Chain A from PDB Type:PROTEIN Length:98
aligned with H32_XENLA | P84233 from UniProtKB/Swiss-Prot Length:136
Alignment length:98
48 58 68 78 88 98 108 118 128
H32_XENLA 39 PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
SCOP domains d1p3ga_ A: Histone H3 SCOP domains
CATH domains 1p3gA00 A:438-535 Histone, subunit A CATH domains
Pfam domains -------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhhhhhhhhhhhhh.....hhhhhhhhhhhhhhh.....eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhh.... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------HISTONE_H------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------- Transcript
1p3g A 438 PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 535
447 457 467 477 487 497 507 517 527
Chain B from PDB Type:PROTEIN Length:79
aligned with H4_XENLA | P62799 from UniProtKB/Swiss-Prot Length:103
Alignment length:79
34 44 54 64 74 84 94
H4_XENLA 25 DNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
SCOP domains d1p3gb_ B: Histone H4 SCOP domains
CATH domains 1p3gB00 B:24-102 Histone, subunit A CATH domains
Pfam domains ------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhhhhhhhhhhhh...ee..hhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhh...ee.... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------- Transcript
1p3g B 24 DNIQGITKPAIRRLARRGGVKEISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 102
33 43 53 63 73 83 93
Chain C from PDB Type:PROTEIN Length:104
aligned with H2A1_XENLA | P06897 from UniProtKB/Swiss-Prot Length:130
Alignment length:104
24 34 44 54 64 74 84 94 104 114
H2A1_XENLA 15 AKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQSVLLP 118
SCOP domains d1p3gc_ C: Histone H2A SCOP domains
CATH domains 1p3gC00 C:814-917 Histone, subunit A CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhh...hhhhhhhhhhhh....ee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhh..eee.........hhhhh. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------HISTONE------------------------------------------------------------------------------------------ PROSITE
Transcript -------------------------------------------------------------------------------------------------------- Transcript
1p3g C 814 AKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLP 917
823 833 843 853 863 873 883 893 903 913
Chain D from PDB Type:PROTEIN Length:93
aligned with H2B11_XENLA | P02281 from UniProtKB/Swiss-Prot Length:126
Alignment length:93
43 53 63 73 83 93 103 113 123
H2B11_XENLA 34 RKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 126
SCOP domains d1p3gd_ D: Histone H2B SCOP domains
CATH domains 1p3gD00 D:1230-1322 Histone, subunit A CATH domains
Pfam domains --------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....hhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -----------------------------------------------------------HISTONE_H2B ----------- PROSITE
Transcript --------------------------------------------------------------------------------------------- Transcript
1p3g D 1230 RKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 1322
1239 1249 1259 1269 1279 1289 1299 1309 1319
Chain E from PDB Type:PROTEIN Length:98
aligned with H32_XENLA | P84233 from UniProtKB/Swiss-Prot Length:136
Alignment length:98
48 58 68 78 88 98 108 118 128
H32_XENLA 39 PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
SCOP domains d1p3ge_ E: Histone H3 SCOP domains
CATH domains 1p3gE00 E:638-735 Histone, subunit A CATH domains
Pfam domains (1) -------------------Histone-1p3gE01 E:657-731 ---- Pfam domains (1)
Pfam domains (2) -------------------Histone-1p3gE02 E:657-731 ---- Pfam domains (2)
Sec.struct. author ......hhhhhhhhhhhhh......hhhhhhhhhhhhhhh.....eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------HISTONE_H------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------- Transcript
1p3g E 638 PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 735
647 657 667 677 687 697 707 717 727
Chain F from PDB Type:PROTEIN Length:87
aligned with H4_XENLA | P62799 from UniProtKB/Swiss-Prot Length:103
Alignment length:87
26 36 46 56 66 76 86 96
H4_XENLA 17 KRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
SCOP domains d1p3gf_ F: Histone H4 SCOP domains
CATH domains 1p3gF00 F:216-302 Histone, subunit A CATH domains
Pfam domains (1) --------Histone-1p3gF01 F:224-293 --------- Pfam domains (1)
Pfam domains (2) --------Histone-1p3gF02 F:224-293 --------- Pfam domains (2)
Sec.struct. author ........hhhhhhhhhhhhhhhhhh...ee..hhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhh..eee.... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------- Transcript
1p3g F 216 KRHRKVLRDNIQGITKPAIRRLARRGGVKEISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 302
225 235 245 255 265 275 285 295
Chain G from PDB Type:PROTEIN Length:108
aligned with H2A1_XENLA | P06897 from UniProtKB/Swiss-Prot Length:130
Alignment length:108
22 32 42 52 62 72 82 92 102 112
H2A1_XENLA 13 AKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQSVLLPKK 120
SCOP domains d1p3gg_ G: Histone H2A SCOP domains
CATH domains 1p3gG00 G:1012-1119 Histone, subunit A CATH domains
Pfam domains (1) -----Histone-1p3gG01 G:1017-1090 ----------------------------- Pfam domains (1)
Pfam domains (2) -----Histone-1p3gG02 G:1017-1090 ----------------------------- Pfam domains (2)
Sec.struct. author ....hhhhhh....hhhhhhhhhhh.....ee.hhhhhhhhhhhhhhhhhhhhhhhhhhhh....eehhhhhhhhhh.hhhhhhhh...ee.........hhhhh... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ---------HISTONE-------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------ Transcript
1p3g G 1012 AKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPKK 1119
1021 1031 1041 1051 1061 1071 1081 1091 1101 1111
Chain H from PDB Type:PROTEIN Length:92
aligned with H2B11_XENLA | P02281 from UniProtKB/Swiss-Prot Length:126
Alignment length:92
44 54 64 74 84 94 104 114 124
H2B11_XENLA 35 KESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 126
SCOP domains d1p3gh_ H: Histone H2B SCOP domains
CATH domains 1p3gH00 H:1431-1522 Histone, subunit A CATH domains
Pfam domains (1) Histone-1p3gH01 H:1431-1498 ------------------------ Pfam domains (1)
Pfam domains (2) Histone-1p3gH02 H:1431-1498 ------------------------ Pfam domains (2)
Sec.struct. author ...hhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------HISTONE_H2B ----------- PROSITE
Transcript -------------------------------------------------------------------------------------------- Transcript
1p3g H 1431 KESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 1522
1440 1450 1460 1470 1480 1490 1500 1510 1520
Chain I from PDB Type:DNA Length:146
1p3g I 1 ATCAATATCCACCTGCAGATTCTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCGGAATTCCGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGAATCTGCAGGTGGATATTGAT 146
10 20 30 40 50 60 70 80 90 100 110 120 130 140
Chain J from PDB Type:DNA Length:146
1p3g J 147 ATCAATATCCACCTGCAGATTCTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCGGAATTCCGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGAATCTGCAGGTGGATATTGAT 292
156 166 176 186 196 206 216 226 236 246 256 266 276 286
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |