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(-) Description

Title :  CRYSTAL STRUCTURE OF A NOVEL SM-LIKE ARCHAEAL PROTEIN FROM PYROBACULUM AEROPHILUM
 
Authors :  C. Mura, M. Phillips, A. Kozhukhovsky, D. Eisenberg
Date :  09 Jul 02  (Deposition) - 18 Mar 03  (Release) - 17 May 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.00
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,1,2
Biol. Unit 1:  A,B,C,D,E,F,G,H,I,J,K,L,M,N  (1x)
Biol. Unit 2:  O,P,Q,R,S,T,U,V,W,X,Y,Z,1,2  (1x)
Keywords :  Ob-Like Fold, B-Sheet Toroid, 14-Mer, Cadmium-Binding Site, Translation (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  C. Mura, M. Phillips, A. Kozhukhovsky, D. Eisenberg
Structure And Assembly Of An Augmented Sm-Like Archaeal Protein 14-Mer
Proc. Natl. Acad. Sci. Usa V. 100 4539 2003
PubMed-ID: 12668760  |  Reference-DOI: 10.1073/PNAS.0538042100
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - SMALL NUCLEAR RIBONUCLEOPROTEIN HOMOLOG
    ChainsA, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, 1, 2
    EngineeredYES
    Expression SystemESCHERICHIA COLI BL21(DE3)
    Expression System PlasmidPET-22B(+)
    Expression System StrainBL21(DE3)
    Expression System Taxid469008
    Expression System Vector TypePLASMID
    GeneSMAP3 GENE (PAE2122)
    Organism ScientificPYROBACULUM AEROPHILUM
    Organism Taxid13773
    SynonymSMAP3;
SM-LIKE ARCHAEAL PROTEIN (SMAP3);
SM-LIKE PROTEIN

 Structural Features

(-) Chains, Units

  12345678910111213141516171819202122232425262728
Asymmetric Unit ABCDEFGHIJKLMNOPQRSTUVWXYZ12
Biological Unit 1 (1x)ABCDEFGHIJKLMN              
Biological Unit 2 (1x)              OPQRSTUVWXYZ12

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (5, 144)

Asymmetric Unit (5, 144)
No.NameCountTypeFull Name
1ACY15Ligand/IonACETIC ACID
2CD28Ligand/IonCADMIUM ION
3GOL12Ligand/IonGLYCEROL
4MSE84Mod. Amino AcidSELENOMETHIONINE
5NA5Ligand/IonSODIUM ION
Biological Unit 1 (3, 55)
No.NameCountTypeFull Name
1ACY7Ligand/IonACETIC ACID
2CD-1Ligand/IonCADMIUM ION
3GOL6Ligand/IonGLYCEROL
4MSE42Mod. Amino AcidSELENOMETHIONINE
5NA-1Ligand/IonSODIUM ION
Biological Unit 2 (3, 56)
No.NameCountTypeFull Name
1ACY8Ligand/IonACETIC ACID
2CD-1Ligand/IonCADMIUM ION
3GOL6Ligand/IonGLYCEROL
4MSE42Mod. Amino AcidSELENOMETHIONINE
5NA-1Ligand/IonSODIUM ION

(-) Sites  (59, 59)

Asymmetric Unit (59, 59)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREHIS A:39 , HOH A:4034 , HOH A:4055 , GLU B:84 , HOH B:3008BINDING SITE FOR RESIDUE CD A 2001
02AC2SOFTWAREHIS B:39 , HOH B:3003 , GLU C:84 , HOH C:194BINDING SITE FOR RESIDUE CD B 2002
03AC3SOFTWAREHIS C:39 , HOH C:144 , HOH C:179 , GLU D:84BINDING SITE FOR RESIDUE CD D 2003
04AC4SOFTWAREHIS D:39 , HOH D:2005 , GLU E:84 , HOH E:2029BINDING SITE FOR RESIDUE CD D 2004
05AC5SOFTWAREHIS E:39 , HOH E:2008 , GLU F:84 , HOH F:5073BINDING SITE FOR RESIDUE CD E 2005
06AC6SOFTWAREHIS F:39 , HOH F:5016 , HOH F:5049 , GLU G:84 , HOH G:4044BINDING SITE FOR RESIDUE CD F 2006
07AC7SOFTWAREGLU A:84 , HIS G:39 , HOH G:4003 , HOH G:4058BINDING SITE FOR RESIDUE CD A 2007
08AC8SOFTWAREHIS H:39 , GOL H:4002 , HOH H:5061 , GLU I:15 , HOH I:5064BINDING SITE FOR RESIDUE CD H 2008
09AC9SOFTWAREHIS I:39 , HOH I:5045 , GLU J:15BINDING SITE FOR RESIDUE CD I 2009
10BC1SOFTWAREHIS J:39 , HOH J:4010 , HOH K:5019BINDING SITE FOR RESIDUE CD J 2010
11BC2SOFTWARELYS D:91 , HIS K:39 , HOH K:5020 , GLU L:15 , HOH L:2027BINDING SITE FOR RESIDUE CD K 2011
12BC3SOFTWAREHIS L:39 , HOH L:2016 , HOH L:2039 , HOH L:2058BINDING SITE FOR RESIDUE CD L 2012
13BC4SOFTWAREHIS M:39 , HOH M:5014 , HOH M:5025 , HOH M:5101BINDING SITE FOR RESIDUE CD M 2013
14BC5SOFTWAREGLU H:15 , HIS N:39 , HOH N:5038BINDING SITE FOR RESIDUE CD H 2014
15BC6SOFTWAREHIS O:39 , HOH O:2023 , HOH O:2079 , GLU P:84 , HOH P:2057BINDING SITE FOR RESIDUE CD P 2015
16BC7SOFTWAREHIS P:39 , HOH P:2025 , GLU Q:84 , HOH Q:2027BINDING SITE FOR RESIDUE CD P 2016
17BC8SOFTWAREHIS Q:39 , HOH Q:2018 , GLU R:84 , HOH R:4026BINDING SITE FOR RESIDUE CD Q 2017
18BC9SOFTWAREHIS R:39 , HOH R:4013 , HOH R:4050 , GLU S:84BINDING SITE FOR RESIDUE CD R 2018
19CC1SOFTWAREHIS S:39 , HOH S:3023 , HOH S:3034 , GLU T:84 , HOH T:184BINDING SITE FOR RESIDUE CD S 2019
20CC2SOFTWAREHIS T:39 , HOH T:142 , HOH T:153 , GLU U:84 , HOH U:2062BINDING SITE FOR RESIDUE CD U 2020
21CC3SOFTWAREGLU O:84 , HIS U:39 , HOH U:2027BINDING SITE FOR RESIDUE CD O 2021
22CC4SOFTWAREHIS V:39 , HOH V:5028 , HOH V:5041 , HOH V:5113 , HOH V:5122BINDING SITE FOR RESIDUE CD V 2022
23CC5SOFTWAREHIS W:39 , HOH W:5056 , HOH W:5057 , HOH W:5076 , HOH W:5081BINDING SITE FOR RESIDUE CD W 2023
24CC6SOFTWAREHIS X:39 , HOH X:5036 , HOH X:5070 , HOH X:5095BINDING SITE FOR RESIDUE CD X 2024
25CC7SOFTWAREHIS Y:39 , HOH Y:5085 , GLU Z:15 , HOH Z:5060BINDING SITE FOR RESIDUE CD Y 2025
26CC8SOFTWAREHIS Z:39 , HOH Z:5031 , HOH Z:5042 , HOH Z:5057BINDING SITE FOR RESIDUE CD Z 2026
27CC9SOFTWAREHIS 1:39 , GLU 2:15 , HOH R:4021BINDING SITE FOR RESIDUE CD 1 2027
28DC1SOFTWAREHIS 2:39 , HOH 2:5049 , HOH Q:2034 , GLU V:15BINDING SITE FOR RESIDUE CD 2 2028
29DC2SOFTWAREGLU B:58 , LYS C:55BINDING SITE FOR RESIDUE NA B 3001
30DC3SOFTWAREHOH R:4056BINDING SITE FOR RESIDUE NA S 3002
31DC4SOFTWAREHOH V:5062 , HOH V:5089BINDING SITE FOR RESIDUE NA V 3003
32DC5SOFTWAREHOH Q:2076BINDING SITE FOR RESIDUE NA R 3005
33DC6SOFTWAREALA G:86 , GLU G:90 , VAL G:97 , HOH G:4011 , HOH G:4048 , GLY H:21 , HIS H:39 , ALA H:50BINDING SITE FOR RESIDUE GOL G 4001
34DC7SOFTWAREGLU G:90 , HIS H:39 , ASN H:61 , ARG H:62 , CD H:2008 , HOH H:5023 , HOH H:5034 , ARG I:79BINDING SITE FOR RESIDUE GOL H 4002
35DC8SOFTWAREGLU M:32 , GLU M:58 , PHE M:60 , HOH M:5053 , GLN N:25 , HOH N:5062BINDING SITE FOR RESIDUE GOL M 4003
36DC9SOFTWAREGLU O:90 , HOH O:2049 , ALA W:50 , ASN W:61 , ARG W:62 , ARG X:79 , GLU X:116 , HOH X:5024 , HOH X:5045BINDING SITE FOR RESIDUE GOL X 4004
37EC1SOFTWAREGLU J:58 , PHE J:60 , GLN K:25 , LYS K:55BINDING SITE FOR RESIDUE GOL J 4005
38EC2SOFTWAREGLU W:32 , GLU W:58 , HOH W:5045 , HOH W:5074 , GLN X:25 , VAL X:33 , LYS X:55BINDING SITE FOR RESIDUE GOL W 4006
39EC3SOFTWAREASN 1:61 , ARG 1:62 , ARG 2:79 , GLU 2:116 , GLU R:90 , GLY R:95 , HOH R:4021 , HOH R:4022BINDING SITE FOR RESIDUE GOL R 4007
40EC4SOFTWAREGLU P:90 , PRO P:94 , HOH P:2073 , HIS V:39 , ASN V:61 , ARG V:62 , HOH V:5104 , ARG W:79 , GLU W:116 , HOH W:5096BINDING SITE FOR RESIDUE GOL V 4008
41EC5SOFTWAREGLU 2:32 , GLU 2:58 , PHE 2:60 , GLN V:25 , VAL V:33BINDING SITE FOR RESIDUE GOL 2 4009
42EC6SOFTWAREGLU 1:32 , TYR 1:34 , GLU 1:58 , PHE 1:60 , GLN 2:25 , LYS 2:55 , HOH 2:5070BINDING SITE FOR RESIDUE GOL 1 4010
43EC7SOFTWAREGLU H:32 , GLU H:58 , GLN I:25 , LYS I:55BINDING SITE FOR RESIDUE GOL H 4011
44EC8SOFTWAREGLU A:32 , GLU A:58 , PHE A:60 , GLN B:25 , VAL B:33BINDING SITE FOR RESIDUE GOL A 4012
45EC9SOFTWAREPHE P:93 , ARG P:128 , THR W:103 , VAL W:105 , ARG W:113BINDING SITE FOR RESIDUE ACY W 5001
46FC1SOFTWAREPHE O:93 , ARG O:128 , THR X:103 , VAL X:105 , ARG X:113BINDING SITE FOR RESIDUE ACY X 5002
47FC2SOFTWAREPHE C:93 , ARG C:128 , THR M:103 , VAL M:105 , ARG M:113 , HOH M:5030BINDING SITE FOR RESIDUE ACY M 5003
48FC3SOFTWAREGLU I:23 , SER I:75 , THR I:76 , GLU I:77BINDING SITE FOR RESIDUE ACY I 5004
49FC4SOFTWAREILE 2:100 , THR 2:103 , VAL 2:105 , ARG 2:113 , PHE R:93 , VAL R:125 , ARG R:128BINDING SITE FOR RESIDUE ACY 2 5005
50FC5SOFTWAREPHE T:93 , PRO T:124 , THR Z:103 , VAL Z:105 , ARG Z:113BINDING SITE FOR RESIDUE ACY Z 5006
51FC6SOFTWAREPHE Q:93 , VAL Q:125 , THR V:103 , VAL V:105 , ARG V:113 , HOH V:5020BINDING SITE FOR RESIDUE ACY V 5007
52FC7SOFTWAREPHE U:93 , VAL U:125 , ARG U:128 , THR Y:103 , ARG Y:113 , HOH Y:5025BINDING SITE FOR RESIDUE ACY Y 5008
53FC8SOFTWAREPHE B:93 , ARG B:128 , ILE N:100 , THR N:103 , VAL N:105 , ARG N:113 , HOH N:5070BINDING SITE FOR RESIDUE ACY N 5009
54FC9SOFTWAREPHE G:93 , VAL G:125 , ARG G:128 , ILE I:100 , THR I:103 , VAL I:105 , ARG I:113 , HOH I:5066BINDING SITE FOR RESIDUE ACY I 5010
55GC1SOFTWARELEU W:19 , GLU W:23 , SER W:75 , THR W:76 , GLU W:77 , HOH W:5031 , HOH W:5046BINDING SITE FOR RESIDUE ACY W 5011
56GC2SOFTWAREPHE A:93 , ARG A:128 , ILE H:100 , THR H:103 , VAL H:105 , ARG H:113 , HOH H:5070BINDING SITE FOR RESIDUE ACY H 5012
57GC3SOFTWAREPHE E:93 , VAL E:125 , ARG E:128 , ILE K:100 , THR K:103 , VAL K:105 , ARG K:113 , HOH K:5049BINDING SITE FOR RESIDUE ACY K 5013
58GC4SOFTWAREILE 1:100 , THR 1:103 , VAL 1:105 , ARG 1:113 , HOH 1:5048 , PHE S:93BINDING SITE FOR RESIDUE ACY 1 5014
59GC5SOFTWAREGLU F:32 , GLU F:58 , GLN G:25BINDING SITE FOR RESIDUE ACY F 5015

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1M5Q)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1M5Q)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1M5Q)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1M5Q)

(-) Exons   (0, 0)

(no "Exon" information available for 1M5Q)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain 1 from PDB  Type:PROTEIN  Length:127
 aligned with Q8ZVU2_PYRAE | Q8ZVU2 from UniProtKB/TrEMBL  Length:144

    Alignment length:127
                                    21        31        41        51        61        71        81        91       101       111       121       131       
         Q8ZVU2_PYRAE    12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFIMYRYIVHIDSTERRIDMREFAKQAEKIFPGMVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLK 138
               SCOP domains d1m5q1_ 1: Sm-Like archaeal protein Smap3                                                                                       SCOP domains
               CATH domains 1m5q101 1:12-79  [code=2.30.30.100, no name defined]                1m5q102 1:80-137                                          - CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhh....eeeeee....eeeeeeeee.....eeeeeeee....eeeeeee....eeeeee.....hhhhhhhhhhhhh...eeee....eeee...eeee..eee..hhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1m5q 1  12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFImYRYIVHIDSTERRIDmREFAKQAEKIFPGmVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLK 138
                                    21        31        41        51        61    |   71        81|       91    |  101       111       121       131       
                                                                                 66-MSE          82-MSE        96-MSE                                      

Chain 2 from PDB  Type:PROTEIN  Length:127
 aligned with Q8ZVU2_PYRAE | Q8ZVU2 from UniProtKB/TrEMBL  Length:144

    Alignment length:127
                                    21        31        41        51        61        71        81        91       101       111       121       131       
         Q8ZVU2_PYRAE    12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFIMYRYIVHIDSTERRIDMREFAKQAEKIFPGMVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLK 138
               SCOP domains d1m5q2_ 2: Sm-Like archaeal protein Smap3                                                                                       SCOP domains
               CATH domains 1m5q201 2:12-79  [code=2.30.30.100, no name defined]                1m5q202 2:80-137                                          - CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhh....eeeeee....eeeeeeeee.....eeeeeee.....eeeeeee....eeeeee.....hhhhhhhhhhhhh...eeee....eeee...eeee..eee.hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1m5q 2  12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFImYRYIVHIDSTERRIDmREFAKQAEKIFPGmVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLK 138
                                    21        31        41        51        61    |   71        81|       91    |  101       111       121       131       
                                                                                 66-MSE          82-MSE        96-MSE                                      

Chain A from PDB  Type:PROTEIN  Length:126
 aligned with Q8ZVU2_PYRAE | Q8ZVU2 from UniProtKB/TrEMBL  Length:144

    Alignment length:126
                                    21        31        41        51        61        71        81        91       101       111       121       131      
         Q8ZVU2_PYRAE    12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFIMYRYIVHIDSTERRIDMREFAKQAEKIFPGMVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFL 137
               SCOP domains d1m5qa_ A: Sm-Like archaeal protein Smap3                                                                                      SCOP domains
               CATH domains 1m5qA01 A:12-79  [code=2.30.30.100, no name defined]                1m5qA02 A:80-135                                        -- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhh...eeeeee....eeeeeeeee.....eeeeeee.....eeeeeee....eeeeee.....hhhhhhhhhhhhh...eeee....eeee...eeee..eee..hhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1m5q A  12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFImYRYIVHIDSTERRIDmREFAKQAEKIFPGmVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFL 137
                                    21        31        41        51        61    |   71        81|       91    |  101       111       121       131      
                                                                                 66-MSE          82-MSE        96-MSE                                     

Chain B from PDB  Type:PROTEIN  Length:127
 aligned with Q8ZVU2_PYRAE | Q8ZVU2 from UniProtKB/TrEMBL  Length:144

    Alignment length:127
                                    21        31        41        51        61        71        81        91       101       111       121       131       
         Q8ZVU2_PYRAE    12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFIMYRYIVHIDSTERRIDMREFAKQAEKIFPGMVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLK 138
               SCOP domains d1m5qb_ B: Sm-Like archaeal protein Smap3                                                                                       SCOP domains
               CATH domains 1m5qB01 B:12-78  [code=2.30.30.100, no name defined]               1m5qB02 B:79-135                                         --- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhh....eeeeee....eeeeeeeee.....eeeeeeee....eeeeeee....eeeeee.....hhhhhhhhhhhhh...eeee....eeee...eeee..eee..hhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1m5q B  12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFImYRYIVHIDSTERRIDmREFAKQAEKIFPGmVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLK 138
                                    21        31        41        51        61    |   71        81|       91    |  101       111       121       131       
                                                                                 66-MSE          82-MSE        96-MSE                                      

Chain C from PDB  Type:PROTEIN  Length:127
 aligned with Q8ZVU2_PYRAE | Q8ZVU2 from UniProtKB/TrEMBL  Length:144

    Alignment length:127
                                    21        31        41        51        61        71        81        91       101       111       121       131       
         Q8ZVU2_PYRAE    12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFIMYRYIVHIDSTERRIDMREFAKQAEKIFPGMVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLK 138
               SCOP domains d1m5qc_ C: Sm-Like archaeal protein Smap3                                                                                       SCOP domains
               CATH domains 1m5qC01 C:12-78  [code=2.30.30.100, no name defined]               1m5qC02 C:79-137                                           - CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhh....eeeeee....eeeeeeeee.....eeeeeee.....eeeeeee....eeeeee.....hhhhhhhhhhhhh...eeee....eeee...eeee..eee.hhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1m5q C  12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFImYRYIVHIDSTERRIDmREFAKQAEKIFPGmVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLK 138
                                    21        31        41        51        61    |   71        81|       91    |  101       111       121       131       
                                                                                 66-MSE          82-MSE        96-MSE                                      

Chain D from PDB  Type:PROTEIN  Length:127
 aligned with Q8ZVU2_PYRAE | Q8ZVU2 from UniProtKB/TrEMBL  Length:144

    Alignment length:127
                                    21        31        41        51        61        71        81        91       101       111       121       131       
         Q8ZVU2_PYRAE    12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFIMYRYIVHIDSTERRIDMREFAKQAEKIFPGMVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLK 138
               SCOP domains d1m5qd_ D: Sm-Like archaeal protein Smap3                                                                                       SCOP domains
               CATH domains 1m5qD01 D:12-79  [code=2.30.30.100, no name defined]                1m5qD02 D:80-135                                        --- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhh...eeeeee....eeeeeeeee.....eeeeeee.....eeeeeee....eeeeee.....hhhhhhhhhhhhh...eeee....eeee...eeee..eee.hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1m5q D  12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFImYRYIVHIDSTERRIDmREFAKQAEKIFPGmVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLK 138
                                    21        31        41        51        61    |   71        81|       91    |  101       111       121       131       
                                                                                 66-MSE          82-MSE        96-MSE                                      

Chain E from PDB  Type:PROTEIN  Length:127
 aligned with Q8ZVU2_PYRAE | Q8ZVU2 from UniProtKB/TrEMBL  Length:144

    Alignment length:127
                                    21        31        41        51        61        71        81        91       101       111       121       131       
         Q8ZVU2_PYRAE    12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFIMYRYIVHIDSTERRIDMREFAKQAEKIFPGMVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLK 138
               SCOP domains d1m5qe_ E: Sm-Like archaeal protein Smap3                                                                                       SCOP domains
               CATH domains 1m5qE01 E:12-78  [code=2.30.30.100, no name defined]               1m5qE02 E:79-135                                         --- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhh...eeeeee....eeeeeeeee.....eeeeeee.....eeeeeee....eeeeee.....hhhhhhhhhhhhh...eeee....eeee...eee....ee.hhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1m5q E  12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFImYRYIVHIDSTERRIDmREFAKQAEKIFPGmVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLK 138
                                    21        31        41        51        61    |   71        81|       91    |  101       111       121       131       
                                                                                 66-MSE          82-MSE        96-MSE                                      

Chain F from PDB  Type:PROTEIN  Length:127
 aligned with Q8ZVU2_PYRAE | Q8ZVU2 from UniProtKB/TrEMBL  Length:144

    Alignment length:127
                                    21        31        41        51        61        71        81        91       101       111       121       131       
         Q8ZVU2_PYRAE    12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFIMYRYIVHIDSTERRIDMREFAKQAEKIFPGMVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLK 138
               SCOP domains d1m5qf_ F: Sm-Like archaeal protein Smap3                                                                                       SCOP domains
               CATH domains 1m5qF01 F:12-78  [code=2.30.30.100, no name defined]               1m5qF02 F:79-135                                         --- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhh...eeeeee....eeeeeeeee.....eeeeeeee....eeeeeee....eeeeee.....hhhhhhhhhhhhh...eeee....eeee...eeee..eee..hhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1m5q F  12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFImYRYIVHIDSTERRIDmREFAKQAEKIFPGmVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLK 138
                                    21        31        41        51        61    |   71        81|       91    |  101       111       121       131       
                                                                                 66-MSE          82-MSE        96-MSE                                      

Chain G from PDB  Type:PROTEIN  Length:127
 aligned with Q8ZVU2_PYRAE | Q8ZVU2 from UniProtKB/TrEMBL  Length:144

    Alignment length:127
                                    21        31        41        51        61        71        81        91       101       111       121       131       
         Q8ZVU2_PYRAE    12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFIMYRYIVHIDSTERRIDMREFAKQAEKIFPGMVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLK 138
               SCOP domains d1m5qg_ G: Sm-Like archaeal protein Smap3                                                                                       SCOP domains
               CATH domains 1m5qG01 G:12-78  [code=2.30.30.100, no name defined]               1m5qG02 G:79-135                                         --- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhh....eeeeee....eeeeeeeee.....eeeeeee.....eeeeeee....eeeeee.....hhhhhhhhhhhhh...eeee....eeee...eeee..eee..hhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1m5q G  12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFImYRYIVHIDSTERRIDmREFAKQAEKIFPGmVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLK 138
                                    21        31        41        51        61    |   71        81|       91    |  101       111       121       131       
                                                                                 66-MSE          82-MSE        96-MSE                                      

Chain H from PDB  Type:PROTEIN  Length:128
 aligned with Q8ZVU2_PYRAE | Q8ZVU2 from UniProtKB/TrEMBL  Length:144

    Alignment length:128
                                    21        31        41        51        61        71        81        91       101       111       121       131        
         Q8ZVU2_PYRAE    12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFIMYRYIVHIDSTERRIDMREFAKQAEKIFPGMVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLKR 139
               SCOP domains d1m5qh_ H: Sm-Like archaeal protein Smap3                                                                                        SCOP domains
               CATH domains 1m5qH01 H:12-79  [code=2.30.30.100, no name defined]                1m5qH02 H:80-137                                          -- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhh....eeeeee....eeeeeeeee.....eeeeeee.....eeeeeee....eeeeee.....hhhhhhhhhhhhh...eeee....eeee...eeee..eee..hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1m5q H  12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFImYRYIVHIDSTERRIDmREFAKQAEKIFPGmVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLKR 139
                                    21        31        41        51        61    |   71        81|       91    |  101       111       121       131        
                                                                                 66-MSE          82-MSE        96-MSE                                       

Chain I from PDB  Type:PROTEIN  Length:128
 aligned with Q8ZVU2_PYRAE | Q8ZVU2 from UniProtKB/TrEMBL  Length:144

    Alignment length:128
                                    21        31        41        51        61        71        81        91       101       111       121       131        
         Q8ZVU2_PYRAE    12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFIMYRYIVHIDSTERRIDMREFAKQAEKIFPGMVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLKR 139
               SCOP domains d1m5qi_ I: Sm-Like archaeal protein Smap3                                                                                        SCOP domains
               CATH domains 1m5qI01 I:12-79  [code=2.30.30.100, no name defined]                1m5qI02 I:80-137                                          -- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhh....eeeeee....eeeeeeeee.....eeeeeeee....eeeeeee....eeeeee.....hhhhhhhhhhhhh...eeee....eeee...eeee..eee..hhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1m5q I  12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFImYRYIVHIDSTERRIDmREFAKQAEKIFPGmVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLKR 139
                                    21        31        41        51        61    |   71        81|       91    |  101       111       121       131        
                                                                                 66-MSE          82-MSE        96-MSE                                       

Chain J from PDB  Type:PROTEIN  Length:128
 aligned with Q8ZVU2_PYRAE | Q8ZVU2 from UniProtKB/TrEMBL  Length:144

    Alignment length:128
                                    21        31        41        51        61        71        81        91       101       111       121       131        
         Q8ZVU2_PYRAE    12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFIMYRYIVHIDSTERRIDMREFAKQAEKIFPGMVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLKR 139
               SCOP domains d1m5qj_ J: Sm-Like archaeal protein Smap3                                                                                        SCOP domains
               CATH domains 1m5qJ01 J:12-79  [code=2.30.30.100, no name defined]                1m5qJ02 J:80-137                                          -- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhh....eeeeee....eeeeeeeee.....eeeeeee.....eeeeeee....eeeeee.....hhhhhhhhhhhhh...eeee....eeee...eeee..eee..hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1m5q J  12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFImYRYIVHIDSTERRIDmREFAKQAEKIFPGmVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLKR 139
                                    21        31        41        51        61    |   71        81|       91    |  101       111       121       131        
                                                                                 66-MSE          82-MSE        96-MSE                                       

Chain K from PDB  Type:PROTEIN  Length:128
 aligned with Q8ZVU2_PYRAE | Q8ZVU2 from UniProtKB/TrEMBL  Length:144

    Alignment length:128
                                    21        31        41        51        61        71        81        91       101       111       121       131        
         Q8ZVU2_PYRAE    12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFIMYRYIVHIDSTERRIDMREFAKQAEKIFPGMVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLKR 139
               SCOP domains d1m5qk_ K: Sm-Like archaeal protein Smap3                                                                                        SCOP domains
               CATH domains 1m5qK01 K:12-79  [code=2.30.30.100, no name defined]                1m5qK02 K:80-137                                          -- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhh....eeeeee....eeeeeeeee.....eeeeeeee....eeeeeee....eeeeee.....hhhhhhhhhhh.....eeee....eeee...eeee..eee..hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1m5q K  12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFImYRYIVHIDSTERRIDmREFAKQAEKIFPGmVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLKR 139
                                    21        31        41        51        61    |   71        81|       91    |  101       111       121       131        
                                                                                 66-MSE          82-MSE        96-MSE                                       

Chain L from PDB  Type:PROTEIN  Length:127
 aligned with Q8ZVU2_PYRAE | Q8ZVU2 from UniProtKB/TrEMBL  Length:144

    Alignment length:127
                                    21        31        41        51        61        71        81        91       101       111       121       131       
         Q8ZVU2_PYRAE    12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFIMYRYIVHIDSTERRIDMREFAKQAEKIFPGMVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLK 138
               SCOP domains d1m5ql_ L: Sm-Like archaeal protein Smap3                                                                                       SCOP domains
               CATH domains 1m5qL01 L:12-79  [code=2.30.30.100, no name defined]                1m5qL02 L:80-137                                          - CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhh....eeeeee....eeeeeeeee.....eeeeeee.....eeeeeee....eeeeee.....hhhhhhhhhhhhh...eeee....eeee...eeee..eee..hhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1m5q L  12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFImYRYIVHIDSTERRIDmREFAKQAEKIFPGmVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLK 138
                                    21        31        41        51        61    |   71        81|       91    |  101       111       121       131       
                                                                                 66-MSE          82-MSE        96-MSE                                      

Chain M from PDB  Type:PROTEIN  Length:128
 aligned with Q8ZVU2_PYRAE | Q8ZVU2 from UniProtKB/TrEMBL  Length:144

    Alignment length:128
                                    21        31        41        51        61        71        81        91       101       111       121       131        
         Q8ZVU2_PYRAE    12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFIMYRYIVHIDSTERRIDMREFAKQAEKIFPGMVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLKR 139
               SCOP domains d1m5qm_ M: Sm-Like archaeal protein Smap3                                                                                        SCOP domains
               CATH domains 1m5qM01 M:12-79  [code=2.30.30.100, no name defined]                1m5qM02 M:80-137                                          -- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhh....eeeeee....eeeeeeeee.....eeeeeee.....eeeeeee....eeeeee.....hhhhhhhhhhhhh...eeee....eeee...eeee..eee..hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1m5q M  12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFImYRYIVHIDSTERRIDmREFAKQAEKIFPGmVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLKR 139
                                    21        31        41        51        61    |   71        81|       91    |  101       111       121       131        
                                                                                 66-MSE          82-MSE        96-MSE                                       

Chain N from PDB  Type:PROTEIN  Length:128
 aligned with Q8ZVU2_PYRAE | Q8ZVU2 from UniProtKB/TrEMBL  Length:144

    Alignment length:128
                                    21        31        41        51        61        71        81        91       101       111       121       131        
         Q8ZVU2_PYRAE    12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFIMYRYIVHIDSTERRIDMREFAKQAEKIFPGMVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLKR 139
               SCOP domains d1m5qn_ N: Sm-Like archaeal protein Smap3                                                                                        SCOP domains
               CATH domains 1m5qN01 N:12-79  [code=2.30.30.100, no name defined]                1m5qN02 N:80-137                                          -- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhh....eeeeee....eeeeeeeee.....eeeeeee.....eeeeeee....eeeeee.....hhhhhhhhhhhhh...eeee....eeee...eeee..eee..hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1m5q N  12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFImYRYIVHIDSTERRIDmREFAKQAEKIFPGmVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLKR 139
                                    21        31        41        51        61    |   71        81|       91    |  101       111       121       131        
                                                                                 66-MSE          82-MSE        96-MSE                                       

Chain O from PDB  Type:PROTEIN  Length:127
 aligned with Q8ZVU2_PYRAE | Q8ZVU2 from UniProtKB/TrEMBL  Length:144

    Alignment length:127
                                    21        31        41        51        61        71        81        91       101       111       121       131       
         Q8ZVU2_PYRAE    12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFIMYRYIVHIDSTERRIDMREFAKQAEKIFPGMVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLK 138
               SCOP domains d1m5qo_ O: Sm-Like archaeal protein Smap3                                                                                       SCOP domains
               CATH domains 1m5qO01 O:12-78  [code=2.30.30.100, no name defined]               1m5qO02 O:79-135                                         --- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhh...eeeeee....eeeeeeeee.....eeeeeee.....eeeeeee....eeeeee.....hhhhhhhhhhhhh...eeee....eeee...eeee..eee..hhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1m5q O  12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFImYRYIVHIDSTERRIDmREFAKQAEKIFPGmVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLK 138
                                    21        31        41        51        61    |   71        81|       91    |  101       111       121       131       
                                                                                 66-MSE          82-MSE        96-MSE                                      

Chain P from PDB  Type:PROTEIN  Length:127
 aligned with Q8ZVU2_PYRAE | Q8ZVU2 from UniProtKB/TrEMBL  Length:144

    Alignment length:127
                                    21        31        41        51        61        71        81        91       101       111       121       131       
         Q8ZVU2_PYRAE    12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFIMYRYIVHIDSTERRIDMREFAKQAEKIFPGMVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLK 138
               SCOP domains d1m5qp_ P: Sm-Like archaeal protein Smap3                                                                                       SCOP domains
               CATH domains 1m5qP01 P:12-78  [code=2.30.30.100, no name defined]               1m5qP02 P:79-135                                         --- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhh....eeeeee....eeeeeeeee.....eeeeeeee....eeeeeee....eeeeee.....hhhhhhhhhhh.....eeee....eeee...eeee..eee..hhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1m5q P  12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFImYRYIVHIDSTERRIDmREFAKQAEKIFPGmVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLK 138
                                    21        31        41        51        61    |   71        81|       91    |  101       111       121       131       
                                                                                 66-MSE          82-MSE        96-MSE                                      

Chain Q from PDB  Type:PROTEIN  Length:127
 aligned with Q8ZVU2_PYRAE | Q8ZVU2 from UniProtKB/TrEMBL  Length:144

    Alignment length:127
                                    21        31        41        51        61        71        81        91       101       111       121       131       
         Q8ZVU2_PYRAE    12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFIMYRYIVHIDSTERRIDMREFAKQAEKIFPGMVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLK 138
               SCOP domains d1m5qq_ Q: Sm-Like archaeal protein Smap3                                                                                       SCOP domains
               CATH domains 1m5qQ01 Q:12-78  [code=2.30.30.100, no name defined]               1m5qQ02 Q:79-135                                         --- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhh....eeeeee....eeeeeeeee.....eeeeeeee....eeeeeee....eeeeee.....hhhhhhhhhhhhh...eeee....eeee...eeee..eee..hhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1m5q Q  12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFImYRYIVHIDSTERRIDmREFAKQAEKIFPGmVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLK 138
                                    21        31        41        51        61    |   71        81|       91    |  101       111       121       131       
                                                                                 66-MSE          82-MSE        96-MSE                                      

Chain R from PDB  Type:PROTEIN  Length:127
 aligned with Q8ZVU2_PYRAE | Q8ZVU2 from UniProtKB/TrEMBL  Length:144

    Alignment length:127
                                    21        31        41        51        61        71        81        91       101       111       121       131       
         Q8ZVU2_PYRAE    12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFIMYRYIVHIDSTERRIDMREFAKQAEKIFPGMVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLK 138
               SCOP domains d1m5qr_ R: Sm-Like archaeal protein Smap3                                                                                       SCOP domains
               CATH domains 1m5qR01 R:12-78  [code=2.30.30.100, no name defined]               1m5qR02 R:79-135                                         --- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhh....eeeeee....eeeeeeeee.....eeeeeee.....eeeeeee....eeeeee.....hhhhhhhhhhhhh...eeee....eeee...eeee..eee..hhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1m5q R  12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFImYRYIVHIDSTERRIDmREFAKQAEKIFPGmVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLK 138
                                    21        31        41        51        61    |   71        81|       91    |  101       111       121       131       
                                                                                 66-MSE          82-MSE        96-MSE                                      

Chain S from PDB  Type:PROTEIN  Length:127
 aligned with Q8ZVU2_PYRAE | Q8ZVU2 from UniProtKB/TrEMBL  Length:144

    Alignment length:127
                                    21        31        41        51        61        71        81        91       101       111       121       131       
         Q8ZVU2_PYRAE    12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFIMYRYIVHIDSTERRIDMREFAKQAEKIFPGMVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLK 138
               SCOP domains d1m5qs_ S: Sm-Like archaeal protein Smap3                                                                                       SCOP domains
               CATH domains 1m5qS01 S:12-78  [code=2.30.30.100, no name defined]               1m5qS02 S:79-135                                         --- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhh...eeeeee....eeeeeeeee.....eeeeeeee....eeeeeee....eeeeee.....hhhhhhhhhhh.....eeee....eeee...eeee..eee.hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1m5q S  12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFImYRYIVHIDSTERRIDmREFAKQAEKIFPGmVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLK 138
                                    21        31        41        51        61    |   71        81|       91    |  101       111       121       131       
                                                                                 66-MSE          82-MSE        96-MSE                                      

Chain T from PDB  Type:PROTEIN  Length:127
 aligned with Q8ZVU2_PYRAE | Q8ZVU2 from UniProtKB/TrEMBL  Length:144

    Alignment length:127
                                    21        31        41        51        61        71        81        91       101       111       121       131       
         Q8ZVU2_PYRAE    12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFIMYRYIVHIDSTERRIDMREFAKQAEKIFPGMVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLK 138
               SCOP domains d1m5qt_ T: Sm-Like archaeal protein Smap3                                                                                       SCOP domains
               CATH domains 1m5qT01 T:12-78  [code=2.30.30.100, no name defined]               1m5qT02 T:79-135                                         --- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhh...eeeeee....eeeeeeeee.....eeeeeee.....eeeeeee....eeeeee.....hhhhhhhhhhhhh...eeee....eeee...eeee..eee.hhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1m5q T  12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFImYRYIVHIDSTERRIDmREFAKQAEKIFPGmVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLK 138
                                    21        31        41        51        61    |   71        81|       91    |  101       111       121       131       
                                                                                 66-MSE          82-MSE        96-MSE                                      

Chain U from PDB  Type:PROTEIN  Length:127
 aligned with Q8ZVU2_PYRAE | Q8ZVU2 from UniProtKB/TrEMBL  Length:144

    Alignment length:127
                                    21        31        41        51        61        71        81        91       101       111       121       131       
         Q8ZVU2_PYRAE    12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFIMYRYIVHIDSTERRIDMREFAKQAEKIFPGMVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLK 138
               SCOP domains d1m5qu_ U: Sm-Like archaeal protein Smap3                                                                                       SCOP domains
               CATH domains 1m5qU01 U:12-78  [code=2.30.30.100, no name defined]               1m5qU02 U:79-135                                         --- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhh...eeeeee....eeeeeeeee.....eeeeeeee....eeeeeee....eeeeee.....hhhhhhhhhhhhh...eeee....eeee...eeee..eee..hhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1m5q U  12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFImYRYIVHIDSTERRIDmREFAKQAEKIFPGmVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLK 138
                                    21        31        41        51        61    |   71        81|       91    |  101       111       121       131       
                                                                                 66-MSE          82-MSE        96-MSE                                      

Chain V from PDB  Type:PROTEIN  Length:128
 aligned with Q8ZVU2_PYRAE | Q8ZVU2 from UniProtKB/TrEMBL  Length:144

    Alignment length:128
                                    21        31        41        51        61        71        81        91       101       111       121       131        
         Q8ZVU2_PYRAE    12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFIMYRYIVHIDSTERRIDMREFAKQAEKIFPGMVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLKR 139
               SCOP domains d1m5qv_ V: Sm-Like archaeal protein Smap3                                                                                        SCOP domains
               CATH domains 1m5qV01 V:12-79  [code=2.30.30.100, no name defined]                1m5qV02 V:80-137                                          -- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhh....eeeeee....eeeeeeeee.....eeeeeee.....eeeeeee....eeeeee.....hhhhhhhhhhhhh...eeee....eeee...eeee..eee..hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1m5q V  12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFImYRYIVHIDSTERRIDmREFAKQAEKIFPGmVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLKR 139
                                    21        31        41        51        61    |   71        81|       91    |  101       111       121       131        
                                                                                 66-MSE          82-MSE        96-MSE                                       

Chain W from PDB  Type:PROTEIN  Length:128
 aligned with Q8ZVU2_PYRAE | Q8ZVU2 from UniProtKB/TrEMBL  Length:144

    Alignment length:128
                                    21        31        41        51        61        71        81        91       101       111       121       131        
         Q8ZVU2_PYRAE    12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFIMYRYIVHIDSTERRIDMREFAKQAEKIFPGMVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLKR 139
               SCOP domains d1m5qw_ W: Sm-Like archaeal protein Smap3                                                                                        SCOP domains
               CATH domains 1m5qW01 W:12-79  [code=2.30.30.100, no name defined]                1m5qW02 W:80-137                                          -- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhh....eeeeee....eeeeeeeee.....eeeeeee.....eeeeeee....eeeeee.....hhhhhhhhhhhhh...eeee....eeee...eeee..eee..hhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1m5q W  12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFImYRYIVHIDSTERRIDmREFAKQAEKIFPGmVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLKR 139
                                    21        31        41        51        61    |   71        81|       91    |  101       111       121       131        
                                                                                 66-MSE          82-MSE        96-MSE                                       

Chain X from PDB  Type:PROTEIN  Length:128
 aligned with Q8ZVU2_PYRAE | Q8ZVU2 from UniProtKB/TrEMBL  Length:144

    Alignment length:128
                                    21        31        41        51        61        71        81        91       101       111       121       131        
         Q8ZVU2_PYRAE    12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFIMYRYIVHIDSTERRIDMREFAKQAEKIFPGMVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLKR 139
               SCOP domains d1m5qx_ X: Sm-Like archaeal protein Smap3                                                                                        SCOP domains
               CATH domains 1m5qX01 X:12-79  [code=2.30.30.100, no name defined]                1m5qX02 X:80-137                                          -- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhh....eeeeee....eeeeeeeee.....eeeeeee.....eeeeeee....eeeeee.....hhhhhhhhhhhhh...eeee....eeee...eeee..eee..hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1m5q X  12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFImYRYIVHIDSTERRIDmREFAKQAEKIFPGmVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLKR 139
                                    21        31        41        51        61    |   71        81|       91    |  101       111       121       131        
                                                                                 66-MSE          82-MSE        96-MSE                                       

Chain Y from PDB  Type:PROTEIN  Length:128
 aligned with Q8ZVU2_PYRAE | Q8ZVU2 from UniProtKB/TrEMBL  Length:144

    Alignment length:128
                                    21        31        41        51        61        71        81        91       101       111       121       131        
         Q8ZVU2_PYRAE    12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFIMYRYIVHIDSTERRIDMREFAKQAEKIFPGMVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLKR 139
               SCOP domains d1m5qy_ Y: Sm-Like archaeal protein Smap3                                                                                        SCOP domains
               CATH domains 1m5qY01 Y:12-79  [code=2.30.30.100, no name defined]                1m5qY02 Y:80-137                                          -- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhh....eeeeee....eeeeeeeee.....eeeeeee.....eeeeeee....eeeeee.....hhhhhhhhhhhhh...eeee....eeee...eeee..eee..hhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1m5q Y  12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFImYRYIVHIDSTERRIDmREFAKQAEKIFPGmVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLKR 139
                                    21        31        41        51        61    |   71        81|       91    |  101       111       121       131        
                                                                                 66-MSE          82-MSE        96-MSE                                       

Chain Z from PDB  Type:PROTEIN  Length:128
 aligned with Q8ZVU2_PYRAE | Q8ZVU2 from UniProtKB/TrEMBL  Length:144

    Alignment length:128
                                    21        31        41        51        61        71        81        91       101       111       121       131        
         Q8ZVU2_PYRAE    12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFIMYRYIVHIDSTERRIDMREFAKQAEKIFPGMVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLKR 139
               SCOP domains d1m5qz_ Z: Sm-Like archaeal protein Smap3                                                                                        SCOP domains
               CATH domains 1m5qZ01 Z:12-79  [code=2.30.30.100, no name defined]                1m5qZ02 Z:80-137                                          -- CATH domains
           Pfam domains (1) SM-ATX-1m5qZ01 Z:12-93                                                            ---------------------------------------------- Pfam domains (1)
           Pfam domains (2) SM-ATX-1m5qZ02 Z:12-93                                                            ---------------------------------------------- Pfam domains (2)
           Pfam domains (3) SM-ATX-1m5qZ03 Z:12-93                                                            ---------------------------------------------- Pfam domains (3)
           Pfam domains (4) SM-ATX-1m5qZ04 Z:12-93                                                            ---------------------------------------------- Pfam domains (4)
           Pfam domains (5) SM-ATX-1m5qZ05 Z:12-93                                                            ---------------------------------------------- Pfam domains (5)
           Pfam domains (6) SM-ATX-1m5qZ06 Z:12-93                                                            ---------------------------------------------- Pfam domains (6)
           Pfam domains (7) SM-ATX-1m5qZ07 Z:12-93                                                            ---------------------------------------------- Pfam domains (7)
           Pfam domains (8) SM-ATX-1m5qZ08 Z:12-93                                                            ---------------------------------------------- Pfam domains (8)
           Pfam domains (9) SM-ATX-1m5qZ09 Z:12-93                                                            ---------------------------------------------- Pfam domains (9)
          Pfam domains (10) SM-ATX-1m5qZ10 Z:12-93                                                            ---------------------------------------------- Pfam domains (10)
          Pfam domains (11) SM-ATX-1m5qZ11 Z:12-93                                                            ---------------------------------------------- Pfam domains (11)
          Pfam domains (12) SM-ATX-1m5qZ12 Z:12-93                                                            ---------------------------------------------- Pfam domains (12)
          Pfam domains (13) SM-ATX-1m5qZ13 Z:12-93                                                            ---------------------------------------------- Pfam domains (13)
          Pfam domains (14) SM-ATX-1m5qZ14 Z:12-93                                                            ---------------------------------------------- Pfam domains (14)
          Pfam domains (15) SM-ATX-1m5qZ15 Z:12-93                                                            ---------------------------------------------- Pfam domains (15)
          Pfam domains (16) SM-ATX-1m5qZ16 Z:12-93                                                            ---------------------------------------------- Pfam domains (16)
          Pfam domains (17) SM-ATX-1m5qZ17 Z:12-93                                                            ---------------------------------------------- Pfam domains (17)
          Pfam domains (18) SM-ATX-1m5qZ18 Z:12-93                                                            ---------------------------------------------- Pfam domains (18)
          Pfam domains (19) SM-ATX-1m5qZ19 Z:12-93                                                            ---------------------------------------------- Pfam domains (19)
          Pfam domains (20) SM-ATX-1m5qZ20 Z:12-93                                                            ---------------------------------------------- Pfam domains (20)
          Pfam domains (21) SM-ATX-1m5qZ21 Z:12-93                                                            ---------------------------------------------- Pfam domains (21)
          Pfam domains (22) SM-ATX-1m5qZ22 Z:12-93                                                            ---------------------------------------------- Pfam domains (22)
          Pfam domains (23) SM-ATX-1m5qZ23 Z:12-93                                                            ---------------------------------------------- Pfam domains (23)
          Pfam domains (24) SM-ATX-1m5qZ24 Z:12-93                                                            ---------------------------------------------- Pfam domains (24)
          Pfam domains (25) SM-ATX-1m5qZ25 Z:12-93                                                            ---------------------------------------------- Pfam domains (25)
          Pfam domains (26) SM-ATX-1m5qZ26 Z:12-93                                                            ---------------------------------------------- Pfam domains (26)
          Pfam domains (27) SM-ATX-1m5qZ27 Z:12-93                                                            ---------------------------------------------- Pfam domains (27)
          Pfam domains (28) SM-ATX-1m5qZ28 Z:12-93                                                            ---------------------------------------------- Pfam domains (28)
         Sec.struct. author hhhhhhh....eeeeee....eeeeeeeee.....eeeeeee.....eeeeeee....eeeeee.....hhhhhhhhhhhhh...eeee....eeee...eeee..eee..hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1m5q Z  12 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKAGEKFNRVFImYRYIVHIDSTERRIDmREFAKQAEKIFPGmVKYIEETNVVLIGDKVRVSEIGVEGVGPVAERAKRLFEEFLKR 139
                                    21        31        41        51        61    |   71        81|       91    |  101       111       121       131        
                                                                                 66-MSE          82-MSE        96-MSE                                       

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 28)

Asymmetric Unit

(-) CATH Domains  (2, 56)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)
1a1m5q1021:80-137
1b1m5q2022:80-137
1c1m5qW02W:80-137
1d1m5qX02X:80-137
1e1m5qY02Y:80-137
1f1m5qZ02Z:80-137
1g1m5qA02A:80-135
1h1m5qC02C:79-137
1i1m5qD02D:80-135
1j1m5qB02B:79-135
1k1m5qE02E:79-135
1l1m5qF02F:79-135
1m1m5qH02H:80-137
1n1m5qG02G:79-135
1o1m5qO02O:79-135
1p1m5qP02P:79-135
1q1m5qQ02Q:79-135
1r1m5qR02R:79-135
1s1m5qS02S:79-135
1t1m5qT02T:79-135
1u1m5qU02U:79-135
1v1m5qI02I:80-137
1w1m5qJ02J:80-137
1x1m5qK02K:80-137
1y1m5qL02L:80-137
1z1m5qM02M:80-137
1aa1m5qN02N:80-137
1ab1m5qV02V:80-137
(-)
Class: Mainly Beta (13760)
2a1m5q1011:12-79
2b1m5qD01D:12-79
2c1m5qH01H:12-79
2d1m5qI01I:12-79
2e1m5qJ01J:12-79
2f1m5qK01K:12-79
2g1m5qL01L:12-79
2h1m5qM01M:12-79
2i1m5qN01N:12-79
2j1m5qV01V:12-79
2k1m5qW01W:12-79
2l1m5qX01X:12-79
2m1m5qY01Y:12-79
2n1m5qZ01Z:12-79
2o1m5qB01B:12-78
2p1m5qC01C:12-78
2q1m5qE01E:12-78
2r1m5qF01F:12-78
2s1m5qG01G:12-78
2t1m5qO01O:12-78
2u1m5qP01P:12-78
2v1m5qQ01Q:12-78
2w1m5qR01R:12-78
2x1m5qS01S:12-78
2y1m5qT01T:12-78
2z1m5qU01U:12-78
2aa1m5q2012:12-79
2ab1m5qA01A:12-79

(-) Pfam Domains  (1, 28)

Asymmetric Unit
(-)
Clan: Sm-like (17)

(-) Gene Ontology  (3, 3)

Asymmetric Unit(hide GO term definitions)
Chain 1,2,A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z   (Q8ZVU2_PYRAE | Q8ZVU2)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
cellular component
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0019013    viral nucleocapsid    The complete protein-nucleic acid complex that is the packaged form of the genome in a virus particle.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

(no "Entries Sharing at Least One Protein Chain" available for 1M5Q)

(-) Related Entries Specified in the PDB File

1d3b THE HUMAN SM D3-B HETERODIMER STRUCTURE
1i4k ANOTHER SM-LIKE ARCHAEAL PROTEIN (SMAP1) FROM ARCHAEOGLOBUS FULGIDUS
1i8f ANOTHER SM-LIKE ARCHAEAL PROTEIN (SMAP1) FROM PYROBACULUM AEROPHILUM
1jbm ANOTHER SM-LIKE ARCHAEAL PROTEIN (SMAP1) FROM METHANOBACTERIUM THERMAUTOTROPHICUM