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(-) Description

Title :  THE STRUCTURE OF CCPMN BOUND TO THE LARGE RIBOSOMAL SUBUNIT HALOARCULA MARISMORTUI
 
Authors :  T. M. Schmeing, T. A. Steitz
Date :  16 Dec 04  (Deposition) - 29 Nov 05  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.20
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,0,1,2,3,4,9
Keywords :  Ribosome 50S, Protein-Protein Complex, Rna-Rna Complex, Protein-Rna Complex, Peptidyl Transferase Reaction, Ribosome (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  T. M. Schmeing, K. S. Huang, D. E. Kitchen, S. A. Strobel, T. A. Steitz
Structural Insights Into The Roles Of Water And The 2' Hydroxyl Of The P Site Trna In The Peptidyl Transferase Reaction.
Mol. Cell V. 20 437 2005
PubMed-ID: 16285925  |  Reference-DOI: 10.1016/J.MOLCEL.2005.09.006

(-) Compounds

Molecule 1 - 23S RIBOSOMAL RNA
    Chains0
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 2 - 5S RIBOSOMAL RNA
    Chains9
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 3 - 5'-R(*CP*CP*(PPU))-3'
    Chains4
    EngineeredYES
    Other DetailsCYTIDINE-CYTIDINE-PUROMYCIN OLIGOMER
    SyntheticYES
 
Molecule 4 - 50S RIBOSOMAL PROTEIN L2P
    ChainsA
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 5 - 50S RIBOSOMAL PROTEIN L3P
    ChainsB
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 6 - 50S RIBOSOMAL PROTEIN L4E
    ChainsC
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 7 - 50S RIBOSOMAL PROTEIN L5P
    ChainsD
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 8 - 50S RIBOSOMAL PROTEIN L6P
    ChainsE
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 9 - 50S RIBOSOMAL PROTEIN L7AE
    ChainsF
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 10 - ACIDIC RIBOSOMAL PROTEIN P0 HOMOLOG
    ChainsG
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 11 - 50S RIBOSOMAL PROTEIN L10E
    ChainsH
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 12 - 50S RIBOSOMAL PROTEIN L13P
    ChainsJ
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 13 - 50S RIBOSOMAL PROTEIN L14P
    ChainsK
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 14 - 50S RIBOSOMAL PROTEIN L15P
    ChainsL
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 15 - 50S RIBOSOMAL PROTEIN L15E
    ChainsM
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 16 - 50S RIBOSOMAL PROTEIN L18P
    ChainsN
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 17 - 50S RIBOSOMAL PROTEIN L18E
    ChainsO
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 18 - 50S RIBOSOMAL PROTEIN L19E
    ChainsP
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 19 - 50S RIBOSOMAL PROTEIN L21E
    ChainsQ
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 20 - 50S RIBOSOMAL PROTEIN L22P
    ChainsR
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 21 - 50S RIBOSOMAL PROTEIN L23P
    ChainsS
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 22 - 50S RIBOSOMAL PROTEIN L24P
    ChainsT
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 23 - 50S RIBOSOMAL PROTEIN L24E
    ChainsU
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 24 - 50S RIBOSOMAL PROTEIN L29P
    ChainsV
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 25 - 50S RIBOSOMAL PROTEIN L30P
    ChainsW
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 26 - 50S RIBOSOMAL PROTEIN L31E
    ChainsX
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 27 - 50S RIBOSOMAL PROTEIN L32E
    ChainsY
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 28 - 50S RIBOSOMAL PROTEIN L37AE
    ChainsZ
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 29 - 50S RIBOSOMAL PROTEIN L37E
    Chains1
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 30 - 50S RIBOSOMAL PROTEIN L39E
    Chains2
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 31 - 50S RIBOSOMAL PROTEIN L44E
    Chains3
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238
 
Molecule 32 - 50S RIBOSOMAL PROTEIN L11P
    ChainsI
    Organism ScientificHALOARCULA MARISMORTUI
    Organism Taxid2238

 Structural Features

(-) Chains, Units

  1234567891011121314151617181920212223242526272829303132
Asymmetric/Biological Unit ABCDEFGHIJKLMNOPQRSTUVWXYZ012349

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (12, 318)

Asymmetric/Biological Unit (12, 318)
No.NameCountTypeFull Name
11MA1Mod. Nucleotide6-HYDRO-1-METHYLADENOSINE-5'-MONOPHOSPHATE
2CD5Ligand/IonCADMIUM ION
3CL22Ligand/IonCHLORIDE ION
4K2Ligand/IonPOTASSIUM ION
5MG94Ligand/IonMAGNESIUM ION
6NA75Ligand/IonSODIUM ION
7OMG1Mod. NucleotideO2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
8OMU1Mod. NucleotideO2'-METHYLURIDINE 5'-MONOPHOSPHATE
9PPU1Mod. NucleotidePUROMYCIN-5'-MONOPHOSPHATE
10PSU1Mod. NucleotidePSEUDOURIDINE-5'-MONOPHOSPHATE
11SR114Ligand/IonSTRONTIUM ION
12UR31Mod. Nucleotide3-METHYLURIDINE-5'-MONOPHOSHATE

(-) Sites  (309, 309)

Asymmetric Unit (309, 309)
No.NameEvidenceResiduesDescription
001AC1SOFTWAREG 0:2482 , A 0:2483 , A 0:2532 , C 0:2533 , C 0:2534 , HOH 0:4231 , HOH 0:8356BINDING SITE FOR RESIDUE MG 0 8001
002AC2SOFTWAREG 0:627 , A 0:2483 , C 0:2534 , U 0:2535 , HOH 0:8335 , HOH 0:9888BINDING SITE FOR RESIDUE MG 0 8002
003AC3SOFTWAREA 0:876 , G 0:877 , A 0:2624 , HOH 0:4283 , HOH A:9500 , HOH A:9523BINDING SITE FOR RESIDUE MG 0 8003
004AC4SOFTWAREG 0:456 , A 0:459 , HOH 0:3403 , HOH 0:4400 , HOH 0:8341 , HOH 0:9672BINDING SITE FOR RESIDUE MG 0 8004
005AC5SOFTWAREA 0:1836 , U 0:1838 , A 0:1839 , HOH 0:4227 , HOH 0:8357 , HOH 0:8358BINDING SITE FOR RESIDUE MG 0 8005
006AC6SOFTWAREU 0:919 , C 0:2464 , A 0:2465 , HOH 0:4245 , HOH 0:8350 , HOH 0:8432BINDING SITE FOR RESIDUE MG 0 8008
007AC7SOFTWAREU 0:2610 , G 0:2611 , A 0:2612 , HOH 0:4355 , HOH 0:7938 , HOH 0:8351 , NA 0:9158 , HOH 0:9962BINDING SITE FOR RESIDUE MG 0 8009
008AC8SOFTWAREG 0:28 , U 0:1304 , HOH 0:3269 , HOH 0:3849 , HOH 0:4264 , HOH 0:8433 , HOH 0:9664BINDING SITE FOR RESIDUE MG 0 8012
009AC9SOFTWAREG 0:877 , G 0:2623 , A 0:2624 , HOH 0:4258 , HOH A:9619BINDING SITE FOR RESIDUE MG 0 8013
010AD1SOFTWAREA 0:1746 , A 0:1747 , U 0:1748 , U 0:1749 , G 0:1752BINDING SITE FOR RESIDUE SR 0 9505
011AD2SOFTWAREA 0:632 , C 0:633 , A 0:2538 , U 0:2539 , HOH 0:5456 , HOH 0:8494BINDING SITE FOR RESIDUE SR 0 9506
012AD3SOFTWAREG 0:911 , G 0:1292 , HOH 0:3433 , HOH 0:3679 , HOH 0:4013 , HOH 0:4874BINDING SITE FOR RESIDUE SR 0 9508
013AD4SOFTWAREA 0:378 , G 0:379 , A 0:429 , HOH 0:5169 , HOH 0:7991BINDING SITE FOR RESIDUE SR 0 9509
014AD5SOFTWAREU 0:2663 , A 0:2811 , A 0:2812 , A 0:2816 , G 0:2817 , HOH 0:8491BINDING SITE FOR RESIDUE SR 0 9515
015AD6SOFTWAREC 0:1103 , HOH 0:3176 , GLU J:28BINDING SITE FOR RESIDUE SR 0 9517
016AD7SOFTWAREG 0:2700BINDING SITE FOR RESIDUE SR 0 9522
017AD8SOFTWAREA 0:2622 , G 0:2623 , HOH 0:5237 , HOH 0:6455 , HOH 0:7733BINDING SITE FOR RESIDUE SR 0 9529
018AD9SOFTWAREG 0:2617 , G 0:2618 , HOH 0:4243 , HOH 0:4339 , HOH 0:4436 , HOH 0:4503 , HOH 0:8368BINDING SITE FOR RESIDUE SR 0 9530
019BC1SOFTWAREA 0:2101 , G 0:2102 , G 0:2537 , HOH 0:4276 , HOH 0:8332BINDING SITE FOR RESIDUE MG 0 8014
020BC2SOFTWAREA 0:844 , A 0:1689 , HOH 0:4237 , HOH 0:8366 , HOH 0:9633 , HOH 0:9649BINDING SITE FOR RESIDUE MG 0 8015
021BC3SOFTWAREG 0:456 , HOH 0:3046 , HOH 0:8342 , GLY C:86 , HOH C:9161 , HOH C:9164 , HOH C:9271BINDING SITE FOR RESIDUE MG 0 8017
022BC4SOFTWAREA 0:2011 , HOH 0:4764 , HOH 0:7758 , HOH 0:8361 , HOH 0:8362 , HOH 0:8363BINDING SITE FOR RESIDUE MG 0 8019
023BC5SOFTWAREC 0:1830 , HOH 0:8345 , HOH 0:8364 , HOH 0:9747 , HOH 0:9750 , HOH 0:9824BINDING SITE FOR RESIDUE MG 0 8020
024BC6SOFTWAREG 0:2304 , HOH 0:3587 , HOH 0:4254 , HOH 0:4255 , HOH 0:8348 , HOH 0:8349BINDING SITE FOR RESIDUE MG 0 8021
025BC7SOFTWAREG 0:2097 , G 0:2540 , HOH 0:4486 , HOH 0:5320 , HOH 0:9736BINDING SITE FOR RESIDUE MG 0 8022
026BC8SOFTWAREA 0:1381 , HOH 0:3561 , HOH 0:5716 , HOH X:7830BINDING SITE FOR RESIDUE MG 0 8024
027BC9SOFTWAREU 0:1120 , G 0:1121 , HOH 0:4782 , HOH 0:8369BINDING SITE FOR RESIDUE MG 0 8025
028BD1SOFTWAREA 0:1427 , HOH 0:8329BINDING SITE FOR RESIDUE SR 0 9532
029BD2SOFTWAREU 0:2277 , U 0:2278 , G 0:2471 , HOH 0:3222 , HOH 0:4370 , HOH 0:4378BINDING SITE FOR RESIDUE SR 0 9534
030BD3SOFTWAREA 0:846 , G 0:1694 , G 0:1695BINDING SITE FOR RESIDUE SR 0 9539
031BD4SOFTWAREG 0:2609 , U 0:2610 , HOH 0:3919 , HOH 0:4338 , HOH 0:6190 , HOH 0:8109BINDING SITE FOR RESIDUE SR 0 9545
032BD5SOFTWAREA 0:1682 , HOH 0:4080 , HOH 0:4581 , HOH 0:6836 , HOH 0:7615BINDING SITE FOR RESIDUE SR 0 9547
033BD6SOFTWAREHOH 0:6307BINDING SITE FOR RESIDUE SR 0 9560
034BD7SOFTWAREG 0:834 , U 0:835 , HOH 0:4523 , HOH 0:5076 , HOH 0:6690BINDING SITE FOR RESIDUE SR 0 9566
035BD8SOFTWAREU 0:2461 , HOH 0:6806 , ASP 3:59BINDING SITE FOR RESIDUE SR 0 9568
036BD9SOFTWAREC 0:1536BINDING SITE FOR RESIDUE SR 0 9570
037CC1SOFTWAREC 0:2608 , G 0:2609 , U 0:2610 , HOH 0:3025 , HOH 0:8370 , HOH 0:8371BINDING SITE FOR RESIDUE MG 0 8026
038CC2SOFTWAREC 0:240 , G 0:269 , HOH 0:4489 , HOH 0:4628 , HOH 0:4769 , HOH 0:8437BINDING SITE FOR RESIDUE MG 0 8027
039CC3SOFTWAREA 0:1448 , U 0:1677 , HOH 0:4295 , HOH 0:4316 , HOH 0:4327 , HOH 0:8374BINDING SITE FOR RESIDUE MG 0 8028
040CC4SOFTWAREU 0:1503 , A 0:1504 , C 0:1679 , HOH 0:3837 , HOH 0:8376 , HOH 0:8378BINDING SITE FOR RESIDUE MG 0 8029
041CC5SOFTWAREU 0:1748 , U 0:1749 , HOH 0:4256 , HOH 0:8343 , HOH 0:8344 , HOH 0:8354BINDING SITE FOR RESIDUE MG 0 8030
042CC6SOFTWAREU 0:777 , C 0:778 , HOH 0:3897 , HOH 0:7970 , HOH 0:8380 , SR 0:9441 , HOH 1:9512BINDING SITE FOR RESIDUE MG 0 8031
043CC7SOFTWAREU 0:2115 , HOH 0:3613 , HOH 0:4803 , HOH 0:8381 , ALA A:196 , HOH A:9538BINDING SITE FOR RESIDUE MG 0 8032
044CC8SOFTWAREG 0:956 , HOH 0:4287 , HOH 0:8385 , HOH 0:8386 , HOH 0:8387 , HOH 0:9996BINDING SITE FOR RESIDUE MG 0 8036
045CC9SOFTWAREA 0:2553 , HOH 0:3758 , HOH 0:3832 , HOH 0:4265 , HOH 0:8441 , SR 0:9434 , HOH 0:9703BINDING SITE FOR RESIDUE MG 0 8037
046CD1SOFTWAREU 0:1996 , U 0:2589 , U 0:2590 , C 0:2591 , HOH 0:6184 , HOH 0:6500BINDING SITE FOR RESIDUE SR 0 9581
047CD2SOFTWAREA 0:1317 , HOH 0:7397 , SER Y:207BINDING SITE FOR RESIDUE SR 0 9585
048CD3SOFTWAREG 0:2102 , A 0:2103 , HOH 0:4230BINDING SITE FOR RESIDUE SR 0 9590
049CD4SOFTWAREG 0:2639BINDING SITE FOR RESIDUE SR 0 9601
050CD5SOFTWAREG 0:1376 , A 0:1693 , HOH 0:5087BINDING SITE FOR RESIDUE SR 0 9626
051CD6SOFTWAREU 0:1368 , HOH 0:5472 , HOH 0:6370 , HOH 0:6427 , HOH R:9463BINDING SITE FOR RESIDUE SR 0 9629
052CD7SOFTWAREA 9:3056 , A 9:3057 , HOH 9:7361BINDING SITE FOR RESIDUE MG 9 8095
053CD8SOFTWAREG 9:3021 , G 9:3022 , U 9:3055 , A 9:3057 , G 9:3058BINDING SITE FOR RESIDUE NA 9 9183
054CD9SOFTWAREHOH 0:5595 , C 9:3091 , HOH H:9528BINDING SITE FOR RESIDUE SR 9 9481
055DC1SOFTWAREHOH 0:4241 , HOH 0:4266 , HOH 0:4288 , HOH 0:4290 , HOH 0:8389 , HOH 0:9910BINDING SITE FOR RESIDUE MG 0 8038
056DC2SOFTWAREU 0:115 , HOH 0:3535 , HOH 0:4579 , HOH 0:5694 , HOH 0:6242 , HOH 0:8391BINDING SITE FOR RESIDUE MG 0 8039
057DC3SOFTWAREU 0:172 , U 0:392 , HOH 0:8443 , HOH M:9338BINDING SITE FOR RESIDUE MG 0 8040
058DC4SOFTWAREC 0:195 , G 0:196 , A 0:227 , C 0:228 , HOH 0:4720 , HOH 0:4814BINDING SITE FOR RESIDUE MG 0 8041
059DC5SOFTWAREU 0:1309 , U 0:1346 , HOH 0:3068 , HOH 0:4274 , HOH 0:5027 , HOH 0:8392BINDING SITE FOR RESIDUE MG 0 8042
060DC6SOFTWAREG 0:816 , G 0:817 , HOH 0:3440 , HOH 0:7927 , MG 0:8106 , HOH 0:8445BINDING SITE FOR RESIDUE MG 0 8043
061DC7SOFTWAREC 0:2048 , C 0:2088 , A 0:2089 , HOH 0:3915 , GLY R:65 , HOH R:9501BINDING SITE FOR RESIDUE MG 0 8044
062DC8SOFTWAREG 0:1979 , HOH 0:8393 , HOH 0:8446 , HOH 0:8448BINDING SITE FOR RESIDUE MG 0 8045
063DC9SOFTWAREG 0:1794 , HOH 0:7816 , HOH 0:8449 , HOH 0:8450BINDING SITE FOR RESIDUE MG 0 8046
064DD1SOFTWAREG 9:3078 , G 9:3102BINDING SITE FOR RESIDUE SR 9 9503
065DD2SOFTWAREHOH 9:120 , A 9:3044 , HOH 9:4351BINDING SITE FOR RESIDUE SR 9 9588
066DD3SOFTWAREG 0:1873 , HOH 0:4958 , ASP A:26 , LEU A:27 , GLU A:28 , ARG A:120BINDING SITE FOR RESIDUE MG A 8066
067DD4SOFTWARELYS A:178BINDING SITE FOR RESIDUE CL A 9309
068DD5SOFTWAREA 0:2633 , PHE A:201 , GLY A:202 , GLY A:203 , HIS A:208 , HOH A:9545 , HOH A:9588BINDING SITE FOR RESIDUE SR A 9436
069DD6SOFTWAREHOH 0:4958 , HOH 0:6509 , HOH 0:8481 , GLU A:28BINDING SITE FOR RESIDUE SR A 9437
070DD7SOFTWAREGLU A:28BINDING SITE FOR RESIDUE SR A 9497
071DD8SOFTWAREHOH 0:6977 , GLY B:337 , HOH B:9555 , HOH B:9658 , HOH B:9659 , HOH B:9660BINDING SITE FOR RESIDUE MG B 8055
072DD9SOFTWAREU 0:837 , HOH 0:7362 , GLN B:230 , HOH B:9586BINDING SITE FOR RESIDUE NA B 9161
073EC1SOFTWAREA 0:1098 , HOH 0:5101 , HOH 0:8463BINDING SITE FOR RESIDUE MG 0 8047
074EC2SOFTWAREC 0:2248 , HOH 0:7838BINDING SITE FOR RESIDUE MG 0 8050
075EC3SOFTWAREG 0:641 , A 0:1355 , HOH 0:4715 , HOH 0:8394 , HOH 0:8395BINDING SITE FOR RESIDUE MG 0 8051
076EC4SOFTWAREU 0:1125 , G 9:3090BINDING SITE FOR RESIDUE MG 0 8052
077EC5SOFTWAREC 0:162 , U 0:2276 , HOH 0:3064 , HOH 0:8347 , HOH 0:8396 , HOH 0:8397BINDING SITE FOR RESIDUE MG 0 8054
078EC6SOFTWAREA 0:2757 , HOH 0:4285 , HOH 0:8416 , ASN B:335 , HOH B:9543BINDING SITE FOR RESIDUE MG 0 8056
079EC7SOFTWAREU 0:1883 , U 0:2012 , G 0:2013 , GLN A:207BINDING SITE FOR RESIDUE MG 0 8057
080EC8SOFTWAREG 0:1884 , HOH 0:3016 , HOH 0:4381 , HOH 0:8399 , HOH A:9526BINDING SITE FOR RESIDUE MG 0 8058
081EC9SOFTWAREG 0:2618 , HOH 0:4339 , HOH 0:4405 , HOH 0:4503 , HOH 0:4665 , HOH 0:9663BINDING SITE FOR RESIDUE MG 0 8059
082ED1SOFTWAREHOH 0:3215 , ARG B:223 , LYS B:224 , HIS B:227BINDING SITE FOR RESIDUE CL B 9319
083ED2SOFTWAREHOH 0:3573 , HOH 0:3868 , ASN B:243 , SER B:245BINDING SITE FOR RESIDUE SR B 9458
084ED3SOFTWAREC 0:2672 , ARG B:25 , GLU B:163 , ARG B:310BINDING SITE FOR RESIDUE SR B 9521
085ED4SOFTWAREASP C:45 , THR C:94 , LYS C:96BINDING SITE FOR RESIDUE NA C 9104
086ED5SOFTWAREARG D:51 , PRO D:68BINDING SITE FOR RESIDUE NA D 9151
087ED6SOFTWAREHOH 0:5698BINDING SITE FOR RESIDUE SR F 9595
088ED7SOFTWAREA 0:1133 , G 0:1134 , TYR H:154 , ILE H:157 , THR H:158 , PRO H:159BINDING SITE FOR RESIDUE SR H 9486
089ED8SOFTWAREHOH 0:3116 , HOH 0:6340 , ARG J:60 , VAL J:61 , ILE J:63 , TYR J:69BINDING SITE FOR RESIDUE NA J 9146
090ED9SOFTWAREPRO E:36 , ASN J:126 , ILE J:127 , LYS J:128 , HOH J:4193BINDING SITE FOR RESIDUE CL J 9301
091FC1SOFTWAREG 0:175 , U 0:224 , G 0:393 , HOH 0:8402 , HOH 0:8403 , HOH 0:9797BINDING SITE FOR RESIDUE MG 0 8060
092FC2SOFTWAREA 0:1369 , U 0:2650 , HOH 0:8404 , HOH 0:8405 , HOH 0:8406BINDING SITE FOR RESIDUE MG 0 8061
093FC3SOFTWAREHOH 0:4794 , HOH 0:5628 , HOH 0:7540 , HOH 0:7945 , HOH 0:8340 , HOH 0:8415BINDING SITE FOR RESIDUE MG 0 8063
094FC4SOFTWAREG 0:782 , C 0:783 , HOH 0:3549 , HOH A:9511 , HOH A:9589 , HOH A:9620BINDING SITE FOR RESIDUE MG 0 8065
095FC5SOFTWAREA 0:1845 , U 0:1846 , G 0:1884 , HOH 0:8408 , ASN A:188 , ARG A:190BINDING SITE FOR RESIDUE MG 0 8067
096FC6SOFTWAREA 0:2569 , HOH 0:4369 , HOH 0:5421 , HOH 0:7217 , HOH 0:8468 , HOH E:920BINDING SITE FOR RESIDUE MG 0 8068
097FC7SOFTWAREA 0:166 , G 0:219 , HOH 0:4432 , HOH 0:5555 , HOH 0:6180 , HOH 0:9748BINDING SITE FOR RESIDUE MG 0 8070
098FC8SOFTWAREU 0:954 , C 0:2298 , HOH 0:3854 , HOH 0:4610 , HOH 0:8469BINDING SITE FOR RESIDUE MG 0 8072
099FC9SOFTWAREA 0:1286 , A 0:1287 , HOH 0:8409 , HOH 0:8410 , HOH W:7873 , HOH W:7874BINDING SITE FOR RESIDUE MG 0 8074
100FD1SOFTWAREPRO J:88 , LYS J:90BINDING SITE FOR RESIDUE CL J 9302
101FD2SOFTWAREHOH 0:6340 , GLY J:64 , ASN J:65 , TYR J:69BINDING SITE FOR RESIDUE CL J 9321
102FD3SOFTWAREHOH 0:4039 , HOH 0:4850 , HOH 0:6613 , ASN K:42 , HOH K:2121 , HOH K:7871BINDING SITE FOR RESIDUE MG K 8069
103FD4SOFTWAREG 0:2582 , A 0:2596 , LYS K:14 , SER K:33BINDING SITE FOR RESIDUE CL K 9312
104FD5SOFTWAREARG L:53BINDING SITE FOR RESIDUE CL L 9310
105FD6SOFTWAREHOH 0:4272 , HOH 0:9907 , ARG L:27 , GLU L:39 , HOH L:9432 , HOH L:9491BINDING SITE FOR RESIDUE SR L 9409
106FD7SOFTWARESER M:106 , PHE M:109 , PRO M:110 , LEU M:112 , HOH M:9423BINDING SITE FOR RESIDUE NA M 9147
107FD8SOFTWARESER M:106 , ARG M:113 , VAL M:114 , ARG M:158 , VAL M:159BINDING SITE FOR RESIDUE CL M 9318
108FD9SOFTWARELYS D:146 , ARG N:37 , LYS N:38 , ASN N:107BINDING SITE FOR RESIDUE CL N 9307
109GC1SOFTWAREA 0:907 , A 0:908 , HOH 0:4253 , HOH 0:4530 , HOH 0:5533 , HOH 0:8411BINDING SITE FOR RESIDUE MG 0 8075
110GC2SOFTWAREHOH 0:7393 , HOH 0:8417 , HOH 0:8418 , HOH 0:8470 , HOH 0:8471BINDING SITE FOR RESIDUE MG 0 8076
111GC3SOFTWAREA 0:165 , A 0:167 , C 0:168 , HOH 0:4226 , HOH 0:4232 , HOH 0:4244BINDING SITE FOR RESIDUE MG 0 8079
112GC4SOFTWAREA 0:1684 , U 0:1724 , HOH 0:4818 , HOH 0:5099 , HOH 0:7226 , HOH 0:8421 , HOH 0:8473BINDING SITE FOR RESIDUE MG 0 8080
113GC5SOFTWAREC 0:1436 , A 0:1437 , HOH 0:5750 , HOH 0:5836 , HOH 0:8482BINDING SITE FOR RESIDUE MG 0 8082
114GC6SOFTWAREC 0:1753 , A 0:1754 , HOH 0:4324 , HOH 0:6918 , HOH 0:8422 , HOH 0:8474BINDING SITE FOR RESIDUE MG 0 8083
115GC7SOFTWAREA 0:1742 , G 0:2033 , HOH 0:3379 , HOH 0:4251 , HOH 0:8423BINDING SITE FOR RESIDUE MG 0 8084
116GC8SOFTWAREG 0:2617 , G 0:2618 , HOH 0:3234 , HOH 0:4405 , HOH 0:4966 , HOH 0:5091BINDING SITE FOR RESIDUE MG 0 8085
117GC9SOFTWAREG 0:2540 , G 0:2611 , HOH 0:4901 , NA 0:9139 , HOH 0:9690 , HOH 0:9924BINDING SITE FOR RESIDUE MG 0 8088
118GD1SOFTWAREHOH 0:6586 , HIS O:40 , HOH O:5650BINDING SITE FOR RESIDUE CD O 9205
119GD2SOFTWAREHOH 0:7358 , HOH 0:7563 , ASN O:44BINDING SITE FOR RESIDUE CL O 9308
120GD3SOFTWAREASN Q:16 , ASP Q:20 , GLY Q:22 , SER Q:24 , SER Q:46 , HOH Q:1795 , HOH Q:5427BINDING SITE FOR RESIDUE NA Q 9148
121GD4SOFTWAREG 0:2660 , HOH 0:4365 , SER R:70 , VAL R:72 , NA R:9138 , HOH R:9435 , HOH R:9467BINDING SITE FOR RESIDUE NA R 9137
122GD5SOFTWAREU 0:2659 , G 0:2660 , VAL R:72 , TRP R:75 , NA R:9137 , HOH R:9426 , HOH R:9435BINDING SITE FOR RESIDUE NA R 9138
123GD6SOFTWAREU 0:12 , LYS R:60 , GLN R:61 , ASN R:63 , SR R:9418BINDING SITE FOR RESIDUE NA R 9186
124GD7SOFTWARELYS R:118 , HOH R:9420BINDING SITE FOR RESIDUE CL R 9306
125GD8SOFTWAREGLN R:61 , ASN R:63 , NA R:9186BINDING SITE FOR RESIDUE SR R 9418
126GD9SOFTWAREHIS S:7 , GLU S:61 , HOH S:9482BINDING SITE FOR RESIDUE NA S 9112
127HC1SOFTWAREC 0:515 , A 0:516 , U 0:517 , G 0:518 , HOH 0:8426 , HOH 0:8475 , HOH 0:8476BINDING SITE FOR RESIDUE MG 0 8089
128HC2SOFTWAREA 0:2103 , U 0:2478 , HOH 0:4412BINDING SITE FOR RESIDUE MG 0 8090
129HC3SOFTWAREG 0:918 , HOH 0:3179 , HOH 0:3944 , HOH 0:7039 , HOH 0:8427 , HOH 0:9717BINDING SITE FOR RESIDUE MG 0 8091
130HC4SOFTWAREA 0:1843 , C 0:1844 , HOH 0:3016 , HOH 0:4261 , HOH 0:8477BINDING SITE FOR RESIDUE MG 0 8092
131HC5SOFTWAREA 0:1070 , G 0:1071 , HOH 0:3316 , HOH 0:4267 , HOH 0:4299 , HOH 0:4340BINDING SITE FOR RESIDUE MG 0 8093
132HC6SOFTWAREU 0:1096 , C 0:1257 , G 0:1258 , HOH 0:8428BINDING SITE FOR RESIDUE MG 0 8094
133HC7SOFTWAREG 0:1848 , G 0:1849 , HOH 0:4280 , HOH 0:4317 , HOH 0:4450 , HOH 0:4481BINDING SITE FOR RESIDUE MG 0 8096
134HC8SOFTWAREU 0:862 , G 0:863 , HOH 0:3960 , HOH 0:4289 , HOH 0:6142BINDING SITE FOR RESIDUE MG 0 8097
135HC9SOFTWAREA 0:907 , HOH 0:3567 , HOH 0:3986 , HOH 0:4301 , HOH 0:4364 , HOH Y:9366BINDING SITE FOR RESIDUE MG 0 8098
136HD1SOFTWAREHOH 0:8470 , ASP S:59BINDING SITE FOR RESIDUE SR S 9470
137HD2SOFTWARETYR T:35 , GLN T:37 , LEU T:112 , SER T:114 , ASP T:117 , HOH T:2868BINDING SITE FOR RESIDUE MG T 8073
138HD3SOFTWARECYS U:6 , CYS U:9 , CYS U:32 , CYS U:36BINDING SITE FOR RESIDUE CD U 9201
139HD4SOFTWAREHIS Y:133 , LYS Y:136 , LYS Y:137 , VAL Y:139 , HOH Y:9359 , HOH Y:9380 , HOH Y:9413BINDING SITE FOR RESIDUE MG Y 8109
140HD5SOFTWAREG 0:1269 , HOH 0:3991 , ARG Y:169BINDING SITE FOR RESIDUE CL Y 9320
141HD6SOFTWARECYS Z:39 , CYS Z:42 , CYS Z:57 , CYS Z:60BINDING SITE FOR RESIDUE CD Z 9203
142HD7SOFTWARECYS 1:19 , CYS 1:22 , CYS 1:34 , CYS 1:37BINDING SITE FOR RESIDUE CD 1 9202
143HD8SOFTWAREU 0:862 , HOH 0:5481 , HOH 0:9795 , LYS 1:10 , ASN 1:12 , HOH 1:9499BINDING SITE FOR RESIDUE SR 1 9419
144HD9SOFTWAREHOH 0:3851 , HOH 0:4497 , HOH 0:9928 , ASP 1:47 , HOH 1:9474 , HOH 1:9486BINDING SITE FOR RESIDUE SR 1 9460
145IC1SOFTWAREA 0:2612 , HOH 0:3637 , HOH 0:4284 , HOH 0:4296BINDING SITE FOR RESIDUE MG 0 8099
146IC2SOFTWAREU 0:2107 , C 0:2281 , U 0:2282 , HOH 0:4363 , HOH 0:5224 , HOH 0:7451BINDING SITE FOR RESIDUE MG 0 8101
147IC3SOFTWAREA 0:2434 , U 0:2458 , HOH 0:8487 , HOH 0:9880 , HOH 3:9448 , HOH 3:9458BINDING SITE FOR RESIDUE MG 0 8102
148IC4SOFTWAREG 0:2578 , G 0:2579 , HOH 0:8479BINDING SITE FOR RESIDUE MG 0 8103
149IC5SOFTWAREC 0:2104 , C 0:2105 , HOH 0:8337BINDING SITE FOR RESIDUE MG 0 8104
150IC6SOFTWAREG 0:817 , HOH 0:4216 , HOH 0:7922 , HOH 0:7927 , MG 0:8043 , HOH 0:8445 , HOH P:182BINDING SITE FOR RESIDUE MG 0 8106
151IC7SOFTWAREC 0:1104 , A 0:1106 , A 0:1107 , HOH 0:8456 , HOH J:7851BINDING SITE FOR RESIDUE MG 0 8107
152IC8SOFTWAREHOH 0:7998 , HOH 0:8459 , HOH 0:8460BINDING SITE FOR RESIDUE MG 0 8108
153IC9SOFTWAREU 0:903 , A 0:1357 , HOH 0:3140 , HOH 0:4540 , HOH 0:5993 , HOH 0:6603BINDING SITE FOR RESIDUE MG 0 8110
154ID1SOFTWARECYS 3:11 , CYS 3:14 , CYS 3:71 , CYS 3:74BINDING SITE FOR RESIDUE CD 3 9204
155ID2SOFTWAREASP 3:66BINDING SITE FOR RESIDUE CL 3 9304
156ID3SOFTWAREHOH 0:4570 , HOH 0:8472 , GLY 3:45 , GLY 3:47 , ASP 3:49 , HOH 3:9505BINDING SITE FOR RESIDUE SR 3 9439
157JC1SOFTWAREA 0:187 , HOH 0:3201 , HOH 0:4343 , HOH 0:4385 , HOH 0:9753 , HOH 0:9959BINDING SITE FOR RESIDUE MG 0 8112
158JC2SOFTWAREA 0:2112 , HOH 0:3222 , HOH 0:4370 , HOH 0:4538 , HOH 0:6695 , HOH 0:6959BINDING SITE FOR RESIDUE MG 0 8113
159JC3SOFTWAREA 0:2430 , HOH 0:3082 , HOH 0:4578 , HOH 0:5417 , HOH 0:9977BINDING SITE FOR RESIDUE MG 0 8114
160JC4SOFTWAREHOH 0:4894 , HOH 0:4910 , HOH 0:7154 , HOH 0:7277 , HOH A:9542BINDING SITE FOR RESIDUE MG 0 8115
161JC5SOFTWAREU 0:1850 , HOH 0:4280 , HOH 0:4305 , HOH 0:4481 , HOH 0:7277 , HOH A:9542BINDING SITE FOR RESIDUE MG 0 8116
162JC6SOFTWAREA 0:1840 , C 0:1841 , A 0:2022 , HOH 0:5239 , HOH 0:7115 , HOH 0:9851BINDING SITE FOR RESIDUE MG 0 8117
163JC7SOFTWAREG 0:2605 , C 0:2608 , HOH 0:3475 , HOH 0:6265BINDING SITE FOR RESIDUE MG 0 8118
164JC8SOFTWAREG 0:2102 , G 0:2482 , C 0:2536BINDING SITE FOR RESIDUE K 0 9001
165JC9SOFTWAREC 0:162 , U 0:163 , U 0:172 , HOH 0:9641 , HOH 0:9772 , ARG M:82BINDING SITE FOR RESIDUE K 0 9002
166KC1SOFTWAREC 0:1069 , G 0:1072 , G 0:1087 , HOH 0:3791 , HOH 0:3821 , HOH 0:5567BINDING SITE FOR RESIDUE NA 0 9101
167KC2SOFTWAREG 0:1119 , U 0:1120 , G 0:1121 , U 0:1122 , HOH 0:4782 , HOH 0:8369BINDING SITE FOR RESIDUE NA 0 9102
168KC3SOFTWAREA 0:630 , A 0:631 , A 0:2074 , HOH 0:4701 , HOH 0:5301 , HOH 0:6368BINDING SITE FOR RESIDUE NA 0 9105
169KC4SOFTWAREG 0:2092 , G 0:2093 , G 0:2094 , A 0:2649 , HOH 0:9752BINDING SITE FOR RESIDUE NA 0 9106
170KC5SOFTWAREC 0:40 , G 0:41 , A 0:442 , C 0:443BINDING SITE FOR RESIDUE NA 0 9107
171KC6SOFTWAREC 0:1394 , U 0:1432 , G 0:1433 , U 0:1724 , HOH 0:4029 , SR 0:9473BINDING SITE FOR RESIDUE NA 0 9108
172KC7SOFTWAREA 0:2577 , G 0:2578 , G 0:2579 , HOH 0:5112BINDING SITE FOR RESIDUE NA 0 9110
173KC8SOFTWAREG 0:2524 , G 0:2525 , HOH 0:4192 , HOH 0:5256BINDING SITE FOR RESIDUE NA 0 9111
174KC9SOFTWAREG 0:2399 , HOH 0:3576 , HOH 0:4451 , HOH 0:5666 , HOH 0:5713BINDING SITE FOR RESIDUE NA 0 9113
175LC1SOFTWAREU 0:2541 , U 0:2607 , HOH 0:3753 , HOH 0:9960 , TRP B:242BINDING SITE FOR RESIDUE NA 0 9114
176LC2SOFTWAREA 0:165 , A 0:166 , A 0:167 , HOH 0:3319 , HOH 0:4226BINDING SITE FOR RESIDUE NA 0 9115
177LC3SOFTWAREC 0:896 , A 0:897 , HOH 0:6877 , HOH 0:8270BINDING SITE FOR RESIDUE NA 0 9116
178LC4SOFTWAREG 0:1416 , G 0:1417 , HOH 0:9904 , TRP 2:42 , ASN 2:45 , HOH 2:4135BINDING SITE FOR RESIDUE NA 0 9117
179LC5SOFTWAREG 0:2543 , G 0:2544 , HOH 0:4543 , HOH 0:8035 , NA 0:9120BINDING SITE FOR RESIDUE NA 0 9118
180LC6SOFTWAREG 0:2543 , G 0:2544 , U 0:2615 , HOH 0:3370 , NA 0:9118BINDING SITE FOR RESIDUE NA 0 9120
181LC7SOFTWAREC 0:2287 , G 0:2288 , ARG H:114BINDING SITE FOR RESIDUE NA 0 9122
182LC8SOFTWAREG 0:885 , A 0:2112 , G 0:2113 , C 0:2475 , C 0:2476 , HOH 0:5085BINDING SITE FOR RESIDUE NA 0 9123
183LC9SOFTWAREC 0:130 , U 0:146 , G 0:147 , HOH 0:3125 , HOH 0:4741 , HOH 0:7679BINDING SITE FOR RESIDUE NA 0 9124
184MC1SOFTWAREA 0:776 , U 0:777 , U 0:779 , HOH 0:3257 , HOH 0:3897 , SR 0:9441BINDING SITE FOR RESIDUE NA 0 9125
185MC2SOFTWAREG 0:1971 , G 0:2009 , A 0:2010 , U 0:2012BINDING SITE FOR RESIDUE NA 0 9126
186MC3SOFTWAREU 0:821 , C 0:853 , G 0:854 , U 0:1831 , HOH 0:3357 , HOH 0:3826BINDING SITE FOR RESIDUE NA 0 9127
187MC4SOFTWAREG 0:56 , A 0:59 , A 0:60 , G 0:61 , HOH 0:5807 , HOH 0:7034BINDING SITE FOR RESIDUE NA 0 9128
188MC5SOFTWAREG 0:66 , U 0:107 , U 0:108BINDING SITE FOR RESIDUE NA 0 9129
189MC6SOFTWAREC 0:141 , G 0:142 , HOH 0:9861BINDING SITE FOR RESIDUE NA 0 9130
190MC7SOFTWAREU 0:170 , C 0:171 , C 0:218 , G 0:221 , HOH 0:3183 , HOH 0:9927BINDING SITE FOR RESIDUE NA 0 9131
191MC8SOFTWAREG 0:386 , G 0:387 , G 0:388 , U 0:402BINDING SITE FOR RESIDUE NA 0 9132
192MC9SOFTWAREC 0:1894 , A 0:1895 , G 0:1896 , U 0:1897 , HOH 0:5842 , HOH 0:8490BINDING SITE FOR RESIDUE NA 0 9134
193NC1SOFTWAREG 0:622 , U 0:623 , 1MA 0:628 , A 0:630 , HOH 0:3498BINDING SITE FOR RESIDUE NA 0 9135
194NC2SOFTWAREG 0:1706 , G 0:1707 , HOH 0:3548 , HOH 0:5934 , HOH 0:7863 , HOH 0:8273BINDING SITE FOR RESIDUE NA 0 9136
195NC3SOFTWAREG 0:2540 , G 0:2611 , G 0:2616 , U 0:2645 , HOH 0:3649 , HOH 0:4901 , MG 0:8088BINDING SITE FOR RESIDUE NA 0 9139
196NC4SOFTWAREU 0:1740 , U 0:1741 , G 0:2033 , HOH 0:3657 , HOH 0:6840 , HOH 0:7361BINDING SITE FOR RESIDUE NA 0 9140
197NC5SOFTWAREG 0:681 , G 0:683 , HOH 0:4633 , HOH 0:8483BINDING SITE FOR RESIDUE NA 0 9141
198NC6SOFTWAREU 0:308 , U 0:335 , A 0:339 , C 0:342 , SER T:94 , ASN T:95 , HOH T:1124BINDING SITE FOR RESIDUE NA 0 9143
199NC7SOFTWAREA 0:914 , C 0:915 , C 0:1043 , C 0:1044 , G 0:1045BINDING SITE FOR RESIDUE NA 0 9149
200NC8SOFTWAREU 0:623 , U 0:624 , G 0:901 , HOH 0:7499BINDING SITE FOR RESIDUE NA 0 9150
201NC9SOFTWAREA 0:955 , HOH 0:7158 , C 9:3081 , U 9:3082BINDING SITE FOR RESIDUE NA 0 9152
202OC1SOFTWAREU 0:768 , C 0:769 , G 0:2111 , A 0:2112 , HOH 0:5418BINDING SITE FOR RESIDUE NA 0 9154
203OC2SOFTWAREG 0:1119 , C 0:1243 , HOH 0:5410 , THR J:47BINDING SITE FOR RESIDUE NA 0 9155
204OC3SOFTWAREC 0:920 , U 0:2278 , G 0:2279 , A 0:2463 , A 0:2467 , HOH 0:3086BINDING SITE FOR RESIDUE NA 0 9156
205OC4SOFTWAREG 0:941 , U 0:942 , G 0:1024 , HOH 0:6839BINDING SITE FOR RESIDUE NA 0 9157
206OC5SOFTWAREG 0:2611 , HOH 0:3117 , MG 0:8009 , HOH 0:9962 , TRP B:242BINDING SITE FOR RESIDUE NA 0 9158
207OC6SOFTWAREG 0:898 , A 0:922 , A 0:923 , G 0:924 , U 0:2109 , HOH 0:6239BINDING SITE FOR RESIDUE NA 0 9159
208OC7SOFTWAREA 0:453 , U 0:454 , C 0:478 , G 0:479 , HOH 0:6529BINDING SITE FOR RESIDUE NA 0 9160
209OC8SOFTWAREA 0:167 , C 0:168 , G 0:2110 , G 0:2111 , U 0:2277 , HOH 0:5904BINDING SITE FOR RESIDUE NA 0 9162
210OC9SOFTWAREU 0:1359 , C 0:1360 , HOH 0:4095 , HOH 0:7578BINDING SITE FOR RESIDUE NA 0 9163
211PC1SOFTWAREU 0:2057 , G 0:2058BINDING SITE FOR RESIDUE NA 0 9164
212PC2SOFTWAREU 0:391 , U 0:392 , U 0:398 , C 0:399 , LYS M:193 , ALA M:194BINDING SITE FOR RESIDUE NA 0 9165
213PC3SOFTWAREG 0:544 , G 0:545 , G 0:610 , U 0:611 , HOH 0:3511 , HOH 0:4437 , HOH 0:4496BINDING SITE FOR RESIDUE NA 0 9166
214PC4SOFTWAREG 0:464 , G 0:475 , HOH 0:3456 , HOH 0:5084 , HOH 0:5207 , ARG C:55BINDING SITE FOR RESIDUE NA 0 9167
215PC5SOFTWAREG 0:798 , G 0:814 , U 0:815BINDING SITE FOR RESIDUE NA 0 9168
216PC6SOFTWAREU 0:392 , A 0:395 , HOH 0:3378 , HOH 0:7127 , HOH 0:7629 , SR 0:9461 , ARG 3:42 , ASN 3:43BINDING SITE FOR RESIDUE NA 0 9169
217PC7SOFTWAREA 0:2022 , HOH 0:4392BINDING SITE FOR RESIDUE NA 0 9170
218PC8SOFTWAREG 0:2491 , U 0:2492 , G 0:2529BINDING SITE FOR RESIDUE NA 0 9171
219PC9SOFTWAREU 0:919 , G 0:924 , HOH 0:9900BINDING SITE FOR RESIDUE NA 0 9172
220QC1SOFTWAREG 0:1576 , U 0:1577 , G 0:1618 , G 0:1619 , C 0:1620 , HOH 0:4297 , HOH 0:7820BINDING SITE FOR RESIDUE NA 0 9173
221QC2SOFTWAREC 0:195 , G 0:196 , A 0:415 , G 0:416 , HOH 0:3523BINDING SITE FOR RESIDUE NA 0 9174
222QC3SOFTWAREG 0:868 , G 0:869 , A 0:886 , G 0:887 , HOH 0:9891BINDING SITE FOR RESIDUE NA 0 9175
223QC4SOFTWAREG 0:911 , U 0:1293 , G 0:1295 , HOH 0:6906BINDING SITE FOR RESIDUE NA 0 9177
224QC5SOFTWAREC 0:762 , G 0:902 , U 0:903 , HOH 0:3830 , HIS L:18 , HOH L:9424 , HOH L:9447BINDING SITE FOR RESIDUE NA 0 9178
225QC6SOFTWAREU 0:831 , U 0:832 , G 0:833 , HOH 0:4330 , HOH 0:5035 , HOH 0:5606BINDING SITE FOR RESIDUE NA 0 9179
226QC7SOFTWAREG 0:2585 , U 0:2586 , OMU 0:2587 , G 0:2592 , HOH 0:4307 , HOH 0:7605 , HOH 0:9958BINDING SITE FOR RESIDUE NA 0 9181
227QC8SOFTWAREG 0:2772 , G 0:2773BINDING SITE FOR RESIDUE NA 0 9182
228QC9SOFTWAREC 0:197 , HOH 0:5845 , HOH 0:7126BINDING SITE FOR RESIDUE NA 0 9184
229RC1SOFTWAREA 0:1079 , HOH 0:5787 , HOH 0:8266BINDING SITE FOR RESIDUE NA 0 9185
230RC2SOFTWAREG 0:1452 , G 0:1676 , HOH 0:6397BINDING SITE FOR RESIDUE CL 0 9303
231RC3SOFTWAREC 0:197 , G 0:201BINDING SITE FOR RESIDUE CL 0 9305
232RC4SOFTWAREC 0:2388 , HOH 0:3785 , PHE Q:52 , HIS Q:53BINDING SITE FOR RESIDUE CL 0 9311
233RC5SOFTWAREG 0:1300 , A 0:1328 , A 0:1329 , HOH 0:5261 , HOH 0:5548BINDING SITE FOR RESIDUE CL 0 9313
234RC6SOFTWAREG 0:644 , HOH 0:8302 , HIS L:13BINDING SITE FOR RESIDUE CL 0 9314
235RC7SOFTWAREA 0:1597 , A 0:1598 , G 0:1646BINDING SITE FOR RESIDUE CL 0 9315
236RC8SOFTWAREG 0:1119 , C 0:1243 , LYS J:56BINDING SITE FOR RESIDUE CL 0 9316
237RC9SOFTWAREC 0:594 , U 0:595 , HOH Y:9353BINDING SITE FOR RESIDUE CL 0 9317
238SC1SOFTWAREG 0:1072 , G 0:1087 , A 0:1291BINDING SITE FOR RESIDUE CL 0 9322
239SC2SOFTWAREG 0:824 , G 0:854 , HOH 0:4571 , HOH 0:4899 , HOH 0:5031 , HOH 0:5136BINDING SITE FOR RESIDUE SR 0 9405
240SC3SOFTWAREG 0:836 , U 0:2615 , HOH 0:4455 , HOH 0:9898 , HOH 0:9990 , GLN B:230BINDING SITE FOR RESIDUE SR 0 9406
241SC4SOFTWAREG 0:1489 , G 0:1491 , HOH 0:3028 , HOH 0:4248 , HOH 0:4569 , HOH 0:6738BINDING SITE FOR RESIDUE SR 0 9407
242SC5SOFTWAREU 0:832 , A 0:1839 , A 0:1840 , HOH 0:3975 , HOH 0:8346 , HOH 0:9635 , HOH 0:9726BINDING SITE FOR RESIDUE SR 0 9408
243SC6SOFTWAREA 0:643 , C 0:1353 , G 0:1354 , HOH 0:3062 , HOH 0:7135 , HOH 0:8493BINDING SITE FOR RESIDUE SR 0 9410
244SC7SOFTWAREA 0:1754 , A 0:1755 , HOH 0:7143 , HOH 0:7693 , HOH 0:8179BINDING SITE FOR RESIDUE SR 0 9411
245SC8SOFTWAREC 0:893 , HOH 0:6215 , HOH 0:8492 , HOH C:9145BINDING SITE FOR RESIDUE SR 0 9412
246SC9SOFTWAREG 0:1055 , HOH 0:4443 , HOH 0:5427 , HOH 0:6894 , ASP H:10 , HOH H:9505BINDING SITE FOR RESIDUE SR 0 9413
247TC1SOFTWAREU 0:146 , G 0:147 , G 0:182 , A 0:183 , ASP M:157 , HOH M:9440BINDING SITE FOR RESIDUE SR 0 9414
248TC2SOFTWAREHOH 0:4384 , HOH 0:6095 , HOH 0:6720 , HOH 0:7147 , HOH 0:7435 , HOH 0:8429 , HOH 0:8430BINDING SITE FOR RESIDUE SR 0 9415
249TC3SOFTWAREA 0:1747 , U 0:1748 , U 0:1749 , G 0:2585 , HOH 0:3309BINDING SITE FOR RESIDUE SR 0 9416
250TC4SOFTWAREC 0:85 , A 0:86 , C 0:87 , ASP T:68 , HOH T:4403BINDING SITE FOR RESIDUE SR 0 9417
251TC5SOFTWAREHOH 0:3792 , HOH 0:4763 , HOH 0:5477 , HOH 0:5812BINDING SITE FOR RESIDUE SR 0 9420
252TC6SOFTWAREU 0:664 , G 0:681 , HOH 0:7473 , HOH C:9140BINDING SITE FOR RESIDUE SR 0 9421
253TC7SOFTWAREC 0:1420 , C 0:1421 , G 0:1438 , HOH 0:4710 , HOH 0:6029 , HOH 0:6353BINDING SITE FOR RESIDUE SR 0 9422
254TC8SOFTWAREU 0:454 , C 0:478 , HOH 0:4832 , HOH 0:6234 , HOH 0:6712BINDING SITE FOR RESIDUE SR 0 9423
255TC9SOFTWAREA 0:1504 , A 0:1678 , C 0:1679 , HOH 0:8359 , HOH 0:8360BINDING SITE FOR RESIDUE SR 0 9424
256UC1SOFTWAREG 0:2543 , C 0:2608 , HOH 0:8496 , HOH 4:7912BINDING SITE FOR RESIDUE SR 0 9425
257UC2SOFTWAREG 0:2632 , HOH 0:3917 , HOH 0:5148 , HOH 0:6070BINDING SITE FOR RESIDUE SR 0 9426
258UC3SOFTWAREA 0:1717 , G 0:1718 , HOH 0:5156 , HOH 0:5938 , HOH 0:6945BINDING SITE FOR RESIDUE SR 0 9427
259UC4SOFTWAREG 0:471 , HOH 0:3661 , HOH 0:5007 , HOH 0:6205 , HOH 0:8064 , HOH 0:9830 , HOH 0:9869BINDING SITE FOR RESIDUE SR 0 9428
260UC5SOFTWAREG 0:1059 , C 0:1127 , HOH 0:4439 , HOH 0:5468 , HOH 0:5911 , HOH 0:9741BINDING SITE FOR RESIDUE SR 0 9429
261UC6SOFTWAREA 0:639 , G 0:640 , HOH 0:3261 , HOH 0:3528 , HOH 0:4599 , HOH 0:5419 , HOH 0:5860 , HOH 0:6619BINDING SITE FOR RESIDUE SR 0 9430
262UC7SOFTWAREG 0:2725 , G 0:2755 , HOH 0:4430 , HOH 0:5659 , HOH 0:6904 , HOH 0:7220BINDING SITE FOR RESIDUE SR 0 9431
263UC8SOFTWAREG 0:503BINDING SITE FOR RESIDUE SR 0 9432
264UC9SOFTWAREHOH 0:3961 , HOH 0:6364 , HOH 0:7005BINDING SITE FOR RESIDUE SR 0 9433
265VC1SOFTWAREA 0:2553 , HOH 0:3221 , HOH 0:3758 , HOH 0:4265 , MG 0:8037BINDING SITE FOR RESIDUE SR 0 9434
266VC2SOFTWAREU 0:1109 , G 0:1110 , A 0:1247 , HOH 0:4071 , HOH 0:7508BINDING SITE FOR RESIDUE SR 0 9435
267VC3SOFTWAREG 0:1543 , HOH 0:5584 , HOH 0:6651 , HOH 0:6662BINDING SITE FOR RESIDUE SR 0 9438
268VC4SOFTWAREA 0:532 , U 0:533 , HOH 0:4349 , HOH 0:4589 , HOH 0:8424 , HOH 0:8425BINDING SITE FOR RESIDUE SR 0 9440
269VC5SOFTWAREU 0:777 , U 0:864 , HOH 0:3257 , HOH 0:3897 , HOH 0:4289 , HOH 0:4293 , HOH 0:7981 , MG 0:8031 , NA 0:9125BINDING SITE FOR RESIDUE SR 0 9441
270VC6SOFTWAREG 0:2421 , U 0:2422 , C 0:2423 , HOH 0:8452 , HOH 0:8453BINDING SITE FOR RESIDUE SR 0 9442
271VC7SOFTWAREA 0:1291 , G 0:1292 , HOH 0:3842 , HOH 0:4229 , HOH 0:7971 , HOH 0:8434BINDING SITE FOR RESIDUE SR 0 9443
272VC8SOFTWAREC 0:880 , A 0:882 , U 0:883 , HOH 0:4238 , HOH 0:8419 , HOH 0:8420 , HOH 0:9868BINDING SITE FOR RESIDUE SR 0 9444
273VC9SOFTWAREHOH 0:4902 , HOH 0:7057 , HOH 0:8131BINDING SITE FOR RESIDUE SR 0 9445
274WC1SOFTWAREHOH 0:5616 , HOH 0:5774 , HOH 0:6704BINDING SITE FOR RESIDUE SR 0 9446
275WC2SOFTWAREG 0:84 , C 0:85 , HOH 0:6194 , ASP T:68 , HOH T:4403BINDING SITE FOR RESIDUE SR 0 9447
276WC3SOFTWAREA 0:2465 , G 0:2466 , HOH 0:4869 , HOH 0:8489 , HOH 0:9687 , ASP L:36BINDING SITE FOR RESIDUE SR 0 9448
277WC4SOFTWAREG 0:1683 , U 0:1696 , HOH 0:3413 , HOH 0:5359 , HOH 0:5438BINDING SITE FOR RESIDUE SR 0 9449
278WC5SOFTWAREA 0:2746 , U 0:2749 , G 0:2750 , HOH 0:6457 , HOH 0:6826 , HOH 0:8486BINDING SITE FOR RESIDUE SR 0 9450
279WC6SOFTWAREA 0:1885 , A 0:1886 , U 0:1887 , HOH 0:6686 , HOH 0:7898BINDING SITE FOR RESIDUE SR 0 9451
280WC7SOFTWAREU 0:2016 , HOH 0:8160BINDING SITE FOR RESIDUE SR 0 9452
281WC8SOFTWAREG 0:1484 , HOH 0:4332 , HOH 0:8383 , HOH 0:8384 , HOH 0:8439 , HOH 0:8440BINDING SITE FOR RESIDUE SR 0 9453
282WC9SOFTWAREG 0:2091 , HOH 0:3707 , HOH 0:6671 , HOH 0:7228BINDING SITE FOR RESIDUE SR 0 9454
283XC1SOFTWAREC 0:1690 , HOH 0:3077 , HOH 0:4360 , HOH 0:4662 , HOH 0:5306BINDING SITE FOR RESIDUE SR 0 9455
284XC2SOFTWAREA 0:2302 , A 0:2303 , HOH 0:4259 , HOH 0:4387 , HOH 0:5465 , HOH 0:8382BINDING SITE FOR RESIDUE SR 0 9456
285XC3SOFTWAREU 0:821 , C 0:822 , G 0:854 , U 0:855 , HOH 0:3435 , HOH 0:4233 , HOH 0:4371BINDING SITE FOR RESIDUE SR 0 9457
286XC4SOFTWAREG 0:2696BINDING SITE FOR RESIDUE SR 0 9459
287XC5SOFTWAREU 0:391 , HOH 0:3647 , HOH 0:6028 , HOH 0:6149 , NA 0:9169 , ARG 3:42BINDING SITE FOR RESIDUE SR 0 9461
288XC6SOFTWAREG 0:2810 , HOH 0:4659 , HOH 0:8188 , ASN B:27BINDING SITE FOR RESIDUE SR 0 9462
289XC7SOFTWAREU 0:2557 , HOH 0:3678 , HOH 0:7212BINDING SITE FOR RESIDUE SR 0 9464
290XC8SOFTWAREA 0:682 , G 0:683 , HOH 0:8483 , HOH 0:8495BINDING SITE FOR RESIDUE SR 0 9465
291XC9SOFTWAREC 0:1462 , A 0:1463 , HOH 0:6776 , GLY 1:40BINDING SITE FOR RESIDUE SR 0 9466
292YC1SOFTWAREA 0:1133 , G 0:1134 , HOH 0:3058 , HOH 0:4979 , HOH 0:5392BINDING SITE FOR RESIDUE SR 0 9467
293YC2SOFTWAREU 0:1972 , HOH 0:3302 , HOH 0:3922BINDING SITE FOR RESIDUE SR 0 9468
294YC3SOFTWAREG 0:1113 , HOH 0:4311 , HOH 0:4321BINDING SITE FOR RESIDUE SR 0 9469
295YC4SOFTWAREU 0:1432 , G 0:1433 , U 0:1724 , HOH 0:4057 , HOH 0:4206 , HOH 0:5271 , NA 0:9108BINDING SITE FOR RESIDUE SR 0 9473
296YC5SOFTWAREG 0:2284 , HOH 0:6106 , HOH 0:7730BINDING SITE FOR RESIDUE SR 0 9474
297YC6SOFTWAREG 0:2777 , HOH 0:4811 , HOH 0:7876BINDING SITE FOR RESIDUE SR 0 9475
298YC7SOFTWAREA 0:1815 , HOH 0:8148 , HOH 0:8413 , HOH 0:8414BINDING SITE FOR RESIDUE SR 0 9477
299YC8SOFTWAREC 0:235 , HOH 0:5302 , HOH 0:6039 , HOH 0:6172 , HOH 0:6721 , HOH 0:8152BINDING SITE FOR RESIDUE SR 0 9478
300YC9SOFTWAREU 0:2690 , HOH 0:3673 , HOH 0:6124BINDING SITE FOR RESIDUE SR 0 9480
301ZC1SOFTWAREA 0:1040 , G 0:1295 , A 0:1296 , HOH 0:5473 , HOH 0:9840 , GLY L:14 , HOH L:9490BINDING SITE FOR RESIDUE SR 0 9482
302ZC2SOFTWAREA 0:565 , G 0:592BINDING SITE FOR RESIDUE SR 0 9483
303ZC3SOFTWAREHOH 0:7008 , HOH 0:7821 , HOH 0:7965 , HOH 0:8269BINDING SITE FOR RESIDUE SR 0 9488
304ZC4SOFTWAREU 0:1835 , HOH 0:3600 , HOH 0:8192BINDING SITE FOR RESIDUE SR 0 9489
305ZC5SOFTWAREC 0:1894 , U 0:1897 , G 0:1898 , U 0:1939BINDING SITE FOR RESIDUE SR 0 9490
306ZC6SOFTWAREHOH 0:5153 , HOH 0:6107 , HOH 0:7747BINDING SITE FOR RESIDUE SR 0 9495
307ZC7SOFTWAREC 0:1129 , HOH 0:4239 , HOH 0:6666 , HOH 0:7463 , HOH 0:8465 , C 9:3091 , G 9:3092 , HOH 9:3843BINDING SITE FOR RESIDUE SR 0 9498
308ZC8SOFTWAREG 0:33 , C 0:34 , U 0:457 , HOH C:9150BINDING SITE FOR RESIDUE SR 0 9500
309ZC9SOFTWAREG 0:1290 , A 0:1291 , HOH 0:5560 , HOH 0:8434BINDING SITE FOR RESIDUE SR 0 9504

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1VQO)

(-) Cis Peptide Bonds  (6, 6)

Asymmetric/Biological Unit
No.Residues
1Trp A:186 -Pro A:187
2Gly B:14 -Pro B:15
3Asn B:243 -Pro B:244
4Val C:136 -Pro C:137
5Gln F:55 -Pro F:56
6Arg M:184 -Pro M:185

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (2, 2)

Asymmetric/Biological Unit (2, 2)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_RL6_HALMA_001 *R3SRL6_HALMA  ---  ---ER2S
2UniProtVAR_RL6_HALMA_002 *E24SRL6_HALMA  ---  ---EE23S
   * ID not provided by source

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (26, 26)

Asymmetric/Biological Unit (26, 26)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1RIBOSOMAL_L37EPS01077 Ribosomal protein L37e signature.RL37_HALMA5-24  11:4-23
2RIBOSOMAL_L19EPS00526 Ribosomal protein L19e signature.RL19E_HALMA7-26  1P:6-25
3RIBOSOMAL_L24EPS01073 Ribosomal protein L24e signature.RL24E_HALMA9-26  1U:8-25
4RIBOSOMAL_L30PS00634 Ribosomal protein L30 signature.RL30_HALMA20-52  1W:20-52
5RIBOSOMAL_L39EPS00051 Ribosomal protein L39e signature.RL39_HALMA29-45  12:28-44
6RIBOSOMAL_L18EPS01106 Ribosomal protein L18e signature.RL18E_HALMA32-49  1O:31-48
7RIBOSOMAL_L21EPS01171 Ribosomal protein L21e signature.RL21_HALMA37-62  1Q:36-61
8RIBOSOMAL_L5PS00358 Ribosomal protein L5 signature.RL5_HALMA42-58  1D:41-57
9RIBOSOMAL_L29PS00579 Ribosomal protein L29 signature.RL29_HALMA43-57  1V:42-56
10RIBOSOMAL_L24PS01108 Ribosomal protein L24 signature.RL24_HALMA46-63  1T:45-62
11RIBOSOMAL_L15EPS01194 Ribosomal protein L15e signature.RL15E_HALMA48-71  1M:47-70
12RIBOSOMAL_L31EPS01144 Ribosomal protein L31e signature.RL31_HALMA49-63  1X:48-62
13RIBOSOMAL_L44EPS01172 Ribosomal protein L44e signature.RL44E_HALMA60-71  13:60-71
14RIBOSOMAL_L23PS00050 Ribosomal protein L23 signature.RL23_HALMA63-78  1S:62-77
15RIBOSOMAL_L7AEPS01082 Ribosomal protein L7Ae signature.RL7A_HALMA68-85  1F:67-84
16RIBOSOMAL_L14PS00049 Ribosomal protein L14 signature.RL14_HALMA71-97  1K:71-97
17RIBOSOMAL_L13PS00783 Ribosomal protein L13 signature.RL13_HALMA83-106  1J:83-106
18RIBOSOMAL_L1EPS00939 Ribosomal protein L1e signature.RL4_HALMA103-129  1C:103-129
19RIBOSOMAL_L15PS00475 Ribosomal protein L15 signature.RL15_HALMA108-138  1L:107-137
20RIBOSOMAL_L10EPS01257 Ribosomal protein L10e signature.RL10E_HALMA109-130  1H:111-127
21RIBOSOMAL_L11PS00359 Ribosomal protein L11 signature.RL11_HALMA122-137  1I:126-140
22RIBOSOMAL_L22PS00464 Ribosomal protein L22 signature.RL22_HALMA124-148  1R:123-147
23RIBOSOMAL_L32EPS00580 Ribosomal protein L32e signature.RL32_HALMA129-149  1Y:128-148
24RIBOSOMAL_L6_2PS00700 Ribosomal protein L6 signature 2.RL6_HALMA151-172  1E:150-171
25RIBOSOMAL_L2PS00467 Ribosomal protein L2 signature.RL2_HALMA188-199  1A:187-198
26RIBOSOMAL_L3PS00474 Ribosomal protein L3 signature.RL3_HALMA195-218  1B:194-217

(-) Exons   (0, 0)

(no "Exon" information available for 1VQO)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain 0 from PDB  Type:RNA  Length:2754
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
                1vqo 0   10 UAUGCCAGCUGGUGGAUUGCUCGGCUCAGGCGCUGAUGAAGGACGUGCCAAGCUGCGAUAAGCCAUGGGGAGCCGCACGGAGGCGAAGAACCAUGGAUUUCCGAAUGAGAAUCUCUAACAAUUGCUUCGCGCAAUGAGGAACCCCGAGAACUGAAACAUCUCAGUAUCGGGAGGAACAGAAAACGCAAUGUGAUGUCGUUAGUAACCGCGAGUGAACGCGAUACAGCCCAAACCGAAGCCCUCACGGGCAAUGUGGUGUCAGGGCUACCUCUCAUCAGCCGACCGUCUCGACGAAGUCUCUUGGAACAGAGCGUGAUACAGGGUGACAACCCCGUACUCGAGACCAGUACGACGUGCGGUAGUGCCAGAGUAGCGGGGGUUGGAUAUCCCUCGCGAAUAACGCAGGCAUCGACUGCGAAGGCUAAACACAACCUGAGACCGAUAGUGAACAAGUAGUGUGAACGAACGCUGCAAAGUACCCUCAGAAGGGAGGCGAAAUAGAGCAUGAAAUCAGUUGGCGAUCGAGCGACAGGGCAUACAAGGUCCCUCGACGAAUGACCGACGCGCGAGCGUCCAGUAAGACUCACGGGAAGCCGAUGUUCUGUCGUACGUUUUGaAAAACGAGCCAGGGAGUGUGUCUGCAUGGCAAGUCUAACCGGAGUAUCCGGGGAGGCACAGGGAAACCGACAUGGCCGCAGGGCUUGCCCGAGGGCCGCCGUCUUCAAGGGCGGGGAGCCAUGUGGACACGACCCGAAUCCGGACGAUCUACGCAUGGACAAGAUGAAGCGUGCCGAAAGGCACGUGGAAGUCUGUUAGAGUUGGUGUCCUACAAUACCCUCUCGUGAUCUAUGUGUAGGGGUGAAAGGCCCAUCGAGUCCGGCAACAGCUGGUUCCAAUCGAAACAUGUCGAAGCAUGACCUCCGCCGAGGUAGUCUGUGAGGUAGAGCGACCGAUUGGUCCUGUCAAACUCCAAACUUACAGACGCCGUUUGACGCGGGGAUUCCGGUGCGCGGGGUAAGCCUGUGUACCAGGAGGGGAACAACCCAGAGAUAGGUUAAGGUCCCCAAGUGUGGAUUAAGUGUAAUCCUCUGAAGGUGGUCUCGAGCCCUAGACAGCCGGGAGGUGAGCUUAGAAGCAGCUACCCUCUAAGAAAAGCGUAACAGCUUACCGGCCGAGGUUUGAGGCGCCCAAAAUGAUCGGGACUCAAAUCCACCACCGAGACCUGUCCGUACCACUCAUACUGGUAAUCGAGUAGAUUGGCGCUCUAAUUGGAUGGAAGUAGGGGUGAAAACUCCUAUGGACCGAUUAGUGACGAAAAUCCUGGCCAUAGUAGCAGCGAUAGUCGGGUGAGAACCCCGACGGCCUAAUGGAUAAGGGUUCCUCAGCACUGCUGAUCAGCUGAGGGUUAGCCGGUCCUAAGUCAUACCGCAACUCGACUAUGACGAAAUGGGAAACGGGUUAAUAUUCCCGUGCCACUAUGCAGUGAAAGUUGACGCCCUGGGGUCGAUCACGCUGGGCAUCGCCCAGUCGAACCGUCCAACUCCGUGGAAGCCGUAAUGGCAGGAAGCGGACGAACGGCGGCAUAGGGAAACGUGAUUCAACCUGGGGCCCAUGAAAAGACGAGCAUAGUGUCCGUACCGAGAACCGACACAGGUGUCCAUGGCGGCGAAAGCCAAGGCCUGUCGGGAGCAACCAACGUUAGGGAAUUCGGCAAGUUAGUCCCGUACCUUCGGAAGAAGGGAUGCCUGCUCCGGAACGGAGCAGGUCGCAGUGACUCGGAAGCUCGGACUGUCUAGUAACAACAUAGGUGACCGCAAAUCCGCAAGGACUCGUACGGUCACUGAAUCCUGCCCAGUGCAGGUAUCUGAACACCUCGUACAAGAGGACGAAGGACCUGUCAACGGCGGGGGUCUUAAGGUAGCGUAGUACCUUGCCGCAUCAGUAGCGGCUUGCAUGAAUGGAUUAACCAGAGCUUCACUGUCCCAACGUUGGGCCCGGUGAACUGUACAUUCCAGUGCGGAGUCUGGAGACACCCAGGGGGAAGCGAAGACCCUAUGGAGCUUUACUGCAGGCUGUCGCUGAGGACUCUCACUCCGGGAGGAGGACACCGAUAGCCGGGCAGUUUGACUGGGGCGGUACGCGCUCGAAAAGAUAUCGAGCGCGCCCUAUGGCUAUCUCAGCCGGGGACCCGGCGAAGAGUGCAAGAGCAAAAGAUAGCUUGACAGUGUUCUUCCCAACGAGGAACGCUGACGCGAAAGCGUGGUCUAGCGAACCAAUUAGCCUGCUUGAUGCGGGCAAUUGAUGACAGAAAAGCUACCCUAGGGAUAACAGAGUCGUCACUCGCAAGAGCACAUAUCGACCGAGUGGCUUGCUACCUCGAUGUCGGUUCCCUCCAUCCUGCCCGUGCAGAAGCGGGCAAGGGUGAGGUugUUCGCCUAUUAAAGGAGGUCGUGAGCUGGGuUuAGACCGUCGUGAGACAGGUCGGCUGCUAUCUACUGGGUGUGUAGGUGUCUGACAAGAACGACCGUAUAGUACGAGAGGAACUACGGUUGGUGGCCACUGGUGUACCGGUUGUUCGAGAGAGCACGUGCCGGGUAGCCACGCCACACGGGGUAAGAGCUGAACGCAUCUAAGCUCGAAACCCACUUGGAAAAGAGACACCGCCGAGGUCCCGCGUACAAGACGCGGUCGAUAGACUCGGGGUGUGCGCGUCGAGGUAACGAGACGUUAAGCCCACGAGCACUAACAGACCAA 2914
                                    19        29        39        49        59        69        79        89        99       109       119     ||131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       601       611       621      |631       641       651       661       671       681       691       701       711  ||   722       732       742       752       762       772       782       792       802       812       822       832       842       852       862       872       882       892       902       912       922       932       942       952       962      1000      1010      1020      1030      1040      1050      1060      1070      1080      1090      1100      1110      1120      1130      1140      1150      1160      1170      1180      1190      1200      1210      1220      1230      1240      1250      1260      1270      1280      1290      1300      1310      1320      1330      1340      1350      1360      1370      1380      1390      1400      1410      1420      1430      1440      1450      1460      1470      1480      1490      1500      1510      1520      1530      1540      1550      1561      1571      1581      1591      1601      1611      1621      1631      1641      1651      1661      1671      1681      1691      1701      1711      1721      1731      1741      1751      1761      1771      1781      1791      1801      1811      1821      1831      1841      1851      1861      1871      1881      1891      1901      1911      1921      1931      1941      1951|     1973      1983      1993      2003      2013      2023      2033      2043      2053      2063      2073      2083      2093      2103      2113      2123      2133  ||  2243      2253      2263      2273      2283      2293      2303      2313      2323      2333    ||2348      2358      2368      2378      2388      2398      2408      2418      2428      2438      2448      2458      2468      2478      2488      2498      2508      2518      2528      2538      2548      2558      2568      2578      2588      2598      2608      2618| |   2628      2638      2648      2658     |2670      2680      2690      2700      2710      2720      2730      2740      2750      2760      2770      2780      2790      2800      2810      2820      2830      2840      2850      2860      2870      2880      2890      2900      2910    
                                                                                                                                             125|                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 628-1MA                                                                               714|                                                                                                                                                                                                                                                           970|                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            1559|                                                                                                                                                                                                                                                                                                                                                                                                  1951|                                                                                                                                                                        2136|                                                                                                 2338|                                                                                                                                                                                                                                               2587-OMU                        2619-UR3                                     2664|                                                                                                                                                                                                                                                       
                                                                                                                                              128                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        716                                                                                                                                                                                                                                                            999                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             1561                                                                                                                                                                                                                                                                                                                                                                                                   1964                                                                                                                                                                         2237                                                                                                  2344                                                                                                                                                                                                                                                2588-OMG                         2621-PSU                                    2667                                                                                                                                                                                                                                                       

Chain 1 from PDB  Type:PROTEIN  Length:56
 aligned with RL37_HALMA | P32410 from UniProtKB/Swiss-Prot  Length:57

    Alignment length:56
                                    11        21        31        41        51      
          RL37_HALMA      2 TGAGTPSQGKKNTTTHTKCRRCGEKSYHTKKKVCSSCGFGKSAKRRDYEWQSKAGE   57
               SCOP domains d1vqo11 1:1-56 Ribosomal protein L37e                    SCOP domains
               CATH domains 1vqo100 1:1-56  [code=2.20.25.30, no name defined]       CATH domains
               Pfam domains -Ribosomal_L37e-1vqo101 1:2-56                           Pfam domains
         Sec.struct. author ...hhhhhh......eee......eeee....ee.............hhhhh.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---RIBOSOMAL_L37E      --------------------------------- PROSITE
                 Transcript -------------------------------------------------------- Transcript
                1vqo 1    1 TGAGTPSQGKKNTTTHTKCRRCGEKSYHTKKKVCSSCGFGKSAKRRDYEWQSKAGE   56
                                    10        20        30        40        50      

Chain 2 from PDB  Type:PROTEIN  Length:46
 aligned with RL39_HALMA | P22452 from UniProtKB/Swiss-Prot  Length:50

    Alignment length:49
                                    11        21        31        41         
          RL39_HALMA      2 GKKSKATKKRLAKLDNQNSRVPAWVMLKTDREVQRNHKRRHWRRNDTDE   50
               SCOP domains d1vqo21 2:1-49 Ribosomal protei   n L39e          SCOP domains
               CATH domains 1vqo200 2:1-49                                    CATH domains
               Pfam domains ------Ribosomal_L39-1vqo201 2:7   -49             Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhh...hhhhhhhh..---............... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------RIBOSOMAL_L39E   ----- PROSITE
                 Transcript ------------------------------------------------- Transcript
                1vqo 2    1 GKKSKATKKRLAKLDNQNSRVPAWVMLKTDR---RNHKRRHWRRNDTDE   49
                                    10        20        30|   |   40         
                                                         31  35              

Chain 3 from PDB  Type:PROTEIN  Length:92
 aligned with RL44E_HALMA | P32411 from UniProtKB/Swiss-Prot  Length:92

    Alignment length:92
                                    10        20        30        40        50        60        70        80        90  
         RL44E_HALMA      1 MQMPRRFNTYCPHCNEHQEHEVEKVRSGRQTGMKWIDRQRERNSGIGNDGKFSKVPGGDKPTKKTDLKYRCGECGKAHLREGWRAGRLEFQE   92
               SCOP domains d1vqo31 3:1-92 Ribosomal protein L44e                                                        SCOP domains
               CATH domains 1vqo300 3:1-92  [code=3.10.450.80, no name defined]                                          CATH domains
               Pfam domains -------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eee.eeeeee....eeeeeeeee.........hhhhhhhhhhh....hhhhhh............eeeee.....ee..........eee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) -------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) -------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) -----------------------------------------------------------RIBOSOMAL_L4--------------------- PROSITE (4)
                 Transcript -------------------------------------------------------------------------------------------- Transcript
                1vqo 3    1 MQMPRRFNTYCPHCNEHQEHEVEKVRSGRQTGMKWIDRQRERNSGIGNDGKFSKVPGGDKPTKKTDLKYRCGECGKAHLREGWRAGRLEFQE   92
                                    10        20        30        40        50        60        70        80        90  

Chain 4 from PDB  Type:RNA  Length:3
                                    
                1vqo 4   74 CCa   76
                              |
                             76-PPU

Chain 9 from PDB  Type:RNA  Length:122
                                                                                                                                                           
                1vqo 9 3001 UUAGGCGGCCACAGCGGUGGGGUUGCCUCCCGUACCCAUCCCGAACACGGAAGAUAAGCCCACCAGCGUUCCGGGGAGUACUGGAGUGCGCGAGCCUCUGGGAAACCCGGUUCGCCGCCACC 3122
                                  3010      3020      3030      3040      3050      3060      3070      3080      3090      3100      3110      3120  

Chain A from PDB  Type:PROTEIN  Length:237
 aligned with RL2_HALMA | P20276 from UniProtKB/Swiss-Prot  Length:240

    Alignment length:237
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       
           RL2_HALMA      2 GRRIQGQRRGRGTSTFRAPSHRYKADLEHRKVEDGDVIAGTVVDIEHDPARSAPVAAVEFEDGDRRLILAPEGVGVGDELQVGVSAEIAPGNTLPLAEIPEGVPVCNVESSPGDGGKFARASGVNAQLLTHDRNVAVVKLPSGEMKRLDPQCRATIGVVAGGGRTDKPFVKAGNKHHKMKARGTKWPNVRGVAMNAVDHPFGGGGRQHPGKPKSISRNAPPGRKVGDIASKRTGRGG  238
               SCOP domains d1vqoa2 A:1-90 N-terminal domain of ribosomal protein L2                                  d1vqoa1 A:91-237 C-terminal domain of ribosomal protein L2                                                                                          SCOP domains
               CATH domains 1vqoA01 A:1-78 Nucleic acid-binding proteins                                  ---1vqoA02 A:82-159  [code=2.30.30.30, no name defined]                          1vqoA03 A:160-237 Ribosomal protein L2, domain 3                               CATH domains
               Pfam domains ---------Ribosomal_L2-1vqoA02 A:10-82                                             -----Ribosomal_L2_C-1vqoA01 A:88-221                                                                                                       ---------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhh.hhhhh...............eeeeeeeee......eeeeeee....eeee..........eee...........eee.hhh....eee...................eeeee.....eeee.....eeee....eeee......hhhhh...hhhhhhhhhh.........hhhhhhhhhh..............ee...........ee......... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RIBOSOMAL_L2--------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1vqo A    1 GRRIQGQRRGRGTSTFRAPSHRYKADLEHRKVEDGDVIAGTVVDIEHDPARSAPVAAVEFEDGDRRLILAPEGVGVGDELQVGVSAEIAPGNTLPLAEIPEGVPVCNVESSPGDGGKFARASGVNAQLLTHDRNVAVVKLPSGEMKRLDPQCRATIGVVAGGGRTDKPFVKAGNKHHKMKARGTKWPNVRGVAMNAVDHPFGGGGRQHPGKPKSISRNAPPGRKVGDIASKRTGRGG  237
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       

Chain B from PDB  Type:PROTEIN  Length:337
 aligned with RL3_HALMA | P20279 from UniProtKB/Swiss-Prot  Length:338

    Alignment length:337
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       
           RL3_HALMA      2 PQPSRPRKGSLGFGPRKRSTSETPRFNSWPSDDGQPGVQGFAGYKAGMTHVVLVNDEPNSPREGMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTLDVPEDHDPDAAEEQIRDAHEAGDLGDLRLITHTVPDAVPSVPKKKPDVMETRVGGGSVSDRLDHALDIVEDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPTVDGGFVNYGEVDGPYTLVKGSVPGPDKRLVRFRPAVRPNDQPRLDPEVRYVSNESNQG  338
               SCOP domains d1vqob1 B:1-337 Ribosomal protein L3                                                                                                                                                                                                                                                                                                              SCOP domains
               CATH domains 1vqoB01 B:1-38,B:207-257              1vqoB02 B:39-77,B:189-206,B:258-337    1vqoB03 B:78-188  [code=3.30.1430.10, no name defined]                                                         1vqoB02           1vqoB01 B:1-38,B:207-257                           1vqoB02 B:39-77,B:189-206,B:258-337 Translation factors                          CATH domains
               Pfam domains --------------------------------------------Ribosomal_L3-1vqoB01 B:45-312                                                                                                                                                                                                                                               ------------------------- Pfam domains
         Sec.struct. author ....................................ee..eeeeeeeeeeeeee...........eeeeeeeeee...eeeeeeeeeeee..eeeeeeeee......hhhhh.......hhhhhhhhhhhhhhhh.eeeeeeeee.hhhhh.........eeeeeee..hhhhhhhhhhhhhhhh.eehhhhh.....eeeeeee.....eehhhhhhh....hhhhhh.........................ee....eeeeeeeeeeeeeee................eeeeeee.........eeeeee.............eeee....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RIBOSOMAL_L3            ------------------------------------------------------------------------------------------------------------------------ PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1vqo B    1 PQPSRPRKGSLGFGPRKRSTSETPRFNSWPSDDGQPGVQGFAGYKAGMTHVVLVNDEPNSPREGMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTLDVPEDHDPDAAEEQIRDAHEAGDLGDLRLITHTVPDAVPSVPKKKPDVMETRVGGGSVSDRLDHALDIVEDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPTVDGGFVNYGEVDGPYTLVKGSVPGPDKRLVRFRPAVRPNDQPRLDPEVRYVSNESNQG  337
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       

Chain C from PDB  Type:PROTEIN  Length:246
 aligned with RL4_HALMA | P12735 from UniProtKB/Swiss-Prot  Length:246

    Alignment length:246
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240      
           RL4_HALMA      1 MQATIYDLDGNTDGEVDLPDVFETPVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAESFGSGRGQAHVPKQDGRARRVPQAVKGRSAHPPKTEKDRSLDLNDKERQLAVRSALAATADADLVADRGHEFDRDEVPVVVSDDFEDLVKTQEVVSLLEALDVHADIDRADETKIKAGQGSARGRKYRRPASILFVTSDEPSTAARNLAGADVATASEVNTEDLAPGGAPGRLTVFTESALAEVAER  246
               SCOP domains d1vqoc1 C:1-246 Ribosomal protein L4                                                                                                                                                                                                                   SCOP domains
               CATH domains 1vqoC00 C:1-246  [code=3.40.1370.10, no name defined]                                                                                                                                                                                                  CATH domains
               Pfam domains ---------------Ribosomal_L4-1vqoC01 C:16-246                                                                                                                                                                                                           Pfam domains
         Sec.struct. author .eeeee.....eeeeee.hhhhhh..hhhhhhhhhhhhhhhh.............................ee..ee.........................hhhhhhhhhhhhhhhh.hhhhhhhhh.........eee.hhhhhh.hhhhhhhhhhh...hhhhhhh...ee..hhhhhhh..ee.....eeee..............eeee....hhhhhhhhhh....eeeehhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------RIBOSOMAL_L1E              --------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                1vqo C    1 MQATIYDLDGNTDGEVDLPDVFETPVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAESFGSGRGQAHVPKLDGRARRVPQAVKGRSAHPPKTEKDRSLDLNDKERQLAVRSALAATADADLVADRGHEFDRDEVPVVVSDDFEDLVKTQEVVSLLEALDVHADIDRADETKIKAGQGSARGRKYRRPASILFVTSDEPSTAARNLAGADVATASEVNTEDLAPGGAPGRLTVFTESALAEVAER  246
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240      

Chain D from PDB  Type:PROTEIN  Length:140
 aligned with RL5_HALMA | P14124 from UniProtKB/Swiss-Prot  Length:177

    Alignment length:165
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170     
           RL5_HALMA     11 FHEMREPRIEKVVVHMGIGHGGRDLANAEDILGEITGQMPVRTKAKRTVGEFDIREGDPIGAKVTLRDEMAEEFLQTALPLAELATSQFDDTGNFSFGVEEHTEFPSQEYDPSIGIYGLDVTVNLVRPGYRVAKRDKASRSIPTKHRLNPADAVAFIESTYDVEV  175
               SCOP domains d1vqod1 D:10-174 Rib     osomal protein L5                                                                                                                            SCOP domains
               CATH domains 1vqoD00 D:10-174  [c     ode=3.30.1440.10, no name defined]                                                                                                           CATH domains
               Pfam domains -Ribosomal_L5-1vqoD0     1 D:11-64                     ---Ribosomal_L5_C-1vqoD02 D:68-166                                                                    -------- Pfam domains
         Sec.struct. author .......eeeeeeeeee...-----..hhhhhhhhhh...eeee..............eeeeeeee.hhhhhhhhhhhhhhh............eee.--------------------.eeeeeee..hhhhhh..............hhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) --------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) --------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) -------------------------------RIBOSOMAL_L5     --------------------------------------------------------------------------------------------------------------------- PROSITE (4)
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1vqo D   10 FHEMREPRIEKVVVHMGIGH-----ANAEDILGEITGQMPVRTKAKRTVGEFDIREGDPIGAKVTLRDEMAEEFLQTALPLAELATSQFDDTGNFSFG--------------------LDVTVNLVRPGYRVAKRDKASRSIPTKHRLNPADAVAFIESTYDVEV  174
                                    19        29     |  39        49        59        69        79        89        99       | -         -       129       139       149       159       169     
                                              29    35                                                                     107                  128                                              

Chain E from PDB  Type:PROTEIN  Length:172
 aligned with RL6_HALMA | P14135 from UniProtKB/Swiss-Prot  Length:178

    Alignment length:172
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171  
           RL6_HALMA      2 PRVELEIPEDVDAEQDHLDITVEGDNGSVTRRLWYPDIDVSVDGDTVVIESDEDNAKTMSTIGTFQSHIENMFHGVTEGWEYGMEVFYSHFPMQVNVEGDEVVIENFLGEKAPRRTTIHGDTDVEIDGEELTVSGPDIEAVGQTAADIEQLTRINDKDVRVFQDGVYITRKP  173
               SCOP domains d1vqoe1 E:1-79 Ribosomal protein L6                                            d1vqoe2 E:80-172 Ribosomal protein L6                                                         SCOP domains
               CATH domains 1vqoE01 E:1-79  [code=3.90.930.12, no name defined]                            1vqoE02 E:80-172  [code=3.90.930.12, no name defined]                                         CATH domains
           Pfam domains (1) ------------------------------------------------------------------------------------------Ribosomal_L6-1vqoE01 E:91-165                                              ------- Pfam domains (1)
           Pfam domains (2) ------------------------------------------------------------------------------------------Ribosomal_L6-1vqoE02 E:91-165                                              ------- Pfam domains (2)
         Sec.struct. author .eeeee.....eeeee..eeeeee..eeeeee......eeee...eeeee....hhhhhhhhhhhhhhhhhhhhhh...eeeeeeee......eeeee..eeeeehhhhh...eeee.....eeeee..eeeeee.hhhhhhhhhhhhhhh.............eeeeee.. Sec.struct. author
                 SAPs(SNPs) -S--------------------S----------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------RIBOSOMAL_L6_2        - PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1vqo E    1 PRVELEIPEDVDAEQDHLDITVEGDNGSVTRRLWYPDIDVSVDGDTVVIESDEDNAKTMSTIGTFQSHIENMFHGVTEGWEYGMEVFYSHFPMQVNVEGDEVVIENFLGEKAPRRTTIHGDTDVEIDGEELTVSGPDIEAVGQTAADIEQLTRINDKDVRVFQDGVYITRKP  172
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170  

Chain F from PDB  Type:PROTEIN  Length:119
 aligned with RL7A_HALMA | P12743 from UniProtKB/Swiss-Prot  Length:120

    Alignment length:119
                                    11        21        31        41        51        61        71        81        91       101       111         
          RL7A_HALMA      2 PVYVDFDVPADLEDDALEALEVARDTGAVKKGTNETTKSIERGSAELVFVAEDVQPEEIVMHIPELADEKGVPFIFVEQQDDLGHAAGLEVGSAAAAVTDAGEADADVEDIADKVEELR  120
               SCOP domains d1vqof1 F:1-119 Ribosomal protein L7ae                                                                                  SCOP domains
               CATH domains 1vqoF00 F:1-119  [code=3.30.1330.30, no name defined]                                                                   CATH domains
               Pfam domains -------------Ribosomal_L7Ae-1vqoF01 F:14-108                                                                ----------- Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhhhhhhh..eeehhhhhhhhhhhh....eeee....hhhhh.hhhhhhhh....eeee.hhhhhhhhh.......eeee.....hhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------RIBOSOMAL_L7AE    ----------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------- Transcript
                1vqo F    1 PVYVDFDVPADLEDDALEALEVARDTGAVKKGTNETTKSIERGSAELVFVAEDVQPEEIVMHIPELADEKGVPFIFVEQQDDLGHAAGLEVGSAAAAVTDAGEADADVEDIADKVEELR  119
                                    10        20        30        40        50        60        70        80        90       100       110         

Chain G from PDB  Type:PROTEIN  Length:29
 aligned with RL10_HALMA | P15825 from UniProtKB/Swiss-Prot  Length:348

    Alignment length:62
                                    21        31        41        51        61        71  
          RL10_HALMA     12 IPEWKQEEVDAIVEMIESYESVGVVNIAGIPSRQLQDMRRDLHGTAELRVSRNTLLERALDD   73
               SCOP domains d1vqog1 G:12-73                                                SCOP domains
               CATH domains -------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhh---------------------------------hhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------- Transcript
                1vqo G   12 IPEWKQEEVDAIVEMIES---------------------------------RNTLLERALDD   73
                                    21       | -         -         -         - |      71  
                                            29                                63          

Chain H from PDB  Type:PROTEIN  Length:160
 aligned with RL10E_HALMA | P60617 from UniProtKB/Swiss-Prot  Length:177

    Alignment length:171
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173 
         RL10E_HALMA      4 KPASMYRDIDKPAYTRREYITGIPGSKIAQHKMGRKQKDADDYPVQISLIVEETVQLRHGSLEASRLSANRHLIKELGEEGDYKMTLRKFPHQVLRENKQATGAGADRVSDGMRAAFGKIVGTAARVQAGEQLFTAYCNVEDAEHVKEAFRRAYNKITPSCRIKVERGEEL  174
               SCOP domains d1vqoh1 H:1-163 Ribosomal protein L10e                                                                                                                             -------- SCOP domains
               CATH domains 1vqoH00 H:1-171  [code=3.90.1170.10, no name defined]                                                                                                                       CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh.........................eee....hhhhh.eeeeeee...eeeehhhhhhhhhhhhhhhhhhhh.....eeee.....eeeee..-----------........eeeeeeeee....eeeeeee...hhhhhhhhhhhhhhhh...eeeee...... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ---------------------------------------------------------------------------------------------------------RIBOSOMAL_L10E        -------------------------------------------- PROSITE (3)
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1vqo H    1 KPASMYRDIDKPAYTRREYITGIPGSKIAQHKMGRKQKDADDYPVQISLIVEETVQLRHGSLEASRLSANRHLIKELGEEGDYKMTLRKFPHQVLRENK-----------DGMRAAFGKIVGTAARVQAGEQLFTAYCNVEDAEHVKEAFRRAYNKITPSCRIDSSPAGNA  171
                                    10        20        30        40        50        60        70        80        90        |-         -|      120       130       140       150       160       170 
                                                                                                                             99         111                                                            

Chain I from PDB  Type:PROTEIN  Length:70
 aligned with RL11_HALMA | P14122 from UniProtKB/Swiss-Prot  Length:162

    Alignment length:70
                                    76        86        96       106       116       126       136
          RL11_HALMA     67 GVPPTAELIKDEAGFETGSGEPQEDFVADLSVDQVKQIAEQKHPDLLSYDLTNAAKEVVGTCTSLGVTIE  136
               SCOP domains d1vqoi1 I:71-140 Ribosomal protein L11, C-terminal domain              SCOP domains
               CATH domains 1vqoI00 I:71-140  [code=1.10.10.250, no name defined]                  CATH domains
               Pfam domains Ribosomal_L11-1vqoI01 I:71-139                                       - Pfam domains
         Sec.struct. author ...hhhhhhhhhh..............eeeehhhhhhhhhhh.......hhhhhhhhhh.......eeee Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ---------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ---------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) -------------------------------------------------------RIBOSOMAL_L11   PROSITE (4)
                 Transcript ---------------------------------------------------------------------- Transcript
                1vqo I   71 GVPPTAELIKDEAGFETGSGEPQEDFVADLSVDQVKQIAEQKHPDLLSYDLTNAAKEVVGTCTSLGVTIE  140
                                    80        90       100       110       120       130       140

Chain J from PDB  Type:PROTEIN  Length:142
 aligned with RL13_HALMA | P29198 from UniProtKB/Swiss-Prot  Length:145

    Alignment length:142
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143  
          RL13_HALMA      4 AEFDADVIVDARDCIMGRVASQVAEQALDGETVAVVNAERAVITGREEQIVEKYEKRVDIGNDNGYFYPKRPDGIFKRTIRGMLPHKKQRGREAFESVRVYLGNPYDEDGEVLDGTSLDRLSNIKFVTLGEISETLGANKTW  145
               SCOP domains d1vqoj1 J:4-145 Ribosomal protein L13                                                                                                          SCOP domains
               CATH domains 1vqoJ00 J:4-145  [code=3.90.1180.10, no name defined]                                                                                          CATH domains
               Pfam domains -----Ribosomal_L13-1vqoJ01 J:9-117                                                                                ---------------------------- Pfam domains
         Sec.struct. author ......eeee....hhhhhhhhhhhhhhh...eeeehhhh.eee.hhhhhhhhhhhhhhh..........hhhhhhhhhhhh.....hhhhhhhhh.eee.........................eeehhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ---------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) -------------------------------------------------------------------------------RIBOSOMAL_L13           --------------------------------------- PROSITE (3)
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1vqo J    4 AEFDADVIVDARDCIMGRVASQVAEQALDGETVAVVNAERAVITGREEQIVEKYEKRVDIGNDNGYFYPKRPDGIFKRTIRGMLPHKKQRGREAFESVRVYLGNPYDEDGEVLDGTSLDRLSNIKFVTLGEISETLGANKTW  145
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143  

Chain K from PDB  Type:PROTEIN  Length:132
 aligned with RL14_HALMA | P22450 from UniProtKB/Swiss-Prot  Length:132

    Alignment length:132
                                    10        20        30        40        50        60        70        80        90       100       110       120       130  
          RL14_HALMA      1 MEALGADVTQGLEKGSLITCADNTGARELKVISVHGYSGTKNRHPKAGLGDKITVSVTKGTPEMRRQVLEAVVVRQRKPIRRPDGTRVKFEDNAAVIVDENEDPRGTELKGPIAREVAQRFGSVASAATMIV  132
               SCOP domains d1vqok1 K:1-132 Ribosomal protein L14                                                                                                SCOP domains
               CATH domains 1vqoK00 K:1-132 Ribosomal Protein L14;                                                                                               CATH domains
               Pfam domains ----------Ribosomal_L14-1vqoK01 K:11-132                                                                                             Pfam domains
         Sec.struct. author ......ee...ee...eeee.....eeeeeeeee...........ee....eeeeeeeee.......eeeeeeee....ee.....eeee...eeeee..............eehhhhhhhhhhhh....ee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------RIBOSOMAL_L14  PDB: K:71-97----------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------ Transcript
                1vqo K    1 MEALGADVTQGLEKGSLITCADNTGARELKVISVHGYSGTKNRLPKAGLGDKITVSVTKGTPEMRRQVLEAVVVRQRKPIRRPDGTRVKFEDNAAVIVDENEDPRGTELKGPIAREVAQRFGSVASAATMIV  132
                                    10        20        30        40        50        60        70        80        90       100       110       120       130  

Chain L from PDB  Type:PROTEIN  Length:145
 aligned with RL15_HALMA | P12737 from UniProtKB/Swiss-Prot  Length:165

    Alignment length:150
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151
          RL15_HALMA      2 TSKKKRQRGSRTHGGGSHKNRRGAGHRGGRGDAGRDKHEFHNHEPLGKSGFKRPQKVQEEAATIDVREIDENVTLLAADDVAEVEDGGFRVDVRDVVEEADDADYVKVLGAGQVRHELTLIADDFSEGAREKVEGAGGSVELTDLGEERQ  151
               SCOP domains d1vqol1 L:1-150 Ribosomal protein L15 (L15p)                                                                                                           SCOP domains
               CATH domains 1vqoL01 L:1-50                                    1vqoL02 L:51-149  [code=3.100.10.     10, no name defined]                                         - CATH domains
               Pfam domains ---------------Ribosomal_L18e-1vqoL01 L:16-143                                                                                                 ------- Pfam domains
         Sec.struct. author ..hhhhh...............hhhhhh.........................hhhhh..eeeeehhhhhhh...........-----.eee.hhh........eeeee.........eeee.eehhhhhhhhhhh..eeee........ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------------------------------------------RIBOSOMAL_L15  PDB: L:107-137  ------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                1vqo L    1 TSKKKRQRGSRTHGGGSHKNRRGAGHRGGRGDAGRDKHEFHNHEPLGKSGFKRPQKVQEEAATIDVREIDENVTLLAADDVAE-----FRVDVRDVVEEADDADYVKVLGAGQVRHELTLIADDFSEGAREKVEGAGGSVELTDLGEERQ  150
                                    10        20        30        40        50        60        70        80  |     90       100       110       120       130       140       150
                                                                                                             83    89                                                             

Chain M from PDB  Type:PROTEIN  Length:194
 aligned with RL15E_HALMA | P60618 from UniProtKB/Swiss-Prot  Length:196

    Alignment length:194
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191    
         RL15E_HALMA      2 ARSAYSYIRDAWKNPGDGQLAELQWQRQQEWRNEGAVERIERPTRLDKARSQGYKAKQGVIVARVSVRKGSARKRRHKAGRRSKRQGVTRITRRKDIQRVAEERASRTFPNLRVLNSYSVGQDGRQKWHEVILIDPNHPAIQNDDDLSWICADDQADRVFRGLTGAGRRNRGLSGKGKGSEKTRPSLRSNGGKG  195
               SCOP domains d1vqom1 M:1-194 Ribosomal protein L15e                                                                                                                                                             SCOP domains
               CATH domains 1vqoM00 M:1-194 Ribosomal protein l15e                                                                                                                                                             CATH domains
               Pfam domains --Ribosomal_L15e-1vqoM01 M:3-192                                                                                                                                                                -- Pfam domains
         Sec.struct. author ..hhhhhhhhhh....hhhhhhhhhhhhhhhh....eeee....hhhhhhhh.......eeeeeeeee.............hhhhh.........hhhhhhhhhhhhhh...eeeeeeeeee...eeeeeeeee...hhhhhh...hhhhhhhhhhhhhhhh.hhhhhhhh....................... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------RIBOSOMAL_L15E          ---------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1vqo M    1 ARSAYSYIRDAWENPGDGQLAELQWQRQQEWRNEGAVERIERPTRLDKARSQGYKAKQGVIVARVSVRKGSARKRRHKAGRRSKRQGVTRITRRKDIQRVAEERASRTFPNLRVLNSYSVGQDGRQKWHEVILIDPNHPAIQNDDDLSWICADDQADRVFRGLTGAGRRNRGLSGKGKGSEKTRPSLRSNGGKA  194
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190    

Chain N from PDB  Type:PROTEIN  Length:186
 aligned with RL18_HALMA | P14123 from UniProtKB/Swiss-Prot  Length:187

    Alignment length:186
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181      
          RL18_HALMA      2 ATGPRYKVPMRRRREARTDYHQRLRLLKSGKPRLVARKSNKHVRAQLVTLGPNGDDTLASAHSSDLAEYGWEAPTGNMPSAYLTGLLAGLRAQEAGVEEAVLDIGLNSPTPGSKVFAIQEGAIDAGLDIPHNDDVLADWQRTRGAHIAEYDEQLEEPLYSGDFDAADLPEHFDELRETLLDGDIEL  187
               SCOP domains d1vqon1 N:1-186 Ribosomal protein L18 (L18p)                                                                                                                                               SCOP domains
               CATH domains 1vqoN00 N:1-186  [code=3.30.420.100, no name defined]                                                                                                                                      CATH domains
               Pfam domains --------Ribosomal_L18p-1vqoN01 N:9-129                                                                                           --------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhh...hhhhhhhhhh....eeeeee....eeeeeee......eeeeeee.hhhhhhh......hhhhhhhhhhhhhhhhhhh.....eee.........hhhhhhhhhhhhh......hhhhh.hhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                1vqo N    1 ATGPRYKVPMRRRREARTDYHQRLRLLKSGKPRLVARKSNKHVRAQLVTLGPNGDDTLASAHSSDLAEYGWEAPTGNMPSAYLTGLLAGLRAQEAGVEEAVLDIGLNSPTPGSKVFAIQEGAIDAGLDIPHNDDVLADWQRTRGAHIAEYDEQLEEPLYSGDFDAADLPEHFDELRETLLDGDIEL  186
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180      

Chain O from PDB  Type:PROTEIN  Length:115
 aligned with RL18E_HALMA | P12733 from UniProtKB/Swiss-Prot  Length:116

    Alignment length:115
                                    11        21        31        41        51        61        71        81        91       101       111     
         RL18E_HALMA      2 SKTNPRLSSLIADLKSAARSSGGAVWGDVAERLEKPRRTHAEVNLGRIERYAQEDETVVVPGKVLGSGVLQKDVTVAAVDFSGTAETKIDQVGEAVSLEQAIENNPEGSHVRVIR  116
               SCOP domains d1vqoo1 O:1-115 Ribosomal protein L18e                                                                              SCOP domains
               CATH domains 1vqoO00 O:1-115  [code=3.100.10.10, no name defined]                                                                CATH domains
               Pfam domains ---------------------Ribosomal_L18e-1vqoO01 O:22-99                                                ---------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhheeeehhhhhhhh....eeeeeeeee.........eeeeeeehhhhhhhhhhhheeeehhhhhhhh.....eee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ------------------------------RIBOSOMAL_L18E    ------------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------- Transcript
                1vqo O    1 SKTNPRLSSLIADLKSAARSSGGAVWGDVAERLEKPRRTHAEVNLGRIERYAQEDETVVVPGKVLGSGVLQKDVTVAAVDFSGTAETKIDQVGEAVSLEQAIENNPEGSHVRVIR  115
                                    10        20        30        40        50        60        70        80        90       100       110     

Chain P from PDB  Type:PROTEIN  Length:143
 aligned with RL19E_HALMA | P14119 from UniProtKB/Swiss-Prot  Length:149

    Alignment length:143
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141   
         RL19E_HALMA      2 TDLSAQKRLAADVLDVGKNRVWFNPERQGDIADAITREDVRELVDEGAIQAKDKKGNSRGRARERQKKRAYGHQKGAGSRKGKAGARQNSKEDWESRIRAQRTKLRELRDEGTLSSSQYRDLYDKAGGGEFDSVADLERYIDA  144
               SCOP domains d1vqop1 P:1-143 Ribosomal protein L19 (L19e)                                                                                                    SCOP domains
               CATH domains 1vqoP01 P:1-55  [code=1.10.1650.10, no name defined]   1vqoP02 P:56-88 Single Heli x bin1vqoP03 P:89-143  [code=1.10.1200.60, no name defined]  CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhh..hhh.eee...hhhhhhh..hhhhhhhhhhh..eee.......hhhhhhhhhhhhh....hhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhh....hhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) -----RIBOSOMAL_L19E      ---------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1vqo P    1 TDLSAQKRLAADVLDVGKNRVWFNPERQGDIADAITREDVRELVDEGAIQAKDKKGNSRGRARERQKKRAYGHQKGAGSRKGKAGARQNSKEDWESRIRAQRTKLRELRDEGTLSSSQYRDLYDKAGGGEFDSVADLERYIDA  143
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140   

Chain Q from PDB  Type:PROTEIN  Length:95
 aligned with RL21_HALMA | P12734 from UniProtKB/Swiss-Prot  Length:96

    Alignment length:95
                                    11        21        31        41        51        61        71        81        91     
          RL21_HALMA      2 PSSNGPLEGTRGKLKNKPRDRGTSPPQRAVEEFDDGEKVHLKIDPSVPNGRFHPRFDGQTGTVEGKQGDAYKVDIVDGGKEKTIIVTAAHLRRQE   96
               SCOP domains d1vqoq1 Q:1-95 Ribosomal proteins L21e                                                          SCOP domains
               CATH domains 1vqoQ00 Q:1-95 Myosin S1 fragment SH3-like barrel                                               CATH domains
               Pfam domains Ribosomal_L21e-1vqoQ01 Q:1-95                                                                   Pfam domains
         Sec.struct. author ................hhhhh....hhhhhh......eeee...........hhhhh..eeeeeeee..eeeeeeee..eeeeeeehhh.eee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) -----------------------------------RIBOSOMAL_L21E            ---------------------------------- PROSITE (3)
                 Transcript ----------------------------------------------------------------------------------------------- Transcript
                1vqo Q    1 PSSNGPLEGTRGKLKNKPRDRGTSPPQRAVEEFDDGEKVHLKIDPSVPNGRFHPRFDGQTGTVEGKQGDAYKVDIVDGGKEKTIIVTAAHLRRQE   95
                                    10        20        30        40        50        60        70        80        90     

Chain R from PDB  Type:PROTEIN  Length:150
 aligned with RL22_HALMA | P10970 from UniProtKB/Swiss-Prot  Length:155

