Chain A from PDB Type:PROTEIN Length:97
aligned with H32_XENLA | P84233 from UniProtKB/Swiss-Prot Length:136
Alignment length:97
49 59 69 79 89 99 109 119 129
H32_XENLA 40 HRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
SCOP domains d1p3ka_ A: Histone H3 SCOP domains
CATH domains 1p3kA00 A:439-535 Histone, subunit A CATH domains
Pfam domains ------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .....hhhhhhhhhhhhhh.....hhhhhhhhhhhhhh......eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhh.... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------HISTONE_H------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------- Transcript
1p3k A 439 HRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVAIMPKDIQLARRIRGERA 535
448 458 468 478 488 498 508 518 528
Chain B from PDB Type:PROTEIN Length:79
aligned with H4_XENLA | P62799 from UniProtKB/Swiss-Prot Length:103
Alignment length:79
34 44 54 64 74 84 94
H4_XENLA 25 DNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
SCOP domains d1p3kb_ B: Histone H4 SCOP domains
CATH domains 1p3kB00 B:24-102 Histone, subunit A CATH domains
Pfam domains ------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhhhhhhhhhhh...ee..hhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhh...ee.... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------- Transcript
1p3k B 24 DNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 102
33 43 53 63 73 83 93
Chain C from PDB Type:PROTEIN Length:106
aligned with H2A1_XENLA | P06897 from UniProtKB/Swiss-Prot Length:130
Alignment length:106
25 35 45 55 65 75 85 95 105 115
H2A1_XENLA 16 KTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQSVLLPKKT 121
SCOP domains d1p3kc_ C: Histone H2A SCOP domains
CATH domains 1p3kC00 C:815-920 Histone, subunit A CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhh...hhhhhhhhhhhh....ee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhh..eee.........hhhhh.... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------HISTONE--------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------- Transcript
1p3k C 815 KTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPKKT 920
824 834 844 854 864 874 884 894 904 914
Chain D from PDB Type:PROTEIN Length:92
aligned with H2B11_XENLA | P02281 from UniProtKB/Swiss-Prot Length:126
Alignment length:92
44 54 64 74 84 94 104 114 124
H2B11_XENLA 35 KESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 126
SCOP domains d1p3kd_ D: Histone H2B SCOP domains
CATH domains 1p3kD00 D:1231-1322 Histone, subunit A CATH domains
Pfam domains -------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------HISTONE_H2B ----------- PROSITE
Transcript -------------------------------------------------------------------------------------------- Transcript
1p3k D 1231 KESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 1322
1240 1250 1260 1270 1280 1290 1300 1310 1320
Chain E from PDB Type:PROTEIN Length:99
aligned with H32_XENLA | P84233 from UniProtKB/Swiss-Prot Length:136
Alignment length:99
47 57 67 77 87 97 107 117 127
H32_XENLA 38 KPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
SCOP domains d1p3ke_ E: Histone H3 SCOP domains
CATH domains 1p3kE00 E:637-735 Histone, subunit A CATH domains
Pfam domains (1) --------------------Histone-1p3kE01 E:657-731 ---- Pfam domains (1)
Pfam domains (2) --------------------Histone-1p3kE02 E:657-731 ---- Pfam domains (2)
Sec.struct. author .......hhhhhhhhhhhh.......hhhhhhhhhhhhhhh.....eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhh.... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -----------------------------HISTONE_H------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------- Transcript
1p3k E 637 KPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVAIMPKDIQLARRIRGERA 735
646 656 666 676 686 696 706 716 726
Chain F from PDB Type:PROTEIN Length:81
aligned with H4_XENLA | P62799 from UniProtKB/Swiss-Prot Length:103
Alignment length:81
32 42 52 62 72 82 92 102
H4_XENLA 23 LRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
SCOP domains d1p3kf_ F: Histone H4 SCOP domains
CATH domains 1p3kF00 F:222-302 Histone, subunit A CATH domains
Pfam domains (1) --Histone-1p3kF01 F:224-293 --------- Pfam domains (1)
Pfam domains (2) --Histone-1p3kF02 F:224-293 --------- Pfam domains (2)
Sec.struct. author ..hhhhhhhhhhhhhhhhhh...ee..hhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhh..eee.... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------- Transcript
1p3k F 222 LRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 302
231 241 251 261 271 281 291 301
Chain G from PDB Type:PROTEIN Length:106
aligned with H2A1_XENLA | P06897 from UniProtKB/Swiss-Prot Length:130
Alignment length:106
24 34 44 54 64 74 84 94 104 114
H2A1_XENLA 15 AKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQSVLLPKK 120
SCOP domains d1p3kg_ G: Histone H2A SCOP domains
CATH domains 1p3kG00 G:1014-1119 Histone, subunit A CATH domains
Pfam domains (1) ---Histone-1p3kG01 G:1017-1090 ----------------------------- Pfam domains (1)
Pfam domains (2) ---Histone-1p3kG02 G:1017-1090 ----------------------------- Pfam domains (2)
Sec.struct. author ..hhhhhhh...hhhhhhhhhhhh....ee..hhhhhhhhhhhhhhhhhhhhhhhhhhh....eehhhhhhhhhhhhhhhhhhh...ee.........hhhhh... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------HISTONE-------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------- Transcript
1p3k G 1014 AKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPKK 1119
1023 1033 1043 1053 1063 1073 1083 1093 1103 1113
Chain H from PDB Type:PROTEIN Length:94
aligned with H2B11_XENLA | P02281 from UniProtKB/Swiss-Prot Length:126
Alignment length:94
42 52 62 72 82 92 102 112 122
H2B11_XENLA 33 SRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 126
SCOP domains d1p3kh_ H: Histone H2B SCOP domains
CATH domains 1p3kH00 H:1429-1522 Histone, subunit A CATH domains
Pfam domains (1) Histone-1p3kH01 H:1429-1498 ------------------------ Pfam domains (1)
Pfam domains (2) Histone-1p3kH02 H:1429-1498 ------------------------ Pfam domains (2)
Sec.struct. author .....hhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------HISTONE_H2B ----------- PROSITE
Transcript ---------------------------------------------------------------------------------------------- Transcript
1p3k H 1429 SRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 1522
1438 1448 1458 1468 1478 1488 1498 1508 1518
Chain I from PDB Type:DNA Length:146
1p3k I 1 ATCAATATCCACCTGCAGATTCTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCGGAATTCCGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGAATCTGCAGGTGGATATTGAT 146
10 20 30 40 50 60 70 80 90 100 110 120 130 140
Chain J from PDB Type:DNA Length:146
1p3k J 147 ATCAATATCCACCTGCAGATTCTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCGGAATTCCGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGAATCTGCAGGTGGATATTGAT 292
156 166 176 186 196 206 216 226 236 246 256 266 276 286
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |