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(-) Description

Title :  STRUCTURE OF THE CLASS B HUMAN GLUCAGON G PROTEIN COUPLED RECEPTOR
 
Authors :  F. Y. Siu, M. He, C. De Graaf, G. W. Han, D. Yang, Z. Zhang, C. Zhou, Q. Xu, D J. S. Joseph, W. Liu, J. Lau, V. Cherezov, V. Katritch, M. W. Wang, R. C. S Gpcr Network (Gpcr)
Date :  12 Jun 13  (Deposition) - 24 Jul 13  (Release) - 07 Aug 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.30
Chains :  Asym./Biol. Unit :  A
Keywords :  Human Glucagon Receptor, Diabetes, Gpcr Network, Psi-Biology, Membrane Protein, Novel Protein Engineering, Structural Genomics, Protein Structure Initiative, Gpcr, Membrane (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  F. Y. Siu, M. He, C. De Graaf, G. W. Han, D. Yang, Z. Zhang, C. Zhou, Q. Xu, D. Wacker, J. S. Joseph, W. Liu, J. Lau, V. Cherezov, V. Katritch, M. W. Wang, R. C. Stevens
Structure Of The Human Glucagon Class B G-Protein-Coupled Receptor.
Nature V. 499 444 2013
PubMed-ID: 23863937  |  Reference-DOI: 10.1038/NATURE12393

(-) Compounds

Molecule 1 - SOLUBLE CYTOCHROME B562 AND GLUCAGON RECEPTOR CHIMERA
    Chains: A
    Engineered: YES
    Expression System: SPODOPTERA FRUGIPERDA
    Expression System Common: FALL ARMYWORM
    Expression System Strain: SF9
    Expression System Taxid: 7108
    Expression System Vector: PFASTBAC
    Expression System Vector Type: BACULOVIRUS
    Fragment: UNP RESIDUES 23-128 AND 123-434
    Gene: CYBC, GCGR_HUMAN, GCGR
    Mutation: YES
    Organism Common: HUMAN
    Organism Scientific: ESCHERICHIA COLI, HOMO SAPIENS
    Organism Taxid: 562, 9606
    Synonym: CYTOCHROME B-562, GL-R

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1PEG1Ligand/IonDI(HYDROXYETHYL)ETHER

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREARG A:346 , SER A:350 , LEU A:399 , LEU A:403BINDING SITE FOR RESIDUE PEG A 1200

(-) SS Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1A:224 -A:294

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4L6R)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4L6R)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4L6R)

(-) Exons   (0, 0)

(no "Exon" information available for 4L6R)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:398
                                                                                                                                                                                                                                                                                                                                                                                                                                               
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhh...hhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhh.hhhhhhhhhhhhhhhhhhhh...hhhhhh...hhhhhhhhhhhhhhhhhhhhhhh.............hhhhhh..hhhhhhhhh.hhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhh...hhhhhhh...........hhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4l6r A 1001 ADLEDNWETLNDNLKVIEKADNAAQVKDALTKMRAAALDAQKATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLMDGEEIEVQKEVAKMYSSFQVMYTVGYSLSLGALLLALAILGGLSKLHCTRNAIHANLFASFVLKASSVLVIDGLLRTLSDGAVAGCRVAAVFMQYGIVANYCWLLVEGLYLHNLLGLATLPERSFFSLYLGIGWGAPMLFVVPWAVVKCLFENVQCWTSNDNMGFWWILRFPVFLAILINFFIFVRIVQLLVAKLRARQMHHTDYKFRLAKSTLTLIPLLGVHEVVFAFVTDEHAQGTLRSAKLFFDLFLSSFQGLLVAVLYCFLNKEVQSELRRRWHRWRLGKVLWEERN  429
                                  1010      1020      1030      1040      1050      1060      1070      1080      1090      1100     ||126       136       146       156       166       176       186       196   ||  221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421        
                                                                                                                                  1106|                                                                          200|                                                                                                                                                                                                                     
                                                                                                                                    123                                                                           216
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4L6R)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4L6R)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4L6R)

(-) Gene Ontology  (33, 33)

Asymmetric/Biological Unit(hide GO term definitions)

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  4l6r
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  C562_ECOLX | P0ABE7
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  GLR_HUMAN | P47871
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        C562_ECOLX | P0ABE7: 1apc 1lm3 1m6t 1qpu 1qq3 256b 2bc5 2qla 3c62 3c63 3de8 3de9 3foo 3fop 3hni 3hnj 3hnk 3hnl 3iq5 3iq6 3l1m 3m15 3m4b 3m4c 3m79 3nmi 3nmj 3nmk 3tol 3tom 3u8p 4ea3 4eiy 4iaq 4iar 4ib4 4je9 4jea 4jeb 4jkv 4n6h 4nc3 4ntj 4o9r 4or2 4pxz 4py0 4qim 4qin 4rwa 4rwd 4u9d 4u9e 4yay 4z34 4z35 4z36 4zud 5awi 5bu7 5dhg 5dhh 5iu4 5iu7 5iu8 5iua 5iub 5jtb 5k2a 5k2b 5k2c 5k2d 5l31 5l32 5l7d 5l7i 5ndd 5ndz 5nj6 5tvn 5uen 5uig 5unf 5ung 5unh 5uvi
        GLR_HUMAN | P47871: 2a83 3czf 4ers 4lf3 5ee7 5xez 5xf1

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 4L6R)