Chain A from PDB Type:PROTEIN Length:97
aligned with H32_XENLA | P84233 from UniProtKB/Swiss-Prot Length:136
Alignment length:97
48 58 68 78 88 98 108 118 128
H32_XENLA 39 PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 135
SCOP domains d3lz0a_ A: Histone H3 SCOP domains
CATH domains ------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhhhhhhhhhhhhh.....hhhhhhhhhhhhhhh.....eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------HISTONE_H------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------- Transcript
3lz0 A 38 PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 134
47 57 67 77 87 97 107 117 127
Chain B from PDB Type:PROTEIN Length:83
aligned with H4_XENLA | P62799 from UniProtKB/Swiss-Prot Length:103
Alignment length:83
30 40 50 60 70 80 90 100
H4_XENLA 21 KVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
SCOP domains ----------------------------------------------------------------------------------- SCOP domains
CATH domains ----------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....hhhhhhhhhhhhhhhhhh...ee..hhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhh..eee.... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------- Transcript
3lz0 B 20 KVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 102
29 39 49 59 69 79 89 99
Chain C from PDB Type:PROTEIN Length:103
aligned with Q6AZJ8_XENLA | Q6AZJ8 from UniProtKB/TrEMBL Length:130
Alignment length:103
26 36 46 56 66 76 86 96 106 116
Q6AZJ8_XENLA 17 TRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPK 119
SCOP domains d3lz0c_ C: Histone H2A SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhh...hhhhhhhhhhhh....ee..hhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhh...ee.........hhhhh.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------- Transcript
3lz0 C 16 TRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPK 118
25 35 45 55 65 75 85 95 105 115
Chain D from PDB Type:PROTEIN Length:95
aligned with H2B11_XENLA | P02281 from UniProtKB/Swiss-Prot Length:126
Alignment length:95
41 51 61 71 81 91 101 111 121
H2B11_XENLA 32 KSRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 126
SCOP domains ----------------------------------------------------------------------------------------------- SCOP domains
CATH domains ----------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------HISTONE_H2B ----------- PROSITE
Transcript ----------------------------------------------------------------------------------------------- Transcript
3lz0 D 28 KTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 122
37 47 57 67 77 87 97 107 117
Chain E from PDB Type:PROTEIN Length:97
aligned with H32_XENLA | P84233 from UniProtKB/Swiss-Prot Length:136
Alignment length:97
49 59 69 79 89 99 109 119 129
H32_XENLA 40 HRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
SCOP domains d3lz0e_ E: Histone H3 SCOP domains
CATH domains ------------------------------------------------------------------------------------------------- CATH domains
Pfam domains (1) ------------------Histone-3lz0E01 E:57-131 ---- Pfam domains (1)
Pfam domains (2) ------------------Histone-3lz0E02 E:57-131 ---- Pfam domains (2)
Sec.struct. author .....hhhhhhhhhhhhh......hhhhhhhhhhhhhhh.....eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------HISTONE_H------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------- Transcript
3lz0 E 39 HRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
48 58 68 78 88 98 108 118 128
Chain F from PDB Type:PROTEIN Length:78
aligned with H4_XENLA | P62799 from UniProtKB/Swiss-Prot Length:103
Alignment length:78
35 45 55 65 75 85 95
H4_XENLA 26 NIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
SCOP domains ------------------------------------------------------------------------------ SCOP domains
CATH domains ------------------------------------------------------------------------------ CATH domains
Pfam domains (1) Histone-3lz0F01 F:25-93 --------- Pfam domains (1)
Pfam domains (2) Histone-3lz0F02 F:25-93 --------- Pfam domains (2)
Sec.struct. author hhhhhhhhhhhhhhhhh...ee..hhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhh...ee.... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------ Transcript
3lz0 F 25 NIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 102
34 44 54 64 74 84 94
Chain G from PDB Type:PROTEIN Length:105
aligned with Q6AZJ8_XENLA | Q6AZJ8 from UniProtKB/TrEMBL Length:130
Alignment length:105
24 34 44 54 64 74 84 94 104 114
Q6AZJ8_XENLA 15 AKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPK 119
SCOP domains d3lz0g_ G: Histone H2A SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains (1) ---Histone-3lz0G01 G:17-90 ---------------------------- Pfam domains (1)
Pfam domains (2) ---Histone-3lz0G02 G:17-90 ---------------------------- Pfam domains (2)
Sec.struct. author ..hhhhhh....hhhhhhhhhhh.....ee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhh.hhhhhh..eee.........hhhhh.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------- Transcript
3lz0 G 14 AKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPK 118
23 33 43 53 63 73 83 93 103 113
Chain H from PDB Type:PROTEIN Length:93
aligned with H2B11_XENLA | P02281 from UniProtKB/Swiss-Prot Length:126
Alignment length:93
42 52 62 72 82 92 102 112 122
H2B11_XENLA 33 SRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSA 125
SCOP domains --------------------------------------------------------------------------------------------- SCOP domains
CATH domains --------------------------------------------------------------------------------------------- CATH domains
Pfam domains (1) Histone-3lz0H01 H:29-98 ----------------------- Pfam domains (1)
Pfam domains (2) Histone-3lz0H02 H:29-98 ----------------------- Pfam domains (2)
Sec.struct. author .....hhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------HISTONE_H2B ---------- PROSITE
Transcript --------------------------------------------------------------------------------------------- Transcript
3lz0 H 29 TRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSA 121
38 48 58 68 78 88 98 108 118
Chain I from PDB Type:DNA Length:145
3lz0 I -72 ATCAGAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCACCGCTTAAACGCACGTACGCGCTGTCCCCCGCGTTTTAACCGCCAAGGGGATTACTCCCTAGTCTCCAGGCACGTGTCAGATATATACATCGAT 72
-63 -53 -43 -33 -23 -13 -3 7 17 27 37 47 57 67
Chain J from PDB Type:DNA Length:145
3lz0 J -72 ATCGATGTATATATCTGACACGTGCCTGGAGACTAGGGAGTAATCCCCTTGGCGGTTAAAACGCGGGGGACAGCGCGTACGTGCGTTTAAGCGGTGCTAGAGCTGTCTACGACCAATTGAGCGGCCTCGGCACCGGGATTCTGAT 72
-63 -53 -43 -33 -23 -13 -3 7 17 27 37 47 57 67
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |