Chain A from PDB Type:PROTEIN Length:98
aligned with H32_XENLA | P84233 from UniProtKB/Swiss-Prot Length:136
Alignment length:98
48 58 68 78 88 98 108 118 128
H32_XENLA 39 PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
SCOP domains -------------------------------------------------------------------------------------------------- SCOP domains
CATH domains -------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ........hhhhhhhhhhhh.....hhhhhhhhhhhhhhh.....eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------HISTONE_H------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------- Transcript
3o62 A 38 PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
47 57 67 77 87 97 107 117 127
Chain B from PDB Type:PROTEIN Length:80
aligned with H4_XENLA | P62799 from UniProtKB/Swiss-Prot Length:103
Alignment length:80
33 43 53 63 73 83 93 103
H4_XENLA 24 RDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
SCOP domains -------------------------------------------------------------------------------- SCOP domains
CATH domains -------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .......hhhhhhhhhhh....ee..hhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhh..ee.... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------- Transcript
3o62 B 23 RDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 102
32 42 52 62 72 82 92 102
Chain C from PDB Type:PROTEIN Length:105
aligned with H2A1_XENLA | P06897 from UniProtKB/Swiss-Prot Length:130
Alignment length:105
24 34 44 54 64 74 84 94 104 114
H2A1_XENLA 15 AKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQSVLLPK 119
SCOP domains --------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ............hhhhhhhhh...........hhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhh...ee................ Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------HISTONE------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------- Transcript
3o62 C 14 AKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPK 118
23 33 43 53 63 73 83 93 103 113
Chain D from PDB Type:PROTEIN Length:95
aligned with H2B11_XENLA | P02281 from UniProtKB/Swiss-Prot Length:126
Alignment length:95
41 51 61 71 81 91 101 111 121
H2B11_XENLA 32 KSRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 126
SCOP domains ----------------------------------------------------------------------------------------------- SCOP domains
CATH domains ----------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------HISTONE_H2B ----------- PROSITE
Transcript ----------------------------------------------------------------------------------------------- Transcript
3o62 D 28 KTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 122
37 47 57 67 77 87 97 107 117
Chain E from PDB Type:PROTEIN Length:98
aligned with H32_XENLA | P84233 from UniProtKB/Swiss-Prot Length:136
Alignment length:98
48 58 68 78 88 98 108 118 128
H32_XENLA 39 PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
SCOP domains -------------------------------------------------------------------------------------------------- SCOP domains
CATH domains -------------------------------------------------------------------------------------------------- CATH domains
Pfam domains (1) -------------------Histone-3o62E01 E:57-131 ---- Pfam domains (1)
Pfam domains (2) -------------------Histone-3o62E02 E:57-131 ---- Pfam domains (2)
Sec.struct. author .......hhhhhhhhhhhhh.....hhhhhhhhhhhhhhh.....eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------HISTONE_H------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------- Transcript
3o62 E 38 PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
47 57 67 77 87 97 107 117 127
Chain F from PDB Type:PROTEIN Length:84
aligned with H4_XENLA | P62799 from UniProtKB/Swiss-Prot Length:103
Alignment length:84
28 38 48 58 68 78 88 98
H4_XENLA 19 HRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFG 102
SCOP domains ------------------------------------------------------------------------------------ SCOP domains
CATH domains ------------------------------------------------------------------------------------ CATH domains
Pfam domains (1) ------Histone-3o62F01 F:24-93 -------- Pfam domains (1)
Pfam domains (2) ------Histone-3o62F02 F:24-93 -------- Pfam domains (2)
Sec.struct. author ............hhhhhhhhhhh....ee..hhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhh..ee... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------ Transcript
3o62 F 18 HRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFG 101
27 37 47 57 67 77 87 97
Chain G from PDB Type:PROTEIN Length:106
aligned with H2A1_XENLA | P06897 from UniProtKB/Swiss-Prot Length:130
Alignment length:106
24 34 44 54 64 74 84 94 104 114
H2A1_XENLA 15 AKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQSVLLPKK 120
SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains (1) ---Histone-3o62G01 G:17-90 ----------------------------- Pfam domains (1)
Pfam domains (2) ---Histone-3o62G02 G:17-90 ----------------------------- Pfam domains (2)
Sec.struct. author ............hhhhhhhhh...........hhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhh...ee................. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------HISTONE-------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------- Transcript
3o62 G 14 AKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPKK 119
23 33 43 53 63 73 83 93 103 113
Chain H from PDB Type:PROTEIN Length:95
aligned with H2B11_XENLA | P02281 from UniProtKB/Swiss-Prot Length:126
Alignment length:95
41 51 61 71 81 91 101 111 121
H2B11_XENLA 32 KSRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 126
SCOP domains ----------------------------------------------------------------------------------------------- SCOP domains
CATH domains ----------------------------------------------------------------------------------------------- CATH domains
Pfam domains (1) Histone-3o62H01 H:28-98 ------------------------ Pfam domains (1)
Pfam domains (2) Histone-3o62H02 H:28-98 ------------------------ Pfam domains (2)
Sec.struct. author ......hhhhhhhhhhh.....eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------HISTONE_H2B ----------- PROSITE
Transcript ----------------------------------------------------------------------------------------------- Transcript
3o62 H 28 KTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 122
37 47 57 67 77 87 97 107 117
Chain I from PDB Type:DNA Length:146
3o62 I 1 ATCAATATCCACCTGCAGATTCTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCACCGTGATTCCCCTCAACATCGGAAAACTACCTCGTCAAAGGTTTATGTGAAAACCATCTTAGACGTCCACCTATAACTA 146
10 20 30 40 50 60 70 80 90 100 110 120 130 140
Chain J from PDB Type:DNA Length:146
3o62 J 147 TAGTTATAGGTGGACGTCTAAGATGGTTTTCACATAAACCTTTGACGAGGTAGTTTTCCGATGTTGAGGGGAATCACGGTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGAATCTGCAGGTGGATATTGAT 292
156 166 176 186 196 206 216 226 236 246 256 266 276 286
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |