Chain A from PDB Type:PROTEIN Length:257
aligned with MSCS_ECO57 | P0C0S2 from UniProtKB/Swiss-Prot Length:286
Alignment length:257
34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274
MSCS_ECO57 25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
SCOP domains --d2vv5a3 A:27-112 Mechanosensitive channel protein MscS (YggB), transmembrane region d2vv5a1 A:113-179 d2vv5a2 A:180-280 Mechanosensitive channel protein MscS (YggB), C-terminal domain - SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------2vv5A02 A:129-178 2vv5A03 A:179-273 [code=3.30.70.100, no name defined] -------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........eee....eeeeeee...eeeee.....eeeeehhhhhh..eee.....eeeeeeeeee....hhhhhhhhhhhhhhhh........eeeeeeee....eeeeeeeeee..hhhhhhhhhhhhhhhhhhhhh......eeeeeee... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ----------------------------------------------------------------------------------------------------------------------UPF0003 PDB: A:143-177 -------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2vv5 A 25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLVVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274
Chain A from PDB Type:PROTEIN Length:257
aligned with MSCS_ECOLI | P0C0S1 from UniProtKB/Swiss-Prot Length:286
Alignment length:257
34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274
MSCS_ECOLI 25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
SCOP domains --d2vv5a3 A:27-112 Mechanosensitive channel protein MscS (YggB), transmembrane region d2vv5a1 A:113-179 d2vv5a2 A:180-280 Mechanosensitive channel protein MscS (YggB), C-terminal domain - SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------2vv5A02 A:129-178 2vv5A03 A:179-273 [code=3.30.70.100, no name defined] -------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........eee....eeeeeee...eeeee.....eeeeehhhhhh..eee.....eeeeeeeeee....hhhhhhhhhhhhhhhh........eeeeeeee....eeeeeeeeee..hhhhhhhhhhhhhhhhhhhhh......eeeeeee... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------UPF0003 PDB: A:143-177 -------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2vv5 A 25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLVVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274
Chain B from PDB Type:PROTEIN Length:257
aligned with MSCS_ECO57 | P0C0S2 from UniProtKB/Swiss-Prot Length:286
Alignment length:257
34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274
MSCS_ECO57 25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
SCOP domains --d2vv5b3 B:27-112 Mechanosensitive channel protein MscS (YggB), transmembrane region d2vv5b1 B:113-179 d2vv5b2 B:180-280 Mechanosensitive channel protein MscS (YggB), C-terminal domain - SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------2vv5B02 B:129-178 2vv5B03 B:179-273 [code=3.30.70.100, no name defined] -------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........eee....eeeeeee...eeeee.....eeeeehhhhhh..eee.....eeeeeeeeee....hhhhhhhhhhhhhhhh........eeeeeeee....eeeeeeeeee..hhhhhhhhhhhhhhhhhhhhh......eeeeeee... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ----------------------------------------------------------------------------------------------------------------------UPF0003 PDB: B:143-177 -------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2vv5 B 25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLVVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274
Chain B from PDB Type:PROTEIN Length:257
aligned with MSCS_ECOLI | P0C0S1 from UniProtKB/Swiss-Prot Length:286
Alignment length:257
34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274
MSCS_ECOLI 25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
SCOP domains --d2vv5b3 B:27-112 Mechanosensitive channel protein MscS (YggB), transmembrane region d2vv5b1 B:113-179 d2vv5b2 B:180-280 Mechanosensitive channel protein MscS (YggB), C-terminal domain - SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------2vv5B02 B:129-178 2vv5B03 B:179-273 [code=3.30.70.100, no name defined] -------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........eee....eeeeeee...eeeee.....eeeeehhhhhh..eee.....eeeeeeeeee....hhhhhhhhhhhhhhhh........eeeeeeee....eeeeeeeeee..hhhhhhhhhhhhhhhhhhhhh......eeeeeee... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------UPF0003 PDB: B:143-177 -------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2vv5 B 25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLVVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274
Chain C from PDB Type:PROTEIN Length:257
aligned with MSCS_ECO57 | P0C0S2 from UniProtKB/Swiss-Prot Length:286
Alignment length:257
34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274
MSCS_ECO57 25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
SCOP domains --d2vv5c3 C:27-112 Mechanosensitive channel protein MscS (YggB), transmembrane region d2vv5c1 C:113-179 d2vv5c2 C:180-280 Mechanosensitive channel protein MscS (YggB), C-terminal domain - SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------2vv5C02 C:129-178 2vv5C03 C:179-273 [code=3.30.70.100, no name defined] -------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........eee....eeeeeee...eeeee.....eeeeehhhhhh..eee.....eeeeeeeeee....hhhhhhhhhhhhhhhh........eeeeeeee....eeeeeeeeee..hhhhhhhhhhhhhhhhhhhhh......eeeeeee... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ----------------------------------------------------------------------------------------------------------------------UPF0003 PDB: C:143-177 -------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2vv5 C 25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLVVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274
Chain C from PDB Type:PROTEIN Length:257
aligned with MSCS_ECOLI | P0C0S1 from UniProtKB/Swiss-Prot Length:286
Alignment length:257
34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274
MSCS_ECOLI 25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
SCOP domains --d2vv5c3 C:27-112 Mechanosensitive channel protein MscS (YggB), transmembrane region d2vv5c1 C:113-179 d2vv5c2 C:180-280 Mechanosensitive channel protein MscS (YggB), C-terminal domain - SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------2vv5C02 C:129-178 2vv5C03 C:179-273 [code=3.30.70.100, no name defined] -------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........eee....eeeeeee...eeeee.....eeeeehhhhhh..eee.....eeeeeeeeee....hhhhhhhhhhhhhhhh........eeeeeeee....eeeeeeeeee..hhhhhhhhhhhhhhhhhhhhh......eeeeeee... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------UPF0003 PDB: C:143-177 -------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2vv5 C 25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLVVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274
Chain D from PDB Type:PROTEIN Length:257
aligned with MSCS_ECO57 | P0C0S2 from UniProtKB/Swiss-Prot Length:286
Alignment length:257
34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274
MSCS_ECO57 25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
SCOP domains --d2vv5d3 D:27-112 Mechanosensitive channel protein MscS (YggB), transmembrane region d2vv5d1 D:113-179 d2vv5d2 D:180-280 Mechanosensitive channel protein MscS (YggB), C-terminal domain - SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------2vv5D02 D:129-178 2vv5D03 D:179-273 [code=3.30.70.100, no name defined] -------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........eee....eeeeeee...eeeee.....eeeeehhhhhh..eee.....eeeeeeeeee....hhhhhhhhhhhhhhhh........eeeeeeee....eeeeeeeeee..hhhhhhhhhhhhhhhhhhhhh......eeeeeee... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ----------------------------------------------------------------------------------------------------------------------UPF0003 PDB: D:143-177 -------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2vv5 D 25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLVVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274
Chain D from PDB Type:PROTEIN Length:257
aligned with MSCS_ECOLI | P0C0S1 from UniProtKB/Swiss-Prot Length:286
Alignment length:257
34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274
MSCS_ECOLI 25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
SCOP domains --d2vv5d3 D:27-112 Mechanosensitive channel protein MscS (YggB), transmembrane region d2vv5d1 D:113-179 d2vv5d2 D:180-280 Mechanosensitive channel protein MscS (YggB), C-terminal domain - SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------2vv5D02 D:129-178 2vv5D03 D:179-273 [code=3.30.70.100, no name defined] -------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........eee....eeeeeee...eeeee.....eeeeehhhhhh..eee.....eeeeeeeeee....hhhhhhhhhhhhhhhh........eeeeeeee....eeeeeeeeee..hhhhhhhhhhhhhhhhhhhhh......eeeeeee... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------UPF0003 PDB: D:143-177 -------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2vv5 D 25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLVVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274
Chain E from PDB Type:PROTEIN Length:257
aligned with MSCS_ECO57 | P0C0S2 from UniProtKB/Swiss-Prot Length:286
Alignment length:257
34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274
MSCS_ECO57 25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
SCOP domains --d2vv5e3 E:27-112 Mechanosensitive channel protein MscS (YggB), transmembrane region d2vv5e1 E:113-179 d2vv5e2 E:180-280 Mechanosensitive channel protein MscS (YggB), C-terminal domain - SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------2vv5E02 E:129-178 2vv5E03 E:179-273 [code=3.30.70.100, no name defined] -------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........eee....eeeeeee...eeeee.....eeeeehhhhhh..eee.....eeeeeeeeee....hhhhhhhhhhhhhhhh........eeeeeeee....eeeeeeeeee..hhhhhhhhhhhhhhhhhhhh.......eeeeeeee.. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ----------------------------------------------------------------------------------------------------------------------UPF0003 PDB: E:143-177 -------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2vv5 E 25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLVVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274
Chain E from PDB Type:PROTEIN Length:257
aligned with MSCS_ECOLI | P0C0S1 from UniProtKB/Swiss-Prot Length:286
Alignment length:257
34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274
MSCS_ECOLI 25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
SCOP domains --d2vv5e3 E:27-112 Mechanosensitive channel protein MscS (YggB), transmembrane region d2vv5e1 E:113-179 d2vv5e2 E:180-280 Mechanosensitive channel protein MscS (YggB), C-terminal domain - SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------2vv5E02 E:129-178 2vv5E03 E:179-273 [code=3.30.70.100, no name defined] -------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........eee....eeeeeee...eeeee.....eeeeehhhhhh..eee.....eeeeeeeeee....hhhhhhhhhhhhhhhh........eeeeeeee....eeeeeeeeee..hhhhhhhhhhhhhhhhhhhh.......eeeeeeee.. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------UPF0003 PDB: E:143-177 -------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2vv5 E 25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLVVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274
Chain F from PDB Type:PROTEIN Length:257
aligned with MSCS_ECO57 | P0C0S2 from UniProtKB/Swiss-Prot Length:286
Alignment length:257
34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274
MSCS_ECO57 25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
SCOP domains --d2vv5f3 F:27-112 Mechanosensitive channel protein MscS (YggB), transmembrane region d2vv5f1 F:113-179 d2vv5f2 F:180-280 Mechanosensitive channel protein MscS (YggB), C-terminal domain - SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------2vv5F02 F:129-178 2vv5F03 F:179-273 [code=3.30.70.100, no name defined] -------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........eee....eeeeeee...eeeee.....eeeeehhhhhh..eee.....eeeeeeeeee....hhhhhhhhhhhhhhhh........eeeeeeee....eeeeeeeeee..hhhhhhhhhhhhhhhhhhhhh......eeeeeeee.. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ----------------------------------------------------------------------------------------------------------------------UPF0003 PDB: F:143-177 -------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2vv5 F 25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLVVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274
Chain F from PDB Type:PROTEIN Length:257
aligned with MSCS_ECOLI | P0C0S1 from UniProtKB/Swiss-Prot Length:286
Alignment length:257
34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274
MSCS_ECOLI 25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
SCOP domains --d2vv5f3 F:27-112 Mechanosensitive channel protein MscS (YggB), transmembrane region d2vv5f1 F:113-179 d2vv5f2 F:180-280 Mechanosensitive channel protein MscS (YggB), C-terminal domain - SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------2vv5F02 F:129-178 2vv5F03 F:179-273 [code=3.30.70.100, no name defined] -------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........eee....eeeeeee...eeeee.....eeeeehhhhhh..eee.....eeeeeeeeee....hhhhhhhhhhhhhhhh........eeeeeeee....eeeeeeeeee..hhhhhhhhhhhhhhhhhhhhh......eeeeeeee.. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------UPF0003 PDB: F:143-177 -------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2vv5 F 25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLVVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274
Chain G from PDB Type:PROTEIN Length:257
aligned with MSCS_ECO57 | P0C0S2 from UniProtKB/Swiss-Prot Length:286
Alignment length:257
34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274
MSCS_ECO57 25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
SCOP domains --d2vv5g3 G:27-112 Mechanosensitive channel protein MscS (YggB), transmembrane region d2vv5g1 G:113-179 d2vv5g2 G:180-280 Mechanosensitive channel protein MscS (YggB), C-terminal domain - SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------2vv5G02 G:129-178 2vv5G03 G:179-273 [code=3.30.70.100, no name defined] -------- CATH domains
Pfam domains (1) TM_helix-2vv5G08 G:25-66 ---MS_channel-2vv5G01 G:70-268 ------------- Pfam domains (1)
Pfam domains (2) TM_helix-2vv5G09 G:25-66 ---MS_channel-2vv5G02 G:70-268 ------------- Pfam domains (2)
Pfam domains (3) TM_helix-2vv5G10 G:25-66 ---MS_channel-2vv5G03 G:70-268 ------------- Pfam domains (3)
Pfam domains (4) TM_helix-2vv5G11 G:25-66 ---MS_channel-2vv5G04 G:70-268 ------------- Pfam domains (4)
Pfam domains (5) TM_helix-2vv5G12 G:25-66 ---MS_channel-2vv5G05 G:70-268 ------------- Pfam domains (5)
Pfam domains (6) TM_helix-2vv5G13 G:25-66 ---MS_channel-2vv5G06 G:70-268 ------------- Pfam domains (6)
Pfam domains (7) TM_helix-2vv5G14 G:25-66 ---MS_channel-2vv5G07 G:70-268 ------------- Pfam domains (7)
Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........eee....eeeeeee...eeeee.....eeeeehhhhhh..eee.....eeeeeeeeee....hhhhhhhhhhhhhhhh........eeeeeeee....eeeeeeeeee..hhhhhhhhhhhhhhhhhhhhh......eeeeeee... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ----------------------------------------------------------------------------------------------------------------------UPF0003 PDB: G:143-177 -------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2vv5 G 25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLVVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274
Chain G from PDB Type:PROTEIN Length:257
aligned with MSCS_ECOLI | P0C0S1 from UniProtKB/Swiss-Prot Length:286
Alignment length:257
34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274
MSCS_ECOLI 25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
SCOP domains --d2vv5g3 G:27-112 Mechanosensitive channel protein MscS (YggB), transmembrane region d2vv5g1 G:113-179 d2vv5g2 G:180-280 Mechanosensitive channel protein MscS (YggB), C-terminal domain - SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------2vv5G02 G:129-178 2vv5G03 G:179-273 [code=3.30.70.100, no name defined] -------- CATH domains
Pfam domains (1) TM_helix-2vv5G08 G:25-66 ---MS_channel-2vv5G01 G:70-268 ------------- Pfam domains (1)
Pfam domains (2) TM_helix-2vv5G09 G:25-66 ---MS_channel-2vv5G02 G:70-268 ------------- Pfam domains (2)
Pfam domains (3) TM_helix-2vv5G10 G:25-66 ---MS_channel-2vv5G03 G:70-268 ------------- Pfam domains (3)
Pfam domains (4) TM_helix-2vv5G11 G:25-66 ---MS_channel-2vv5G04 G:70-268 ------------- Pfam domains (4)
Pfam domains (5) TM_helix-2vv5G12 G:25-66 ---MS_channel-2vv5G05 G:70-268 ------------- Pfam domains (5)
Pfam domains (6) TM_helix-2vv5G13 G:25-66 ---MS_channel-2vv5G06 G:70-268 ------------- Pfam domains (6)
Pfam domains (7) TM_helix-2vv5G14 G:25-66 ---MS_channel-2vv5G07 G:70-268 ------------- Pfam domains (7)
Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........eee....eeeeeee...eeeee.....eeeeehhhhhh..eee.....eeeeeeeeee....hhhhhhhhhhhhhhhh........eeeeeeee....eeeeeeeeee..hhhhhhhhhhhhhhhhhhhhh......eeeeeee... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------UPF0003 PDB: G:143-177 -------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2vv5 G 25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLVVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |