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(-)Asym./Biol. Unit
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Asym./Biol. Unit  (Jmol Viewer)

(-) Description

Title :  THE OPEN STRUCTURE OF MSCS
 
Authors :  W. Wang, C. Dong, K. A. Johnson, J. H. Naismith
Date :  03 Jun 08  (Deposition) - 05 Aug 08  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.45
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G
Keywords :  Ion Transport, Transmembrane, Inner Membrane, Membrane Structure, Membrane Protein, Membrane, Transport, Open Channel, Ionic Channel (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  W. Wang, S. S. Black, M. D. Edwards, S. Miller, E. L. Morrison, W. Bartlett, C. Dong, J. H. Naismith, I. R. Booth
The Structure Of An Open Form Of An E. Coli Mechanosensitive Channel At 3. 45 A Resolution.
Science V. 321 1179 2008
PubMed-ID: 18755969  |  Reference-DOI: 10.1126/SCIENCE.1159262

(-) Compounds

Molecule 1 - SMALL-CONDUCTANCE MECHANOSENSITIVE CHANNEL
    Chains: A, B, C, D, E, F, G
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Mutation: YES
    Organism Scientific: ESCHERICHIA COLI
    Organism Taxid: 562
    Synonym: MSCS

 Structural Features

(-) Chains, Units

  1234567
Asymmetric/Biological Unit : ABCDEFG

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2VV5)

(-) Sites  (0, 0)

(no "Site" information available for 2VV5)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2VV5)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2VV5)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2VV5)

(-) PROSITE Motifs  (1, 7)

Asymmetric/Biological Unit (1, 7)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1UPF0003PS01246 Uncharacterized protein family UPF0003 signature.MSCS_ECO57143-177
 
 
 
 
 
 		  7A:143-177
B:143-177
C:143-177
D:143-177
E:143-177
F:143-177
G:143-177
MSCS_ECOLI143-177
 
 
 
 
 
 		  7A:143-177
B:143-177
C:143-177
D:143-177
E:143-177
F:143-177
G:143-177

(-) Exons   (0, 0)

(no "Exon" information available for 2VV5)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:257
 aligned with MSCS_ECO57 | P0C0S2 from UniProtKB/Swiss-Prot  Length:286

    Alignment length:257
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       
           MSCS_ECO57    25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
               SCOP domains --d2vv5a3 A:27-112 Mechanosensitive channel protein MscS (YggB), transmembrane region   d2vv5a1 A:113-179                                                  d2vv5a2 A:180-280 Mechanosensitive channel protein MscS (YggB), C-terminal domain                    - SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------2vv5A02 A:129-178                                 2vv5A03 A:179-273  [code=3.30.70.100, no name defined]                                         -------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........eee....eeeeeee...eeeee.....eeeeehhhhhh..eee.....eeeeeeeeee....hhhhhhhhhhhhhhhh........eeeeeeee....eeeeeeeeee..hhhhhhhhhhhhhhhhhhhhh......eeeeeee... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------------------------------------------------------UPF0003  PDB: A:143-177            -------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2vv5 A  25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLVVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       


Chain A from PDB  Type:PROTEIN  Length:257
 aligned with MSCS_ECOLI | P0C0S1 from UniProtKB/Swiss-Prot  Length:286

    Alignment length:257
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       
           MSCS_ECOLI    25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
               SCOP domains --d2vv5a3 A:27-112 Mechanosensitive channel protein MscS (YggB), transmembrane region   d2vv5a1 A:113-179                                                  d2vv5a2 A:180-280 Mechanosensitive channel protein MscS (YggB), C-terminal domain                    - SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------2vv5A02 A:129-178                                 2vv5A03 A:179-273  [code=3.30.70.100, no name defined]                                         -------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........eee....eeeeeee...eeeee.....eeeeehhhhhh..eee.....eeeeeeeeee....hhhhhhhhhhhhhhhh........eeeeeeee....eeeeeeeeee..hhhhhhhhhhhhhhhhhhhhh......eeeeeee... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------UPF0003  PDB: A:143-177            -------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2vv5 A  25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLVVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       


Chain B from PDB  Type:PROTEIN  Length:257
 aligned with MSCS_ECO57 | P0C0S2 from UniProtKB/Swiss-Prot  Length:286

    Alignment length:257
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       
           MSCS_ECO57    25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
               SCOP domains --d2vv5b3 B:27-112 Mechanosensitive channel protein MscS (YggB), transmembrane region   d2vv5b1 B:113-179                                                  d2vv5b2 B:180-280 Mechanosensitive channel protein MscS (YggB), C-terminal domain                    - SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------2vv5B02 B:129-178                                 2vv5B03 B:179-273  [code=3.30.70.100, no name defined]                                         -------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........eee....eeeeeee...eeeee.....eeeeehhhhhh..eee.....eeeeeeeeee....hhhhhhhhhhhhhhhh........eeeeeeee....eeeeeeeeee..hhhhhhhhhhhhhhhhhhhhh......eeeeeee... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------------------------------------------------------UPF0003  PDB: B:143-177            -------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2vv5 B  25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLVVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       


Chain B from PDB  Type:PROTEIN  Length:257
 aligned with MSCS_ECOLI | P0C0S1 from UniProtKB/Swiss-Prot  Length:286

    Alignment length:257
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       
           MSCS_ECOLI    25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
               SCOP domains --d2vv5b3 B:27-112 Mechanosensitive channel protein MscS (YggB), transmembrane region   d2vv5b1 B:113-179                                                  d2vv5b2 B:180-280 Mechanosensitive channel protein MscS (YggB), C-terminal domain                    - SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------2vv5B02 B:129-178                                 2vv5B03 B:179-273  [code=3.30.70.100, no name defined]                                         -------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........eee....eeeeeee...eeeee.....eeeeehhhhhh..eee.....eeeeeeeeee....hhhhhhhhhhhhhhhh........eeeeeeee....eeeeeeeeee..hhhhhhhhhhhhhhhhhhhhh......eeeeeee... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------UPF0003  PDB: B:143-177            -------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2vv5 B  25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLVVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       


Chain C from PDB  Type:PROTEIN  Length:257
 aligned with MSCS_ECO57 | P0C0S2 from UniProtKB/Swiss-Prot  Length:286

    Alignment length:257
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       
           MSCS_ECO57    25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
               SCOP domains --d2vv5c3 C:27-112 Mechanosensitive channel protein MscS (YggB), transmembrane region   d2vv5c1 C:113-179                                                  d2vv5c2 C:180-280 Mechanosensitive channel protein MscS (YggB), C-terminal domain                    - SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------2vv5C02 C:129-178                                 2vv5C03 C:179-273  [code=3.30.70.100, no name defined]                                         -------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........eee....eeeeeee...eeeee.....eeeeehhhhhh..eee.....eeeeeeeeee....hhhhhhhhhhhhhhhh........eeeeeeee....eeeeeeeeee..hhhhhhhhhhhhhhhhhhhhh......eeeeeee... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------------------------------------------------------UPF0003  PDB: C:143-177            -------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2vv5 C  25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLVVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       


Chain C from PDB  Type:PROTEIN  Length:257
 aligned with MSCS_ECOLI | P0C0S1 from UniProtKB/Swiss-Prot  Length:286

    Alignment length:257
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       
           MSCS_ECOLI    25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
               SCOP domains --d2vv5c3 C:27-112 Mechanosensitive channel protein MscS (YggB), transmembrane region   d2vv5c1 C:113-179                                                  d2vv5c2 C:180-280 Mechanosensitive channel protein MscS (YggB), C-terminal domain                    - SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------2vv5C02 C:129-178                                 2vv5C03 C:179-273  [code=3.30.70.100, no name defined]                                         -------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........eee....eeeeeee...eeeee.....eeeeehhhhhh..eee.....eeeeeeeeee....hhhhhhhhhhhhhhhh........eeeeeeee....eeeeeeeeee..hhhhhhhhhhhhhhhhhhhhh......eeeeeee... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------UPF0003  PDB: C:143-177            -------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2vv5 C  25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLVVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       


Chain D from PDB  Type:PROTEIN  Length:257
 aligned with MSCS_ECO57 | P0C0S2 from UniProtKB/Swiss-Prot  Length:286

    Alignment length:257
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       
           MSCS_ECO57    25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
               SCOP domains --d2vv5d3 D:27-112 Mechanosensitive channel protein MscS (YggB), transmembrane region   d2vv5d1 D:113-179                                                  d2vv5d2 D:180-280 Mechanosensitive channel protein MscS (YggB), C-terminal domain                    - SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------2vv5D02 D:129-178                                 2vv5D03 D:179-273  [code=3.30.70.100, no name defined]                                         -------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........eee....eeeeeee...eeeee.....eeeeehhhhhh..eee.....eeeeeeeeee....hhhhhhhhhhhhhhhh........eeeeeeee....eeeeeeeeee..hhhhhhhhhhhhhhhhhhhhh......eeeeeee... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------------------------------------------------------UPF0003  PDB: D:143-177            -------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2vv5 D  25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLVVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       


Chain D from PDB  Type:PROTEIN  Length:257
 aligned with MSCS_ECOLI | P0C0S1 from UniProtKB/Swiss-Prot  Length:286

    Alignment length:257
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       
           MSCS_ECOLI    25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
               SCOP domains --d2vv5d3 D:27-112 Mechanosensitive channel protein MscS (YggB), transmembrane region   d2vv5d1 D:113-179                                                  d2vv5d2 D:180-280 Mechanosensitive channel protein MscS (YggB), C-terminal domain                    - SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------2vv5D02 D:129-178                                 2vv5D03 D:179-273  [code=3.30.70.100, no name defined]                                         -------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........eee....eeeeeee...eeeee.....eeeeehhhhhh..eee.....eeeeeeeeee....hhhhhhhhhhhhhhhh........eeeeeeee....eeeeeeeeee..hhhhhhhhhhhhhhhhhhhhh......eeeeeee... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------UPF0003  PDB: D:143-177            -------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2vv5 D  25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLVVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       


Chain E from PDB  Type:PROTEIN  Length:257
 aligned with MSCS_ECO57 | P0C0S2 from UniProtKB/Swiss-Prot  Length:286

    Alignment length:257
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       
           MSCS_ECO57    25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
               SCOP domains --d2vv5e3 E:27-112 Mechanosensitive channel protein MscS (YggB), transmembrane region   d2vv5e1 E:113-179                                                  d2vv5e2 E:180-280 Mechanosensitive channel protein MscS (YggB), C-terminal domain                    - SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------2vv5E02 E:129-178                                 2vv5E03 E:179-273  [code=3.30.70.100, no name defined]                                         -------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........eee....eeeeeee...eeeee.....eeeeehhhhhh..eee.....eeeeeeeeee....hhhhhhhhhhhhhhhh........eeeeeeee....eeeeeeeeee..hhhhhhhhhhhhhhhhhhhh.......eeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------------------------------------------------------UPF0003  PDB: E:143-177            -------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2vv5 E  25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLVVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       


Chain E from PDB  Type:PROTEIN  Length:257
 aligned with MSCS_ECOLI | P0C0S1 from UniProtKB/Swiss-Prot  Length:286

    Alignment length:257
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       
           MSCS_ECOLI    25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
               SCOP domains --d2vv5e3 E:27-112 Mechanosensitive channel protein MscS (YggB), transmembrane region   d2vv5e1 E:113-179                                                  d2vv5e2 E:180-280 Mechanosensitive channel protein MscS (YggB), C-terminal domain                    - SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------2vv5E02 E:129-178                                 2vv5E03 E:179-273  [code=3.30.70.100, no name defined]                                         -------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........eee....eeeeeee...eeeee.....eeeeehhhhhh..eee.....eeeeeeeeee....hhhhhhhhhhhhhhhh........eeeeeeee....eeeeeeeeee..hhhhhhhhhhhhhhhhhhhh.......eeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------UPF0003  PDB: E:143-177            -------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2vv5 E  25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLVVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       


Chain F from PDB  Type:PROTEIN  Length:257
 aligned with MSCS_ECO57 | P0C0S2 from UniProtKB/Swiss-Prot  Length:286

    Alignment length:257
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       
           MSCS_ECO57    25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
               SCOP domains --d2vv5f3 F:27-112 Mechanosensitive channel protein MscS (YggB), transmembrane region   d2vv5f1 F:113-179                                                  d2vv5f2 F:180-280 Mechanosensitive channel protein MscS (YggB), C-terminal domain                    - SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------2vv5F02 F:129-178                                 2vv5F03 F:179-273  [code=3.30.70.100, no name defined]                                         -------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........eee....eeeeeee...eeeee.....eeeeehhhhhh..eee.....eeeeeeeeee....hhhhhhhhhhhhhhhh........eeeeeeee....eeeeeeeeee..hhhhhhhhhhhhhhhhhhhhh......eeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------------------------------------------------------UPF0003  PDB: F:143-177            -------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2vv5 F  25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLVVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       


Chain F from PDB  Type:PROTEIN  Length:257
 aligned with MSCS_ECOLI | P0C0S1 from UniProtKB/Swiss-Prot  Length:286

    Alignment length:257
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       
           MSCS_ECOLI    25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
               SCOP domains --d2vv5f3 F:27-112 Mechanosensitive channel protein MscS (YggB), transmembrane region   d2vv5f1 F:113-179                                                  d2vv5f2 F:180-280 Mechanosensitive channel protein MscS (YggB), C-terminal domain                    - SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------2vv5F02 F:129-178                                 2vv5F03 F:179-273  [code=3.30.70.100, no name defined]                                         -------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........eee....eeeeeee...eeeee.....eeeeehhhhhh..eee.....eeeeeeeeee....hhhhhhhhhhhhhhhh........eeeeeeee....eeeeeeeeee..hhhhhhhhhhhhhhhhhhhhh......eeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------UPF0003  PDB: F:143-177            -------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2vv5 F  25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLVVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       


Chain G from PDB  Type:PROTEIN  Length:257
 aligned with MSCS_ECO57 | P0C0S2 from UniProtKB/Swiss-Prot  Length:286

    Alignment length:257
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       
           MSCS_ECO57    25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
               SCOP domains --d2vv5g3 G:27-112 Mechanosensitive channel protein MscS (YggB), transmembrane region   d2vv5g1 G:113-179                                                  d2vv5g2 G:180-280 Mechanosensitive channel protein MscS (YggB), C-terminal domain                    - SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------2vv5G02 G:129-178                                 2vv5G03 G:179-273  [code=3.30.70.100, no name defined]                                         -------- CATH domains
           Pfam domains (1) TM_helix-2vv5G08 G:25-66                  ---MS_channel-2vv5G01 G:70-268                                                                                                                                                                            ------------- Pfam domains (1)
           Pfam domains (2) TM_helix-2vv5G09 G:25-66                  ---MS_channel-2vv5G02 G:70-268                                                                                                                                                                            ------------- Pfam domains (2)
           Pfam domains (3) TM_helix-2vv5G10 G:25-66                  ---MS_channel-2vv5G03 G:70-268                                                                                                                                                                            ------------- Pfam domains (3)
           Pfam domains (4) TM_helix-2vv5G11 G:25-66                  ---MS_channel-2vv5G04 G:70-268                                                                                                                                                                            ------------- Pfam domains (4)
           Pfam domains (5) TM_helix-2vv5G12 G:25-66                  ---MS_channel-2vv5G05 G:70-268                                                                                                                                                                            ------------- Pfam domains (5)
           Pfam domains (6) TM_helix-2vv5G13 G:25-66                  ---MS_channel-2vv5G06 G:70-268                                                                                                                                                                            ------------- Pfam domains (6)
           Pfam domains (7) TM_helix-2vv5G14 G:25-66                  ---MS_channel-2vv5G07 G:70-268                                                                                                                                                                            ------------- Pfam domains (7)
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........eee....eeeeeee...eeeee.....eeeeehhhhhh..eee.....eeeeeeeeee....hhhhhhhhhhhhhhhh........eeeeeeee....eeeeeeeeee..hhhhhhhhhhhhhhhhhhhhh......eeeeeee... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------------------------------------------------------UPF0003  PDB: G:143-177            -------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2vv5 G  25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLVVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       


Chain G from PDB  Type:PROTEIN  Length:257
 aligned with MSCS_ECOLI | P0C0S1 from UniProtKB/Swiss-Prot  Length:286

    Alignment length:257
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       
           MSCS_ECOLI    25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
               SCOP domains --d2vv5g3 G:27-112 Mechanosensitive channel protein MscS (YggB), transmembrane region   d2vv5g1 G:113-179                                                  d2vv5g2 G:180-280 Mechanosensitive channel protein MscS (YggB), C-terminal domain                    - SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------2vv5G02 G:129-178                                 2vv5G03 G:179-273  [code=3.30.70.100, no name defined]                                         -------- CATH domains
           Pfam domains (1) TM_helix-2vv5G08 G:25-66                  ---MS_channel-2vv5G01 G:70-268                                                                                                                                                                            ------------- Pfam domains (1)
           Pfam domains (2) TM_helix-2vv5G09 G:25-66                  ---MS_channel-2vv5G02 G:70-268                                                                                                                                                                            ------------- Pfam domains (2)
           Pfam domains (3) TM_helix-2vv5G10 G:25-66                  ---MS_channel-2vv5G03 G:70-268                                                                                                                                                                            ------------- Pfam domains (3)
           Pfam domains (4) TM_helix-2vv5G11 G:25-66                  ---MS_channel-2vv5G04 G:70-268                                                                                                                                                                            ------------- Pfam domains (4)
           Pfam domains (5) TM_helix-2vv5G12 G:25-66                  ---MS_channel-2vv5G05 G:70-268                                                                                                                                                                            ------------- Pfam domains (5)
           Pfam domains (6) TM_helix-2vv5G13 G:25-66                  ---MS_channel-2vv5G06 G:70-268                                                                                                                                                                            ------------- Pfam domains (6)
           Pfam domains (7) TM_helix-2vv5G14 G:25-66                  ---MS_channel-2vv5G07 G:70-268                                                                                                                                                                            ------------- Pfam domains (7)
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........eee....eeeeeee...eeeee.....eeeeehhhhhh..eee.....eeeeeeeeee....hhhhhhhhhhhhhhhh........eeeeeeee....eeeeeeeeee..hhhhhhhhhhhhhhhhhhhhh......eeeeeee... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------UPF0003  PDB: G:143-177            -------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2vv5 G  25 LSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLVVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK 281
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (3, 21)

Asymmetric/Biological Unit
(-)
Class: All beta proteins (24004)
(-)
Class: Alpha and beta proteins (a+b) (23004)
(-)
Class: Membrane and cell surface proteins and peptides (2046)

(-) CATH Domains  (2, 14)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (2, 14)

Asymmetric/Biological Unit
(-)
Clan: no clan defined [family: MS_channel] (2)
(-)
Clan: no clan defined [family: TM_helix] (2)

(-) Gene Ontology  (9, 15)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G   (MSCS_ECO57 | P0C0S2)
biological process
    GO:0006811    ion transport    The directed movement of charged atoms or small charged molecules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
    GO:0055085    transmembrane transport    The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other
    GO:0006810    transport    The directed movement of substances (such as macromolecules, small molecules, ions) or cellular components (such as complexes and organelles) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter, pore or motor protein.
cellular component
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

Chain A,B,C,D,E,F,G   (MSCS_ECOLI | P0C0S1)
molecular function
    GO:0008381    mechanically-gated ion channel activity    Enables the transmembrane transfer of an ion by a channel that opens in response to a mechanical stress.
biological process
    GO:0009992    cellular water homeostasis    Any process involved in the maintenance of an internal steady state of water within a cell.
    GO:0034220    ion transmembrane transport    A process in which an ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.
    GO:0006811    ion transport    The directed movement of charged atoms or small charged molecules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
    GO:0055085    transmembrane transport    The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other
    GO:0006810    transport    The directed movement of substances (such as macromolecules, small molecules, ions) or cellular components (such as complexes and organelles) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter, pore or motor protein.
cellular component
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        MSCS_ECO57 | P0C0S2: 4age 4agf 5aji
        MSCS_ECOLI | P0C0S1: 2oau 3udc 4age 4agf 4hwa 5aji

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 2VV5)