  174
                                    19        29     |  39        49        59        69        79        89        99       | -         -       129       139       149       159       169     
                                              29    35                                                                     107                  128                                              

Chain G from PDB  Type:PROTEIN  Length:172
 aligned with RL6_HALMA | P14135 from UniProtKB/Swiss-Prot  Length:178

    Alignment length:172
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171  
           RL6_HALMA      2 PRVELEIPEDVDAEQDHLDITVEGDNGSVTRRLWYPDIDVSVDGDTVVIESDEDNAKTMSTIGTFQSHIENMFHGVTEGWEYGMEVFYSHFPMQVNVEGDEVVIENFLGEKAPRRTTIHGDTDVEIDGEELTVSGPDIEAVGQTAADIEQLTRINDKDVRVFQDGVYITRKP  173
               SCOP domains d1n8rg1 G:1-79 Ribosomal protein L6                                            d1n8rg2 G:80-172 Ribosomal protein L6                                                         SCOP domains
               CATH domains 1n8rG02 G:1-79  [code=3.90.930.12, no name defined]                            1n8rG01 G:80-172  [code=3.90.930.12, no name defined]                                         CATH domains
           Pfam domains (1) ------------------------------------------------------------------------------------------Ribosomal_L6-1n8rG01 G:91-165                                              ------- Pfam domains (1)
           Pfam domains (2) ------------------------------------------------------------------------------------------Ribosomal_L6-1n8rG02 G:91-165                                              ------- Pfam domains (2)
         Sec.struct. author .eeeee.....eeeee..eeeeee..eeeeee.....eeeeee..eeeeee...hhhhhhhhhhhhhhhhhhhhhhh..eeeeeeee......eeee...eeeeehhhhh...eeee.....eeeee..eeeeee.hhhhhhhhhhhhhhh.............eeeeee.. Sec.struct. author
                 SAPs(SNPs) -S--------------------S----------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------RIBOSOMAL_L6_2        - PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1n8r G    1 PRVELEIPEDVDAEQDHLDITVEGDNGSVTRRLWYPDIDVSVDGDTVVIESDEDNAKTMSTIGTFQSHIENMFHGVTEGWEYGMEVFYSHFPMQVNVEGDEVVIENFLGEKAPRRTTIHGDTDVEIDGEELTVSGPDIEAVGQTAADIEQLTRINDKDVRVFQDGVYITRKP  172
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170  

Chain H from PDB  Type:PROTEIN  Length:119
 aligned with RL7A_HALMA | P12743 from UniProtKB/Swiss-Prot  Length:120

    Alignment length:119
                                    11        21        31        41        51        61        71        81        91       101       111         
          RL7A_HALMA      2 PVYVDFDVPADLEDDALEALEVARDTGAVKKGTNETTKSIERGSAELVFVAEDVQPEEIVMHIPELADEKGVPFIFVEQQDDLGHAAGLEVGSAAAAVTDAGEADADVEDIADKVEELR  120
               SCOP domains d1n8rh_ H: Ribosomal protein L7ae                                                                                       SCOP domains
               CATH domains 1n8rH00 H:1-119  [code=3.30.1330.30, no name defined]                                                                   CATH domains
               Pfam domains -------------Ribosomal_L7Ae-1n8rH01 H:14-108                                                                ----------- Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhhhhhhhh.eeehhhhhhhhhhhh....eeee.....hhhhhhhhhhhhh....eeee.hhhhhhhhh.......eeee.....hhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------RIBOSOMAL_L7AE    ----------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------- Transcript
                1n8r H    1 PVYVDFDVPADLEDDALEALEVARDTGAVKKGTNETTKSIERGSAELVFVAEDVQPEEIVMHIPELADEKGVPFIFVEQQDDLGHAAGLEVGSAAAAVTDAGAAATVLEEIADKVEELR  119
                                    10        20        30        40        50        60        70        80        90       100       110         

Chain I from PDB  Type:PROTEIN  Length:29
 aligned with RL10_HALMA | P15825 from UniProtKB/Swiss-Prot  Length:348

    Alignment length:62
                                    21        31        41        51        61        71  
          RL10_HALMA     12 IPEWKQEEVDAIVEMIESYESVGVVNIAGIPSRQLQDMRRDLHGTAELRVSRNTLLERALDD   73
               SCOP domains d1n8ri_ I:                                                     SCOP domains
               CATH domains 1n8rI00 I:12-73                                                CATH domains
               Pfam domains -------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhh---------------------------------hhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------- Transcript
                1n8r I   12 IPEWKQEEVDAIVEMIES---------------------------------RNTLLERALDD   73
                                    21       | -         -         -         - |      71  
                                            29                                63          

Chain J from PDB  Type:PROTEIN  Length:156
                                                                                                                                                                                             
               SCOP domains d1n8rj_ J: Ribosomal protein L10e                                                                                                                            SCOP domains
               CATH domains 1n8rJ00 J:1-167  [code=3.90.1170.10, no name defined]                                                                                                        CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhh.........................eee.........eeeeeee...eeeehhhhhhhhhhhhh...........eeee.....eeeee..........eeeeeeeee....eeeeeee....hhhhhhhhhh......eeeee...... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                1n8r J    1 KPGAMYRNSSKPAYTRREYISGIPGKKIAQFDMGNNGAGPTYPAQVELVVEKPVQIRHNALEAARVAANRYVQNSGAAANYKFRIRKFPFHVIRENKDGMRAPFGKPVGTAARVHGANHIFIAWVNPDPNVEEAWRRAKMKVTPTINIDSSPAGNA  167
                                    10        20        30        40        50        60        70        80        90      |111       121       131       141       151       161      
                                                                                                                           97|                                                          
                                                                                                                           109                                                          

Chain K from PDB  Type:PROTEIN  Length:142
 aligned with RL13_HALMA | P29198 from UniProtKB/Swiss-Prot  Length:145

    Alignment length:142
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143  
          RL13_HALMA      4 AEFDADVIVDARDCIMGRVASQVAEQALDGETVAVVNAERAVITGREEQIVEKYEKRVDIGNDNGYFYPKRPDGIFKRTIRGMLPHKKQRGREAFESVRVYLGNPYDEDGEVLDGTSLDRLSNIKFVTLGEISETLGANKTW  145
               SCOP domains d1n8rk_ K: Ribosomal protein L13                                                                                                               SCOP domains
               CATH domains 1n8rK00 K:4-145  [code=3.90.1180.10, no name defined]                                                                                          CATH domains
               Pfam domains -----Ribosomal_L13-1n8rK01 K:9-117                                                                                ---------------------------- Pfam domains
         Sec.struct. author ......eeee....hhhhhhhhhhhhhh....eeeehhhh.eee.hhhhhhhhhhhhhhh..........hhhhhhhhhhhh.....hhhhhhhhhheee..................hhhhh..eeehhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ---------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) -------------------------------------------------------------------------------RIBOSOMAL_L13           --------------------------------------- PROSITE (3)
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1n8r K    4 AEFDADVIVDARDCIMGRVASQVAEQALDGETVAVVNAERAVITGREEQIVEKYEKRVDIGNDNGYFYPKRPDGIFKRTIRGMLPHKKQRGREAFESVRVYLGNPYDEDGEVLDGTSLDRLSNIKFVTLGEISETLGANKTW  145
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143  

Chain L from PDB  Type:PROTEIN  Length:132
 aligned with RL14_HALMA | P22450 from UniProtKB/Swiss-Prot  Length:132

    Alignment length:132
                                    10        20        30        40        50        60        70        80        90       100       110       120       130  
          RL14_HALMA      1 MEALGADVTQGLEKGSLITCADNTGARELKVISVHGYSGTKNRHPKAGLGDKITVSVTKGTPEMRRQVLEAVVVRQRKPIRRPDGTRVKFEDNAAVIVDENEDPRGTELKGPIAREVAQRFGSVASAATMIV  132
               SCOP domains d1n8rl_ L: Ribosomal protein L14                                                                                                     SCOP domains
               CATH domains 1n8rL00 L:1-132 Ribosomal Protein L14;                                                                                               CATH domains
               Pfam domains ----------Ribosomal_L14-1n8rL01 L:11-132                                                                                             Pfam domains
         Sec.struct. author ......ee...ee...eeee.....eeeeeeeee...........ee....eeeeeeeee.......eeeeeeee....ee.....eeee...eeeee.............eee.hhh..hhhhhh...eee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------RIBOSOMAL_L14  PDB: L:71-97----------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------ Transcript
                1n8r L    1 MEALGADVTQGLEKGSLITCADNTGARELKVISVHGYSGTKNRHPKAGLGDKITVSVTKGTPEMRRQVLEAVVVRQRKPIRRPDGTRVKFEDNAAVIVDENEDPRGTELKGPIAREVAQRFGSVASAATMIV  132
                                    10        20        30        40        50        60        70        80        90       100       110       120       130  

Chain M from PDB  Type:PROTEIN  Length:145
 aligned with RL15_HALMA | P12737 from UniProtKB/Swiss-Prot  Length:165

    Alignment length:150
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151
          RL15_HALMA      2 TSKKKRQRGSRTHGGGSHKNRRGAGHRGGRGDAGRDKHEFHNHEPLGKSGFKRPQKVQEEAATIDVREIDENVTLLAADDVAEVEDGGFRVDVRDVVEEADDADYVKVLGAGQVRHELTLIADDFSEGAREKVEGAGGSVELTDLGEERQ  151
               SCOP domains d1n8rm_ M: Ribosomal protein L15 (L15p)                                                                                                                SCOP domains
               CATH domains 1n8rM01 M:1-50                                    1n8rM02 M:51-149  [code=3.100.10.     10, no name defined]                                         - CATH domains
               Pfam domains ---------------Ribosomal_L18e-1n8rM01 M:16-143                                                                                                 ------- Pfam domains
         Sec.struct. author ..hhhhh...............hhhhhh.........................hhhhh..eeeeehhhhhhh...........-----.eee.hhh........eeeee.........eeee.eehhhhhhhhhhh..eeee........ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------------------------------------------RIBOSOMAL_L15  PDB: M:107-137  ------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                1n8r M    1 TSKKKRQRGSRTHGGGSHKNRRGAGHRGGRGDAGRDKHEFHNHEPLGKSGFKRPQKVQEEAATIDVREIDENVTLLAADDVAE-----FRVDVRDVVEEADDADYVKVLGAGQVRHELTLIADDFSEGAREKVEGAGGSVELTDLGEERQ  150
                                    10        20        30        40        50        60        70        80  |     90       100       110       120       130       140       150
                                                                                                             83    89                                                             

Chain N from PDB  Type:PROTEIN  Length:194
                                                                                                                                                                                                                                   
               SCOP domains d1n8rn_ N: Ribosomal protein L15e                                                                                                                                                                  SCOP domains
               CATH domains 1n8rN00 N:1-194 Ribosomal protein l15e                                                                                                                                                             CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhh...hhhhhhhhhhhhhhhh....eee.....hhhhhhhhh......eeeeeeeee.............hhhhh.........hhhhhhhhhhhhhh...eeeeeeeeee...eeeeeeeee............hhhhhhhhhh.hhhhh.hhhhhhhh...............hhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1n8r N    1 ARSAYSYIREAWKRPKEGQIAELMWHRMQEWRNEPAVVRIERPTRLDRARSLGYKAKQGIIVVRVAIRKGSSRRTRFNKGRRSKRMMVNRITRKKNIQRIAEERANRKFPNLRVLNSYSVGEDGRHKWHEVILIDPDHPAIKSDDQLSWISRTRHRLRTFRGLTSAGRRCRGLRGQGKGSEKVRPSLRVNGAKA  194
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190    

Chain O from PDB  Type:PROTEIN  Length:186
 aligned with RL18_HALMA | P14123 from UniProtKB/Swiss-Prot  Length:187

    Alignment length:186
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181      
          RL18_HALMA      2 ATGPRYKVPMRRRREARTDYHQRLRLLKSGKPRLVARKSNKHVRAQLVTLGPNGDDTLASAHSSDLAEYGWEAPTGNMPSAYLTGLLAGLRAQEAGVEEAVLDIGLNSPTPGSKVFAIQEGAIDAGLDIPHNDDVLADWQRTRGAHIAEYDEQLEEPLYSGDFDAADLPEHFDELRETLLDGDIEL  187
               SCOP domains d1n8ro_ O: Ribosomal protein L18 (L18p)                                                                                                                                                    SCOP domains
               CATH domains 1n8rO00 O:1-186  [code=3.30.420.100, no name defined]                                                                                                                                      CATH domains
               Pfam domains --------Ribosomal_L18p-1n8rO01 O:9-129                                                                                           --------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhh...hhhhhhhhhhh...eeeeee....eeeeeee......eeeeeee.hhhhhhh......hhhhhhhhhhhhhhhhhhh.....eee.........hhhhhhhhhhhhhh.....hhhhh..hhhhhhhhhhhhhhh..............hhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                1n8r O    1 ATGPRYKVPMRRRREARTDYHQRLRLLKSGKPRLVARKSNKHVRAQLVTLGPNGDDTLASAHSSDLAEYGWEAPTGNMPSAYLTGLLAGLRAQEAGVEEAVLDIGLNSPTPGSKVFAIQEGAIDAGLDIPHNDDVLADWQRTRGAHIAEYDEQLEEPLYSGDFDAADLPEHFDELRETLLDGDIEL  186
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180      

Chain P from PDB  Type:PROTEIN  Length:115
 aligned with RL18E_HALMA | P12733 from UniProtKB/Swiss-Prot  Length:116

    Alignment length:115
                                    11        21        31        41        51        61        71        81        91       101       111     
         RL18E_HALMA      2 SKTNPRLSSLIADLKSAARSSGGAVWGDVAERLEKPRRTHAEVNLGRIERYAQEDETVVVPGKVLGSGVLQKDVTVAAVDFSGTAETKIDQVGEAVSLEQAIENNPEGSHVRVIR  116
               SCOP domains d1n8rp_ P: Ribosomal protein L18e                                                                                   SCOP domains
               CATH domains 1n8rP00 P:1-115  [code=3.100.10.10, no name defined]                                                                CATH domains
               Pfam domains ---------------------Ribosomal_L18e-1n8rP01 P:22-99                                                ---------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhheeeehhhhhhhh....eeeeeeeee.........eeeeeeehhhhhhhhhhhheeeehhhhhhhh.....eee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ------------------------------RIBOSOMAL_L18E    ------------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------- Transcript
                1n8r P    1 SKTNPRLSSLIADLKSAARSSGGAVWGDVAERLEKPRRTHAEVNLGRIERYAQEDETVVVPGKVLGSGVLQKDVTVAAVDFSGTAETKIDQVGEAVSLEQAIENNPEGSHVRVIR  115
                                    10        20        30        40        50        60        70        80        90       100       110     

Chain Q from PDB  Type:PROTEIN  Length:143
 aligned with RL19E_HALMA | P14119 from UniProtKB/Swiss-Prot  Length:149

    Alignment length:143
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141   
         RL19E_HALMA      2 TDLSAQKRLAADVLDVGKNRVWFNPERQGDIADAITREDVRELVDEGAIQAKDKKGNSRGRARERQKKRAYGHQKGAGSRKGKAGARQNSKEDWESRIRAQRTKLRELRDEGTLSSSQYRDLYDKAGGGEFDSVADLERYIDA  144
               SCOP domains d1n8rq_ Q: Ribosomal protein L19 (L19e)                                                                                                         SCOP domains
               CATH domains 1n8rQ01 Q:1-55  [code=1.10.1650.10, no name defined]   1n8rQ03 Q:56-88 Single Heli x bin1n8rQ02 Q:89-143  [code=1.10.1200.60, no name defined]  CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhh..hhh.eee...hhhhhhhh.hhhhhhhhhhh..eee.......hhhhhhhhhhhhh....hhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhh....hhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) -----RIBOSOMAL_L19E      ---------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1n8r Q    1 TDLSAQKRLAADVLDVGKNRVWFNPERQGDIADAITREDVRELVDEGAIQAKDKKGNSRGRARERQKKRAKGHQKGAGSRKGKAGARQNSKEDWESRIRAQRTKLRELRDEGTLSSSQYRDLYDKAGGGEFDSVADLERYIDA  143
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140   

Chain R from PDB  Type:PROTEIN  Length:95
 aligned with RL21_HALMA | P12734 from UniProtKB/Swiss-Prot  Length:96

    Alignment length:95
                                    11        21        31        41        51        61        71        81        91     
          RL21_HALMA      2 PSSNGPLEGTRGKLKNKPRDRGTSPPQRAVEEFDDGEKVHLKIDPSVPNGRFHPRFDGQTGTVEGKQGDAYKVDIVDGGKEKTIIVTAAHLRRQE   96
               SCOP domains d1n8rr_ R: Ribosomal proteins L21e                                                              SCOP domains
               CATH domains 1n8rR00 R:1-95 Myosin S1 fragment SH3-like barrel                                               CATH domains
               Pfam domains Ribosomal_L21e-1n8rR01 R:1-95                                                                   Pfam domains
         Sec.struct. author ................hhhhh....hhhhhh......eeee...........hhhhh..eeeeeeee..eeeeeeee..eeeeeeehhh.eee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) -----------------------------------RIBOSOMAL_L21E            ---------------------------------- PROSITE (3)
                 Transcript ----------------------------------------------------------------------------------------------- Transcript
                1n8r R    1 PSSNGPLEGTRGKLKNKPRDRGTSPPQRAVEEFDDGEKVHLKIDPSVPNGRFHPRFDGQTGTVEGKQGDAYKVDIVDGGKEKTIIVTAAHLRRQE   95
                                    10        20        30        40        50        60        70        80        90     

Chain S from PDB  Type:PROTEIN  Length:150
 aligned with RL22_HALMA | P10970 from UniProtKB/Swiss-Prot  Length:155

    Alignment length:150
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151
          RL22_HALMA      2 GISYSVEADPDTTAKAMLRERQMSFKHSKAIAREIKGKTAGEAVDYLEAVIEGDQPVPFKQHNSGVGHKSKVDGWDAGRYPEKASKAFLDLLENAVGNADHQGFDGEAMTIKHVAAHKVGEQQGRKPRAMGRASAWNSPQVDVELILEEP  151
               SCOP domains d1n8rs_ S: Ribosomal protein L22                                                                                                                       SCOP domains
               CATH domains 1n8rS00 S:1-150 Ribosomal Protein L22; Chain A                                                                                                         CATH domains
               Pfam domains ---------------Ribosomal_L22-1n8rS01 S:16-149                                                                                                        - Pfam domains
         Sec.struct. author ............eeeeeeeee..hhhhhhhhhhhhh..hhhhhhhhhhhhhhh...ee...................ee.hhhhhhhhhhhhhhhhhhhhh........eeeeeeeeeeeee..eee.....eee..eeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE (2)
                PROSITE (3) --------------------------------------------------------------------------------------------------------------------------RIBOSOMAL_L22            --- PROSITE (3)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                1n8r S    1 GISYSVEADPDTTAKAMLRERQMSFKHSKAIAREIKGKTAGEAVDYLEAVIEGDQPVPFKQHNSGVGHKSKVDGWDAGRYPEKASKAFLDLLENAVGNADHQGFDGEAMTIKHVAAHKVGEQQGRKPRAMGRASAWNSPQVDVELILEEP  150
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150

Chain T from PDB  Type:PROTEIN  Length:81
 aligned with RL23_HALMA | P12732 from UniProtKB/Swiss-Prot  Length:85

    Alignment length:81
                                    11        21        31        41        51        61        71        81 
          RL23_HALMA      2 SWDVIKHPHVTEKAMNDMDFQNKLQFAVDDRASKGEVADAVEEQYDVTVEQVNTQNTMDGEKKAVVRLSEDDDAQEVASRI   82
               SCOP domains d1n8rt_ T: Ribosomal protein L23                                                  SCOP domains
               CATH domains 1n8rT00 T:1-81  [code=3.30.70.330, no name defined]                               CATH domains
               Pfam domains -Ribosomal_L23-1n8rT01 T:2-81                                                     Pfam domains
         Sec.struct. author ....eeee..hhhhhhhhhhhheeeeee....hhhhhhhhhhhhhh..eeeeeeee.....eeeeeee....hhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) --------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) --------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) -------------------------------------------------------------RIBOSOMAL_L23   ---- PROSITE (4)
                 Transcript --------------------------------------------------------------------------------- Transcript
                1n8r T    1 SWDVIKHPHVTEKAMNDMDFQNKLQFAVDDRASKGEVADAVEEQYDVTVEQVNTQNTMDGEKKAVVRLSEDDDAQEVASRI   81
                                    10        20        30        40        50        60        70        80 

Chain U from PDB  Type:PROTEIN  Length:119
 aligned with RL24_HALMA | P10972 from UniProtKB/Swiss-Prot  Length:120

    Alignment length:119
                                    11        21        31        41        51        61        71        81        91       101       111         
          RL24_HALMA      2 SKQPDKQRKSQRRAPLHERHKQVRATLSADLREEYGQRNVRVNAGDTVEVLRGDFAGEEGEVINVDLDKAVIHVEDVTLEKTDGEEVPRPLDTSNVRVTDLDLEDEKREARLESEDDSA  120
               SCOP domains d1n8ru_ U: Ribosomal proteins L24 (L24p)                                                                                SCOP domains
               CATH domains 1n8rU00 U:1-119  [code=2.30.30.30, no name defined]                                                                     CATH domains
               Pfam domains -------------------------------------------KOW-1n8rU01 U:44-75             -------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhh.hhhhhhhh.eeeehhhhhhhhh..eee.....eeee........eeeeeeee....eeee...eee.....eee...hhh.eeeee....hhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------RIBOSOMAL_L24     --------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------- Transcript
                1n8r U    1 SKQPDKQRKSQRRAPLHERHKQVRATLSADLREEYGQRNVRVNAGDTVEVLRGDFAGEEGEVINVDLDKAVIHVEDVTLEKTDGEEVPRPLDTSNVRVTDLDLEDEKREARLESEDDSA  119
                                    10        20        30        40        50        60        70        80        90       100       110         

Chain V from PDB  Type:PROTEIN  Length:53
 aligned with RL24E_HALMA | P14116 from UniProtKB/Swiss-Prot  Length:67

    Alignment length:53
                                    14        24        34        44        54   
         RL24E_HALMA      5 RECDYCGTDIEPGTGTMFVHKDGATTHFCSSKCENNADLGREARNLEWTDTAR   57
               SCOP domains d1n8rv_ V: Ribosomal protein L24e                     SCOP domains
               CATH domains 1n8rV00 V:4-56  [code=2.30.170.20, no name defined]   CATH domains
               Pfam domains Ribosomal_L24e-1n8rV01 V:4-56                         Pfam domains
         Sec.struct. author ...............eeee.....eeee.hhhhhhhhh...hhhhh....... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------- PROSITE (2)
                PROSITE (3) ----RIBOSOMAL_L24E    ------------------------------- PROSITE (3)
                 Transcript ----------------------------------------------------- Transcript
                1n8r V    4 RECDYCGTDIEPGTGTMFVHKDGATTHFCSSKCENNADLGREARNLEWTDTAR   56
                                    13        23        33        43        53   

Chain W from PDB  Type:PROTEIN  Length:65
 aligned with RL29_HALMA | P10971 from UniProtKB/Swiss-Prot  Length:71

    Alignment length:65
                                    11        21        31        41        51        61     
          RL29_HALMA      2 TVLHVQEIRDMTPAEREAELDDLKTELLNARAVQAAGGAPENPGRIKELRKAIARIKTIQGEEGD   66
               SCOP domains d1n8rw_ W: Ribosomal protein L29 (L29p)                           SCOP domains
               CATH domains 1n8rW00 W:1-65  [code=1.10.287.310, no name defined]              CATH domains
               Pfam domains ----Ribosomal_L29-1n8rW01 W:5-63                               -- Pfam domains
         Sec.struct. author ...hhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ----------------------------------------------------------------- PROSITE (3)
                PROSITE (4) ----------------------------------------------------------------- PROSITE (4)
                PROSITE (5) -----------------------------------------RIBOSOMAL_L29  --------- PROSITE (5)
                 Transcript ----------------------------------------------------------------- Transcript
                1n8r W    1 TVLHVQEIRDMTPAEREAELDDLKTELLNARAVQAAGGAPENPGRIKELRKAIARIKTIQGEEGD   65
                                    10        20        30        40        50        60     

Chain X from PDB  Type:PROTEIN  Length:154
 aligned with RL30_HALMA | P14121 from UniProtKB/Swiss-Prot  Length:154

    Alignment length:154
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150    
          RL30_HALMA      1 MHALVQLRGEVNMHTDIQDTLEMLNIHHVNHCTLVPETDAYRGMVAKVNDFVAFGEPSQETLETVLATRAEPLEGDADVDDEWVAEHTDYDDISGLAFALLSEETTLREQGLSPTLRLHPPRGGHDGVKHPVKEGGQLGKHDTEGIDDLLEAMR  154
               SCOP domains d1n8rx_ X: Archaeal L30 (L30a)                                                                                                                             SCOP domains
               CATH domains 1n8rX01 X:1-57,X:114-154                                 1n8rX02 X:58-113  [code=1.10.15.30, no name defined]    1n8rX01 X:1-57,X:114-154                  CATH domains
               Pfam domains Ribosomal_L30-1n8rX01 X:1-52                        ------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeee.......hhhhhhhhhhh......eeeee..hhhhhhhhhhhh..eeee..hhhhhhhhhhhhh.........hhhhhhhhh...hhhhhhhhhhh.............ee.............hhhhh...ee.hhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ---------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ---------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) -------------------RIBOSOMAL_L30  PDB: X:20-52      ------------------------------------------------------------------------------------------------------ PROSITE (4)
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1n8r X    1 MHALVQLRGEVNMHTDIQDTLEMLNIHHVNHCTLVPETDAYRGMVAKVNDFVAFGEPSQETLETVLATRAEPLEGDADVDDEWVAEHTDYDDISGLAFALLSEETTLREQGLSPTLRLHPPRGGHDGVKHPVKEGGQLGKHDTEGIDDLLEAMR  154
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150    

Chain Y from PDB  Type:PROTEIN  Length:82
 aligned with RL31_HALMA | P18138 from UniProtKB/Swiss-Prot  Length:92

    Alignment length:82
                                    17        27        37        47        57        67        77        87  
          RL31_HALMA      8 ERVVTIPLRDARAEPNHKRADKAMILIREHLAKHFSVDEDAVRLDPSINEAAWARGRANTPSKIRVRAARFEEEGEAIVEAE   89
               SCOP domains d1n8ry_ Y: Ribosomal protein L31e                                                  SCOP domains
               CATH domains 1n8rY00 Y:7-88  [code=3.10.440.10, no name defined]                                CATH domains
               Pfam domains Ribosomal_L31e-1n8rY01 Y:7-87                                                    - Pfam domains
         Sec.struct. author .eeeeee.hhhhhhhhhhhhhhhhhhhhhhhhhhh......eeehhhhhhhhhh........eeeeeeeee....eeeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) -----------------------------------------RIBOSOMAL_L31E -------------------------- PROSITE (2)
                 Transcript ---------------------------------------------------------------------------------- Transcript
                1n8r Y    7 ERVVTIPLRDARAEPNHKRADKAMILIREHLAKHFSVDEDAVRLDPSINEAAWARGRANTPSKIRVRAARFEEEGEAIVEAE   88
                                    16        26        36        46        56        66        76        86  

Chain Z from PDB  Type:PROTEIN  Length:142
 aligned with RL32_HALMA | P12736 from UniProtKB/Swiss-Prot  Length:241

    Alignment length:142
                                   105       115       125       135       145       155       165       175       185       195       205       215       225       235  
          RL32_HALMA     96 TELQARGLTEKTPDLSDEDARLLTQRHRVGKPQFNRQDHHKKKRVSTSWRKPRGQLSKQRRGIKGKGDTVEAGFRSPTAVRGKHPSGFEEVRVHNVDDLEGVDGDTEAVRIASKVGARKRERIEEEAEDAGIRVLNPTYVEV  237
               SCOP domains d1n8rz_ Z: Ribosomal protein L32e                                                                                                              SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -----------------------------Ribosomal_L32e-1n8rZ01 Z:124-231                                                                            ----- Pfam domains
         Sec.struct. author .eeee..........hhhhhhhhhhhhhhh........................................hhhhh.............eeeee..hhhhh......eeeee....hhhhhhhhhhhhhhh........eeee Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ---------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ---------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) ---------------------------------RIBOSOMAL_L32E       ---------------------------------------------------------------------------------------- PROSITE (4)
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1n8r Z   95 TELQARGLTEKTPDLSDEDARLLTQRHRVGKPQFNRQDHHKKKRVSTSWRKPRGQLSKQRRGIKGKGDTVEAGFRSPTAVRGKHPSGFEEVRVHNVDDLEGVDGDTEAVRIASKVGARKRERIEEEAEDAGIRVLNPTYVEV  236
                                   104       114       124       134       144       154       164       174       184       194       204       214       224       234  

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (29, 30)

Asymmetric/Biological Unit
(-)
Fold: RL5-like (90)
(-)
Class: Peptides (792)

(-) CATH Domains  (32, 36)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (23, 25)

Asymmetric/Biological Unit
(-)
Clan: KOW (56)
(-)
Clan: OB (224)
(-)
Clan: RRM (206)
(-)
Clan: Ribo_L29 (45)
(-)
Clan: S11_L18p (67)
(-)
Clan: TRASH (61)

(-) Gene Ontology  (23, 225)

Asymmetric/Biological Unit(hide GO term definitions)
Chain 2   (RL37_HALMA | P32410)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
    GO:0008270    zinc ion binding    Interacting selectively and non-covalently with zinc (Zn) ions.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain 3   (RL39_HALMA | P22452)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain 4   (RL44E_HALMA | P32411)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0070180    large ribosomal subunit rRNA binding    Interacting selectively and non-covalently with the large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
    GO:0000049    tRNA binding    Interacting selectively and non-covalently with transfer RNA.
    GO:0008270    zinc ion binding    Interacting selectively and non-covalently with zinc (Zn) ions.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain C   (RL2_HALMA | P20276)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0015934    large ribosomal subunit    The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site).
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain D   (RL3_HALMA | P20279)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain E   (RL4_HALMA | P12735)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain F   (RL5_HALMA | P14124)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
    GO:0000049    tRNA binding    Interacting selectively and non-covalently with transfer RNA.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain G   (RL6_HALMA | P14135)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain H   (RL7A_HALMA | P12743)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0004526    ribonuclease P activity    Catalysis of the endonucleolytic cleavage of RNA, removing 5' extra nucleotides from tRNA precursor.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0090501    RNA phosphodiester bond hydrolysis    The RNA metabolic process in which the phosphodiester bonds between ribonucleotides are cleaved by hydrolysis.
    GO:0090502    RNA phosphodiester bond hydrolysis, endonucleolytic    The chemical reactions and pathways involving the hydrolysis of internal 3',5'-phosphodiester bonds in one or two strands of ribonucleotides.
    GO:0042254    ribosome biogenesis    A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits; includes transport to the sites of protein synthesis.
    GO:0001682    tRNA 5'-leader removal    Generation of the mature 5'-end of the tRNA, usually via an endonucleolytic cleavage by RNase P.
    GO:0008033    tRNA processing    The process in which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group.
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain I   (RL10_HALMA | P15825)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0070180    large ribosomal subunit rRNA binding    Interacting selectively and non-covalently with the large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
biological process
    GO:0042254    ribosome biogenesis    A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits; includes transport to the sites of protein synthesis.
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain K   (RL13_HALMA | P29198)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0015934    large ribosomal subunit    The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site).
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain L   (RL14_HALMA | P22450)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain M   (RL15_HALMA | P12737)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0015934    large ribosomal subunit    The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site).
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain O   (RL18_HALMA | P14123)
molecular function
    GO:0008097    5S rRNA binding    Interacting selectively and non-covalently with 5S ribosomal RNA, the smallest RNA constituent of a ribosome.
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain P   (RL18E_HALMA | P12733)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain Q   (RL19E_HALMA | P14119)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0070180    large ribosomal subunit rRNA binding    Interacting selectively and non-covalently with the large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain R   (RL21_HALMA | P12734)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain S   (RL22_HALMA | P10970)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0015934    large ribosomal subunit    The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site).
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain T   (RL23_HALMA | P12732)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain U   (RL24_HALMA | P10972)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0015934    large ribosomal subunit    The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site).
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain V   (RL24E_HALMA | P14116)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
    GO:0008270    zinc ion binding    Interacting selectively and non-covalently with zinc (Zn) ions.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain W   (RL29_HALMA | P10971)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain X   (RL30_HALMA | P14121)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0015934    large ribosomal subunit    The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site).
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S)