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(-) Description

Title :  STRUCTURE OF FRMSR OF STAPHYLOCOCCUS AUREUS (REDUCED FORM)
 
Authors :  S. M. Bong, Y. M. Chi
Date :  23 Nov 09  (Deposition) - 26 May 10  (Release) - 26 May 10  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.90
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Biol. Unit 3:  E,F  (1x)
Biol. Unit 4:  G,H  (1x)
Keywords :  Frmsr, Free-Met-R-So, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. M. Bong, Y. M. Chi
Structure Of Frmsr Of Staphylococcus Aureus
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - PUTATIVE UNCHARACTERIZED PROTEIN
    Chains: A, B, C, D, E, F, G, H
    EC Number: 1.8.4.14
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET28A
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: SAR1796
    Organism Scientific: STAPHYLOCOCCUS AUREUS
    Organism Taxid: 282458
    Strain: MRSA252
    Synonym: FREE-METHIONINE (R)-S-OXIDE REDUCTASE, FREE-R-METHIONINE SULFOXIDE REDUCTASE

 Structural Features

(-) Chains, Units

  12345678
Asymmetric Unit : ABCDEFGH
Biological Unit 1 (1x): AB      
Biological Unit 2 (1x):   CD    
Biological Unit 3 (1x):     EF  
Biological Unit 4 (1x):       GH

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric Unit (1, 1)
No.NameCountTypeFull Name
1PEG1Ligand/IonDI(HYDROXYETHYL)ETHER
Biological Unit 1 (0, 0)
No.NameCountTypeFull Name
1PEG-1Ligand/IonDI(HYDROXYETHYL)ETHER
Biological Unit 2 (1, 1)
No.NameCountTypeFull Name
1PEG1Ligand/IonDI(HYDROXYETHYL)ETHER
Biological Unit 3 (0, 0)
No.NameCountTypeFull Name
1PEG-1Ligand/IonDI(HYDROXYETHYL)ETHER
Biological Unit 4 (0, 0)
No.NameCountTypeFull Name
1PEG-1Ligand/IonDI(HYDROXYETHYL)ETHER

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREALA D:67BINDING SITE FOR RESIDUE PEG D 6073

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3KSF)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3KSF)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3KSF)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3KSF)

(-) Exons   (0, 0)

(no "Exon" information available for 3KSF)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:152
                                                                                                                                                                                        
               SCOP domains d3ksfa_ A: automated matches                                                                                                                             SCOP domains
               CATH domains 3ksfA00 A:3-154  [code=3.30.450.40, no name defined]                                                                                                     CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhh....hhhhhhhhhhhhhhhhh....eeeeeeee..eeeeeeee......eee..hhhhhhhhhhh..eee.hhhhh...........eeeeeeeee..eeeeeeeeee......hhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ksf A   3 TINPTNYTLLKKQAASLIEDEHHMIAILSNMSALLNDNLDQINWVGFYLLEQNELILGPFQGHPACVHIPIGKGVCGTAVSERRTQVVADVHQFKGHIACDANSKSEIVVPIFKDDKIIGVLDIDAPITDRFDDNDKEHLEAIVKIIEKQLA 154
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152  


Chain B from PDB  Type:PROTEIN  Length:152
                                                                                                                                                                                        
               SCOP domains d3ksfb_ B: automated matches                                                                                                                             SCOP domains
               CATH domains 3ksfB00 B:3-154  [code=3.30.450.40, no name defined]                                                                                                     CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhh....hhhhhhhhhhhhhhhhh....eeeeeeee..eeeeeeee......eee..hhhhhhhhhh...eee.hhhhh...........eeeeeeeee..eeeeeeeeee......hhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ksf B   3 TINPTNYTLLKKQAASLIEDEHHMIAILSNMSALLNDNLDQINWVGFYLLEQNELILGPFQGHPACVHIPIGKGVCGTAVSERRTQVVADVHQFKGHIACDANSKSEIVVPIFKDDKIIGVLDIDAPITDRFDDNDKEHLEAIVKIIEKQLA 154
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152  


Chain C from PDB  Type:PROTEIN  Length:152
                                                                                                                                                                                        
               SCOP domains d3ksfc_ C: automated matches                                                                                                                             SCOP domains
               CATH domains 3ksfC00 C:3-154  [code=3.30.450.40, no name defined]                                                                                                     CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhh....hhhhhhhhhhhhhhh......eeeeeeee..eeeeeeee......eee..hhhhhhhhhhh..eee.hhhhh...........eeeeeeeee..eeeeeeeeee......hhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ksf C   3 TINPTNYTLLKKQAASLIEDEHHMIAILSNMSALLNDNLDQINWVGFYLLEQNELILGPFQGHPACVHIPIGKGVCGTAVSERRTQVVADVHQFKGHIACDANSKSEIVVPIFKDDKIIGVLDIDAPITDRFDDNDKEHLEAIVKIIEKQLA 154
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152  


Chain D from PDB  Type:PROTEIN  Length:154
                                                                                                                                                                                          
               SCOP domains d3ksfd_ D: automated matches                                                                                                                               SCOP domains
               CATH domains 3ksfD00 D:1-154  [code=3.30.450.40, no name defined]                                                                                                       CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhh....eeeeeeee..eeeeeeee......eee..hhhhhhhhhhh..eee.hhhhh...........eeeeeeeee..eeeeeeeeee......hhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ksf D   1 MTTINPTNYTLLKKQAASLIEDEHHMIAILSNMSALLNDNLDQINWVGFYLLEQNELILGPFQGHPACVHIPIGKGVCGTAVSERRTQVVADVHQFKGHIACDANSKSEIVVPIFKDDKIIGVLDIDAPITDRFDDNDKEHLEAIVKIIEKQLA 154
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150    


Chain E from PDB  Type:PROTEIN  Length:152
                                                                                                                                                                                        
               SCOP domains d3ksfe_ E: automated matches                                                                                                                             SCOP domains
               CATH domains 3ksfE00 E:3-154  [code=3.30.450.40, no name defined]                                                                                                     CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhh....eeeeeeee..eeeeeeee......eee..hhhhhhhhhhh..eee.hhhhh...........eeeeeeeee..eeeeeeeeee......hhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ksf E   3 TINPTNYTLLKKQAASLIEDEHHMIAILSNMSALLNDNLDQINWVGFYLLEQNELILGPFQGHPACVHIPIGKGVCGTAVSERRTQVVADVHQFKGHIACDANSKSEIVVPIFKDDKIIGVLDIDAPITDRFDDNDKEHLEAIVKIIEKQLA 154
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152  


Chain F from PDB  Type:PROTEIN  Length:152
                                                                                                                                                                                        
               SCOP domains d3ksff_ F: automated matches                                                                                                                             SCOP domains
               CATH domains 3ksfF00 F:3-154  [code=3.30.450.40, no name defined]                                                                                                     CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhh....hhhhhhhhhhhhhhhhh....eeeeeee...eeeeeeee......eee..hhhhhhhhhh...eee.hhhhh...........eeeeeeeee..eeeeeeeeee......hhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ksf F   3 TINPTNYTLLKKQAASLIEDEHHMIAILSNMSALLNDNLDQINWVGFYLLEQNELILGPFQGHPACVHIPIGKGVCGTAVSERRTQVVADVHQFKGHIACDANSKSEIVVPIFKDDKIIGVLDIDAPITDRFDDNDKEHLEAIVKIIEKQLA 154
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152  


Chain G from PDB  Type:PROTEIN  Length:152
                                                                                                                                                                                        
               SCOP domains d3ksfg_ G: automated matches                                                                                                                             SCOP domains
               CATH domains 3ksfG00 G:3-154  [code=3.30.450.40, no name defined]                                                                                                     CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhh....eeeeeeee..eeeeeeee......ee...hhhhhhhhhhh..eee.hhhhh...........eeeeeeeee..eeeeeeeeee......hhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ksf G   3 TINPTNYTLLKKQAASLIEDEHHMIAILSNMSALLNDNLDQINWVGFYLLEQNELILGPFQGHPACVHIPIGKGVCGTAVSERRTQVVADVHQFKGHIACDANSKSEIVVPIFKDDKIIGVLDIDAPITDRFDDNDKEHLEAIVKIIEKQLA 154
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152  


Chain H from PDB  Type:PROTEIN  Length:154
                                                                                                                                                                                          
               SCOP domains d3ksfh_ H: automated matches                                                                                                                               SCOP domains
               CATH domains 3ksfH00 H:1-154  [code=3.30.450.40, no name defined]                                                                                                       CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhhh....hhhhhhhhhhhhhhhhh....eeeeeee....eeeeeee......ee...hhhhhhhhhhh..eee.hhhhh...........eeeeeeeee..eeeeeeeeee......hhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ksf H   1 MTTINPTNYTLLKKQAASLIEDEHHMIAILSNMSALLNDNLDQINWVGFYLLEQNELILGPFQGHPACVHIPIGKGVCGTAVSERRTQVVADVHQFKGHIACDANSKSEIVVPIFKDDKIIGVLDIDAPITDRFDDNDKEHLEAIVKIIEKQLA 154
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 8)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (1, 8)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3KSF)

(-) Gene Ontology  (0, 0)

Asymmetric Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 3KSF)

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 Related Entries

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(-) Related Entries Specified in the PDB File

3ksg 3ksh 3ksi