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(-) Description

Title :  HUMAN CLASS C G PROTEIN-COUPLED METABOTROPIC GLUTAMATE RECEPTOR 1 IN COMPLEX WITH A NEGATIVE ALLOSTERIC MODULATOR
 
Authors :  H. Wu, C. Wang, K. J. Gregory, G. W. Han, H. P. Cho, Y. Xia, C. M. Niswender, V. Katritch, V. Cherezov, P. J. Conn, R. C. Stevens, Gpcr Network (Gp
Date :  10 Feb 14  (Deposition) - 19 Mar 14  (Release) - 01 Apr 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.80
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Human Metabotropic Glutamate Receptor 1, Allosteric Modulator, Novel Protein Engineering, Gpcr Network, Membrane Protein, Psi-Biology, Structural Genomics, Gpcr, Membrane, Signaling Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  H. Wu, C. Wang, K. J. Gregory, G. W. Han, H. P. Cho, Y. Xia, C. M. Niswender V. Katritch, J. Meiler, V. Cherezov, P. J. Conn, R. C. Stevens
Structure Of A Class C Gpcr Metabotropic Glutamate Receptor 1 Bound To An Allosteric Modulator
Science V. 344 58 2014
PubMed-ID: 24603153  |  Reference-DOI: 10.1126/SCIENCE.1249489

(-) Compounds

Molecule 1 - SOLUBLE CYTOCHROME B562, METABOTROPIC GLUTAMATE RECEPTOR 1
    Chains: A, B
    Engineered: YES
    Expression System: SPODOPTERA FRUGIPERDA
    Expression System Plasmid: PFASTBAC
    Expression System Strain: SF9
    Expression System Taxid: 7108
    Expression System Vector Type: BACULOVIRUS
    Gene: CYBC, GRM1_HUMAN, GPRC1A, GRM1, MGLUR1
    Mutation: YES
    Organism Common: HUMAN
    Organism Scientific: ESCHERICHIA COLI, HOMO SAPIENS
    Organism Taxid: 562, 9606
    Other Details: CHIMERA PROTEIN OF SOLUBLE CYTOCHROME B562 FROM ESCHERICHIA COLI (P0ABE7) AND RESIDUES 581-860 FROM METABOTROPIC GLUTAMATE RECEPTOR 1 FROM HOMO SAPIENS (Q13255).
    Synonym: CYTOCHROME B-562, MGLUR1

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (5, 14)

Asymmetric/Biological Unit (5, 14)
No.NameCountTypeFull Name
1CLR6Ligand/IonCHOLESTEROL
2FM92Ligand/Ion4-FLUORO-N-METHYL-N-{4-[6-(PROPAN-2-YLAMINO)PYRIMIDIN-4-YL]-1,3-THIAZOL-2-YL}BENZAMIDE
3OLA1Ligand/IonOLEIC ACID
4OLC3Ligand/Ion(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-ENOATE
5PO42Ligand/IonPHOSPHATE ION

(-) Sites  (14, 14)

Asymmetric Unit (14, 14)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREVAL A:664 , SER A:668 , PRO A:756 , LEU A:757 , ASN A:760 , THR A:794 , ILE A:797 , TRP A:798 , PHE A:801 , TYR A:805 , LYS A:811 , THR A:815 , ALA A:818 , SER A:822BINDING SITE FOR RESIDUE FM9 A 1901
02AC2SOFTWAREILE A:597 , PHE A:646 , CLR A:1904 , TRP B:588 , PHE B:646BINDING SITE FOR RESIDUE CLR A 1902
03AC3SOFTWAREILE A:597 , ALA A:598 , LEU A:602 , PRO B:1056BINDING SITE FOR RESIDUE CLR A 1903
04AC4SOFTWARETRP A:588 , PHE A:639 , PHE A:646 , CLR A:1902 , CLR A:1905 , TRP B:588BINDING SITE FOR RESIDUE CLR A 1904
05AC5SOFTWAREALA A:650 , THR A:653 , CLR A:1904 , CLR B:1905BINDING SITE FOR RESIDUE CLR A 1905
06AC6SOFTWARETYR A:810 , PHE A:817 , SER B:702 , PO4 B:1903BINDING SITE FOR RESIDUE OLA A 1906
07AC7SOFTWAREGLY A:758 , PHE A:806BINDING SITE FOR RESIDUE OLC A 1907
08AC8SOFTWARESER A:589 , ILE A:591BINDING SITE FOR RESIDUE OLC A 1908
09AC9SOFTWARELEU B:648 , GLN B:660 , VAL B:664 , LEU B:757 , ASN B:760 , THR B:794 , ILE B:797 , TRP B:798 , PHE B:801 , TYR B:805 , LYS B:811 , ILE B:812 , THR B:815 , ALA B:818 , SER B:822BINDING SITE FOR RESIDUE FM9 B 1901
10BC1SOFTWAREASN B:809 , TYR B:810 , LYS B:811 , ILE B:812 , ILE B:813BINDING SITE FOR RESIDUE PO4 B 1902
11BC2SOFTWARETYR A:810 , OLA A:1906 , PRO B:698 , SER B:702BINDING SITE FOR RESIDUE PO4 B 1903
12BC3SOFTWARETYR A:836 , ASN B:750BINDING SITE FOR RESIDUE OLC B 1904
13BC4SOFTWARECLR A:1905 , TRP B:588 , ILE B:594 , ILE B:597 , ALA B:598BINDING SITE FOR RESIDUE CLR B 1905
14BC5SOFTWARETHR B:653 , THR B:655BINDING SITE FOR RESIDUE CLR B 1906

(-) SS Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1A:657 -A:746
2B:657 -B:746

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4OR2)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4OR2)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4OR2)

(-) Exons   (0, 0)

(no "Exon" information available for 4OR2)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:360
                                                                                                                                                                                                                                                                                                                                                                                                         
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhh..hhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..ee.....hhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhh...eeee......eeeee..hhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                4or2 A 1002 DLEDNWETLNDNLKVIEKADNAAQVKDALTKMRAAALDAQKATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLIPVRYLEWSNIESIIAIAFSCLGILVTLFVTLIFVLYRDTPVVKSSSRELCYIILAGIFLGYVCPFTLIAKPTTTSCYLQRLLVGLSSAMCYSALVTKTNRIARILARKPRFMSAWAQVIIASILISVQLTLVVTLIIMEPPMPILSYPSIKEVYLICNTSNLGVVAPLGYNGLLIMSCTYYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIITTCFAVSLSVTVALGCMFTPKMYIIIAKPE  843
                                  1011      1021      1031      1041      1051      1061      1071      1081      1091      1101    || 585       595       605       615       625       635       645       655       665       675       685 ||    703       713       723       733       743       753       763       773       783       793       803       813       823       833       843
                                                                                                                                 1106|                                                                                                       687|                                                                                                                                                   
                                                                                                                                   581                                                                                                        696                                                                                                                                                   


Chain B from PDB  Type:PROTEIN  Length:366
                                                                                                                                                                                                                                                                                                                                                                                                               
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhh..hhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhh...eeee.......eeee...hhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                4or2 B 1002 DLEDNWETLNDNLKVIEKADNAAQVKDALTKMRAAALDAQKATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLIPVRYLEWSNIESIIAIAFSCLGILVTLFVTLIFVLYRDTPVVKSSSRELCYIILAGIFLGYVCPFTLIAKPTTTSCYLQRLLVGLSSAMCYSALVTKTNRIARILAGCTRKPRFMSAWAQVIIASILISVQLTLVVTLIIMEPPMPILSYPSIKEVYLICNTSNLGVVAPLGYNGLLIMSCTYYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIITTCFAVSLSVTVALGCMFTPKMYIIIAKPERNV  846
                                  1011      1021      1031      1041      1051      1061      1071      1081      1091      1101    || 585       595       605       615       625       635       645       655       665       675       685  ||   700       710       720       730       740       750       760       770       780       790       800       810       820       830       840      
                                                                                                                                 1106|                                                                                                        688|                                                                                                                                                        
                                                                                                                                   581                                                                                                         694
   Legend:   → Mismatch (orange background)
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    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4OR2)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4OR2)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4OR2)

(-) Gene Ontology  (36, 36)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        C562_ECOLX | P0ABE7: 1apc 1lm3 1m6t 1qpu 1qq3 256b 2bc5 2qla 3c62 3c63 3de8 3de9 3foo 3fop 3hni 3hnj 3hnk 3hnl 3iq5 3iq6 3l1m 3m15 3m4b 3m4c 3m79 3nmi 3nmj 3nmk 3tol 3tom 3u8p 4ea3 4eiy 4iaq 4iar 4ib4 4je9 4jea 4jeb 4jkv 4l6r 4n6h 4nc3 4ntj 4o9r 4pxz 4py0 4qim 4qin 4rwa 4rwd 4u9d 4u9e 4yay 4z34 4z35 4z36 4zud 5awi 5bu7 5dhg 5dhh 5iu4 5iu7 5iu8 5iua 5iub 5jtb 5k2a 5k2b 5k2c 5k2d 5l31 5l32 5l7d 5l7i 5ndd 5ndz 5nj6 5tvn 5uen 5uig 5unf 5ung 5unh 5uvi
        GRM1_HUMAN | Q13255: 3ks9

(-) Related Entries Specified in the PDB File

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