Chain A from PDB Type:PROTEIN Length:98
aligned with H32_XENLA | P84233 from UniProtKB/Swiss-Prot Length:136
Alignment length:98
48 58 68 78 88 98 108 118 128
H32_XENLA 39 PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
SCOP domains d1p34a_ A: Histone H3 SCOP domains
CATH domains 1p34A00 A:438-535 Histone, subunit A CATH domains
Pfam domains -------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhhhhhhhhhhhhh.....hhhhhhhhhhhhhhh.....eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhh.... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------HISTONE_H------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------- Transcript
1p34 A 438 PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKAVTIMPKDIQLARRIRGERA 535
447 457 467 477 487 497 507 517 527
Chain B from PDB Type:PROTEIN Length:83
aligned with H4_XENLA | P62799 from UniProtKB/Swiss-Prot Length:103
Alignment length:83
30 40 50 60 70 80 90 100
H4_XENLA 21 KVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
SCOP domains d1p34b_ B: Histone H4 SCOP domains
CATH domains 1p34B00 B:20-102 Histone, subunit A CATH domains
Pfam domains ----------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .....hhhhhhhhhhhhhhhhh...ee..hhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhh..eee.... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------- Transcript
1p34 B 20 KVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 102
29 39 49 59 69 79 89 99
Chain C from PDB Type:PROTEIN Length:107
aligned with H2A1_XENLA | P06897 from UniProtKB/Swiss-Prot Length:130
Alignment length:107
22 32 42 52 62 72 82 92 102 112
H2A1_XENLA 13 AKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQSVLLPK 119
SCOP domains d1p34c_ C: Histone H2A SCOP domains
CATH domains 1p34C00 C:812-918 Histone, subunit A CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....hhhhhhh...hhhhhhhhhhhh....ee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhh..eee.........hhhhh.. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------HISTONE------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------- Transcript
1p34 C 812 AKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPK 918
821 831 841 851 861 871 881 891 901 911
Chain D from PDB Type:PROTEIN Length:92
aligned with H2B11_XENLA | P02281 from UniProtKB/Swiss-Prot Length:126
Alignment length:92
43 53 63 73 83 93 103 113 123
H2B11_XENLA 34 RKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSA 125
SCOP domains d1p34d_ D: Histone H2B SCOP domains
CATH domains 1p34D00 D:1230-1321 Histone, subunit A CATH domains
Pfam domains -------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....hhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -----------------------------------------------------------HISTONE_H2B ---------- PROSITE
Transcript -------------------------------------------------------------------------------------------- Transcript
1p34 D 1230 RKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSA 1321
1239 1249 1259 1269 1279 1289 1299 1309 1319
Chain E from PDB Type:PROTEIN Length:96
aligned with H32_XENLA | P84233 from UniProtKB/Swiss-Prot Length:136
Alignment length:96
48 58 68 78 88 98 108 118 128
H32_XENLA 39 PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 134
SCOP domains d1p34e_ E: Histone H3 SCOP domains
CATH domains 1p34E00 E:638-733 Histone, subunit A CATH domains
Pfam domains (1) -------------------Histone-1p34E01 E:657-731 -- Pfam domains (1)
Pfam domains (2) -------------------Histone-1p34E02 E:657-731 -- Pfam domains (2)
Sec.struct. author ......hhhhhhhhhhhh.......hhhhhhhhhhhhhhh.....eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ----------------------------HISTONE_H----------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------ Transcript
1p34 E 638 PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKAVTIMPKDIQLARRIRGE 733
647 657 667 677 687 697 707 717 727
Chain F from PDB Type:PROTEIN Length:81
aligned with H4_XENLA | P62799 from UniProtKB/Swiss-Prot Length:103
Alignment length:81
32 42 52 62 72 82 92 102
H4_XENLA 23 LRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
SCOP domains d1p34f_ F: Histone H4 SCOP domains
CATH domains 1p34F00 F:222-302 Histone, subunit A CATH domains
Pfam domains (1) --Histone-1p34F01 F:224-293 --------- Pfam domains (1)
Pfam domains (2) --Histone-1p34F02 F:224-293 --------- Pfam domains (2)
Sec.struct. author ..hhhhhhhhhhhhhhhhhh...ee..hhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhh..eee.... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------- Transcript
1p34 F 222 LRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 302
231 241 251 261 271 281 291 301
Chain G from PDB Type:PROTEIN Length:107
aligned with H2A1_XENLA | P06897 from UniProtKB/Swiss-Prot Length:130
Alignment length:107
23 33 43 53 63 73 83 93 103 113
H2A1_XENLA 14 KAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQSVLLPKK 120
SCOP domains d1p34g_ G: Histone H2A SCOP domains
CATH domains 1p34G00 G:1013-1119 Histone, subunit A CATH domains
Pfam domains (1) ----Histone-1p34G01 G:1017-1090 ----------------------------- Pfam domains (1)
Pfam domains (2) ----Histone-1p34G02 G:1017-1090 ----------------------------- Pfam domains (2)
Sec.struct. author ...hhhhhhh...hhhhhhhhhhhh....ee..hhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhh..eee.........hhhhh... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------HISTONE-------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------- Transcript
1p34 G 1013 KAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPKK 1119
1022 1032 1042 1052 1062 1072 1082 1092 1102 1112
Chain H from PDB Type:PROTEIN Length:94
aligned with H2B11_XENLA | P02281 from UniProtKB/Swiss-Prot Length:126
Alignment length:94
41 51 61 71 81 91 101 111 121
H2B11_XENLA 32 KSRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSA 125
SCOP domains d1p34h_ H: Histone H2B SCOP domains
CATH domains 1p34H00 H:1428-1521 Histone, subunit A CATH domains
Pfam domains (1) Histone-1p34H01 H:1428-1498 ----------------------- Pfam domains (1)
Pfam domains (2) Histone-1p34H02 H:1428-1498 ----------------------- Pfam domains (2)
Sec.struct. author ......hhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------HISTONE_H2B ---------- PROSITE
Transcript ---------------------------------------------------------------------------------------------- Transcript
1p34 H 1428 KSRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSA 1521
1437 1447 1457 1467 1477 1487 1497 1507 1517
Chain I from PDB Type:DNA Length:146
1p34 I 1 ATCAATATCCACCTGCAGATTCTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCGGAATTCCGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGAATCTGCAGGTGGATATTGAT 146
10 20 30 40 50 60 70 80 90 100 110 120 130 140
Chain J from PDB Type:DNA Length:146
1p34 J 147 ATCAATATCCACCTGCAGATTCTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCGGAATTCCGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGAATCTGCAGGTGGATATTGAT 292
156 166 176 186 196 206 216 226 236 246 256 266 276 286
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |