Chain A from PDB Type:PROTEIN Length:98
aligned with H32_XENLA | P84233 from UniProtKB/Swiss-Prot Length:136
Alignment length:98
48 58 68 78 88 98 108 118 128
H32_XENLA 39 PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
SCOP domains d1p3la_ A: Histone H3 SCOP domains
CATH domains 1p3lA00 A:438-535 Histone, subunit A CATH domains
Pfam domains -------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhhhhhhhhhhhhh.....hhhhhhhhhhhhhhh.....eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhh.... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------HISTONE_H------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------- Transcript
1p3l A 438 PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVHIMPKDIQLARRIRGERA 535
447 457 467 477 487 497 507 517 527
Chain B from PDB Type:PROTEIN Length:79
aligned with H4_XENLA | P62799 from UniProtKB/Swiss-Prot Length:103
Alignment length:79
34 44 54 64 74 84 94
H4_XENLA 25 DNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
SCOP domains d1p3lb_ B: Histone H4 SCOP domains
CATH domains 1p3lB00 B:24-102 Histone, subunit A CATH domains
Pfam domains ------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhhhhhhhhhhhh...ee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eehhhhhhhhhhhh..eee.... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------- Transcript
1p3l B 24 DNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 102
33 43 53 63 73 83 93
Chain C from PDB Type:PROTEIN Length:106
aligned with H2A1_XENLA | P06897 from UniProtKB/Swiss-Prot Length:130
Alignment length:106
25 35 45 55 65 75 85 95 105 115
H2A1_XENLA 16 KTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQSVLLPKKT 121
SCOP domains d1p3lc_ C: Histone H2A SCOP domains
CATH domains 1p3lC00 C:815-920 Histone, subunit A CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhh...hhhhhhhhhhhh....ee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhh..eee.........hhhhh.... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------HISTONE--------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------- Transcript
1p3l C 815 KTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPKKT 920
824 834 844 854 864 874 884 894 904 914
Chain D from PDB Type:PROTEIN Length:92
aligned with H2B11_XENLA | P02281 from UniProtKB/Swiss-Prot Length:126
Alignment length:92
44 54 64 74 84 94 104 114 124
H2B11_XENLA 35 KESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 126
SCOP domains d1p3ld_ D: Histone H2B SCOP domains
CATH domains 1p3lD00 D:1231-1322 Histone, subunit A CATH domains
Pfam domains -------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------HISTONE_H2B ----------- PROSITE
Transcript -------------------------------------------------------------------------------------------- Transcript
1p3l D 1231 KESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 1322
1240 1250 1260 1270 1280 1290 1300 1310 1320
Chain E from PDB Type:PROTEIN Length:99
aligned with H32_XENLA | P84233 from UniProtKB/Swiss-Prot Length:136
Alignment length:99
47 57 67 77 87 97 107 117 127
H32_XENLA 38 KPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
SCOP domains d1p3le_ E: Histone H3 SCOP domains
CATH domains 1p3lE00 E:637-735 Histone, subunit A CATH domains
Pfam domains (1) --------------------Histone-1p3lE01 E:657-731 ---- Pfam domains (1)
Pfam domains (2) --------------------Histone-1p3lE02 E:657-731 ---- Pfam domains (2)
Sec.struct. author .......hhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhh.... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -----------------------------HISTONE_H------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------- Transcript
1p3l E 637 KPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVHIMPKDIQLARRIRGERA 735
646 656 666 676 686 696 706 716 726
Chain F from PDB Type:PROTEIN Length:83
aligned with H4_XENLA | P62799 from UniProtKB/Swiss-Prot Length:103
Alignment length:83
30 40 50 60 70 80 90 100
H4_XENLA 21 KVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
SCOP domains d1p3lf_ F: Histone H4 SCOP domains
CATH domains 1p3lF00 F:220-302 Histone, subunit A CATH domains
Pfam domains (1) ----Histone-1p3lF01 F:224-293 --------- Pfam domains (1)
Pfam domains (2) ----Histone-1p3lF02 F:224-293 --------- Pfam domains (2)
Sec.struct. author ....hhhhhhhhhhhhhhhhhh...ee..hhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhh..eee.... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------- Transcript
1p3l F 220 KVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 302
229 239 249 259 269 279 289 299
Chain G from PDB Type:PROTEIN Length:109
aligned with H2A1_XENLA | P06897 from UniProtKB/Swiss-Prot Length:130
Alignment length:109
21 31 41 51 61 71 81 91 101 111
H2A1_XENLA 12 RAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQSVLLPKK 120
SCOP domains d1p3lg_ G: Histone H2A SCOP domains
CATH domains 1p3lG00 G:1011-1119 Histone, subunit A CATH domains
Pfam domains (1) ------Histone-1p3lG01 G:1017-1090 ----------------------------- Pfam domains (1)
Pfam domains (2) ------Histone-1p3lG02 G:1017-1090 ----------------------------- Pfam domains (2)
Sec.struct. author .....hhhhhhh...hhhhhhhhhhh.....ee.hhhhhhhhhhhhhhhhhhhhhhhhhhhh....eehhhhhhhhhhhhhhhhhhh..eee.........hhhhh... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------HISTONE-------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------- Transcript
1p3l G 1011 RAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPKK 1119
1020 1030 1040 1050 1060 1070 1080 1090 1100 1110
Chain H from PDB Type:PROTEIN Length:95
aligned with H2B11_XENLA | P02281 from UniProtKB/Swiss-Prot Length:126
Alignment length:95
41 51 61 71 81 91 101 111 121
H2B11_XENLA 32 KSRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 126
SCOP domains d1p3lh_ H: Histone H2B SCOP domains
CATH domains 1p3lH00 H:1428-1522 Histone, subunit A CATH domains
Pfam domains (1) Histone-1p3lH01 H:1428-1498 ------------------------ Pfam domains (1)
Pfam domains (2) Histone-1p3lH02 H:1428-1498 ------------------------ Pfam domains (2)
Sec.struct. author ......hhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------HISTONE_H2B ----------- PROSITE
Transcript ----------------------------------------------------------------------------------------------- Transcript
1p3l H 1428 KSRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 1522
1437 1447 1457 1467 1477 1487 1497 1507 1517
Chain I from PDB Type:DNA Length:146
1p3l I 1 ATCAATATCCACCTGCAGATTCTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCGGAATTCCGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGAATCTGCAGGTGGATATTGAT 146
10 20 30 40 50 60 70 80 90 100 110 120 130 140
Chain J from PDB Type:DNA Length:146
1p3l J 147 ATCAATATCCACCTGCAGATTCTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCGGAATTCCGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGAATCTGCAGGTGGATATTGAT 292
156 166 176 186 196 206 216 226 236 246 256 266 276 286
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |