SCOP 2.04 - JenaLib Tree Browser

Fold: Profilin-like (304)

Superfamily: GAF domain-like (54)

Family: automated matches (19)

Protein domain: automated matches (19)

Arthrobacter aurescens [TaxId: 290340] (1)

3OBF

A:; B:

CRYSTAL STRUCTURE OF PUTATIVE TRANSCRIPTIONAL REGULATOR, ICLR FAMILY; TARGETED DOMAIN 129...302

Escherichia coli [TaxId: 562] (2)

1YSP	A:	CRYSTAL STRUCTURE OF THE C-TERMINAL DOMAIN OF E. COLI TRANSCRIPTIONAL REGULATOR KDGR.
1YSQ	A:	THE CRYSTAL STRUCTURE OF TRANSCRIPTIONAL REGULATOR YAIJ

Neisseria meningitidis [TaxId: 604162] (1)

3MMH

A:; B:

X-RAY STRUCTURE OF FREE METHIONINE-R-SULFOXIDE REDUCTASE FROM NEISSERIA MENINGITIDIS IN COMPLEX WITH ITS SUBSTRATE

Pseudomonas aeruginosa [TaxId: 208964] (1)

3NOU

C:310-496

LIGHT-INDUCED INTERMEDIATE STRUCTURE L3 OF P. AERUGINOSA BACTERIOPHYTOCHROME

Pseudomonas aeruginosa [TaxId: 287] (2)

3G6O	A:118-309; A:310-494; B:118-309; B:310-494	CRYSTAL STRUCTURE OF P. AERUGINOSA BACTERIOPHYTOCHROME PABPHP PHOTOSENSORY CORE DOMAIN MUTANT Q188L
3IBR	A:118-309; A:310-494; B:118-309; B:310-494	CRYSTAL STRUCTURE OF P. AERUGINOSA BACTERIOPHYTOCHROME PHOTOSENSORY CORE MODULE MUTANT Q188L IN THE MIXED PR/PFR STATE

Rhodopseudomonas palustris [TaxId: 258594] (1)

4E04

A:127-320; B:127-320

RPBPHP2 CHROMOPHORE-BINDING DOMAIN CRYSTALLIZED BY HOMOLOGUE-DIRECTED MUTAGENESIS.

Staphylococcus aureus [TaxId: 282458] (4)

3KSF	A:; B:; C:; D:; E:; F:; G:; H:	STRUCTURE OF FRMSR OF STAPHYLOCOCCUS AUREUS (REDUCED FORM)
3KSG	A:; B:	STRUCTURE OF FRMSR OF STAPHYLOCOCCUS AUREUS (COMPLEX WITH SUBSTRATE)
3KSH	A:	STRUCTURE OF FRMSR OF STAPHYLOCOCCUS AUREUS (OXIDIZED FORM)
3KSI	A:	STRUCTURE OF FRMSR OF STAPHYLOCOCCUS AUREUS (COMPLEX WITH 2-PROPANOL)

Streptococcus pneumoniae [TaxId: 171101] (1)

3RFB

A:; B:

STRUCTURE OF FRMSR

Synechocystis sp. [TaxId: 1148] (1)

3ZQ5

A:131-326; A:327-518

STRUCTURE OF THE Y263F MUTANT OF THE CYANOBACTERIAL PHYTOCHROME CPH1

Thermosynechococcus elongatus [TaxId: 197221] (5)

2M7U	A:	BLUE LIGHT-ABSORBING STATE OF TEPIXJ, AN ACTIVE CYANOBACTERIOCHROME DOMAIN
2M7V	A:	GREEN LIGHT-ABSORBING STATE OF TEPIXJ, AN ACTIVE CYANOBACTERIOCHROME DOMAIN
3VV4	A:; B:	CRYSTAL STRUCTURE OF CYANOBACTERIOCHROME TEPIXJ GAF DOMAIN
4FOF	A:	CRYSTAL STRUCTURE OF THE BLUE-LIGHT ABSORBING FORM OF THE THERMOSYNECHOCOCCUS ELONGATUS PIXJ GAF-DOMAIN
4GLQ	A:	CRYSTAL STRUCTURE OF THE BLUE-LIGHT ABSORBING FORM OF THE THERMOSYNECHOCOCCUS ELONGATUS PIXJ GAF-DOMAIN

Family: GAF domain (24)

Protein domain: 3',5'-cyclic nucleotide phosphodiesterase 2A, GAF A and GAF B domains (1)

Mouse (Mus musculus) [TaxId: 10090] (1)

1MC0

A:215-401; A:402-555

REGULATORY SEGMENT OF MOUSE 3',5'-CYCLIC NUCLEOTIDE PHOSPHODIESTERASE 2A, CONTAINING THE GAF A AND GAF B DOMAINS

Protein domain: automated matches (5)

Deinococcus radiodurans [TaxId: 1299] (4)

3S7N	A:135-323	CRYSTAL STRUCTURE OF THE ALTERNATE HIS 207 CONFORMATION OF THE INFRARED FLUORESCENT D207H VARIANT OF DEINOCOCCUS BACTERIOPHYTOCHROME CHROMOPHORE BINDING DOMAIN AT 2.45 ANGSTROM RESOLUTION
3S7O	A:135-323	CRYSTAL STRUCTURE OF THE INFRARED FLUORESCENT D207H VARIANT OF DEINOCOCCUS BACTERIOPHYTOCHROME CHROMOPHORE BINDING DOMAIN AT 1.24 ANGSTROM RESOLUTION
3S7P	A:135-323	CRYSTAL STRUCTURE OF THE INFRARED FLUORESCENT D207H VARIANT OF DEINOCOCCUS BACTERIOPHYTOCHROME CHROMOPHORE BINDING DOMAIN AT 1.72 ANGSTROM RESOLUTION
3S7Q	A:138-323	CRYSTAL STRUCTURE OF A MONOMERIC INFRARED FLUORESCENT DEINOCOCCUS RADIODURANS BACTERIOPHYTOCHROME CHROMOPHORE BINDING DOMAIN

Deinococcus radiodurans [TaxId: 243230] (1)

4IJG

A:137-323

CRYSTAL STRUCTURE OF MONOMERIC BACTERIOPHYTOCHROME

Protein domain: Bacteriophytochrome BphP (8)

Deinococcus radiodurans [TaxId: 1299] (3)

1ZTU	A:137-325	STRUCTURE OF THE CHROMOPHORE BINDING DOMAIN OF BACTERIAL PHYTOCHROME
2O9B	A:135-321	CRYSTAL STRUCTURE OF BACTERIOPHYTOCHROME CHROMOPHORE BINDING DOMAIN
2O9C	A:135-322	CRYSTAL STRUCTURE OF BACTERIOPHYTOCHROME CHROMOPHORE BINDING DOMAIN AT 1.45 ANGSTROM RESOLUTION

Pseudomonas aeruginosa [TaxId: 287] (5)

3C2W	A:118-309; B:118-309; C:118-309; D:118-309; E:118-309; F:118-309; G:118-309; H:118-309	CRYSTAL STRUCTURE OF THE PHOTOSENSORY CORE DOMAIN OF P. AERUGINOSA BACTERIOPHYTOCHROME PABPHP IN THE PFR STATE
3NHQ	A:118-309; B:118-309; C:118-309; D:118-309; E:118-309; F:118-309; G:118-309; H:118-309	THE DARK PFR STRUCTURE OF THE PHOTOSENSORY CORE MODULE OF P. AERUGINOSA BACTERIOPHYTOCHROME
3NOP	C:118-309	LIGHT-INDUCED INTERMEDIATE STRUCTURE L1 OF PSEUDOMONAS AERUGINOSA BACTERIOPHYTOCHROME
3NOT	C:118-309	LIGHT-INDUCED INTERMEDIATE STRUCTURE L2 OF P. AERUGINOSA BACTERIOPHYTOCHROME
3NOU	C:118-309	LIGHT-INDUCED INTERMEDIATE STRUCTURE L3 OF P. AERUGINOSA BACTERIOPHYTOCHROME

Protein domain: Hypothetical protein YebR (1)

Escherichia coli [TaxId: 562] (1)

1VHM

A:; B:

CRYSTAL STRUCTURE OF AN HYPOTHETICAL PROTEIN

Protein domain: Hypothetical protein ykl069wp (2)

Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (2)

1F5M	A:; B:	STRUCTURE OF THE GAF DOMAIN
3KO6	A:; B:	CRYSTAL STRUCTURE OF YEAST FREE METHIONINE-R-SULFOXIDE REDUCTASE YKG9 IN COMPLEX WITH THE SUBSTRATE

Protein domain: Phytochrome-like protein Cph1 (1)

Synechocystis sp. PCC 6803 [TaxId: 1148] (1)

2VEA

A:131-326

THE COMPLETE SENSORY MODULE OF THE CYANOBACTERIAL PHYTOCHROME CPH1 IN THE PR-STATE.

Protein domain: Sensor protein CYB2465 (5)

Synechococcus sp. [TaxId: 1131] (4)

2K2N	A:31-200	SOLUTION STRUCTURE OF A CYANOBACTERIAL PHYTOCHROME GAF DOMAIN IN THE RED LIGHT-ABSORBING GROUND STATE
2KOI	A:	REFINED SOLUTION STRUCTURE OF A CYANOBACTERIAL PHYTOCHROME GAF DOMAIN IN THE RED LIGHT-ABSORBING GROUND STATE
2LB5	A:	REFINED STRUCTURAL BASIS FOR THE PHOTOCONVERSION OF A PHYTOCHROME TO THE ACTIVATED FAR-RED LIGHT-ABSORBING FORM
2LB9	A:	REFINED SOLUTION STRUCTURE OF A CYANOBACTERIAL PHYTOCHROME GAF DOMAIN IN THE RED LIGHT-ABSORBING GROUND STATE (CORRECTED PYRROLE RING PLANARITY)

Synechococcus sp. [TaxId: 321332] (1)

2KLI

STRUCTURAL BASIS FOR THE PHOTOCONVERSION OF A PHYTOCHROME TO THE ACTIVATED FAR-RED LIGHT-ABSORBING FORM

Protein domain: Sensor protein PhyB2 (1)

Rhodopseudomonas palustris [TaxId: 1076] (1)

2OOL

A:140-333; B:143-332

CRYSTAL STRUCTURE OF THE CHROMOPHORE-BINDING DOMAIN OF AN UNUSUAL BACTERIOPHYTOCHROME RPBPHP3 FROM R. PALUSTRIS

Family: HrcA C-terminal domain-like (1)

Protein domain: Heat-inducible transcription repressor HrcA, C-terminal domain (1)

Thermotoga maritima [TaxId: 2336] (1)

1STZ

A:101-336; B:111-336; C:111-336

CRYSTAL STRUCTURE OF A HYPOTHETICAL PROTEIN AT 2.2 A RESOLUTION

Family: IclR ligand-binding domain-like (5)

Protein domain: Transcriptional regulator AllR, C-terminal domain (1)

Escherichia coli [TaxId: 562] (1)

1TF1

A:; B:; C:; D:

CRYSTAL STRUCTURE OF THE E. COLI GLYOXYLATE REGULATORY PROTEIN LIGAND BINDING DOMAIN

Protein domain: Transcriptional regulator IclR, C-terminal domain (4)

Escherichia coli [TaxId: 562] (3)

1TD5	A:; C:; D:; B:	CRYSTAL STRUCTURE OF THE LIGAND BINDING DOMAIN OF E. COLI ICLR.
2O99	A:; B:; C:; D:	THE CRYSTAL STRUCTURE OF E.COLI ICLR C-TERMINAL FRAGMENT IN COMPLEX WITH GLYOXYLATE
2O9A	A:; B:; C:; D:	THE CRYSTAL STRUCTURE OF THE E.COLI ICLR C-TERMINAL FRAGMENT IN COMPLEX WITH PYRUVATE.

Thermotoga maritima [TaxId: 2336] (1)

1MKM

A:76-246; B:76-246

CRYSTAL STRUCTURE OF THE THERMOTOGA MARITIMA ICLR

Family: Phytochrome-specific domain (5)

Protein domain: Bacteriophytochrome BphP (4)

Pseudomonas aeruginosa [TaxId: 287] (4)

3C2W	A:310-494; B:310-497; C:310-496; D:310-496; E:310-495; F:310-498; G:310-497; H:310-496	CRYSTAL STRUCTURE OF THE PHOTOSENSORY CORE DOMAIN OF P. AERUGINOSA BACTERIOPHYTOCHROME PABPHP IN THE PFR STATE
3NHQ	A:310-494; B:310-497; C:310-496; D:310-496; E:310-495; F:310-498; G:310-497; H:310-496	THE DARK PFR STRUCTURE OF THE PHOTOSENSORY CORE MODULE OF P. AERUGINOSA BACTERIOPHYTOCHROME
3NOP	C:310-496	LIGHT-INDUCED INTERMEDIATE STRUCTURE L1 OF PSEUDOMONAS AERUGINOSA BACTERIOPHYTOCHROME
3NOT	C:310-496	LIGHT-INDUCED INTERMEDIATE STRUCTURE L2 OF P. AERUGINOSA BACTERIOPHYTOCHROME

Protein domain: Phytochrome-like protein Cph1 (1)

Synechocystis sp. PCC 6803 [TaxId: 1148] (1)

2VEA

A:327-514

THE COMPLETE SENSORY MODULE OF THE CYANOBACTERIAL PHYTOCHROME CPH1 IN THE PR-STATE.

Superfamily: GlcG-like (1)

Family: GlcG-like (1)

Protein domain: DhaI homolog (1)

Klebsiella pneumoniae [TaxId: 573] (1)

2A2L

A:4-145; B:; C:; D:

CRYSTAL STRUCTURE OF KLEBSIELLA PNEUMONIAE PROTEIN ORFY, PFAM DUF336

Superfamily: Pheromone-binding domain of LuxR-like quorum-sensing transcription factors (2)

Family: Pheromone-binding domain of LuxR-like quorum-sensing transcription factors (2)

Protein domain: Transcription factor TraR, N-terminal domain (2)

Agrobacterium tumefaciens [TaxId: 358] (2)

1H0M	A:1-165; B:1-169; C:1-164; D:2-169	THREE-DIMENSIONAL STRUCTURE OF THE QUORUM SENSING PROTEIN TRAR BOUND TO ITS AUTOINDUCER AND TO ITS TARGET DNA
1L3L	A:2-169; B:2-169; C:1-162; D:1-162	CRYSTAL STRUCTURE OF A BACTERIAL QUORUM-SENSING TRANSCRIPTION FACTOR COMPLEXED WITH PHEROMONE AND DNA

Superfamily: Profilin (actin-binding protein) (31)

Family: automated matches (2)

Protein domain: automated matches (2)

Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896] (2)

3D9Y	A:; B:	CRYSTAL STRUCTURE OF PROFILIN FROM SCHIZOSACCHAROMYCES POMBE
3DAV	A:; B:	SCHIZOSACCHAROMYCES POMBE PROFILIN CRYSTALLIZED FROM SODIUM FORMATE

Family: Profilin (actin-binding protein) (29)

Protein domain: automated matches (6)

Human (Homo sapiens) [TaxId: 9606] (3)

2PAV	P:	TERNARY COMPLEX OF PROFILIN-ACTIN WITH THE LAST POLY-PRO OF HUMAN VASP
2PBD	P:	TERNARY COMPLEX OF PROFILIN-ACTIN WITH THE POLY-PRO-GAB DOMAIN OF VASP*
3CHW	P:	COMPLEX OF DICTYOSTELIUM DISCOIDEUM ACTIN WITH PROFILIN AND THE LAST POLY-PRO OF HUMAN VASP

Mouse (Mus musculus) [TaxId: 10090] (1)

2V8C

MOUSE PROFILIN IIA IN COMPLEX WITH THE PROLINE-RICH DOMAIN OF VASP

Norway rat (Rattus norvegicus) [TaxId: 10116] (1)

2VK3

CRYSTAL STRUCTURE OF RAT PROFILIN 2A

Peanut (Arachis hypogaea) [TaxId: 3818] (1)

4ESP

CRYSTAL STRUCTURE OF PEANUT ALLERGEN ARA H 5

Protein domain: Profilin (actin-binding protein) (23)

Acanthamoeba castellanii [TaxId: 5755] (5)

1ACF	A:	ACANTHAMOEBA CASTELLANII PROFILIN IB
1F2K	A:; B:	CRYSTAL STRUCTURE OF ACANTHAMOEBA CASTELLANII PROFILIN II, CUBIC CRYSTAL FORM
1PRQ	A:	ACANTHAMOEBA CASTELLANII PROFILIN IA
2ACG	A:	ACANTHAMOEBA CASTELLANII PROFILIN II
2PRF	A:	THREE DIMENSIONAL SOLUTION STRUCTURE OF ACANTHAMOEBA PROFILIN I

Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (2)

1K0K	A:	YEAST PROFILIN, CUBIC CRYSTAL FORM
1YPR	A:; B:	SACCHAROMYCES CEREVISIAE (YEAST) PROFILIN

Birch (Betula verrucosa) [TaxId: 3505] (1)

1CQA

BIRCH POLLEN PROFILIN

Cow (Bos taurus) [TaxId: 9913] (5)

1HLU	P:	STRUCTURE OF BOVINE BETA-ACTIN-PROFILIN COMPLEX WITH ACTIN BOUND ATP PHOSPHATES SOLVENT ACCESSIBLE
1PNE	A:	CRYSTALLIZATION AND STRUCTURE DETERMINATION OF BOVINE PROFILIN AT 2.0 ANGSTROMS RESOLUTION
2BTF	P:	THE STRUCTURE OF CRYSTALLINE PROFILIN-BETA-ACTIN
3U4L	P:	CRYOCOOLED BOVINE PROFILIN:ACTIN CRYSTAL STRUCTURE TO 2.4 A
3UB5	P:	PROFILIN:ACTIN WITH A WIDE OPEN NUCLEOTIDE CLEFT

Human (Homo sapiens), isoform I [TaxId: 9606] (6)

1AWI	A:; B:	HUMAN PLATELET PROFILIN COMPLEXED WITH THE L-PRO10 PEPTIDE
1CF0	A:; B:	HUMAN PLATELET PROFILIN COMPLEXED WITH AN L-PRO10-IODOTYROSINE PEPTIDE
1CJF	A:; B:	PROFILIN BINDS PROLINE-RICH LIGANDS IN TWO DISTINCT AMIDE BACKBONE ORIENTATIONS
1FIK	A:	HUMAN PLATELET PROFILIN I CRYSTALLIZED IN LOW SALT
1FIL	A:	HUMAN PLATELET PROFILIN I CRYSTALLIZED IN HIGH SALT ACTIN-BINDING PROTEIN
1PFL	A:	REFINED SOLUTION STRUCTURE OF HUMAN PROFILIN I

Human (Homo sapiens), isoform II [TaxId: 9606] (1)

1D1J

A:; B:; C:; D:

CRYSTAL STRUCTURE OF HUMAN PROFILIN II

Rubber tree (Hevea brasiliensis), hevb8 [TaxId: 3981] (1)

1G5U

A:; B:

LATEX PROFILIN HEVB8

Thale cress (Arabidopsis thaliana) [TaxId: 3702] (2)

1A0K	A:	PROFILIN I FROM ARABIDOPSIS THALIANA
3NUL	A:	PROFILIN I FROM ARABIDOPSIS THALIANA

Superfamily: PYP-like sensor domain (PAS domain) (163)

Family: automated matches (33)

Protein domain: automated matches (33)

Azotobacter vinelandii [TaxId: 354] (1)

2GJ3

A:; B:

CRYSTAL STRUCTURE OF THE FAD-CONTAINING PAS DOMAIN OF THE PROTEIN NIFL FROM AZOTOBACTER VINELANDII.

Bacillus subtilis [TaxId: 1423] (2)

2PR5	A:; B:	STRUCTURAL BASIS FOR LIGHT-DEPENDENT SIGNALING IN THE DIMERIC LOV PHOTOSENSOR YTVA (DARK STRUCTURE)
2PR6	A:; B:	STRUCTURAL BASIS FOR LIGHT-DEPENDENT SIGNALING IN THE DIMERIC LOV PHOTOSENSOR YTVA (LIGHT STRUCTURE)

Brucella melitensis [TaxId: 29459] (1)

3T50

A:; B:

X-RAY STRUCTURE OF THE LOV DOMAIN FROM THE LOV-HK SENSORY PROTEIN FROM BRUCELLA ABORTUS (DARK STATE).

Deinococcus radiodurans [TaxId: 1299] (4)

3S7N	A:7-130	CRYSTAL STRUCTURE OF THE ALTERNATE HIS 207 CONFORMATION OF THE INFRARED FLUORESCENT D207H VARIANT OF DEINOCOCCUS BACTERIOPHYTOCHROME CHROMOPHORE BINDING DOMAIN AT 2.45 ANGSTROM RESOLUTION
3S7O	A:5-130	CRYSTAL STRUCTURE OF THE INFRARED FLUORESCENT D207H VARIANT OF DEINOCOCCUS BACTERIOPHYTOCHROME CHROMOPHORE BINDING DOMAIN AT 1.24 ANGSTROM RESOLUTION
3S7P	A:5-130	CRYSTAL STRUCTURE OF THE INFRARED FLUORESCENT D207H VARIANT OF DEINOCOCCUS BACTERIOPHYTOCHROME CHROMOPHORE BINDING DOMAIN AT 1.72 ANGSTROM RESOLUTION
3S7Q	A:7-130	CRYSTAL STRUCTURE OF A MONOMERIC INFRARED FLUORESCENT DEINOCOCCUS RADIODURANS BACTERIOPHYTOCHROME CHROMOPHORE BINDING DOMAIN

Deinococcus radiodurans [TaxId: 243230] (1)

4IJG

A:7-130

CRYSTAL STRUCTURE OF MONOMERIC BACTERIOPHYTOCHROME

Fruit fly (Drosophila melanogaster) [TaxId: 7227] (1)

4HP4

A:; B:

CRYSTAL STRUCTURE OF PAS DOMAIN FROM THE FRUIT-FLY ELK POTASSIUM CHANNEL

Human (Homo sapiens) [TaxId: 9606] (15)

1X0O	A:	HUMAN ARNT C-TERMINAL PAS DOMAIN
2A24	B:	HADDOCK STRUCTURE OF HIF-2A/ARNT PAS-B HETERODIMER
2B02	A:	CRYSTAL STRUCTURE OF ARNT PAS-B DOMAIN
2HV1	A:; B:	HADDOCK STRUCTURE OF ARNT PAS-B HOMODIMER
2K7S	A:	HUMAN ARNT C-TERMINAL PAS DOMAIN, 3 RESIDUE IB SLIP
2KDK	A:	STRUCTURE OF HUMAN CIRCADIAN CLOCK PROTEIN BMAL2 C-TERMINAL PAS DOMAIN
3F1N	B:	CRYSTAL STRUCTURE OF A HIGH AFFINITY HETERODIMER OF HIF2 ALPHA AND ARNT C-TERMINAL PAS DOMAINS, WITH INTERNALLY BOUND ETHYLENE GLYCOL.
3F1O	B:	CRYSTAL STRUCTURE OF THE HIGH AFFINITY HETERODIMER OF HIF2 ALPHA AND ARNT C-TERMINAL PAS DOMAINS, WITH AN INTERNALLY-BOUND ARTIFICIAL LIGAND
3F1P	B:	CRYSTAL STRUCTURE OF A HIGH AFFINITY HETERODIMER OF HIF2 ALPHA AND ARNT C-TERMINAL PAS DOMAINS
3H7W	B:	CRYSTAL STRUCTURE OF THE HIGH AFFINITY HETERODIMER OF HIF2 ALPHA AND ARNT C-TERMINAL PAS DOMAINS WITH THE ARTIFICIAL LIGAND THS017
3H82	B:	CRYSTAL STRUCTURE OF THE HIGH AFFINITY HETERODIMER OF HIF2 ALPHA AND ARNT C-TERMINAL PAS DOMAINS WITH THE ARTIFICIAL LIGAND THS020
4EQ1	A:; B:	CRYSTAL STRUCTURE OF THE ARNT PAS-B HOMODIMER
4GHI	B:	CRYSTAL STRUCTURE OF THE HIGH AFFINITY HETERODIMER OF HIF2 ALPHA AND ARNT C-TERMINAL PAS DOMAINS IN COMPLEX WITH A BENZOXADIAZOLE ANTAGONIST
4GS9	B:	CRYSTAL STRUCTURE OF THE HIGH AFFINITY HETERODIMER OF HIF2 ALPHA AND ARNT C-TERMINAL PAS DOMAINS IN COMPLEX WITH AN INACTIVE BENZOXADIAZOLE ANTAGONIST
4H6J	B:	IDENTIFICATION OF CYS 255 IN HIF-1 AS A NOVEL SITE FOR DEVELOPMENT OF COVALENT INHIBITORS OF HIF-1 /ARNT PASB DOMAIN PROTEIN-PROTEIN INTERACTION.

Mouse (Mus musculus) [TaxId: 10090] (2)

4HOI	A:; B:; C:; D:	CRYSTAL STRUCTURE OF PAS DOMAIN FROM THE MOUSE EAG1 POTASSIUM CHANNEL
4LLO	B:; D:; F:; H:	STRUCTURE OF THE EAG DOMAIN-CNBHD COMPLEX OF THE MOUSE EAG1 CHANNEL

Pseudomonas putida [TaxId: 160488] (1)

3SW1

A:; B:

STRUCTURE OF A FULL-LENGTH BACTERIAL LOV PROTEIN

Rhodopseudomonas palustris [TaxId: 258594] (1)

4E04

A:13-126; B:11-126

RPBPHP2 CHROMOPHORE-BINDING DOMAIN CRYSTALLIZED BY HOMOLOGUE-DIRECTED MUTAGENESIS.

Synechocystis sp. [TaxId: 1148] (1)

3ZQ5

A:2-130

STRUCTURE OF THE Y263F MUTANT OF THE CYANOBACTERIAL PHYTOCHROME CPH1

Thale cress (Arabidopsis thaliana) [TaxId: 3702] (1)

2Z6C

A:; B:

CRYSTAL STRUCTURE OF LOV1 DOMAIN OF PHOTOTROPIN1 FROM ARABIDOPSIS THALIANA

Vaucheria frigida [TaxId: 195983] (2)

3UE6	A:; B:; C:; D:; E:; F:	THE DARK STRUCTURE OF THE BLUE-LIGHT PHOTORECEPTOR AUREOCHROME1 LOV
3ULF	A:; E:; F:; B:; C:; D:	THE LIGHT STATE STRUCTURE OF THE BLUE-LIGHT PHOTORECEPTOR AUREOCHROME1 LOV

Family: BphP N-terminal domain-like (12)

Protein domain: Bacteriophytochrome BphP (10)

Deinococcus radiodurans [TaxId: 1299] (3)

1ZTU	A:5-130	STRUCTURE OF THE CHROMOPHORE BINDING DOMAIN OF BACTERIAL PHYTOCHROME
2O9B	A:4-130	CRYSTAL STRUCTURE OF BACTERIOPHYTOCHROME CHROMOPHORE BINDING DOMAIN
2O9C	A:4-130	CRYSTAL STRUCTURE OF BACTERIOPHYTOCHROME CHROMOPHORE BINDING DOMAIN AT 1.45 ANGSTROM RESOLUTION

Pseudomonas aeruginosa [TaxId: 287] (7)

3C2W	A:5-117; B:5-117; C:5-117; D:5-117; E:5-115; F:5-117; G:5-117; H:5-117	CRYSTAL STRUCTURE OF THE PHOTOSENSORY CORE DOMAIN OF P. AERUGINOSA BACTERIOPHYTOCHROME PABPHP IN THE PFR STATE
3G6O	A:6-117; B:6-117	CRYSTAL STRUCTURE OF P. AERUGINOSA BACTERIOPHYTOCHROME PABPHP PHOTOSENSORY CORE DOMAIN MUTANT Q188L
3IBR	A:6-117; B:6-117	CRYSTAL STRUCTURE OF P. AERUGINOSA BACTERIOPHYTOCHROME PHOTOSENSORY CORE MODULE MUTANT Q188L IN THE MIXED PR/PFR STATE
3NHQ	A:5-117; B:5-117; C:5-117; D:5-117; E:5-117; F:5-117; G:5-117; H:5-117	THE DARK PFR STRUCTURE OF THE PHOTOSENSORY CORE MODULE OF P. AERUGINOSA BACTERIOPHYTOCHROME
3NOP	C:4-117	LIGHT-INDUCED INTERMEDIATE STRUCTURE L1 OF PSEUDOMONAS AERUGINOSA BACTERIOPHYTOCHROME
3NOT	C:4-117	LIGHT-INDUCED INTERMEDIATE STRUCTURE L2 OF P. AERUGINOSA BACTERIOPHYTOCHROME
3NOU	C:4-117	LIGHT-INDUCED INTERMEDIATE STRUCTURE L3 OF P. AERUGINOSA BACTERIOPHYTOCHROME

Protein domain: Phytochrome-like protein Cph1 (1)

Synechocystis sp. PCC 6803 [TaxId: 1148] (1)

2VEA

A:4-130

THE COMPLETE SENSORY MODULE OF THE CYANOBACTERIAL PHYTOCHROME CPH1 IN THE PR-STATE.

Protein domain: Sensor protein PhyB2 (1)

Rhodopseudomonas palustris [TaxId: 1076] (1)

2OOL

A:26-139; B:27-138

CRYSTAL STRUCTURE OF THE CHROMOPHORE-BINDING DOMAIN OF AN UNUSUAL BACTERIOPHYTOCHROME RPBPHP3 FROM R. PALUSTRIS

Family: Flavin-binding PAS domain (17)

Protein domain: automated matches (11)

Human (Homo sapiens) [TaxId: 9606] (5)

2L0W	A:	SOLUTION NMR STRUCTURE OF THE N-TERMINAL PAS DOMAIN OF HERG POTASSIUM CHANNEL
2L1M	A:	SOLUTION STRUCTURE OF THE EAG DOMAIN OF THE HERG (KV11.1) K+ CHANNEL
2L4R	A:	NMR SOLUTION STRUCTURE OF THE N-TERMINAL PAS DOMAIN OF HERG
4HP9	A:	CRYSTAL STRUCTURE OF THE N-TERMINAL TRUNCATED PAS DOMAIN FROM THE HERG POTASSIUM CHANNEL
4HQA	A:	CRYSTAL STRUCTURE OF PAS DOMAIN FROM THE HUMAN ERG (HERG) POTASSIUM CHANNEL

Thale cress (Arabidopsis thaliana) [TaxId: 3702] (6)

2Z6D	A:; B:	CRYSTAL STRUCTURE OF LOV1 DOMAIN OF PHOTOTROPIN2 FROM ARABIDOPSIS THALIANA
4EEP	A:	CRYSTAL STRUCTURE OF LOV2 DOMAIN OF ARABIDOPSIS THALIANA PHOTOTROPIN 2
4EER	A:	CRYSTAL STRUCTURE OF LOV2 DOMAIN OF ARABIDOPSIS THALIANA PHOTOTROPIN 2 C426A MUTANT
4EES	A:	CRYSTAL STRUCTURE OF ILOV
4EET	B:; D:	CRYSTAL STRUCTURE OF ILOV
4EEU	A:	CRYSTAL STRUCTURE OF PHILOV2.1

Protein domain: Erg potassium channel, N-terminal domain (1)

Human (Homo sapiens) [TaxId: 9606] (1)

1BYW

STRUCTURE OF THE N-TERMINAL DOMAIN OF THE HUMAN-ERG POTASSIUM CHANNEL

Protein domain: Photoreceptor phy3 flavin-binding domain, lov2 (2)

Maidenhair fern (Adiantum capillus-veneris) [TaxId: 13818] (2)

1G28	A:; B:; C:; D:	STRUCTURE OF A FLAVIN-BINDING DOMAIN, LOV2, FROM THE CHIMERIC PHYTOCHROME/PHOTOTROPIN PHOTORECEPTOR PHY3
1JNU	A:; B:; C:; D:	PHOTOEXCITED STRUCTURE OF THE PLANT PHOTORECEPTOR DOMAIN, PHY3 LOV2

Protein domain: Putative blue light receptor, phot-lov1 domain (3)

Green alga (Chlamydomonas reinhardtii) [TaxId: 3055] (3)

1N9L	A:	CRYSTAL STRUCTURE OF THE PHOT-LOV1 DOMAIN FROM CHLAMYDOMONAS REINHARDTII IN THE DARK STATE.
1N9N	A:	CRYSTAL STRUCTURE OF THE PHOT-LOV1 DOMAIN FROM CHLAMYDOMONAS REINHARDTII IN ILLUMINATED STATE. DATA SET OF A SINGLE CRYSTAL.
1N9O	A:	CRYSTAL STRUCTURE OF THE PHOT-LOV1 DOMAIN FROM CHLAMYDOMONAS REINHARDTII IN ILLUMINATED STATE. COMPOSITE DATA SET.

Family: Heme-binding PAS domain (26)

Protein domain: automated matches (1)

Bradyrhizobium japonicum [TaxId: 375] (1)

2CMN

A PROXIMAL ARGININE RESIDUE IN THE SWITCHING MECHANISM OF THE FIXL OXYGEN SENSOR

Protein domain: Direct oxygen sensor protein, DOS (5)

Escherichia coli [TaxId: 562] (5)

1S66	L:; U:	CRYSTAL STRUCTURE OF HEME DOMAIN OF DIRECT OXYGEN SENSOR FROM E. COLI
1S67	L:; U:	CRYSTAL STRUCTURE OF HEME DOMAIN OF DIRECT OXYGEN SENSOR FROM E. COLI
1V9Y	A:; B:	CRYSTAL STRUCTURE OF THE HEME PAS SENSOR DOMAIN OF EC DOS (FERRIC FORM)
1V9Z	A:; B:	CRYSTAL STRUCTURE OF THE HEME PAS SENSOR DOMAIN OF EC DOS (FERROUS FORM)
1VB6	A:; B:	CRYSTAL STRUCTURE OF THE HEME PAS SENSOR DOMAIN OF EC DOS (OXYGEN-BOUND FORM)

Protein domain: Histidine kinase FixL heme domain (20)

Bradyrhizobium japonicum [TaxId: 375] (18)

1DP6	A:	OXYGEN-BINDING COMPLEX OF FIXL HEME DOMAIN
1DP8	A:	CRYSTAL STRUCTURE OF THE NITRIC OXIDE BOUND FIXL HEME DOMAIN
1DP9	A:	CRYSTAL STRUCTURE OF IMIDAZOLE-BOUND FIXL HEME DOMAIN
1DRM	A:	CRYSTAL STRUCTURE OF THE LIGAND FREE BJFIXL HEME DOMAIN
1LSV	A:	CRYSTAL STRUCTURE OF THE CO-BOUND BJFIXL HEME DOMAIN
1LSW	A:	CRYSTAL STRUCTURE OF THE FERROUS BJFIXL HEME DOMAIN
1LSX	A:	CRYSTAL STRUCTURE OF THE METHYLIMIDAZOLE-BOUND BJFIXL HEME DOMAIN
1LT0	A:	CRYSTAL STRUCTURE OF THE CN-BOUND BJFIXL HEME DOMAIN
1XJ2	A:	CO-BOUND STRUCTURE OF BJFIXLH
1XJ3	A:	BJFIXLH IN UNLIGANDED FERROUS FORM
1XJ4	A:; B:	CO-BOUND STRUCTURE OF BJFIXLH
1XJ6	A:; B:	STRUCTURE OF BJFIXLH IN THE UNLIGANDED FERROUS FORM
1Y28	A:	CRYSTAL STRUCTURE OF THE R220A METBJFIXL HEME DOMAIN
2OWH	A:	STRUCTURE OF AN EARLY-MICROSECOND PHOTOLYZED STATE OF CO-BJFIXLH
2OWJ	A:	STRUCTURE OF AN EARLY-MICROSECOND PHOTOLYZED STATE OF CO-BJFIXLH, DARK STATE
2VV6	A:; B:; C:; D:	BJFIXLH IN FERRIC FORM
2VV7	A:; C:; D:; B:	BJFIXLH IN UNLIGANDED FERROUS FORM
2VV8	A:; B:; C:; D:	CO-BOUND STRUCTURE OF BJFIXLH

Rhizobium meliloti [TaxId: 382] (2)

1D06	A:	STRUCTURAL BASIS OF DIMERIZATION AND SENSORY MECHANISMS OF OXYGEN-SENSING DOMAIN OF RHIZOBIUM MELILOTI FIXL DETERMINED AT 1.4A RESOLUTION
1EW0	A:	CRYSTAL STRUCTURE ANALYSIS OF THE SENSOR DOMAIN OF RMFIXL(FERROUS FORM)

Family: Hypoxia-inducible factor Hif2a, C-terminal domain (10)

Protein domain: automated matches (9)

Human (Homo sapiens) [TaxId: 9606] (9)

2A24	A:	HADDOCK STRUCTURE OF HIF-2A/ARNT PAS-B HETERODIMER
3F1N	A:	CRYSTAL STRUCTURE OF A HIGH AFFINITY HETERODIMER OF HIF2 ALPHA AND ARNT C-TERMINAL PAS DOMAINS, WITH INTERNALLY BOUND ETHYLENE GLYCOL.
3F1O	A:	CRYSTAL STRUCTURE OF THE HIGH AFFINITY HETERODIMER OF HIF2 ALPHA AND ARNT C-TERMINAL PAS DOMAINS, WITH AN INTERNALLY-BOUND ARTIFICIAL LIGAND
3F1P	A:	CRYSTAL STRUCTURE OF A HIGH AFFINITY HETERODIMER OF HIF2 ALPHA AND ARNT C-TERMINAL PAS DOMAINS
3H7W	A:	CRYSTAL STRUCTURE OF THE HIGH AFFINITY HETERODIMER OF HIF2 ALPHA AND ARNT C-TERMINAL PAS DOMAINS WITH THE ARTIFICIAL LIGAND THS017
3H82	A:	CRYSTAL STRUCTURE OF THE HIGH AFFINITY HETERODIMER OF HIF2 ALPHA AND ARNT C-TERMINAL PAS DOMAINS WITH THE ARTIFICIAL LIGAND THS020
4GHI	A:	CRYSTAL STRUCTURE OF THE HIGH AFFINITY HETERODIMER OF HIF2 ALPHA AND ARNT C-TERMINAL PAS DOMAINS IN COMPLEX WITH A BENZOXADIAZOLE ANTAGONIST
4GS9	A:	CRYSTAL STRUCTURE OF THE HIGH AFFINITY HETERODIMER OF HIF2 ALPHA AND ARNT C-TERMINAL PAS DOMAINS IN COMPLEX WITH AN INACTIVE BENZOXADIAZOLE ANTAGONIST
4H6J	A:	IDENTIFICATION OF CYS 255 IN HIF-1 AS A NOVEL SITE FOR DEVELOPMENT OF COVALENT INHIBITORS OF HIF-1 /ARNT PASB DOMAIN PROTEIN-PROTEIN INTERACTION.

Protein domain: Hypoxia-inducible factor Hif2a, C-terminal domain (1)

Human (Homo sapiens) [TaxId: 9606] (1)

1P97

NMR STRUCTURE OF THE C-TERMINAL PAS DOMAIN OF HIF2A

Family: N-terminal PAS domain of Pas kinase (1)

Protein domain: N-terminal PAS domain of Pas kinase (1)

Human (Homo sapiens) [TaxId: 9606] (1)

1LL8

STRUCTURE AND INTERACTIONS OF PAS KINASE N-TERMINAL PAS DOMAIN: MODEL FOR INTRAMOLECULAR KINASE REGULATION

Family: PAS domain of steroid receptor coactivator 1A, NCo-A1 (1)

Protein domain: PAS domain of steroid receptor coactivator 1A, NCo-A1 (1)

Mouse (Mus musculus) [TaxId: 10090] (1)

1OJ5

CRYSTAL STRUCTURE OF THE NCO-A1 PAS-B DOMAIN BOUND TO THE STAT6 TRANSACTIVATION DOMAIN LXXLL MOTIF

Family: PYP-like (63)

Protein domain: automated matches (2)

Halorhodospira halophila [TaxId: 1053] (2)

1XFN	A:	NMR STRUCTURE OF THE GROUND STATE OF THE PHOTOACTIVE YELLOW PROTEIN LACKING THE N-TERMINAL PART
1XFQ	A:	STRUCTURE OF THE BLUE SHIFTED INTERMEDIATE STATE OF THE PHOTOACTIVE YELLOW PROTEIN LACKING THE N-TERMINAL PART

Protein domain: Photoactive yellow protein, PYP (60)

Methylophilus methylotrophus, strain w3a1 [TaxId: 17] (60)

1D7E	A:	CRYSTAL STRUCTURE OF THE P65 CRYSTAL FORM OF PHOTOACTIVE YELLOW PROTEIN
1F98	A:	CRYSTAL STRUCTURE OF THE PHOTOACTIVE YELLOW PROTEIN MUTANT T50V
1F9I	A:	CRYSTAL STRUCTURE OF THE PHOTOACTIVE YELLOW PROTEIN MUTANT Y42F
1GSV	A:	CRYSTAL STRUCTURE OF THE P65 CRYSTAL FORM OF PHOTOACTIVE YELLOW PROTEIN G47S MUTANT
1GSW	A:	CRYSTAL STRUCTURE OF THE P65 CRYSTAL FORM OF PHOTOACTIVE YELLOW PROTEIN G51S MUTANT
1GSX	A:	CRYSTAL STRUCTURE OF THE P65 CRYSTAL FORM OF PHOTOACTIVE YELLOW PROTEIN G47S/G51S MUTANT
1KOU	A:	CRYSTAL STRUCTURE OF THE PHOTOACTIVE YELLOW PROTEIN RECONSTITUTED WITH CAFFEIC ACID AT 1.16 A RESOLUTION
1NWZ	A:	PYP ULTRA-HIGH RESOLUTION STRUCTURE OF A BACTERIAL PHOTORECEPTOR
1ODV	A:; B:	PHOTOACTIVE YELLOW PROTEIN 1-25 DELETION MUTANT
1OT6	A:	CRYOTRAPPED CRYSTAL STRUCTURE OF THE E46Q MUTANT OF PHOTOACTIVE YELLOW PROTEIN UNDER CONTINUOUS ILLUMINATION AT 110K
1OT9	A:	CRYOTRAPPED STATE IN WILD TYPE PHOTOACTIVE YELLOW PROTEIN, INDUCED WITH CONTINUOUS ILLUMINATION AT 110K
1OTA	A:	E46Q MUTANT OF PHOTOACTIVE YELLOW PROTEIN, P63 AT 295K
1OTB	A:	WILD TYPE PHOTOACTIVE YELLOW PROTEIN, P63 AT 295K
1OTD	A:; B:	STRONG HYDROGEN BONDS IN PHOTOACTIVE YELLOW PROTEIN AND THEIR ROLE IN ITS PHOTOCYCLE
1OTE	A:	E46Q MUTANT OF PHOTOACTIVE YELLOW PROTEIN, P65 AT 110K
1OTI	A:	E46Q MUTANT OF PHOTOACTIVE YELLOW PROTEIN, P65 AT 295K
1S1Y	A:	PHOTOACTIVATED CHROMOPHORE CONFORMATION IN PHOTOACTIVE YELLOW PROTEIN (E46Q MUTANT) FROM 10 MICROSECONDS TO 3 MILLISECONDS
1S1Z	A:	PHOTOACTIVATED CHROMOPHORE CONFORMATION IN PHOTOACTIVE YELLOW PROTEIN (E46Q MUTANT) FROM 10 TO 500 NANOSECONDS
1S4R	A:	STRUCTURE OF A REACTION INTERMEDIATE IN THE PHOTOCYCLE OF PYP EXTRACTED BY A SVD-DRIVEN ANALYSIS
1S4S	A:	REACTION INTERMEDIATE IN THE PHOTOCYCLE OF PYP, INTERMEDIATE OCCUPIED BETWEEN 100 MICRO-SECONDS TO 5 MILLI-SECONDS
1T18	A:	EARLY INTERMEDIATE IE1 FROM TIME-RESOLVED CRYSTALLOGRAPHY OF THE E46Q MUTANT OF PYP
1T19	A:	EARLY INTERMEDIATE IE2 FROM TIME-RESOLVED CRYSTALLOGRAPHY OF THE E46Q MUTANT OF PYP
1T1A	A:	LATE INTERMEDIATE IL1 FROM TIME-RESOLVED CRYSTALLOGRAPHY OF THE E46Q MUTANT OF PYP
1T1B	A:	LATE INTERMEDIATE IL2 FROM TIME-RESOLVED CRYSTALLOGRAPHY OF THE E46Q MUTANT OF PYP
1T1C	A:	LATE INTERMEDIATE IL3 FROM TIME-RESOLVED CRYSTALLOGRAPHY OF THE E46Q MUTANT OF PYP
1TS0	A:	STRUCTURE OF THE PB1 INTERMEDIATE FROM TIME-RESOLVED LAUE CRYSTALLOGRAPHY
1TS6	A:	STRUCTURE OF THE PB2 INTERMEDIATE FROM TIME-RESOLVED LAUE CRYSTALLOGRAPHY
1TS7	A:	STRUCTURE OF THE PR CIS WOBBLE AND PR E46Q INTERMEDIATES FROM TIME-RESOLVED LAUE CRYSTALLOGRAPHY
1TS8	A:	STRUCTURE OF THE PR CIS PLANAR INTERMEDIATE FROM TIME-RESOLVED LAUE CRYSTALLOGRAPHY
1UGU	A:	CRYSTAL STRUCTURE OF PYP E46Q MUTANT
1UWN	X:	THE INITIAL EVENTS IN THE PHOTOCYCLE OF PHOTOACTIVE YELLOW PROTEIN: A COMMON MECHANISM ON LIGHT ACTIVATION IN PHOTORECEPTOR PROTEINS
1UWP	X:	INITIAL EVENTS IN THE PHOTOCYCLE OF PHOTOACTIVE YELLOW PROTEIN
2D01	A:	WILD TYPE PHOTOACTIVE YELLOW PROTEIN, P65 FORM
2D02	A:	R52Q MUTANT OF PHOTOACTIVE YELLOW PROTEIN, P65 FORM
2I9V	A:	STRUCTURAL ROLE OF Y98 IN PYP: EFFECTS ON FLUORESCENCE, GATEWAY AND PHOTOCYCLE RECOVERY
2KX6	A:	SIGNALING STATE OF PHOTOACTIVE YELLOW PROTEIN
2PHY	A:	PHOTOACTIVE YELLOW PROTEIN, DARK STATE (UNBLEACHED)
2PYP	A:	PHOTOACTIVE YELLOW PROTEIN, PHOTOSTATIONARY STATE, 50% GROUND STATE, 50% BLEACHED
2PYR	A:	PHOTOACTIVE YELLOW PROTEIN, 1 NANOSECOND INTERMEDIATE (287K)
2QJ5	A:	PYP ULTRA-HIGH RESOLUTION OF A BACTERIAL PHOTORECEPTOR
2QJ7	A:	PYP ULTRA-HIGH RESOLUTION OF A BACTERIAL PHOTORECEPTOR
2QWS	A:	NEUTRON AND X-RAY STRUCTURAL STUDIES OF SHORT HYDROGEN BONDS IN PHOTOACTIVE YELLOW PROTEIN (PYP)
2ZOH	A:	X-RAY CRYSTAL STRUCTURE OF PHOTOACTIVE YELLOW PROTEIN, WILD TYPE, AT 295K
2ZOI	A:	NEUTRON CRYSTAL STRUCTURE OF PHOTOACTIVE YELLOW PROTEIN, WILD TYPE, AT 295K
3PHY	A:	PHOTOACTIVE YELLOW PROTEIN, DARK STATE (UNBLEACHED), SOLUTION STRUCTURE, NMR, 26 STRUCTURES
3PYP	A:	PHOTOACTIVE YELLOW PROTEIN, CRYOTRAPPED EARLY LIGHT CYCLE INTERMEDIATE
3UMD	A:	STRUCTURE OF PB INTERMEDIATE OF PHOTOACTIVE YELLOW PROTEIN (PYP) AT PH 4.
3UME	A:	STRUCTURE OF PB INTERMEDIATE OF PHOTOACTIVE YELLOW PROTEIN (PYP) AT PH 7
3VE3	A:	STRUCTURE OF IT INTERMEDIATE FROM TIME-RESOLVED LAUE CRYSTALLOGRAPHY
3VE4	A:	STRUCTURES OF ICT AND PR1 INTERMEDIATES FROM TIME-RESOLVED LAUE CRYSTALLOGRAPHY
4B9O	A:	THE PR0 PHOTOCYCLE INTERMEDIATE OF PHOTOACTIVE YELLOW PROTEIN
4BBT	A:	THE PR1 PHOTOCYCLE INTERMEDIATE OF PHOTOACTIVE YELLOW PROTEIN
4BBU	A:	THE PR2 PHOTOCYCLE INTERMEDIATE OF PHOTOACTIVE YELLOW PROTEIN
4BBV	A:	THE PB0 PHOTOCYCLE INTERMEDIATE OF PHOTOACTIVE YELLOW PROTEIN
4HY8	A:	STRUCTURES OF PR1 AND PR2 INTERMEDIATES FROM TIME-RESOLVED LAUE CRYSTALLOGRAPHY
4I38	A:	STRUCTURES OF IT INTERMEDIATES FROM TIME-RESOLVED LAUE CRYSTALLOGRAPHY COLLECTED AT 14ID-B, APS
4I39	A:	STRUCTURES OF ICT AND PR1 INTERMEDIATES FROM TIME-RESOLVED LAUE CRYSTALLOGRAPHY COLLECTED AT 14ID-B, APS
4I3A	A:	STRUCTURES OF PR1 AND PR2 INTERMEDIATES FROM TIME-RESOLVED LAUE CRYSTALLOGRAPHY COLLECTED AT 14ID-B, APS
4I3I	A:	STRUCTURES OF IT INTERMEDIATE OF PHOTOACTIVE YELLOW PRTEIN E46Q MUNTANT FROM TIME-RESOLVED LAUE CRYSTALLOGRAPHY COLLECTED AT 14ID APS
4I3J	A:	STRUCTURES OF PR1 INTERMEDIATE OF PHOTOACTIVE YELLOW PRTEIN E46Q MUNTANT FROM TIME-RESOLVED LAUE CRYSTALLOGRAPHY COLLECTED AT 14ID APS

Protein domain: PYP domain of sensor histidine kinase Ppr (1)

Rhodospirillum centenum [TaxId: 34018] (1)

1MZU

A:; B:; C:

CRYSTAL STRUCTURE OF THE PHOTOACTIVE YELLOW PROTEIN DOMAIN FROM THE SENSOR HISTIDINE KINASE PPR FROM RHODOSPIRILLUM CENTENUM

Superfamily: Roadblock/LC7 domain (20)

Family: Roadblock/LC7 domain (20)

Protein domain: automated matches (6)

Fruit fly (Drosophila melanogaster) [TaxId: 7227] (2)

3L7H	A:; B:; C:; D:	INSIGHTS INTO DYNEIN ASSEMBLY FROM A DYNEIN INTERMEDIATE CHAIN LIGHT CHAIN ROADBLOCK STRUCTURE
3L9K	A:; B:; C:; D:	INSIGHTS INTO DYNEIN ASSEMBLY FROM A DYNEIN INTERMEDIATE CHAIN-LIGHT CHAIN ROADBLOCK STRUCTURE

Human (Homo sapiens) [TaxId: 9606] (3)

2B95	B:	SOLUTION NMR STRUCTURE OF PROTEIN DYNEIN LIGHT CHAIN 2A, CYTOPLASMIC; NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET HR2106
2E8J	A:; B:	SOLUTION STRUCTURE OF DYNEIN LIGHT CHAIN 2A
2HZ5	A:; B:	CRYSTAL STRUCTURE OF HUMAN DYNEIN LIGHT CHAIN DNLC2A

Mouse (Mus musculus) [TaxId: 10090] (1)

1SZV

STRUCTURE OF THE ADAPTOR PROTEIN P14 REVEALS A PROFILIN-LIKE FOLD WITH NOVEL FUNCTION

Protein domain: Dynein light chain 2A, cytoplasmic (3)

Human (Homo sapiens) [TaxId: 9606] (2)

1Z09	A:; B:	SOLUTION STRUCTURE OF KM23
2B95	A:11-106	SOLUTION NMR STRUCTURE OF PROTEIN DYNEIN LIGHT CHAIN 2A, CYTOPLASMIC; NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET HR2106

Mouse (Mus musculus) [TaxId: 10090] (1)

1Y4O

A:10-104; B:

SOLUTION STRUCTURE OF A MOUSE CYTOPLASMIC ROADBLOCK/LC7 DYNEIN LIGHT CHAIN

Protein domain: Giding protein MglB (1)

Thermus thermophilus [TaxId: 274] (1)

1J3W

A:; B:; C:; D:

STRUCTURE OF GLIDING PROTEIN-MGLB FROM THERMUS THERMOPHILUS HB8

Protein domain: Late endosomal/lysosomal Mp1 interacting protein p14 (5)

Mouse (Mus musculus) [TaxId: 10090] (5)

1SKO	B:	MP1-P14 COMPLEX
1VET	B:	CRYSTAL STRUCTURE OF P14/MP1 AT 1.9 A RESOLUTION
1VEU	B:	CRYSTAL STRUCTURE OF THE P14/MP1 COMPLEX AT 2.15 A RESOLUTION
2ZL1	B:	MP1-P14 SCAFFOLDING COMPLEX
3CPT	B:	MP1-P14 SCAFFOLDING COMPLEX

Protein domain: MEK binding partner 1, MP1 (5)

Human (Homo sapiens) [TaxId: 9606] (3)

1SKO	A:	MP1-P14 COMPLEX
2ZL1	A:	MP1-P14 SCAFFOLDING COMPLEX
3CPT	A:	MP1-P14 SCAFFOLDING COMPLEX

Mouse (Mus musculus) [TaxId: 10090] (2)

1VET	A:	CRYSTAL STRUCTURE OF P14/MP1 AT 1.9 A RESOLUTION
1VEU	A:	CRYSTAL STRUCTURE OF THE P14/MP1 COMPLEX AT 2.15 A RESOLUTION

Superfamily: Sensory domain-like (15)

Family: LuxQ-periplasmic domain-like (5)

Protein domain: Autoinducer 2 sensor kinase/phosphatase LuxQ (5)

Vibrio cholerae (1)

3C30

CRYSTAL STRUCTURE OF THE VIBRIO CHOLERAE LUXQ PERIPLASMIC DOMAIN (SEMET)

Vibrio cholerae [TaxId: 666] (1)

3C38

CRYSTAL STRUCTURE OF THE PERIPLASMIC DOMAIN OF VIBRIO CHOLERAE LUXQ

Vibrio harveyi [TaxId: 669] (3)

1ZHH	B:51-271	CRYSTAL STRUCTURE OF THE APO FORM OF VIBRIO HARVEYI LUXP COMPLEXED WITH THE PERIPLASMIC DOMAIN OF LUXQ
2HJ9	C:52-270; D:	CRYSTAL STRUCTURE OF THE AUTOINDUCER-2-BOUND FORM OF VIBRIO HARVEYI LUXP COMPLEXED WITH THE PERIPLASMIC DOMAIN OF LUXQ
2HJE	A:	CRYSTAL STRUCTURE OF VIBRIO HARVEYI LUXQ PERIPLASMIC DOMAIN

Family: Sensory domain of two-component sensor kinase (5)

Protein domain: automated matches (3)

Escherichia coli [TaxId: 562] (1)

3BY8

CRYSTAL STRUCTURE OF THE E.COLI DCUS SENSOR DOMAIN

Klebsiella pneumoniae [TaxId: 573] (2)

2J80	A:; B:	STRUCTURE OF CITRATE-BOUND PERIPLASMIC DOMAIN OF SENSOR HISTIDINE KINASE CITA
2V9A	A:; B:	STRUCTURE OF CITRATE-FREE PERIPLASMIC DOMAIN OF SENSOR HISTIDINE KINASE CITA

Protein domain: Fumarate sensor DcuS (1)

Escherichia coli [TaxId: 562] (1)

1OJG

SENSORY DOMAIN OF THE MEMBRANEOUS TWO-COMPONENT FUMARATE SENSOR DCUS OF E. COLI

Protein domain: Sensor kinase CitA (1)

Klebsiella pneumoniae [TaxId: 573] (1)

1P0Z

A:; B:; C:; D:; E:; F:; G:; H:; I:; J:

SENSOR KINASE CITA BINDING DOMAIN

Family: YkuI C-terminal domain-like (5)

Protein domain: GGDEF family protein VP0354 (3)

Vibrio parahaemolyticus [TaxId: 670] (3)

2P7J	A:181-273; A:9-180; B:181-281; B:8-180	CRYSTAL STRUCTURE OF THE DOMAIN OF PUTATIVE SENSORY BOX/GGDEF FAMILY PROTEIN FROM VIBRIO PARAHAEMOLYTICUS
3LID	A:33-206; A:207-311; B:36-206; B:207-311	CRYSTAL STRUCTURE OF THE EXTRACELLULAR DOMAIN OF THE PUTATIVE HISTIDINE KINASE VPHK1S-Z8
3LIE	A:30-206; B:33-206; B:207-300; A:207-302	CRYSTAL STRUCTURE OF THE EXTRACELLULAR DOMAIN OF THE PUTATIVE HISTIDINE KINASE VPHK1S-Z8

Protein domain: Hypothetical protein YkuI, C-terminal domain (2)

Bacillus subtilis [TaxId: 1423] (2)

2BAS	A:263-407; B:263-400	CRYSTAL STRUCTURE OF THE BACILLUS SUBTILIS YKUI PROTEIN, WITH AN EAL DOMAIN.
2W27	A:263-407; B:263-399	CRYSTAL STRUCTURE OF THE BACILLUS SUBTILIS YKUI PROTEIN, WITH AN EAL DOMAIN, IN COMPLEX WITH SUBSTRATE C-DI-GMP AND CALCIUM

Superfamily: SNARE-like (13)

Family: Clathrin coat assembly domain (4)

Protein domain: Mu2 adaptin (clathrin coat assembly protein AP50) (1)

Norway rat (Rattus norvegicus) [TaxId: 10116] (1)

2VGL

M:1-141

AP2 CLATHRIN ADAPTOR CORE

Protein domain: Sigma2 adaptin (clathrin coat assembly protein AP17) (3)

Mouse (Mus musculus) [TaxId: 10090] (3)

2JKR	I:; S:	AP2 CLATHRIN ADAPTOR CORE WITH DILEUCINE PEPTIDE RM( PHOSPHOS)QIKRLLSE
2VGL	S:	AP2 CLATHRIN ADAPTOR CORE
4NEE	D:; F:; I:; L:	CRYSTAL STRUCTURE OF AP-2 ALPHA/SIMGA2 COMPLEX BOUND TO HIV-1 NEF

Family: Sedlin (SEDL) (2)

Protein domain: Sedlin (SEDL) (2)

Mouse (Mus musculus) [TaxId: 10090] (2)

1H3Q	A:	CRYSTAL STURCTURE OF SEDL AT 2.4 ANGSTROMS RESOLUTION
2J3W	A:; C:	THE CRYSTAL STRUCTURE OF THE BET3-TRS31-SEDLIN COMPLEX.

Family: SRP alpha N-terminal domain-like (3)

Protein domain: Signal recognition particle receptor alpha subunit, N-terminal domain (2)

Human (Homo sapiens) [TaxId: 9606] (2)

2FH5	A:1-129	THE STRUCTURE OF THE MAMMALIAN SRP RECEPTOR
2GO5	1:1-129	STRUCTURE OF SIGNAL RECOGNITION PARTICLE RECEPTOR (SR) IN COMPLEX WITH SIGNAL RECOGNITION PARTICLE (SRP) AND RIBOSOME NASCENT CHAIN COMPLEX

Protein domain: Srx domain of the signal recognition particle receptor alpha-subunit (1)

Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (1)

1NRJ

SIGNAL RECOGNITION PARTICLE RECEPTOR BETA-SUBUNIT IN COMPLEX WITH THE SRX DOMAIN FROM THE ALPHA-SUBUNIT

Family: Synatpobrevin N-terminal domain (4)

Protein domain: automated matches (1)

Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (1)

3BW6

CRYSTAL STRUCTURE OF THE LONGIN DOMAIN OF YEAST YKT6

Protein domain: Sec22b (1)

Mouse (Mus musculus) [TaxId: 10090] (1)

1IFQ

A:; B:

SEC22B N-TERMINAL DOMAIN

Protein domain: Synaptobrevin homolog 1 ykt6 (2)

Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (2)

1H8M	A:	SOLUTION STRUCTURE OF YKT6
1IOU	A:	SOLUTION STRUCTURE OF YKT6P (1-140)

Superfamily: YeeU-like (4)

Family: YagB/YeeU/YfjZ-like (4)

Protein domain: Hypothetical protein YeeU (2)

Escherichia coli [TaxId: 562] (1)

2H28

A:16-122; B:

CRYSTAL STRUCTURE OF YEEU FROM E. COLI. NORTHEAST STRUCTURAL GENOMICS TARGET ER304

Shigella flexneri [TaxId: 623] (1)

2INW

A:4-120; B:

CRYSTAL STRUCTURE OF Q83JN9 FROM SHIGELLA FLEXNERI AT HIGH RESOLUTION. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET SFR137.

Protein domain: Hypothetical protein YfjZ (2)

Escherichia coli [TaxId: 562] (2)

2EA9	A:	CRYSTAL STRUCTURE OF A HYPOTHETICAL PROTEIN JW2626 FROM E.COLI
2JN7	A:1-105	NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET ER411

Superfamily: YNR034W-A-like (1)

Family: YNR034W-A-like (1)

Protein domain: Uncharacterized protein YNR034W-A (1)

Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (1)

2GRG

A:1-98

SOLUTION NMR STRUCTURE OF PROTEIN YNR034W-A FROM SACCHAROMYCES CEREVISIAE. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET YT727; ONTARIO CENTER FOR STRUCTURAL PROTEOMICS TARGET YST6499.