Chain A from PDB Type:PROTEIN Length:98
aligned with H32_XENLA | P84233 from UniProtKB/Swiss-Prot Length:136
Alignment length:98
48 58 68 78 88 98 108 118 128
H32_XENLA 39 PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
SCOP domains d3c1ba_ A: Histone H3 SCOP domains
CATH domains 3c1bA00 A:438-535 Histone, subunit A CATH domains
Pfam domains -------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhhhhhhhhhhhhh.....hhhhhhhhhhhhhhh.....eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ----------------------------HISTONE_H------------------------------------------------------------- PROSITE (2)
Transcript -------------------------------------------------------------------------------------------------- Transcript
3c1b A 438 PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 535
447 457 467 477 487 497 507 517 527
Chain A from PDB Type:PROTEIN Length:98
aligned with H3C_XENLA | P02302 from UniProtKB/Swiss-Prot Length:136
Alignment length:98
48 58 68 78 88 98 108 118 128
H3C_XENLA 39 PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQRSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
SCOP domains d3c1ba_ A: Histone H3 SCOP domains
CATH domains 3c1bA00 A:438-535 Histone, subunit A CATH domains
Pfam domains -------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhhhhhhhhhhhhh.....hhhhhhhhhhhhhhh.....eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------HISTONE_H------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------- Transcript
3c1b A 438 PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 535
447 457 467 477 487 497 507 517 527
Chain B from PDB Type:PROTEIN Length:80
aligned with H4_XENLA | P62799 from UniProtKB/Swiss-Prot Length:103
Alignment length:80
33 43 53 63 73 83 93 103
H4_XENLA 24 RDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
SCOP domains d3c1bb_ B: Histone H4 SCOP domains
CATH domains 3c1bB00 B:23-102 Histone, subunit A CATH domains
Pfam domains -------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhhhhhhhhhhh...ee..hhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhh...ee.... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------- Transcript
3c1b B 23 RDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 102
32 42 52 62 72 82 92 102
Chain C from PDB Type:PROTEIN Length:106
aligned with H2A1_XENLA | P06897 from UniProtKB/Swiss-Prot Length:130
Alignment length:106
24 34 44 54 64 74 84 94 104 114
H2A1_XENLA 15 AKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQSVLLPKK 120
SCOP domains d3c1bc_ C: Histone H2A SCOP domains
CATH domains 3c1bC00 C:814-919 Histone, subunit A CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhh...hhhhhhhhhhhh....ee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhh..eee.........hhhhh... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------HISTONE-------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------- Transcript
3c1b C 814 AKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPKK 919
823 833 843 853 863 873 883 893 903 913
Chain D from PDB Type:PROTEIN Length:95
aligned with Q28D68_XENTR | Q28D68 from UniProtKB/TrEMBL Length:126
Alignment length:95
41 51 61 71 81 91 101 111 121
Q28D68_XENTR 32 KTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 126
SCOP domains d3c1bd_ D: Histone H2B SCOP domains
CATH domains 3c1bD00 D:1228-1322 Histone, subunit A CATH domains
Pfam domains ----------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------- Transcript
3c1b D 1228 KTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 1322
1237 1247 1257 1267 1277 1287 1297 1307 1317
Chain E from PDB Type:PROTEIN Length:99
aligned with H32_XENLA | P84233 from UniProtKB/Swiss-Prot Length:136
Alignment length:99
47 57 67 77 87 97 107 117 127
H32_XENLA 38 KPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
SCOP domains d3c1be_ E: Histone H3 SCOP domains
CATH domains 3c1bE00 E:637-735 Histone, subunit A CATH domains
Pfam domains --------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .......hhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhh.... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) -----------------------------HISTONE_H------------------------------------------------------------- PROSITE (2)
Transcript --------------------------------------------------------------------------------------------------- Transcript
3c1b E 637 KPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 735
646 656 666 676 686 696 706 716 726
Chain E from PDB Type:PROTEIN Length:99
aligned with H3C_XENLA | P02302 from UniProtKB/Swiss-Prot Length:136
Alignment length:99
47 57 67 77 87 97 107 117 127
H3C_XENLA 38 KPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQRSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
SCOP domains d3c1be_ E: Histone H3 SCOP domains
CATH domains 3c1bE00 E:637-735 Histone, subunit A CATH domains
Pfam domains --------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .......hhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhh.... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -----------------------------HISTONE_H------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------- Transcript
3c1b E 637 KPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 735
646 656 666 676 686 696 706 716 726
Chain F from PDB Type:PROTEIN Length:87
aligned with H4_XENLA | P62799 from UniProtKB/Swiss-Prot Length:103
Alignment length:87
26 36 46 56 66 76 86 96
H4_XENLA 17 KRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
SCOP domains d3c1bf_ F: Histone H4 SCOP domains
CATH domains 3c1bF00 F:216-302 Histone, subunit A CATH domains
Pfam domains --------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ........hhhhhhhhhhhhhhhhhh...ee..hhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhh..eee.... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------- Transcript
3c1b F 216 KRHRkVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 302
| 225 235 245 255 265 275 285 295
220-ML3
Chain G from PDB Type:PROTEIN Length:103
aligned with H2A1_XENLA | P06897 from UniProtKB/Swiss-Prot Length:130
Alignment length:103
26 36 46 56 66 76 86 96 106 116
H2A1_XENLA 17 TRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQSVLLPK 119
SCOP domains d3c1bg_ G: Histone H2A SCOP domains
CATH domains 3c1bG00 G:1016-1118 Histone, subunit A CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhh...hhhhhhhhhhhh....ee.hhhhhhhhhhhhhhhhhhhhhhhhhhhh....eehhhhhhhhhhhhhhhhhhh...ee.........hhhhh.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -----HISTONE------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------- Transcript
3c1b G 1016 TRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPK 1118
1025 1035 1045 1055 1065 1075 1085 1095 1105 1115
Chain H from PDB Type:PROTEIN Length:94
aligned with Q28D68_XENTR | Q28D68 from UniProtKB/TrEMBL Length:126
Alignment length:94
41 51 61 71 81 91 101 111 121
Q28D68_XENTR 32 KTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSA 125
SCOP domains d3c1bh_ H: Histone H2B SCOP domains
CATH domains 3c1bH00 H:1428-1521 Histone, subunit A CATH domains
Pfam domains ---------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------- Transcript
3c1b H 1428 KTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSA 1521
1437 1447 1457 1467 1477 1487 1497 1507 1517
Chain I from PDB Type:DNA Length:146
3c1b I 1 ATCAATATCCACCTGCAGATTCTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCGGAATTCCGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGAATCTGCAGGTGGATATTGAT 146
10 20 30 40 50 60 70 80 90 100 110 120 130 140
Chain J from PDB Type:DNA Length:146
3c1b J 147 ATCAATATCCACCTGCAGATTCTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCGGAATTCCGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGAATCTGCAGGTGGATATTGAT 292
156 166 176 186 196 206 216 226 236 246 256 266 276 286
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |