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3O62
Asym. Unit
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Asym.Unit (529 KB)
Biol.Unit 1 (521 KB)
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(1)
Title
:
NUCLEOSOME CORE PARTICLE MODIFIED WITH A CISPLATIN 1,3-CIS-{PT(NH3) 2}2+-D(GPTPG) INTRASTRAND CROSS-LINK
Authors
:
S. J. Lippard, R. C. Todd
Date
:
28 Jul 10 (Deposition) - 05 Jan 11 (Release) - 05 Jan 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.22
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J
Biol. Unit 1: A,B,C,D,E,F,G,H,I,J (1x)
Keywords
:
Nucleosome, Cisplatin, Structural Protein-Dna Complex
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Reference
:
R. C. Todd, S. J. Lippard
Consequences Of Cisplatin Binding On Nucleosome Structure And Dynamics.
Chem. Biol. V. 17 1334 2010
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Hetero Components
(1, 1)
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1a: CISPLATIN (CPTa)
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No.
Name
Count
Type
Full Name
1
CPT
1
Ligand/Ion
CISPLATIN
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Sites
(1, 1)
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1: AC1 (SOFTWARE)
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No.
Name
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Description
1
AC1
SOFTWARE
DG I:70 , DG I:72 , DA I:73
BINDING SITE FOR RESIDUE CPT I 147
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
(3, 6)
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1: HISTONE_H2A (C:21-27,G:21-27)
2: HISTONE_H3_2 (A:66-74,E:66-74)
3: HISTONE_H2B (D:89-111,H:89-111)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
HISTONE_H2A
PS00046
Histone H2A signature.
H2A1_XENLA
22-28
2
C:21-27
G:21-27
2
HISTONE_H3_2
PS00959
Histone H3 signature 2.
H32_XENLA
67-75
2
A:66-74
E:66-74
3
HISTONE_H2B
PS00357
Histone H2B signature.
H2B11_XENLA
93-115
2
D:89-111
H:89-111
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Exons
(0, 0)
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SCOP Domains
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Pfam Domains
(1, 8)
Info
all PFAM domains
1a: PFAM_Histone_3o62G01 (G:17-90)
1b: PFAM_Histone_3o62G02 (G:17-90)
1c: PFAM_Histone_3o62H01 (H:28-98)
1d: PFAM_Histone_3o62H02 (H:28-98)
1e: PFAM_Histone_3o62E01 (E:57-131)
1f: PFAM_Histone_3o62E02 (E:57-131)
1g: PFAM_Histone_3o62F01 (F:24-93)
1h: PFAM_Histone_3o62F02 (F:24-93)
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Clan
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Histone
(49)
Family
:
Histone
(46)
Xenopus laevis (African clawed frog)
(32)
1a
Histone-3o62G01
G:17-90
1b
Histone-3o62G02
G:17-90
1c
Histone-3o62H01
H:28-98
1d
Histone-3o62H02
H:28-98
1e
Histone-3o62E01
E:57-131
1f
Histone-3o62E02
E:57-131
1g
Histone-3o62F01
F:24-93
1h
Histone-3o62F02
F:24-93
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Asym.Unit (529 KB)
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