    Alignment length:150
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151
          RL22_HALMA      2 GISYSVEADPDTTAKAMLRERQMSFKHSKAIAREIKGKTAGEAVDYLEAVIEGDQPVPFKQHNSGVGHKSKVDGWDAGRYPEKASKAFLDLLENAVGNADHQGFDGEAMTIKHVAAHKVGEQQGRKPRAMGRASAWNSPQVDVELILEEP  151
               SCOP domains d1vqor1 R:1-150 Ribosomal protein L22                                                                                                                  SCOP domains
               CATH domains 1vqoR00 R:1-150 Ribosomal Protein L22; Chain A                                                                                                         CATH domains
               Pfam domains ---------------Ribosomal_L22-1vqoR01 R:16-149                                                                                                        - Pfam domains
         Sec.struct. author ............eeeeeeeee..hhhhhhhhhhhhh..hhhhhhhhhhhhhh....ee...................ee.hhhhhhhhhhhhhhhhhhhhhh..hhhhheeeeeeeeeeeee..eee.hhh.eee..eeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE (2)
                PROSITE (3) ------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE (3)
                PROSITE (4) ------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE (4)
                PROSITE (5) --------------------------------------------------------------------------------------------------------------------------RIBOSOMAL_L22            --- PROSITE (5)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                1vqo R    1 GISYSVEADPDTTAKAMLRERQMSFKHSKAIAREIKGKTAGEAVDYLEAVIEGDQPVPFKQHNSGVGHKSKVDGWDAGRYPEKASKAFLDLLENAVGNADHQGFDGEAMTIKHVAAHKVGEQQGRKPRAMGRASAWNSPQVDVELILEEP  150
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150

Chain S from PDB  Type:PROTEIN  Length:81
 aligned with RL23_HALMA | P12732 from UniProtKB/Swiss-Prot  Length:85

    Alignment length:81
                                    11        21        31        41        51        61        71        81 
          RL23_HALMA      2 SWDVIKHPHVTEKAMNDMDFQNKLQFAVDDRASKGEVADAVEEQYDVTVEQVNTQNTMDGEKKAVVRLSEDDDAQEVASRI   82
               SCOP domains d1vqos1 S:1-81 Ribosomal protein L23                                              SCOP domains
               CATH domains 1vqoS00 S:1-81  [code=3.30.70.330, no name defined]                               CATH domains
               Pfam domains -Ribosomal_L23-1vqoS01 S:2-81                                                     Pfam domains
         Sec.struct. author ....eeee..hhhhhhhhhhh.eeeeee....hhhhhhhhhhhhhh..eeeeeeee.....eeeeeee....hhhhhhh.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) --------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) --------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) --------------------------------------------------------------------------------- PROSITE (4)
                PROSITE (5) -------------------------------------------------------------RIBOSOMAL_L23   ---- PROSITE (5)
                 Transcript --------------------------------------------------------------------------------- Transcript
                1vqo S    1 SWDVIKHPHVTEKAMNDMDFQNKLQFAVDDRASKGEVADAVEEQYDVTVEQVNTQNTMDGEKKAVVRLSEDDDAQEVASRI   81
                                    10        20        30        40        50        60        70        80 

Chain T from PDB  Type:PROTEIN  Length:119
 aligned with RL24_HALMA | P10972 from UniProtKB/Swiss-Prot  Length:120

    Alignment length:119
                                    11        21        31        41        51        61        71        81        91       101       111         
          RL24_HALMA      2 SKQPDKQRKSQRRAPLHERHKQVRATLSADLREEYGQRNVRVNAGDTVEVLRGDFAGEEGEVINVDLDKAVIHVEDVTLEKTDGEEVPRPLDTSNVRVTDLDLEDEKREARLESEDDSA  120
               SCOP domains d1vqot1 T:1-119 Ribosomal proteins L24 (L24p)                                                                           SCOP domains
               CATH domains 1vqoT00 T:1-119  [code=2.30.30.30, no name defined]                                                                     CATH domains
               Pfam domains -------------------------------------------KOW-1vqoT01 T:44-75             -------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhh.hhhhhhhh.eeeehhhhhhhhh..eee.....eeee........eeeeeeee....eeee...eee.....eee...hhh.eeeee....hhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------RIBOSOMAL_L24     --------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------- Transcript
                1vqo T    1 SKQPDKQRKSQRRAPLHERHKQVRATLSADLREEYGQRNVRVNAGDTVEVLRGDFAGEEGEVINVDLDKAVIHVEDVTLEKTDGEEVPRPLDTSNVRVTDLDLEDEKREARLESEDDSA  119
                                    10        20        30        40        50        60        70        80        90       100       110         

Chain U from PDB  Type:PROTEIN  Length:53
 aligned with RL24E_HALMA | P14116 from UniProtKB/Swiss-Prot  Length:67

    Alignment length:53
                                    14        24        34        44        54   
         RL24E_HALMA      5 RECDYCGTDIEPGTGTMFVHKDGATTHFCSSKCENNADLGREARNLEWTDTAR   57
               SCOP domains d1vqou1 U:4-56 Ribosomal protein L24e                 SCOP domains
               CATH domains 1vqoU00 U:4-56  [code=2.30.170.20, no name defined]   CATH domains
               Pfam domains Ribosomal_L24e-1vqoU01 U:4-56                         Pfam domains
         Sec.struct. author ...............eeee.....eeee.hhhhhhhhhh..hhhhh....... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------- PROSITE (2)
                PROSITE (3) ----RIBOSOMAL_L24E    ------------------------------- PROSITE (3)
                 Transcript ----------------------------------------------------- Transcript
                1vqo U    4 RECDYCGTDIEPGTGTMFVHKDGATTHFCSSKCENNADLGREARNLEWTDTAR   56
                                    13        23        33        43        53   

Chain V from PDB  Type:PROTEIN  Length:65
 aligned with RL29_HALMA | P10971 from UniProtKB/Swiss-Prot  Length:71

    Alignment length:65
                                    11        21        31        41        51        61     
          RL29_HALMA      2 TVLHVQEIRDMTPAEREAELDDLKTELLNARAVQAAGGAPENPGRIKELRKAIARIKTIQGEEGD   66
               SCOP domains d1vqov1 V:1-65 Ribosomal protein L29 (L29p)                       SCOP domains
               CATH domains 1vqoV00 V:1-65  [code=1.10.287.310, no name defined]              CATH domains
               Pfam domains ----Ribosomal_L29-1vqoV01 V:5-63                               -- Pfam domains
         Sec.struct. author ...hhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ----------------------------------------------------------------- PROSITE (3)
                PROSITE (4) ----------------------------------------------------------------- PROSITE (4)
                PROSITE (5) -----------------------------------------RIBOSOMAL_L29  --------- PROSITE (5)
                 Transcript ----------------------------------------------------------------- Transcript
                1vqo V    1 TVLHVQEIRDMTPAEREAELDDLKTELLNARAVQAAGGAPENPGRIKELRKAIARIKTIQGEEGD   65
                                    10        20        30        40        50        60     

Chain W from PDB  Type:PROTEIN  Length:154
 aligned with RL30_HALMA | P14121 from UniProtKB/Swiss-Prot  Length:154

    Alignment length:154
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150    
          RL30_HALMA      1 MHALVQLRGEVNMHTDIQDTLEMLNIHHVNHCTLVPETDAYRGMVAKVNDFVAFGEPSQETLETVLATRAEPLEGDADVDDEWVAEHTDYDDISGLAFALLSEETTLREQGLSPTLRLHPPRGGHDGVKHPVKEGGQLGKHDTEGIDDLLEAMR  154
               SCOP domains d1vqow1 W:1-154 Archaeal L30 (L30a)                                                                                                                        SCOP domains
               CATH domains 1vqoW01 W:1-57,W:114-154                                 1vqoW02 W:58-113  [code=1.10.15.30, no name defined]    1vqoW01 W:1-57,W:114-154                  CATH domains
               Pfam domains Ribosomal_L30-1vqoW01 W:1-52                        ------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeee.......hhhhhhhhhhh......eeeee..hhhhhhhhhhh...eeee..hhhhhhhhhhhhh.........hhhhhhhhh...hhhhhhhhhhh............eee.............hhhhh...ee.hhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ---------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ---------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) -------------------RIBOSOMAL_L30  PDB: W:20-52      ------------------------------------------------------------------------------------------------------ PROSITE (4)
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1vqo W    1 MHALVQLRGEVNMHTDIQDTLEMLNIHHVNHCTLVPETDAYRGMVAKVNDFVAFGEPSQETLETVLATRAEPLEGDADVDDEWVAEHTDYDDISGLAFALLSEETTLREQGLSPTLRLHPPRGGHDGVKHPVKEGGQLGKHDTEGIDDLLEAMR  154
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150    

Chain X from PDB  Type:PROTEIN  Length:82
 aligned with RL31_HALMA | P18138 from UniProtKB/Swiss-Prot  Length:92

    Alignment length:82
                                    17        27        37        47        57        67        77        87  
          RL31_HALMA      8 ERVVTIPLRDARAEPNHKRADKAMILIREHLAKHFSVDEDAVRLDPSINEAAWARGRANTPSKIRVRAARFEEEGEAIVEAE   89
               SCOP domains d1vqox1 X:7-88 Ribosomal protein L31e                                              SCOP domains
               CATH domains 1vqoX00 X:7-88  [code=3.10.440.10, no name defined]                                CATH domains
               Pfam domains Ribosomal_L31e-1vqoX01 X:7-87                                                    - Pfam domains
         Sec.struct. author .eeeeee.hhhhhhhhhhhhhhhhhhhhhhhhhhh..hhh.eeehhhhhhhhh.........eeeeeeeee....eeeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ---------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) -----------------------------------------RIBOSOMAL_L31E -------------------------- PROSITE (3)
                 Transcript ---------------------------------------------------------------------------------- Transcript
                1vqo X    7 ERVVTIPLRDARAEPNHKRADKAMILIREHLAKHFSVDEDAVRLDPSINEAAWARGRANTPSKIRVRAARFEEEGEAIVEAE   88
                                    16        26        36        46        56        66        76        86  

Chain Y from PDB  Type:PROTEIN  Length:142
 aligned with RL32_HALMA | P12736 from UniProtKB/Swiss-Prot  Length:241

    Alignment length:142
                                   105       115       125       135       145       155       165       175       185       195       205       215       225       235  
          RL32_HALMA     96 TELQARGLTEKTPDLSDEDARLLTQRHRVGKPQFNRQDHHKKKRVSTSWRKPRGQLSKQRRGIKGKGDTVEAGFRSPTAVRGKHPSGFEEVRVHNVDDLEGVDGDTEAVRIASKVGARKRERIEEEAEDAGIRVLNPTYVEV  237
               SCOP domains d1vqoy1 Y:95-236 Ribosomal protein L32e                                                                                                        SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -----------------------------Ribosomal_L32e-1vqoY01 Y:124-231                                                                            ----- Pfam domains
         Sec.struct. author .eeee..........hhhhhhhhhhhhhhh.......hhhhh............................hhhhh.............eeeee.hhhhhh......eeeee....hhhhhhhhhhhhhhh........eeee Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ---------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ---------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) ---------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (4)
                PROSITE (5) ---------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (5)
                PROSITE (6) ---------------------------------RIBOSOMAL_L32E       ---------------------------------------------------------------------------------------- PROSITE (6)
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1vqo Y   95 TELQARGLTEKTPDLSDEDARLLTQRHRVGKPQFNRQDHHKKKRVSTSWRKPRGQLSKQRRGIKGKGDTVEAGFRSPTAVRGKHPSGFEEVRVHNVDDLEGVDGDTEAVRIASKVGARKRERIEEEAEDAGIRVLNPTYVEV  236
                                   104       114       124       134       144       154       164       174       184       194       204       214       224       234  

Chain Z from PDB  Type:PROTEIN  Length:73
 aligned with RL37A_HALMA | P60619 from UniProtKB/Swiss-Prot  Length:92

    Alignment length:73
                                    19        29        39        49        59        69        79   
         RL37A_HALMA     10 SSGRFGARYGRVSRRRVAEIESEMNEDHACPNCGEDRVDRQGTGIWQCSYCDYKFTGGSYKPETPGGKTVRRS   82
               SCOP domains d1vqoz1 Z:10-82 Ribosomal protein L37ae                                   SCOP domains
               CATH domains 1vqoZ00 Z:10-82  [code=2.20.25.30, no name defined]                       CATH domains
               Pfam domains -Ribosomal_L37ae-1vqoZ01 Z:11-82                                          Pfam domains
         Sec.struct. author hhhhhh...hhhhhhhhhhhhhhhhh...........eeeee..eeee.....eee.........hhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------- Transcript
                1vqo Z   10 RSGRFGARYGRVSRRRVAEIESEMNEDHACPNCGEDRVDRQGTGIWQCSYCDYKFTGGSYKPETPGGKTVRRS   82
                                    19        29        39        49        59        69        79   

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (30, 31)

Asymmetric/Biological Unit
(-)
Fold: RL5-like (90)
(-)
Class: Peptides (792)

(-) CATH Domains  (32, 36)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (26, 28)

Asymmetric/Biological Unit
(-)
Clan: KOW (56)
(-)
Clan: OB (224)
(-)
Clan: RRM (206)
(-)
Clan: Ribo_L29 (45)
(-)
Clan: S11_L18p (67)
(-)
Clan: TRASH (61)

(-) Gene Ontology  (23, 232)

Asymmetric/Biological Unit(hide GO term definitions)
Chain 1   (RL37_HALMA | P32410)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
    GO:0008270    zinc ion binding    Interacting selectively and non-covalently with zinc (Zn) ions.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain 2   (RL39_HALMA | P22452)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain 3   (RL44E_HALMA | P32411)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0070180    large ribosomal subunit rRNA binding    Interacting selectively and non-covalently with the large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
    GO:0000049    tRNA binding    Interacting selectively and non-covalently with transfer RNA.
    GO:0008270    zinc ion binding    Interacting selectively and non-covalently with zinc (Zn) ions.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain A   (RL2_HALMA | P20276)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0015934    large ribosomal subunit    The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site).
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain B   (RL3_HALMA | P20279)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain C   (RL4_HALMA | P12735)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain D   (RL5_HALMA | P14124)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
    GO:0000049    tRNA binding    Interacting selectively and non-covalently with transfer RNA.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain E   (RL6_HALMA | P14135)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain F   (RL7A_HALMA | P12743)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0004526    ribonuclease P activity    Catalysis of the endonucleolytic cleavage of RNA, removing 5' extra nucleotides from tRNA precursor.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0090501    RNA phosphodiester bond hydrolysis    The RNA metabolic process in which the phosphodiester bonds between ribonucleotides are cleaved by hydrolysis.
    GO:0090502    RNA phosphodiester bond hydrolysis, endonucleolytic    The chemical reactions and pathways involving the hydrolysis of internal 3',5'-phosphodiester bonds in one or two strands of ribonucleotides.
    GO:0042254    ribosome biogenesis    A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits; includes transport to the sites of protein synthesis.
    GO:0001682    tRNA 5'-leader removal    Generation of the mature 5'-end of the tRNA, usually via an endonucleolytic cleavage by RNase P.
    GO:0008033    tRNA processing    The process in which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group.
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain G   (RL10_HALMA | P15825)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0070180    large ribosomal subunit rRNA binding    Interacting selectively and non-covalently with the large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
biological process
    GO:0042254    ribosome biogenesis    A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits; includes transport to the sites of protein synthesis.
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain H   (RL10E_HALMA | P60617)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
    GO:0000049    tRNA binding    Interacting selectively and non-covalently with transfer RNA.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain I   (RL11_HALMA | P14122)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0070180    large ribosomal subunit rRNA binding    Interacting selectively and non-covalently with the large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain J   (RL13_HALMA | P29198)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0015934    large ribosomal subunit    The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site).
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain K   (RL14_HALMA | P22450)
molecular function