Chain A from PDB Type:PROTEIN Length:96
aligned with H32_XENLA | P84233 from UniProtKB/Swiss-Prot Length:136
Alignment length:96
48 58 68 78 88 98 108 118 128
H32_XENLA 39 PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 134
SCOP domains d3kuya_ A: Histone H3 SCOP domains
CATH domains 3kuyA00 A:38-133 Histone, subunit A CATH domains
Pfam domains ------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ......hhhhhhhhhhhhhh.....hhhhhhhhhhhhhhh.....eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ----------------------------HISTONE_H----------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------ Transcript
3kuy A 38 PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 133
47 57 67 77 87 97 107 117 127
Chain B from PDB Type:PROTEIN Length:82
aligned with H4_XENLA | P62799 from UniProtKB/Swiss-Prot Length:103
Alignment length:82
31 41 51 61 71 81 91 101
H4_XENLA 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
SCOP domains d3kuyb_ B: Histone H4 SCOP domains
CATH domains 3kuyB00 B:21-102 Histone, subunit A CATH domains
Pfam domains ---------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....hhhhhhhhhhhhhhhhh...ee..hhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhh..eee.... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------- Transcript
3kuy B 21 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 102
30 40 50 60 70 80 90 100
Chain C from PDB Type:PROTEIN Length:106
aligned with H2A1_XENLA | P06897 from UniProtKB/Swiss-Prot Length:130
Alignment length:106
24 34 44 54 64 74 84 94 104 114
H2A1_XENLA 15 AKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQSVLLPKK 120
SCOP domains d3kuyc_ C: Histone H2A SCOP domains
CATH domains 3kuyC00 C:14-119 Histone, subunit A CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhh....hhhhhhhhhhhh....ee.hhhhhhhhhhhhhhhhhhhhhhhhhhhh....eehhhhhhhhhhhhhhhhhhh..eee.........hhhhh... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------HISTONE-------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------- Transcript
3kuy C 14 AKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPKK 119
23 33 43 53 63 73 83 93 103 113
Chain C from PDB Type:PROTEIN Length:106
aligned with Q6AZJ8_XENLA | Q6AZJ8 from UniProtKB/TrEMBL Length:130
Alignment length:106
24 34 44 54 64 74 84 94 104 114
Q6AZJ8_XENLA 15 AKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPKK 120
SCOP domains d3kuyc_ C: Histone H2A SCOP domains
CATH domains 3kuyC00 C:14-119 Histone, subunit A CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhh....hhhhhhhhhhhh....ee.hhhhhhhhhhhhhhhhhhhhhhhhhhhh....eehhhhhhhhhhhhhhhhhhh..eee.........hhhhh... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------- Transcript
3kuy C 14 AKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPKK 119
23 33 43 53 63 73 83 93 103 113
Chain D from PDB Type:PROTEIN Length:95
aligned with H2B11_XENLA | P02281 from UniProtKB/Swiss-Prot Length:126
Alignment length:95
41 51 61 71 81 91 101 111 121
H2B11_XENLA 32 KSRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 126
SCOP domains d3kuyd_ D: Histone H2B SCOP domains
CATH domains 3kuyD00 D:28-122 Histone, subunit A CATH domains
Pfam domains ----------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------HISTONE_H2B ----------- PROSITE
Transcript ----------------------------------------------------------------------------------------------- Transcript
3kuy D 28 KTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 122
37 47 57 67 77 87 97 107 117
Chain D from PDB Type:PROTEIN Length:95
aligned with Q92130_XENLA | Q92130 from UniProtKB/TrEMBL Length:126
Alignment length:95
41 51 61 71 81 91 101 111 121
Q92130_XENLA 32 KSRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 126
SCOP domains d3kuyd_ D: Histone H2B SCOP domains
CATH domains 3kuyD00 D:28-122 Histone, subunit A CATH domains
Pfam domains ----------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------- Transcript
3kuy D 28 KTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 122
37 47 57 67 77 87 97 107 117
Chain E from PDB Type:PROTEIN Length:96
aligned with H32_XENLA | P84233 from UniProtKB/Swiss-Prot Length:136
Alignment length:96
48 58 68 78 88 98 108 118 128
H32_XENLA 39 PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 134
SCOP domains d3kuye_ E: Histone H3 SCOP domains
CATH domains 3kuyE00 E:38-133 Histone, subunit A CATH domains
Pfam domains (1) -------------------Histone-3kuyE01 E:57-131 -- Pfam domains (1)
Pfam domains (2) -------------------Histone-3kuyE02 E:57-131 -- Pfam domains (2)
Sec.struct. author ......hhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ----------------------------HISTONE_H----------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------ Transcript
3kuy E 38 PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 133
47 57 67 77 87 97 107 117 127
Chain F from PDB Type:PROTEIN Length:87
aligned with H4_XENLA | P62799 from UniProtKB/Swiss-Prot Length:103
Alignment length:87
26 36 46 56 66 76 86 96
H4_XENLA 17 KRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
SCOP domains d3kuyf_ F: Histone H4 SCOP domains
CATH domains 3kuyF00 F:16-102 Histone, subunit A CATH domains
Pfam domains (1) --------Histone-3kuyF01 F:24-93 --------- Pfam domains (1)
Pfam domains (2) --------Histone-3kuyF02 F:24-93 --------- Pfam domains (2)
Sec.struct. author ........hhhhhhhhhhhhhhhhhh...ee..hhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhh..eee.... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------- Transcript
3kuy F 16 KRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 102
25 35 45 55 65 75 85 95
Chain G from PDB Type:PROTEIN Length:106
aligned with H2A1_XENLA | P06897 from UniProtKB/Swiss-Prot Length:130
Alignment length:106
24 34 44 54 64 74 84 94 104 114
H2A1_XENLA 15 AKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQSVLLPKK 120
SCOP domains d3kuyg_ G: Histone H2A SCOP domains
CATH domains 3kuyG00 G:14-119 Histone, subunit A CATH domains
Pfam domains (1) ---Histone-3kuyG01 G:17-90 ----------------------------- Pfam domains (1)
Pfam domains (2) ---Histone-3kuyG02 G:17-90 ----------------------------- Pfam domains (2)
Sec.struct. author ..hhhhhh....hhhhhhhhhhh.....ee..hhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhh..eee.........hhhhh... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------HISTONE-------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------- Transcript
3kuy G 14 AKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPKK 119
23 33 43 53 63 73 83 93 103 113
Chain G from PDB Type:PROTEIN Length:106
aligned with Q6AZJ8_XENLA | Q6AZJ8 from UniProtKB/TrEMBL Length:130
Alignment length:106
24 34 44 54 64 74 84 94 104 114
Q6AZJ8_XENLA 15 AKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPKK 120
SCOP domains d3kuyg_ G: Histone H2A SCOP domains
CATH domains 3kuyG00 G:14-119 Histone, subunit A CATH domains
Pfam domains (1) ---Histone-3kuyG01 G:17-90 ----------------------------- Pfam domains (1)
Pfam domains (2) ---Histone-3kuyG02 G:17-90 ----------------------------- Pfam domains (2)
Sec.struct. author ..hhhhhh....hhhhhhhhhhh.....ee..hhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhh..eee.........hhhhh... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------- Transcript
3kuy G 14 AKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPKK 119
23 33 43 53 63 73 83 93 103 113
Chain H from PDB Type:PROTEIN Length:95
aligned with H2B11_XENLA | P02281 from UniProtKB/Swiss-Prot Length:126
Alignment length:95
41 51 61 71 81 91 101 111 121
H2B11_XENLA 32 KSRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 126
SCOP domains d3kuyh_ H: Histone H2B SCOP domains
CATH domains 3kuyH00 H:28-122 Histone, subunit A CATH domains
Pfam domains (1) Histone-3kuyH01 H:28-98 ------------------------ Pfam domains (1)
Pfam domains (2) Histone-3kuyH02 H:28-98 ------------------------ Pfam domains (2)
Sec.struct. author ......hhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------HISTONE_H2B ----------- PROSITE
Transcript ----------------------------------------------------------------------------------------------- Transcript
3kuy H 28 KTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 122
37 47 57 67 77 87 97 107 117
Chain H from PDB Type:PROTEIN Length:95
aligned with Q92130_XENLA | Q92130 from UniProtKB/TrEMBL Length:126
Alignment length:95
41 51 61 71 81 91 101 111 121
Q92130_XENLA 32 KSRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 126
SCOP domains d3kuyh_ H: Histone H2B SCOP domains
CATH domains 3kuyH00 H:28-122 Histone, subunit A CATH domains
Pfam domains (1) Histone-3kuyH01 H:28-98 ------------------------ Pfam domains (1)
Pfam domains (2) Histone-3kuyH02 H:28-98 ------------------------ Pfam domains (2)
Sec.struct. author ......hhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------- Transcript
3kuy H 28 KTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 122
37 47 57 67 77 87 97 107 117
Chain I from PDB Type:DNA Length:145
3kuy I -72 ATCAATATCCACCTGCAGATACTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCTGAATCAGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGTATCTGCAGGTGGATATTGAT 72
-63 -53 -43 -33 -23 -13 -3 7 17 27 37 47 57 67
Chain J from PDB Type:DNA Length:145
3kuy J -72 ATCAATATCCACCTGCAGATACTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCTGATTCAGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGTATCTGCAGGTGGATATTGAT 72
-63 -53 -43 -33 -23 -13 -3 7 17 27 37 47 57 67
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |