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Class: All beta proteins (24004)
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Fold: Sm-like fold (103)
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Superfamily: Dom34/Pelota N-terminal domain-like (3)
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Family: Dom34/Pelota N-terminal domain-like (3)
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Protein domain: Cell division protein pelota (1)
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Thermoplasma acidophilum [TaxId: 2303] (1)
2QI2A:1-126CRYSTAL STRUCTURE OF THE THERMOPLASMA ACIDOPHILUM PELOTA PROTEIN
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Protein domain: Dom34 (2)
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Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (2)
2VGMA:1-135STRUCTURE OF YEAST DOM34 : A PROTEIN RELATED TO TRANSLATION TERMINATION FACTOR ERF1 AND INVOLVED IN NO-GO DECAY.
2VGNA:1-135; B:1-135STRUCTURE OF YEAST DOM34 : A PROTEIN RELATED TO TRANSLATION TERMINATION FACTOR ERF1 AND INVOLVED IN NO-GO DECAY.
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Superfamily: GatD N-terminal domain-like (3)
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Family: automated matches (1)
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Protein domain: automated matches (1)
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Methanothermobacter thermautotrophicus [TaxId: 145262] (1)
2D6FB:2-73CRYSTAL STRUCTURE OF GLU-TRNA(GLN) AMIDOTRANSFERASE IN THE COMPLEX WITH TRNA(GLN)
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Family: GatD N-terminal domain-like (2)
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Protein domain: Glutamyl-tRNA(Gln) amidotransferase subunit D, GatD (2)
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Methanobacterium thermoautotrophicum [TaxId: 145262] (1)
2D6FA:2-73CRYSTAL STRUCTURE OF GLU-TRNA(GLN) AMIDOTRANSFERASE IN THE COMPLEX WITH TRNA(GLN)
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Pyrococcus abyssi [TaxId: 29292] (1)
1ZQ1A:2-75; B:2-75STRUCTURE OF GATDE TRNA-DEPENDENT AMIDOTRANSFERASE FROM PYROCOCCUS ABYSSI
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Superfamily: Sm-like ribonucleoproteins (95)
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Family: automated matches (22)
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Protein domain: automated matches (22)
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African clawed frog (Xenopus laevis) [TaxId: 8355] (1)
4F7UF:; I:THE 6S SNRNP ASSEMBLY INTERMEDIATE
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Bacillus subtilis [TaxId: 1423] (2)
3AHUA:; B:; C:CRYSTAL STRUCTURE OF YMAH (HFQ) FROM BACILLUS SUBTILIS IN COMPLEX WITH AN RNA APTAMER.
3HSBD:CRYSTAL STRUCTURE OF YMAH (HFQ) FROM BACILLUS SUBTILIS IN COMPLEX WITH AN RNA APTAMER
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Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (6)
3BW1A:; B:CRYSTAL STRUCTURE OF HOMOMERIC YEAST LSM3 EXHIBITING NOVEL OCTAMERIC RING ORGANISATION
4C92B:; C:; D:; E:; F:; G:CRYSTAL STRUCTURE OF THE YEAST LSM1-7 COMPLEX
4M75D:; E:; K:; L:CRYSTAL STRUCTURE OF LSM1-7 COMPLEX
4M77C:; D:; E:; F:; J:; K:; L:; M:CRYSTAL STRUCTURE OF LSM2-8 COMPLEX, SPACE GROUP I212121
4M78D:; F:; K:; L:; M:; E:CRYSTAL STRUCTURE OF LSM2-8 COMPLEX, SPACE GROUP P21
4N0AA:; B:; E:; F:CRYSTAL STRUCTURE OF LSM2-3-PAT1C COMPLEX FROM SACCHAROMYCES CEREVISIAE
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Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292] (4)
4M75B:; C:; F:; G:; I:; J:; M:; N:CRYSTAL STRUCTURE OF LSM1-7 COMPLEX
4M77B:; G:; I:; N:CRYSTAL STRUCTURE OF LSM2-8 COMPLEX, SPACE GROUP I212121
4M78B:; C:; G:; I:; J:; N:CRYSTAL STRUCTURE OF LSM2-8 COMPLEX, SPACE GROUP P21
4N0AC:; D:; G:CRYSTAL STRUCTURE OF LSM2-3-PAT1C COMPLEX FROM SACCHAROMYCES CEREVISIAE
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Human (Homo sapiens) [TaxId: 9606] (4)
3S6NF:; G:CRYSTAL STRUCTURE OF THE GEMIN2-BINDING DOMAIN OF SMN, GEMIN2 IN COMPLEX WITH SMD1/D2/F/E/G FROM HUMAN
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Mouse (Mus musculus) [TaxId: 10090] (1)
4F7UG:; J:THE 6S SNRNP ASSEMBLY INTERMEDIATE
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Schizosaccharomyces pombe [TaxId: 284812] (4)
3SWNA:; B:; D:; E:; P:; Q:; S:; T:STRUCTURE OF THE LSM657 COMPLEX: AN ASSEMBLY INTERMEDIATE OF THE LSM1 7 AND LSM2 8 RINGS
4EMGA:; B:; C:; D:; E:; F:; G:; H:; I:; J:; K:; L:; M:; N:CRYSTAL STRUCTURE OF SPLSM3
4EMHA:; B:; K:; L:; M:; N:; O:; P:; Q:; R:; T:; U:; C:; V:; W:; X:; Y:; D:; E:; F:; G:; H:; I:; J:CRYSTAL STRUCTURE OF SPLSM4
4EMKA:; B:CRYSTAL STRUCTURE OF SPLSM5/6/7
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Family: LSM14 N-terminal domain-like (3)
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Protein domain: automated matches (2)
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Fruit fly (Drosophila melanogaster) [TaxId: 7227] (1)
2VXEA:SOLUTION STRUCTURE OF THE LSM DOMAIN OF DROSOPHILA MELANOGASTER TRAL (TRAILER HITCH)
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Zebrafish (Danio rerio) [TaxId: 7955] (1)
2VXFA:SOLUTION STRUCTURE OF THE LSM-DOMAIN OF ZEBRAFISH RAP55
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Protein domain: LSM14 homolog A (Lsm14a) (1)
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Zebrafish (Danio rerio) [TaxId: 7955] (1)
2FB7A:16-95NMR SOLUTION STRUCTURE OF PROTEIN FROM ZEBRA FISH DR.13312
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Family: Mechanosensitive channel protein MscS (YggB), middle domain (2)
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Protein domain: Mechanosensitive channel protein MscS (YggB), middle domain (2)
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Escherichia coli [TaxId: 562] (2)
2OAUA:113-179; D:113-179; E:113-179; F:113-179; G:113-179; B:113-179; C:113-179MECHANOSENSITIVE CHANNEL OF SMALL CONDUCTANCE (MSCS)
2VV5A:113-179; B:113-179; C:113-179; D:113-179; E:113-179; F:113-179; G:113-179THE OPEN STRUCTURE OF MSCS
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Family: PF1955-like (2)
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Protein domain: automated matches (1)
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Pyrococcus furiosus [TaxId: 2261] (1)
1YCYB:; C:; D:CONSERVED HYPOTHETICAL PROTEIN PFU-1806301-001 FROM PYROCOCCUS FURIOSUS
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Protein domain: Hypothetical protein PF1955 (1)
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Pyrococcus furiosus [TaxId: 2261] (1)
1YCYA:5-70CONSERVED HYPOTHETICAL PROTEIN PFU-1806301-001 FROM PYROCOCCUS FURIOSUS
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Family: Pleiotropic translational regulator Hfq (28)
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Protein domain: automated matches (15)
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Escherichia coli K-12 [TaxId: 83333] (6)
3GIBA:; B:; C:CRYSTAL STRUCTURE OF THE COMPLEX OF THE E. COLI HFQ WITH POLY(A)
3QHSA:; B:; C:; D:; E:; F:; G:; H:; I:; J:; K:; L:CRYSTAL STRUCTURE OF FULL-LENGTH HFQ FROM ESCHERICHIA COLI
3VU3C:; D:; E:; F:; G:; H:CRYSTAL STRUCTURE OF THE HFQ AND CATALASE HPII COMPLEX
4JRIA:; B:; C:; D:CRYSTAL STRUCTURE OF ESCHERICHIA COLI HFQ PROXIMAL EDGE MUTANT
4JRKA:; B:; C:CRYSTAL STRUCTURE OF ESCHERICHIA COLI HFQ SURFACE MUTANT
4JUVA:; B:; C:; D:; E:; F:CRYSTAL STRUCTURE OF ESCHERICHIA COLI HFQ DISTAL FACE 1 MUTANT
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Escherichia coli [TaxId: 511693] (3)
3QO3A:; B:; C:; D:; E:; F:CRYSTAL STRUCTURE OF ESCHERICHIA COLI HFQ, IN COMPLEX WITH ATP
3RERA:; B:; C:; D:; E:; F:CRYSTAL STRUCTURE OF E. COLI HFQ IN COMPLEX WITH AU6A RNA AND ADP
3RESA:; E:; F:; G:; H:; I:; J:; K:; L:; B:; C:; D:CRYSTAL STRUCTURE OF E COLI HFQ IN COMPLEX WITH ADP
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Escherichia coli [TaxId: 562] (3)
2Y90A:CRYSTAL STRUCTURE OF HFQ RIBOREGULATOR FROM E. COLI (P6 SPACE GROUP)
2YHTA:; H:; I:; J:; K:; L:; B:; C:; D:; E:; F:; G:CRYSTAL STRUCTURE OF HFQ RIBOREGULATOR FROM E. COLI (P1 SPACE GROUP)
4JLIA:; B:CRYSTAL STRUCTURE OF ESCHERICHIA COLI HFQ PROXIMAL PORE MUTANT
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Herbaspirillum seropedicae [TaxId: 757424] (1)
3SB2A:; B:; C:; D:; E:; F:CRYSTAL STRUCTURE OF THE RNA CHAPERONE HFQ FROM HERBASPIRILLUM SEROPEDICAE SMR1
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Salmonella enterica [TaxId: 99287] (2)
2YLBA:; B:; C:; D:; E:; F:STRUCTURE OF SALMONELLA TYPHIMURIUM HFQ AT 1.15 A
2YLCA:STRUCTURE OF SALMONELLA TYPHIMURIUM HFQ IN COMPLEX WITH U6 RNA
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Protein domain: Pleiotropic translational regulator Hfq (13)
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Escherichia coli [TaxId: 562] (1)
1HK9A:; B:; C:; D:; E:; F:CRYSTAL STRUCTURE OF THE HFQ PROTEIN FROM ESCHERICHIA COLI
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Pseudomonas aeruginosa [TaxId: 287] (9)
1U1SA:6-71; E:; F:; B:; C:; D:HFQ PROTEIN FROM PSEUDOMONAS AERUGINOSA. LOW-SALT CRYSTALS
1U1TA:; B:; C:; D:; E:; F:HFQ PROTEIN FROM PSEUDOMONAS AERUGINOSA. HIGH-SALT CRYSTALS
3INZA:; B:; C:; D:; E:; F:H57T HFQ FROM PSEUDOMONAS AERUGINOSA
3M4GA:; B:; C:; D:; E:; F:; G:; H:; I:; J:; K:; L:H57A HFQ FROM PSEUDOMONAS AERUGINOSA
3QUIA:; B:; C:; D:; E:; F:CRYSTAL STRUCTURE OF PSEUDOMONAS AERUGINOSA HFQ IN COMPLEX WITH ADPNP
4J5YA:; B:; C:; D:; E:; F:CRYSTAL STRUCTURE OF HFQ FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH ATP
4J6WA:; B:; C:; D:; E:; F:CRYSTAL STRUCTURE OF HFQ FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH CTP
4J6XA:; B:; C:; D:; E:; F:CRYSTAL STRUCTURE OF HFQ FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH UTP
4J6YA:; B:; C:; D:; E:; F:HFQ FROM PSEUDOMONAS AERUGINOSA CRYSTALLIZED IN GTP PRESENCE
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Staphylococcus aureus [TaxId: 1280] (3)
1KQ1A:; B:; W:; Y:; H:; I:; K:; M:; N:; R:; S:; T:1.55 A CRYSTAL STRUCTURE OF THE PLEIOTROPIC TRANSLATIONAL REGULATOR, HFQ
1KQ2A:; B:; H:; I:; K:; M:CRYSTAL STRUCTURE OF AN HFQ-RNA COMPLEX
3QSUA:; B:; C:; D:; E:; F:; G:; H:; I:; J:; K:; M:; N:; S:STRUCTURE OF STAPHYLOCOCCUS AUREUS HFQ IN COMPLEX WITH A7 RNA
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Family: Sm motif of small nuclear ribonucleoproteins, SNRNP (31)
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Protein domain: Archaeal homoheptameric Sm protein (13)
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Archaeoglobus fulgidus, AF-Sm1 [TaxId: 2234] (2)
1I4K1:; 2:; I:; J:; K:; L:; M:; N:; O:; P:; Q:; R:; A:; S:; T:; U:; V:; W:; X:; Y:; Z:; B:; C:; D:; E:; F:; G:; H:CRYSTAL STRUCTURE OF AN SM-LIKE PROTEIN (AF-SM1) FROM ARCHAEOGLOBUS FULGIDUS AT 2.5A RESOLUTION
1I5LA:; B:; C:; D:; E:; F:; G:; H:; I:; J:; K:; L:; M:; N:CRYSTAL STRUCTURE OF AN SM-LIKE PROTEIN (AF-SM1) FROM ARCHAEOGLOBUS FULGIDUS COMPLEXED WITH SHORT POLY-U RNA
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Archaeoglobus fulgidus, AF-Sm2 [TaxId: 2234] (1)
1LJOA:CRYSTAL STRUCTURE OF AN SM-LIKE PROTEIN (AF-SM2) FROM ARCHAEOGLOBUS FULGIDUS AT 1.95A RESOLUTION
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Methanobacterium thermoautotrophicum [TaxId: 145262] (5)
1I81A:; B:; C:; D:; E:; F:; G:CRYSTAL STRUCTURE OF A HEPTAMERIC LSM PROTEIN FROM METHANOBACTERIUM THERMOAUTOTROPHICUM
1JBMA:; D:; E:; F:; G:; B:; C:HEPTAMERIC CRYSTAL STRUCTURE OF MTH649, AN SM-LIKE ARCHAEAL PROTEIN FROM METHANOBACTERIUM THERMAUTOTROPHICUM
1JRIA:; B:; C:; D:; E:; F:; G:; H:; I:; J:; K:; L:; M:; N:THE CRYSTAL STRUCTURE OF AN SM-LIKE ARCHAEAL PROTEIN WITH TWO HEPTAMERS IN THE ASYMMETRIC UNIT.
1LOJA:; B:; C:; D:; E:; F:; G:; H:; I:; J:; K:; L:; M:; N:CRYSTAL STRUCTURE OF A METHANOBACTERIAL SM-LIKE ARCHAEAL PROTEIN (SMAP1) BOUND TO URIDINE-5'-MONOPHOSPHATE (UMP)
1MGQA:; B:; C:; D:; E:; F:; G:CRYSTAL STRUCTURE OF A HEPTAMERIC SM-LIKE PROTEIN FROM METHANOBACTERIUM THERMOAUTOTROPHICUM
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Pyrobaculum aerophilum [TaxId: 13773] (2)
1I8FA:; B:; C:; D:; E:; F:; G:THE CRYSTAL STRUCTURE OF A HEPTAMERIC ARCHAEAL SM PROTEIN: IMPLICATIONS FOR THE EUKARYOTIC SNRNP CORE
1LNXA:; D:; E:; F:; G:; B:; C:CRYSTAL STRUCTURE OF THE P.AEROPHILUM SMAP1 HEPTAMER IN A NEW CRYSTAL FORM (C2221)
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Pyrococcus abyssi [TaxId: 29292] (2)
1H641:; 2:; I:; J:; K:; L:; M:; N:; O:; P:; Q:; R:; A:; S:; T:; U:; V:; W:; X:; Y:; Z:; B:; C:; D:; E:; F:; G:; H:CRYSTAL STRUCTURE OF THE SM-RELATED PROTEIN OF P. ABYSSI THE BIOLOGICAL UNIT IS A HEPTAMER
1M8VA:; B:; C:; D:; E:; F:; G:; H:; I:; J:; K:; L:; M:; N:STRUCTURE OF PYROCOCCUS ABYSSII SM PROTEIN IN COMPLEX WITH A URIDINE HEPTAMER
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Sulfolobus solfataricus [TaxId: 2287] (1)
1TH7A:3-78; B:; K:; L:; M:; N:; C:; D:; E:; F:; G:; H:; I:; J:CRYSTAL STRUCTURE OF AN ARCHAEAL SM PROTEIN FROM SULFOLOBUS SOLFATARICUS
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Protein domain: B core SNRNP protein (1)
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Human (Homo sapiens) [TaxId: 9606] (1)
1D3BB:; D:; F:; H:; J:; L:CRYSTAL STRUCTURE OF THE D3B SUBCOMPLEX OF THE HUMAN CORE SNRNP DOMAIN AT 2.0A RESOLUTION
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Protein domain: D1 core SNRNP protein (6)
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Human (Homo sapiens) [TaxId: 9606] (5)
1B34A:CRYSTAL STRUCTURE OF THE D1D2 SUB-COMPLEX FROM THE HUMAN SNRNP CORE DOMAIN
3S6NA:CRYSTAL STRUCTURE OF THE GEMIN2-BINDING DOMAIN OF SMN, GEMIN2 IN COMPLEX WITH SMD1/D2/F/E/G FROM HUMAN
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Mouse (Mus musculus) [TaxId: 10090] (1)
4F7UA:; C:THE 6S SNRNP ASSEMBLY INTERMEDIATE
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Protein domain: D2 core SNRNP protein (6)
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Human (Homo sapiens) [TaxId: 9606] (5)
1B34B:CRYSTAL STRUCTURE OF THE D1D2 SUB-COMPLEX FROM THE HUMAN SNRNP CORE DOMAIN
3S6NB:CRYSTAL STRUCTURE OF THE GEMIN2-BINDING DOMAIN OF SMN, GEMIN2 IN COMPLEX WITH SMD1/D2/F/E/G FROM HUMAN
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Mouse (Mus musculus) [TaxId: 10090] (1)
4F7UB:; D:THE 6S SNRNP ASSEMBLY INTERMEDIATE
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Protein domain: D3 core SNRNP protein (1)
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Human (Homo sapiens) [TaxId: 9606] (1)
1D3BA:; C:; E:; G:; I:; K:CRYSTAL STRUCTURE OF THE D3B SUBCOMPLEX OF THE HUMAN CORE SNRNP DOMAIN AT 2.0A RESOLUTION
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Protein domain: Sm-Like archaeal protein Smap3 (1)
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Pyrobaculum aerophilum [TaxId: 13773] (1)
1M5Q1:; 2:; I:; J:; K:; L:; M:; N:; O:; P:; Q:; R:; A:; S:; T:; U:; V:; W:; X:; Y:; Z:; B:; C:; D:; E:; F:; G:; H:CRYSTAL STRUCTURE OF A NOVEL SM-LIKE ARCHAEAL PROTEIN FROM PYROBACULUM AEROPHILUM
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Protein domain: Small nuclear ribonucleoprotein F, Smf (2)
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Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (2)
1N9RA:; B:; C:; D:; E:; F:; G:CRYSTAL STRUCTURE OF A HEPTAMERIC RING COMPLEX OF YEAST SMF IN SPACEGROUP P4122
1N9SA:; D:; E:; F:; G:; H:; I:; J:; K:; L:; M:; N:; B:; C:CRYSTAL STRUCTURE OF YEAST SMF IN SPACEGROUP P43212
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Protein domain: U6 snRNA-associated sm-like protein LSM5 (1)
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Cryptosporidium parvum [TaxId: 5807] (1)
3PGGA:; B:CRYSTAL STRUCTURE OF CRYPTOSPORIDIUM PARVUM U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM5
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Family: YgdI/YgdR-like (7)
(-)
Protein domain: automated matches (1)
(-)
Escherichia coli K-12 [TaxId: 83333] (1)
3FIFA:; B:; C:; D:; E:; F:; G:; H:CRYSTAL STRUCTURE OF THE YGDR PROTEIN FROM E.COLI. NORTHEAST STRUCTURAL GENOMICS TARGET ER382A.
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Protein domain: Hypothetical lipoprotein YgdR (1)
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Escherichia coli [TaxId: 562] (1)
2JN0A:4-53SOLUTION NMR STRUCTURE OF THE YGDR PROTEIN FROM ESCHERICHIA COLI. NORTHEAST STRUCTURAL GENOMICS TARGET ER382A.
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Protein domain: Putative outer membrane lipoprotein STM1585 (1)
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Salmonella typhimurium [TaxId: 90371] (1)
2RD1A:22-73; B:; C:X-RAY STRUCTURE OF THE PROTEIN Q7CQI7. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET STR87A
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Protein domain: Uncharacterized protein ECA1013 (1)
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Erwinia carotovora [TaxId: 554] (1)
3BDUA:2-54; B:; C:; D:; E:; F:; G:CRYSTAL STRUCTURE OF PROTEIN Q6D8G1 AT THE RESOLUTION 1.9 A. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET EWR22A.
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Protein domain: Uncharacterized protein PSPPH2109 (1)
(-)
Pseudomonas syringae [TaxId: 317] (1)
2K57A:2-53SOLUTION NMR STRUCTURE OF PUTATIVE LIPOPROTEIN FROM PSEUDOMONAS SYRINGAE GENE LOCUS PSPTO2350. NORTHEAST STRUCTURAL GENOMICS TARGET PSR76A.
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Protein domain: Uncharacterized protein SO0963 (1)
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Shewanella oneidensis [TaxId: 70863] (1)
2RB6A:25-76; B:X-RAY STRUCTURE OF THE PROTEIN Q8EI81. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET SOR78A
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Protein domain: Uncharacterized protein YgdI (1)
(-)
Salmonella typhimurium [TaxId: 90371] (1)
2RA2A:4-56; B:; C:; D:; E:; F:X-RAY STRUCTURE OF THE Q7CPV8 PROTEIN FROM SALMONELLA TYPHIMURIUM AT THE RESOLUTION 1.9 A. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET STR88A
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Superfamily: TrmB C-terminal domain-like (1)
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Family: TrmB C-terminal domain-like (1)
(-)
Protein domain: Transcriptional regulator TrmB (1)
(-)
Thermococcus litoralis [TaxId: 2265] (1)
2F5TX:247-338CRYSTAL STRUCTURE OF THE SUGAR BINDING DOMAIN OF THE ARCHAEAL TRANSCRIPTIONAL REGULATOR TRMB
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Superfamily: YhbC-like, C-terminal domain (1)
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Family: YhbC-like, C-terminal domain (1)
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Protein domain: Hypothetical protein SP14.3 (SP0552) (1)
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Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313] (1)
1IB8A:91-164SOLUTION STRUCTURE AND FUNCTION OF A CONSERVED PROTEIN SP14.3 ENCODED BY AN ESSENTIAL STREPTOCOCCUS PNEUMONIAE GENE