Chain A from PDB Type:PROTEIN Length:323
aligned with HRCA_THEMA | Q9WZV5 from UniProtKB/Swiss-Prot Length:338
Alignment length:323
23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223 233 243 253 263 273 283 293 303 313 323 333
HRCA_THEMA 14 KLNDRQRKVLYCIVREYIENKKPVSSQRVLEVSNIEFSSATIRNDMKKLEYLGYIYQPHTSAGRIPTDKGLRFYYEEMLKISKETSEADLAVETFKSMPLADPEKVLFLAGNLLARLTEGYVLIERPNTRDLKILRVMLIPVSEDYLIFSILTEFGVSKVTPIKTQERLNWEEIERQLNFLLRGRTVGEVLMGKIESLKGSGFLRLIESLIGETVERYLDAGLENLLKDETLTLEDIRNLLEEVKDQKFLESLVGEGITVRIGREIGRKKLEKFAVFSGKYFKGESPIGSVYLFTSKVTKYDRNHRVFEYILNRLSEYFTSTS 336
SCOP domains d1stza1 A:14-100 Heat-inducible transcription repressor HrcA, N-terminal domain d1stza2 A:101-336 Heat-inducible transcription repressor HrcA, C-terminal domain SCOP domains
CATH domains 1stzA01 A:14-98 'winged helix' repressor DNA binding domain 1stzA02 A:99-140,A:230-336 1stzA03 A:141-229 Heat-inducible transcription repressor hrca homolog; domain 3 1stzA02 A:99-140,A:230-336 [code=3.30.450.40, no name defined] CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhhhhhhhhhhhhh...hhhhhhhhh....hhhhhhhhhhhhhhh..ee........eehhhhhhhhhhhhhhhh......hhhhhh.......hhhhhhhhhhhhhhhhhh.eeeee..hhhhh...eeeeee....eeeeeeee..eeeeeeeee.....hhhhhhhhhhhhhh..hhhhhhhh.hhhhhhhhhhhhhhhhhh.....eeeehhhhhhhh...hhhhhhhhhhhh.hhhhhhhhh....eeee.hhhhhhhhh.eeeeeeeeee..eeeeeeeeeee...hhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1stz A 14 KLNDRQRKVLYCIVREYIENKKPVSSQRVLEVSNIEFSSATIRNDMKKLEYLGYIYQPHTSAGRIPTDKGLRFYYEEMLKISKETSEADLAVETFKSMPLADPEKVLFLAGNLLARLTEGYVLIERPNTRDLKILRVMLIPVSEDYLIFSILTEFGVSKVTPIKTQERLNWEEIERQLNFLLRGRTVGEVLMGKIESLKGSGFLRLIESLIGETVERYLDAGLENLLKDETLTLEDIRNLLEEVKDQKFLESLVGEGITVRIGREIGRKKLEKFAVFSGKYFKGESPIGSVYLFTSKVTKYDRNHRVFEYILNRLSEYFTSTS 336
23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223 233 243 253 263 273 283 293 303 313 323 333
Chain B from PDB Type:PROTEIN Length:311
aligned with HRCA_THEMA | Q9WZV5 from UniProtKB/Swiss-Prot Length:338
Alignment length:326
20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330
HRCA_THEMA 11 ALKKLNDRQRKVLYCIVREYIENKKPVSSQRVLEVSNIEFSSATIRNDMKKLEYLGYIYQPHTSAGRIPTDKGLRFYYEEMLKISKETSEADLAVETFKSMPLADPEKVLFLAGNLLARLTEGYVLIERPNTRDLKILRVMLIPVSEDYLIFSILTEFGVSKVTPIKTQERLNWEEIERQLNFLLRGRTVGEVLMGKIESLKGSGFLRLIESLIGETVERYLDAGLENLLKDETLTLEDIRNLLEEVKDQKFLESLVGEGITVRIGREIGRKKLEKFAVFSGKYFKGESPIGSVYLFTSKVTKYDRNHRVFEYILNRLSEYFTSTS 336
SCOP domains d1stzb1 B:11-95 Heat-inducible transcription repressor HrcA, N-terminal domain ---------------d1stzb2 B:111-336 Heat-inducible transcription repressor HrcA, C-terminal domain SCOP domains
CATH domains 1stzB01 B:11-95 'winged helix' repressor DNA binding domain ---------------1stzB02 B:111-140,B:230-336 1stzB03 B:141-229 Heat-inducible transcription repressor hrca homolog; domain 3 1stzB02 B:111-140,B:230-336 [code=3.30.450.40, no name defined] CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .....hhhhhhhhhhhhhhhhhhh...hhhhhhhhh....hhhhhhhhhhhhhhh..ee........eehhhhhhhhhhhhhhh.---------------....hhhhhhhhhhhhhhhhhh.eeeee..........eeeeee....eeeeeeee..eeeeeeeee.....hhhhhhhhhhhhhh..hhhhhhh..hhhhhhhhhhhhhhhhhh.....eeeehhhhhhhh...hhhhhhhhhhhh.hhhhhhhhh....eeee.hhhhhhhhh.eeeeeeeeee..eeeeeeeeeee...hhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1stz B 11 ALKKLNDRQRKVLYCIVREYIENKKPVSSQRVLEVSNIEFSSATIRNDMKKLEYLGYIYQPHTSAGRIPTDKGLRFYYEEMLKIS---------------MPLADPEKVLFLAGNLLARLTEGYVLIERPNTRDLKILRVMLIPVSEDYLIFSILTEFGVSKVTPIKTQERLNWEEIERQLNFLLRGRTVGEVLMGKIESLKGSGFLRLIESLIGETVERYLDAGLENLLKDETLTLEDIRNLLEEVKDQKFLESLVGEGITVRIGREIGRKKLEKFAVFSGKYFKGESPIGSVYLFTSKVTKYDRNHRVFEYILNRLSEYFTSTS 336
20 30 40 50 60 70 80 90 | - -| 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330
95 111
Chain C from PDB Type:PROTEIN Length:311
aligned with HRCA_THEMA | Q9WZV5 from UniProtKB/Swiss-Prot Length:338
Alignment length:326
20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330
HRCA_THEMA 11 ALKKLNDRQRKVLYCIVREYIENKKPVSSQRVLEVSNIEFSSATIRNDMKKLEYLGYIYQPHTSAGRIPTDKGLRFYYEEMLKISKETSEADLAVETFKSMPLADPEKVLFLAGNLLARLTEGYVLIERPNTRDLKILRVMLIPVSEDYLIFSILTEFGVSKVTPIKTQERLNWEEIERQLNFLLRGRTVGEVLMGKIESLKGSGFLRLIESLIGETVERYLDAGLENLLKDETLTLEDIRNLLEEVKDQKFLESLVGEGITVRIGREIGRKKLEKFAVFSGKYFKGESPIGSVYLFTSKVTKYDRNHRVFEYILNRLSEYFTSTS 336
SCOP domains d1stzc1 C:11-95 Heat-inducible transcription repressor HrcA, N-terminal domain ---------------d1stzc2 C:111-336 Heat-inducible transcription repressor HrcA, C-terminal domain SCOP domains
CATH domains 1stzC01 C:11-95 'winged helix' repressor DNA binding domain ---------------1stzC02 C:111-140,C:230-336 1stzC03 C:141-229 Heat-inducible transcription repressor hrca homolog; domain 3 1stzC02 C:111-140,C:230-336 [code=3.30.450.40, no name defined] CATH domains
Pfam domains (1) ----------------------------------------------------------------------------------------------------------HrcA-1stzC01 C:117-317 ------------------- Pfam domains (1)
Pfam domains (2) ----------------------------------------------------------------------------------------------------------HrcA-1stzC02 C:117-317 ------------------- Pfam domains (2)
Pfam domains (3) ----------------------------------------------------------------------------------------------------------HrcA-1stzC03 C:117-317 ------------------- Pfam domains (3)
Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhh....hhhhhhhhhhhhhhh..ee........eehhhhhhhhhhhhhhhh---------------....hhhhhhhhhhhhhhhhhh.eeeee..........eeeeee....eeeeeeee..eeeeeeeee.....hhhhhhhhhhhhhh..hhhhhhh........hhhhhhhhhhhh.....eeeehhhhhhh....hhhhhhhhhhhh.hhhhhhhh.....eeee.hhhhhhhhh.eeeeeeeeee..eeeeeeeeeee...hhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1stz C 11 ALKKLNDRQRKVLYCIVREYIENKKPVSSQRVLEVSNIEFSSATIRNDMKKLEYLGYIYQPHTSAGRIPTDKGLRFYYEEMLKIS---------------MPLADPEKVLFLAGNLLARLTEGYVLIERPNTRDLKILRVMLIPVSEDYLIFSILTEFGVSKVTPIKTQERLNWEEIERQLNFLLRGRTVGEVLMGKIESLKGSGFLRLIESLIGETVERYLDAGLENLLKDETLTLEDIRNLLEEVKDQKFLESLVGEGITVRIGREIGRKKLEKFAVFSGKYFKGESPIGSVYLFTSKVTKYDRNHRVFEYILNRLSEYFTSTS 336
20 30 40 50 60 70 80 90 | - -| 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330
95 111
Legend: |
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→ Mismatch |
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(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |