Chain A from PDB Type:PROTEIN Length:98
aligned with H3C_XENLA | P02302 from UniProtKB/Swiss-Prot Length:136
Alignment length:98
48 58 68 78 88 98 108 118 128
H3C_XENLA 39 PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQRSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
SCOP domains d1aoia_ A: Histone H3 SCOP domains
CATH domains 1aoiA00 A:38-135 Histone, subunit A CATH domains
Pfam domains -------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .......hhhhhhhhhhhh.......hhhhhhhhhhhhhhh....ee.hhhhhhhhhhhhhhhhhhhhhhhhhhhh....ee.hhhhhhhhhhh.... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------HISTONE_H------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------- Transcript
1aoi A 38 PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
47 57 67 77 87 97 107 117 127
Chain B from PDB Type:PROTEIN Length:83
aligned with H4_XENLA | P62799 from UniProtKB/Swiss-Prot Length:103
Alignment length:83
30 40 50 60 70 80 90 100
H4_XENLA 21 KVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
SCOP domains d1aoib_ B: Histone H4 SCOP domains
CATH domains 1aoiB00 B:20-102 Histone, subunit A CATH domains
Pfam domains ----------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhh..hhhhhhhhhh....ee.hhhhhhhhhhhhhhhhhhhhhhhhhhhh....ee.hhhhhhhhhhh...ee.... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------- Transcript
1aoi B 20 KVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 102
29 39 49 59 69 79 89 99
Chain C from PDB Type:PROTEIN Length:115
aligned with H2A1_XENLA | P06897 from UniProtKB/Swiss-Prot Length:130
Alignment length:115
14 24 34 44 54 64 74 84 94 104 114
H2A1_XENLA 5 GKQGGKTRAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQSVLLPK 119
SCOP domains d1aoic_ C: Histone H2A SCOP domains
CATH domains 1aoiC00 C:4-118 Histone, subunit A CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhh.........hhhhh.....hhhhhhhhh......ee.hhhhhhhhhhhhhhhhhhhhhhhhhhhh....ee.hhhhhhhhh..hhhhhh....ee..........hhh... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -----------------HISTONE------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------- Transcript
1aoi C 4 GKQGGKTRAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPK 118
13 23 33 43 53 63 73 83 93 103 113
Chain D from PDB Type:PROTEIN Length:99
aligned with H2B11_XENLA | P02281 from UniProtKB/Swiss-Prot Length:126
Alignment length:99
37 47 57 67 77 87 97 107 117
H2B11_XENLA 28 KKRRKSRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 126
SCOP domains d1aoid_ D: Histone H2B SCOP domains
CATH domains 1aoiD00 D:24-122 Histone, subunit A CATH domains
Pfam domains --------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...........hhhhhhhhhhh....ee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...ee.hhhhhhhhhhh..hhhhhhhhhhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -----------------------------------------------------------------HISTONE_H2B ----------- PROSITE
Transcript --------------------------------------------------------------------------------------------------- Transcript
1aoi D 24 KKRRKTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 122
33 43 53 63 73 83 93 103 113
Chain E from PDB Type:PROTEIN Length:116
aligned with H3C_XENLA | P02302 from UniProtKB/Swiss-Prot Length:136
Alignment length:116
30 40 50 60 70 80 90 100 110 120 130
H3C_XENLA 21 LVTKAAKKCAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQRSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
SCOP domains d1aoie_ E: Histone H3 SCOP domains
CATH domains 1aoiE00 E:20-135 Histone, subunit A CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .........................hhhhhhhhhhhh.......hhhhhhhhhhhhhh.....ee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...ee.hhhhhhhhhhh.... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------HISTONE_H------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------- Transcript
1aoi E 20 LATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
29 39 49 59 69 79 89 99 109 119 129
Chain F from PDB Type:PROTEIN Length:87
aligned with H4_XENLA | P62799 from UniProtKB/Swiss-Prot Length:103
Alignment length:87
26 36 46 56 66 76 86 96
H4_XENLA 17 KRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
SCOP domains d1aoif_ F: Histone H4 SCOP domains
CATH domains 1aoiF00 F:16-102 Histone, subunit A CATH domains
Pfam domains --------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .........hhhh..hhhhhhhhhh....ee...hhhhhhhhhhhhhhhhhhhhhhhhhhh...ee.hhhhhhhhhh....ee.... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------- Transcript
1aoi F 16 KRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 102
25 35 45 55 65 75 85 95
Chain G from PDB Type:PROTEIN Length:108
aligned with H2A1_XENLA | P06897 from UniProtKB/Swiss-Prot Length:130
Alignment length:108
22 32 42 52 62 72 82 92 102 112
H2A1_XENLA 13 AKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQSVLLPKK 120
SCOP domains d1aoig_ G: Histone H2A SCOP domains
CATH domains 1aoiG00 G:12-119 Histone, subunit A CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author .....hhhhh.....hhhhhhhhhhh....ee...hhhhhhhhhhhhhhhhhhhhhhhhhhh...ee.hhhhhhhhh..hhhhhh....ee..........hhh.... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ---------HISTONE-------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------ Transcript
1aoi G 12 AKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPKK 119
21 31 41 51 61 71 81 91 101 111
Chain H from PDB Type:PROTEIN Length:99
aligned with H2B11_XENLA | P02281 from UniProtKB/Swiss-Prot Length:126
Alignment length:99
37 47 57 67 77 87 97 107 117
H2B11_XENLA 28 KKRRKSRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 126
SCOP domains d1aoih_ H: Histone H2B SCOP domains
CATH domains 1aoiH00 H:24-122 Histone, subunit A CATH domains
Pfam domains --------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..........hhhhhhhhhhhh....ee.hhhhhhhhhhhhhhhhhhhhhhhhhhhh....ee.hhhhhhhhhhh..hhhhhhhhhhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -----------------------------------------------------------------HISTONE_H2B ----------- PROSITE
Transcript --------------------------------------------------------------------------------------------------- Transcript
1aoi H 24 KKRRKTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 122
33 43 53 63 73 83 93 103 113
Chain I from PDB Type:DNA Length:146
1aoi I 1 ATCAATATCCACCTGCAGATTCTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCTGAATTCAGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGAATCTGCAGGTGGATATTGAT 146
10 20 30 40 50 60 70 80 90 100 110 120 130 140
Chain J from PDB Type:DNA Length:146
1aoi J 147 ATCAATATCCACCTGCAGATTCTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCTGAATTCAGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGAATCTGCAGGTGGATATTGAT 292
156 166 176 186 196 206 216 226 236 246 256 266 276 286
Legend: |
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→ Mismatch |
(orange background) |
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→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |