Chain A from PDB Type:PROTEIN Length:98
aligned with H32_XENLA | P84233 from UniProtKB/Swiss-Prot Length:136
Alignment length:98
48 58 68 78 88 98 108 118 128
H32_XENLA 39 PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
SCOP domains d1p3ia_ A: Histone H3 SCOP domains
CATH domains 1p3iA00 A:438-535 Histone, subunit A CATH domains
Pfam domains -------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhhhhhhhhhhh.......hhhhhhhhhhhhhhh.....eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhh.... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------HISTONE_H------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------- Transcript
1p3i A 438 PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 535
447 457 467 477 487 497 507 517 527
Chain B from PDB Type:PROTEIN Length:79
aligned with H4_XENLA | P62799 from UniProtKB/Swiss-Prot Length:103
Alignment length:79
34 44 54 64 74 84 94
H4_XENLA 25 DNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
SCOP domains d1p3ib_ B: Histone H4 SCOP domains
CATH domains 1p3iB00 B:24-102 Histone, subunit A CATH domains
Pfam domains ------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhh...ee..hhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhh..eee.... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------- Transcript
1p3i B 24 DNIQGITKPAIRRLARRGGVKHISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 102
33 43 53 63 73 83 93
Chain C from PDB Type:PROTEIN Length:103
aligned with H2A1_XENLA | P06897 from UniProtKB/Swiss-Prot Length:130
Alignment length:103
25 35 45 55 65 75 85 95 105 115
H2A1_XENLA 16 KTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQSVLLP 118
SCOP domains d1p3ic_ C: Histone H2A SCOP domains
CATH domains 1p3iC00 C:815-917 Histone, subunit A CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhh...hhhhhhhhhhhh....ee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhh..eee.........hhhhh. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------HISTONE------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------- Transcript
1p3i C 815 KTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLP 917
824 834 844 854 864 874 884 894 904 914
Chain D from PDB Type:PROTEIN Length:95
aligned with H2B11_XENLA | P02281 from UniProtKB/Swiss-Prot Length:126
Alignment length:95
41 51 61 71 81 91 101 111 121
H2B11_XENLA 32 KSRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 126
SCOP domains d1p3id_ D: Histone H2B SCOP domains
CATH domains 1p3iD00 D:1228-1322 Histone, subunit A CATH domains
Pfam domains ----------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------HISTONE_H2B ----------- PROSITE
Transcript ----------------------------------------------------------------------------------------------- Transcript
1p3i D 1228 KSRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 1322
1237 1247 1257 1267 1277 1287 1297 1307 1317
Chain E from PDB Type:PROTEIN Length:104
aligned with H32_XENLA | P84233 from UniProtKB/Swiss-Prot Length:136
Alignment length:104
42 52 62 72 82 92 102 112 122 132
H32_XENLA 33 TGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
SCOP domains d1p3ie_ E: Histone H3 SCOP domains
CATH domains 1p3iE00 E:632-735 Histone, subunit A CATH domains
Pfam domains (1) -------------------------Histone-1p3iE01 E:657-731 ---- Pfam domains (1)
Pfam domains (2) -------------------------Histone-1p3iE02 E:657-731 ---- Pfam domains (2)
Sec.struct. author ............hhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhh.... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------HISTONE_H------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------- Transcript
1p3i E 632 TGESKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 735
641 651 661 671 681 691 701 711 721 731
Chain F from PDB Type:PROTEIN Length:79
aligned with H4_XENLA | P62799 from UniProtKB/Swiss-Prot Length:103
Alignment length:79
34 44 54 64 74 84 94
H4_XENLA 25 DNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
SCOP domains d1p3if_ F: Histone H4 SCOP domains
CATH domains 1p3iF00 F:224-302 Histone, subunit A CATH domains
Pfam domains (1) Histone-1p3iF01 F:224-293 --------- Pfam domains (1)
Pfam domains (2) Histone-1p3iF02 F:224-293 --------- Pfam domains (2)
Sec.struct. author hhhhhhhhhhhhhhhhhh...ee..hhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhh..eee.... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------- Transcript
1p3i F 224 DNIQGITKPAIRRLARRGGVKHISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 302
233 243 253 263 273 283 293
Chain G from PDB Type:PROTEIN Length:104
aligned with H2A1_XENLA | P06897 from UniProtKB/Swiss-Prot Length:130
Alignment length:104
26 36 46 56 66 76 86 96 106 116
H2A1_XENLA 17 TRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQSVLLPKK 120
SCOP domains d1p3ig_ G: Histone H2A SCOP domains
CATH domains 1p3iG00 G:1016-1119 Histone, subunit A CATH domains
Pfam domains (1) -Histone-1p3iG01 G:1017-1090 ----------------------------- Pfam domains (1)
Pfam domains (2) -Histone-1p3iG02 G:1017-1090 ----------------------------- Pfam domains (2)
Sec.struct. author hhhhhhh...hhhhhhhhhhhh....ee.hhhhhhhhhhhhhhhhhhhhhhhhhhhh....eehhhhhhhhhhhhhhhhhhh..eee.........hhhhh... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -----HISTONE-------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------- Transcript
1p3i G 1016 TRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPKK 1119
1025 1035 1045 1055 1065 1075 1085 1095 1105 1115
Chain H from PDB Type:PROTEIN Length:94
aligned with H2B11_XENLA | P02281 from UniProtKB/Swiss-Prot Length:126
Alignment length:94
42 52 62 72 82 92 102 112 122
H2B11_XENLA 33 SRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 126
SCOP domains d1p3ih_ H: Histone H2B SCOP domains
CATH domains 1p3iH00 H:1429-1522 Histone, subunit A CATH domains
Pfam domains (1) Histone-1p3iH01 H:1429-1498 ------------------------ Pfam domains (1)
Pfam domains (2) Histone-1p3iH02 H:1429-1498 ------------------------ Pfam domains (2)
Sec.struct. author .....hhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------HISTONE_H2B ----------- PROSITE
Transcript ---------------------------------------------------------------------------------------------- Transcript
1p3i H 1429 SRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 1522
1438 1448 1458 1468 1478 1488 1498 1508 1518
Chain I from PDB Type:DNA Length:146
1p3i I 1 ATCAATATCCACCTGCAGATTCTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCGGAATTCCGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGAATCTGCAGGTGGATATTGAT 146
10 20 30 40 50 60 70 80 90 100 110 120 130 140
Chain J from PDB Type:DNA Length:146
1p3i J 147 ATCAATATCCACCTGCAGATTCTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCGGAATTCCGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGAATCTGCAGGTGGATATTGAT 292
156 166 176 186 196 206 216 226 236 246 256 266 276 286
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |