Chain A from PDB Type:PROTEIN Length:99
aligned with H32_XENLA | P84233 from UniProtKB/Swiss-Prot Length:136
Alignment length:99
47 57 67 77 87 97 107 117 127
H32_XENLA 38 KPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
SCOP domains d1p3ba_ A: Histone H3 SCOP domains
CATH domains 1p3bA00 A:437-535 Histone, subunit A CATH domains
Pfam domains --------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .......hhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhh.... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -----------------------------HISTONE_H------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------- Transcript
1p3b A 437 KPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 535
446 456 466 476 486 496 506 516 526
Chain B from PDB Type:PROTEIN Length:78
aligned with H4_XENLA | P62799 from UniProtKB/Swiss-Prot Length:103
Alignment length:78
35 45 55 65 75 85 95
H4_XENLA 26 NIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
SCOP domains d1p3bb_ B: Histone H4 SCOP domains
CATH domains 1p3bB00 B:25-102 Histone, subunit A CATH domains
Pfam domains ------------------------------------------------------------------------------ Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhh...ee..hhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhh..eee.... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------ Transcript
1p3b B 25 NIQGITKPAIRRLARRGGVKAISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 102
34 44 54 64 74 84 94
Chain C from PDB Type:PROTEIN Length:108
aligned with H2A1_XENLA | P06897 from UniProtKB/Swiss-Prot Length:130
Alignment length:108
23 33 43 53 63 73 83 93 103 113
H2A1_XENLA 14 KAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQSVLLPKKT 121
SCOP domains d1p3bc_ C: Histone H2A SCOP domains
CATH domains 1p3bC00 C:813-920 Histone, subunit A CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ...hhhhhhh...hhhhhhhhhhhh....ee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhh...ee.........hhhhh.... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE --------HISTONE--------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------ Transcript
1p3b C 813 KAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPKKT 920
822 832 842 852 862 872 882 892 902 912
Chain D from PDB Type:PROTEIN Length:94
aligned with H2B11_XENLA | P02281 from UniProtKB/Swiss-Prot Length:126
Alignment length:94
42 52 62 72 82 92 102 112 122
H2B11_XENLA 33 SRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 126
SCOP domains d1p3bd_ D: Histone H2B SCOP domains
CATH domains 1p3bD00 D:1229-1322 Histone, subunit A CATH domains
Pfam domains ---------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .....hhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------HISTONE_H2B ----------- PROSITE
Transcript ---------------------------------------------------------------------------------------------- Transcript
1p3b D 1229 SRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 1322
1238 1248 1258 1268 1278 1288 1298 1308 1318
Chain E from PDB Type:PROTEIN Length:99
aligned with H32_XENLA | P84233 from UniProtKB/Swiss-Prot Length:136
Alignment length:99
47 57 67 77 87 97 107 117 127
H32_XENLA 38 KPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
SCOP domains d1p3be_ E: Histone H3 SCOP domains
CATH domains 1p3bE00 E:637-735 Histone, subunit A CATH domains
Pfam domains (1) --------------------Histone-1p3bE01 E:657-731 ---- Pfam domains (1)
Pfam domains (2) --------------------Histone-1p3bE02 E:657-731 ---- Pfam domains (2)
Sec.struct. author .......hhhhhhhhhhhhhh.....hhhhhhhhhhhhhhh.....eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -----------------------------HISTONE_H------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------- Transcript
1p3b E 637 KPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 735
646 656 666 676 686 696 706 716 726
Chain F from PDB Type:PROTEIN Length:81
aligned with H4_XENLA | P62799 from UniProtKB/Swiss-Prot Length:103
Alignment length:81
32 42 52 62 72 82 92 102
H4_XENLA 23 LRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
SCOP domains d1p3bf_ F: Histone H4 SCOP domains
CATH domains 1p3bF00 F:222-302 Histone, subunit A CATH domains
Pfam domains (1) --Histone-1p3bF01 F:224-293 --------- Pfam domains (1)
Pfam domains (2) --Histone-1p3bF02 F:224-293 --------- Pfam domains (2)
Sec.struct. author ..hhhhhhhhhhhhhhhhhh...ee..hhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhh...ee.... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------- Transcript
1p3b F 222 LRDNIQGITKPAIRRLARRGGVKAISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 302
231 241 251 261 271 281 291 301
Chain G from PDB Type:PROTEIN Length:105
aligned with H2A1_XENLA | P06897 from UniProtKB/Swiss-Prot Length:130
Alignment length:105
25 35 45 55 65 75 85 95 105 115
H2A1_XENLA 16 KTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQSVLLPKK 120
SCOP domains d1p3bg_ G: Histone H2A SCOP domains
CATH domains 1p3bG00 G:1015-1119 Histone, subunit A CATH domains
Pfam domains (1) --Histone-1p3bG01 G:1017-1090 ----------------------------- Pfam domains (1)
Pfam domains (2) --Histone-1p3bG02 G:1017-1090 ----------------------------- Pfam domains (2)
Sec.struct. author .hhhhhhh...hhhhhhhhhhh.....ee..hhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhh..eee.........hhhhh... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------HISTONE-------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------- Transcript
1p3b G 1015 KTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPKK 1119
1024 1034 1044 1054 1064 1074 1084 1094 1104 1114
Chain H from PDB Type:PROTEIN Length:92
aligned with H2B11_XENLA | P02281 from UniProtKB/Swiss-Prot Length:126
Alignment length:92
44 54 64 74 84 94 104 114 124
H2B11_XENLA 35 KESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 126
SCOP domains d1p3bh_ H: Histone H2B SCOP domains
CATH domains 1p3bH00 H:1431-1522 Histone, subunit A CATH domains
Pfam domains (1) Histone-1p3bH01 H:1431-1498 ------------------------ Pfam domains (1)
Pfam domains (2) Histone-1p3bH02 H:1431-1498 ------------------------ Pfam domains (2)
Sec.struct. author ...hhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------HISTONE_H2B ----------- PROSITE
Transcript -------------------------------------------------------------------------------------------- Transcript
1p3b H 1431 KESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 1522
1440 1450 1460 1470 1480 1490 1500 1510 1520
Chain I from PDB Type:DNA Length:146
1p3b I 1 ATCAATATCCACCTGCAGATTCTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCGGAATTCCGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGAATCTGCAGGTGGATATTGAT 146
10 20 30 40 50 60 70 80 90 100 110 120 130 140
Chain J from PDB Type:DNA Length:146
1p3b J 147 ATCAATATCCACCTGCAGATTCTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCGGAATTCCGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGAATCTGCAGGTGGATATTGAT 292
156 166 176 186 196 206 216 226 236 246 256 266 276 286
Legend: |
|
→ Mismatch |
(orange background) |
|
- |
→ Gap |
(green background, '-', border residues have a numbering label) |
|
|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
|
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
|
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |