Chain A from PDB Type:PROTEIN Length:99
aligned with H32_XENLA | P84233 from UniProtKB/Swiss-Prot Length:136
Alignment length:99
47 57 67 77 87 97 107 117 127
H32_XENLA 38 KPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
SCOP domains d1p3fa_ A: Histone H3 SCOP domains
CATH domains 1p3fA00 A:437-535 Histone, subunit A CATH domains
Pfam domains --------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .......hhhhhhhhhhhhhh.....hhhhhhhhhhhhhh......eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -----------------------------HISTONE_H------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------- Transcript
1p3f A 437 KPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 535
446 456 466 476 486 496 506 516 526
Chain B from PDB Type:PROTEIN Length:80
aligned with H4_XENLA | P62799 from UniProtKB/Swiss-Prot Length:103
Alignment length:80
33 43 53 63 73 83 93 103
H4_XENLA 24 RDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
SCOP domains d1p3fb_ B: Histone H4 SCOP domains
CATH domains 1p3fB00 B:23-102 Histone, subunit A CATH domains
Pfam domains -------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhhhhhhhhhhhhh...ee..hhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhh.eee.... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------- Transcript
1p3f B 23 RDNIQGITKPAIRRLARRGGVKCISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 102
32 42 52 62 72 82 92 102
Chain C from PDB Type:PROTEIN Length:104
aligned with H2A1_XENLA | P06897 from UniProtKB/Swiss-Prot Length:130
Alignment length:104
25 35 45 55 65 75 85 95 105 115
H2A1_XENLA 16 KTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQSVLLPK 119
SCOP domains d1p3fc_ C: Histone H2A SCOP domains
CATH domains 1p3fC00 C:815-918 Histone, subunit A CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhh...hhhhhhhhhhhh....ee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhh...ee.........hhhhh.. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------HISTONE------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------- Transcript
1p3f C 815 KTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPK 918
824 834 844 854 864 874 884 894 904 914
Chain D from PDB Type:PROTEIN Length:91
aligned with H2B11_XENLA | P02281 from UniProtKB/Swiss-Prot Length:126
Alignment length:91
45 55 65 75 85 95 105 115 125
H2B11_XENLA 36 ESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 126
SCOP domains d1p3fd_ D: Histone H2B SCOP domains
CATH domains 1p3fD00 D:1232-1322 Histone, subunit A CATH domains
Pfam domains ------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------HISTONE_H2B ----------- PROSITE
Transcript ------------------------------------------------------------------------------------------- Transcript
1p3f D 1232 ESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 1322
1241 1251 1261 1271 1281 1291 1301 1311 1321
Chain E from PDB Type:PROTEIN Length:99
aligned with H32_XENLA | P84233 from UniProtKB/Swiss-Prot Length:136
Alignment length:99
47 57 67 77 87 97 107 117 127
H32_XENLA 38 KPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
SCOP domains d1p3fe_ E: Histone H3 SCOP domains
CATH domains 1p3fE00 E:637-735 Histone, subunit A CATH domains
Pfam domains (1) --------------------Histone-1p3fE01 E:657-731 ---- Pfam domains (1)
Pfam domains (2) --------------------Histone-1p3fE02 E:657-731 ---- Pfam domains (2)
Sec.struct. author .......hhhhhhhhhhhhhh.....hhhhhhhhhhhhhhh.....eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -----------------------------HISTONE_H------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------- Transcript
1p3f E 637 KPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 735
646 656 666 676 686 696 706 716 726
Chain F from PDB Type:PROTEIN Length:82
aligned with H4_XENLA | P62799 from UniProtKB/Swiss-Prot Length:103
Alignment length:82
31 41 51 61 71 81 91 101
H4_XENLA 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
SCOP domains d1p3ff_ F: Histone H4 SCOP domains
CATH domains 1p3fF00 F:221-302 Histone, subunit A CATH domains
Pfam domains (1) ---Histone-1p3fF01 F:224-293 --------- Pfam domains (1)
Pfam domains (2) ---Histone-1p3fF02 F:224-293 --------- Pfam domains (2)
Sec.struct. author ...hhhhhhhhhhhhhhhhhh...ee..hhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhh...ee.... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------- Transcript
1p3f F 221 VLRDNIQGITKPAIRRLARRGGVKCISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 302
230 240 250 260 270 280 290 300
Chain G from PDB Type:PROTEIN Length:107
aligned with H2A1_XENLA | P06897 from UniProtKB/Swiss-Prot Length:130
Alignment length:107
23 33 43 53 63 73 83 93 103 113
H2A1_XENLA 14 KAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQSVLLPKK 120
SCOP domains d1p3fg_ G: Histone H2A SCOP domains
CATH domains 1p3fG00 G:1013-1119 Histone, subunit A CATH domains
Pfam domains (1) ----Histone-1p3fG01 G:1017-1090 ----------------------------- Pfam domains (1)
Pfam domains (2) ----Histone-1p3fG02 G:1017-1090 ----------------------------- Pfam domains (2)
Sec.struct. author ...hhhhhh....hhhhhhhhhhhh....ee.hhhhhhhhhhhhhhhhhhhhhhhhhhhh....eehhhhhhhhhhhhhhhhhhh..eee.........hhhhh... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------HISTONE-------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------- Transcript
1p3f G 1013 KAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPKK 1119
1022 1032 1042 1052 1062 1072 1082 1092 1102 1112
Chain H from PDB Type:PROTEIN Length:95
aligned with H2B11_XENLA | P02281 from UniProtKB/Swiss-Prot Length:126
Alignment length:95
41 51 61 71 81 91 101 111 121
H2B11_XENLA 32 KSRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 126
SCOP domains d1p3fh_ H: Histone H2B SCOP domains
CATH domains 1p3fH00 H:1428-1522 Histone, subunit A CATH domains
Pfam domains (1) Histone-1p3fH01 H:1428-1498 ------------------------ Pfam domains (1)
Pfam domains (2) Histone-1p3fH02 H:1428-1498 ------------------------ Pfam domains (2)
Sec.struct. author ......hhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------HISTONE_H2B ----------- PROSITE
Transcript ----------------------------------------------------------------------------------------------- Transcript
1p3f H 1428 KSRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 1522
1437 1447 1457 1467 1477 1487 1497 1507 1517
Chain I from PDB Type:DNA Length:146
1p3f I 1 ATCAATATCCACCTGCAGATTCTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCGGAATTCCGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGAATCTGCAGGTGGATATTGAT 146
10 20 30 40 50 60 70 80 90 100 110 120 130 140
Chain J from PDB Type:DNA Length:146
1p3f J 147 ATCAATATCCACCTGCAGATTCTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCGGAATTCCGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGAATCTGCAGGTGGATATTGAT 292
156 166 176 186 196 206 216 226 236 246 256 266 276 286
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |