Chain A from PDB Type:PROTEIN Length:100
aligned with H32_XENLA | P84233 from UniProtKB/Swiss-Prot Length:136
Alignment length:100
46 56 66 76 86 96 106 116 126 136
H32_XENLA 37 KKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
SCOP domains d1p3pa_ A: Histone H3 SCOP domains
CATH domains 1p3pA00 A:436-535 Histone, subunit A CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ........hhhhhhhhhhhh.......hhhhhhhhhhhhhhh.....eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhh.... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------HISTONE_H------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------- Transcript
1p3p A 436 KKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 535
445 455 465 475 485 495 505 515 525 535
Chain B from PDB Type:PROTEIN Length:81
aligned with H4_XENLA | P62799 from UniProtKB/Swiss-Prot Length:103
Alignment length:81
32 42 52 62 72 82 92 102
H4_XENLA 23 LRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
SCOP domains d1p3pb_ B: Histone H4 SCOP domains
CATH domains 1p3pB00 B:22-102 Histone, subunit A CATH domains
Pfam domains --------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhhhhhhhh...ee..hhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhh...ee.... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------- Transcript
1p3p B 22 LRDNIQGITKPAIRRLARRGGIKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 102
31 41 51 61 71 81 91 101
Chain C from PDB Type:PROTEIN Length:107
aligned with H2A1_XENLA | P06897 from UniProtKB/Swiss-Prot Length:130
Alignment length:107
24 34 44 54 64 74 84 94 104 114
H2A1_XENLA 15 AKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQSVLLPKKT 121
SCOP domains d1p3pc_ C: Histone H2A SCOP domains
CATH domains 1p3pC00 C:814-920 Histone, subunit A CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhh...hhhhhhhhhhhh....ee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhh..eee.........hhhhh.... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------HISTONE--------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------- Transcript
1p3p C 814 AKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPKKT 920
823 833 843 853 863 873 883 893 903 913
Chain D from PDB Type:PROTEIN Length:93
aligned with H2B11_XENLA | P02281 from UniProtKB/Swiss-Prot Length:126
Alignment length:93
43 53 63 73 83 93 103 113 123
H2B11_XENLA 34 RKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 126
SCOP domains d1p3pd_ D: Histone H2B SCOP domains
CATH domains 1p3pD00 D:1230-1322 Histone, subunit A CATH domains
Pfam domains --------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....hhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -----------------------------------------------------------HISTONE_H2B ----------- PROSITE
Transcript --------------------------------------------------------------------------------------------- Transcript
1p3p D 1230 RKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 1322
1239 1249 1259 1269 1279 1289 1299 1309 1319
Chain E from PDB Type:PROTEIN Length:100
aligned with H32_XENLA | P84233 from UniProtKB/Swiss-Prot Length:136
Alignment length:100
46 56 66 76 86 96 106 116 126 136
H32_XENLA 37 KKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
SCOP domains d1p3pe_ E: Histone H3 SCOP domains
CATH domains 1p3pE00 E:636-735 Histone, subunit A CATH domains
Pfam domains (1) ---------------------Histone-1p3pE01 E:657-731 ---- Pfam domains (1)
Pfam domains (2) ---------------------Histone-1p3pE02 E:657-731 ---- Pfam domains (2)
Sec.struct. author ........hhhhhhhhhhhhhh.....hhhhhhhhhhhhhhh.....eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------HISTONE_H------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------- Transcript
1p3p E 636 KKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 735
645 655 665 675 685 695 705 715 725 735
Chain F from PDB Type:PROTEIN Length:82
aligned with H4_XENLA | P62799 from UniProtKB/Swiss-Prot Length:103
Alignment length:82
31 41 51 61 71 81 91 101
H4_XENLA 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
SCOP domains d1p3pf_ F: Histone H4 SCOP domains
CATH domains 1p3pF00 F:221-302 Histone, subunit A CATH domains
Pfam domains (1) ---Histone-1p3pF01 F:224-293 --------- Pfam domains (1)
Pfam domains (2) ---Histone-1p3pF02 F:224-293 --------- Pfam domains (2)
Sec.struct. author ...hhhhhhhhhhhhhhhhhh...ee..hhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhh..eee.... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------- Transcript
1p3p F 221 VLRDNIQGITKPAIRRLARRGGIKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 302
230 240 250 260 270 280 290 300
Chain G from PDB Type:PROTEIN Length:108
aligned with H2A1_XENLA | P06897 from UniProtKB/Swiss-Prot Length:130
Alignment length:108
22 32 42 52 62 72 82 92 102 112
H2A1_XENLA 13 AKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQSVLLPKK 120
SCOP domains d1p3pg_ G: Histone H2A SCOP domains
CATH domains 1p3pG00 G:1012-1119 Histone, subunit A CATH domains
Pfam domains (1) -----Histone-1p3pG01 G:1017-1090 ----------------------------- Pfam domains (1)
Pfam domains (2) -----Histone-1p3pG02 G:1017-1090 ----------------------------- Pfam domains (2)
Sec.struct. author ....hhhhhhh...hhhhhhhhhhh.....ee..hhhhhhhhhhhhhhhhhhhhhhhhhhh....eehhhhhhhhhhhhhhhhhhh...ee.........hhhhh... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ---------HISTONE-------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------ Transcript
1p3p G 1012 AKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPKK 1119
1021 1031 1041 1051 1061 1071 1081 1091 1101 1111
Chain H from PDB Type:PROTEIN Length:96
aligned with H2B11_XENLA | P02281 from UniProtKB/Swiss-Prot Length:126
Alignment length:96
40 50 60 70 80 90 100 110 120
H2B11_XENLA 31 RKSRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 126
SCOP domains d1p3ph_ H: Histone H2B SCOP domains
CATH domains 1p3pH00 H:1427-1522 Histone, subunit A CATH domains
Pfam domains (1) -Histone-1p3pH01 H:1428-1498 ------------------------ Pfam domains (1)
Pfam domains (2) -Histone-1p3pH02 H:1428-1498 ------------------------ Pfam domains (2)
Sec.struct. author .......hhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE --------------------------------------------------------------HISTONE_H2B ----------- PROSITE
Transcript ------------------------------------------------------------------------------------------------ Transcript
1p3p H 1427 RKSRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 1522
1436 1446 1456 1466 1476 1486 1496 1506 1516
Chain I from PDB Type:DNA Length:146
1p3p I 1 ATCAATATCCACCTGCAGATTCTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCGGAATTCCGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGAATCTGCAGGTGGATATTGAT 146
10 20 30 40 50 60 70 80 90 100 110 120 130 140
Chain J from PDB Type:DNA Length:146
1p3p J 147 ATCAATATCCACCTGCAGATTCTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCGGAATTCCGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGAATCTGCAGGTGGATATTGAT 292
156 166 176 186 196 206 216 226 236 246 256 266 276 286
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |