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(-) Description

Title :  MECHANOSENSITIVE CHANNEL OF SMALL CONDUCTANCE (MSCS)
 
Authors :  D. C. Rees, R. B. Bass, S. Steinbacher, P. Strop, M. T. Barclay
Date :  17 Dec 06  (Deposition) - 09 Jan 07  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.70
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G
Keywords :  Stretch Activated, Mechanosensitive Ion Channel, Membrane Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. Steinbacher, R. Bass, P. Strop, D. C. Rees
Structures Of The Prokaryotic Mechanosensitive Channels Mscl And Mscs
Current Topics In Membranes V. 58 2007
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - SMALL-CONDUCTANCE MECHANOSENSITIVE CHANNEL
    Chains: A, B, C, D, E, F, G
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: PET28B
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: MSCS
    Organism Scientific: ESCHERICHIA COLI
    Organism Taxid: 562

 Structural Features

(-) Chains, Units

  1234567
Asymmetric/Biological Unit : ABCDEFG

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2OAU)

(-) Sites  (0, 0)

(no "Site" information available for 2OAU)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2OAU)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2OAU)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2OAU)

(-) PROSITE Motifs  (1, 7)

Asymmetric/Biological Unit (1, 7)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1UPF0003PS01246 Uncharacterized protein family UPF0003 signature.MSCS_ECOLI143-177
 
 
 
 
 
 		  7A:143-177
B:143-177
C:143-177
D:143-177
E:143-177
F:143-177
G:143-177

(-) Exons   (0, 0)

(no "Exon" information available for 2OAU)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:254
 aligned with MSCS_ECOLI | P0C0S1 from UniProtKB/Swiss-Prot  Length:286

    Alignment length:254
                                    36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276    
           MSCS_ECOLI    27 YAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRV 280
               SCOP domains d2oaua3 A:27-112 Mechanosensitive channel protein MscS (YggB), transmembrane region   d2oaua1 A:113-179                                                  d2oaua2 A:180-280 Mechanosensitive channel protein MscS (YggB), C-terminal domain                     SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------2oauA02 A:129-180                                   2oauA03 A:181-266  [code=3.30.70.100, no name defined]                                -------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......eee....eeeeeee...eeeeee....eeeeehhhhhhh.eee.....eeeeeeeeee....hhhhhhhhhhhhhhhh........eeeeeee.....eeeeeeeeeehhhhhhhhhhhhhhhhhhhhhhh......eeeeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------UPF0003  PDB: A:143-177            ------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2oau A  27 YAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRV 280
                                    36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276    


Chain B from PDB  Type:PROTEIN  Length:254
 aligned with MSCS_ECOLI | P0C0S1 from UniProtKB/Swiss-Prot  Length:286

    Alignment length:254
                                    36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276    
           MSCS_ECOLI    27 YAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRV 280
               SCOP domains d2oaub3 B:27-112 Mechanosensitive channel protein MscS (YggB), transmembrane region   d2oaub1 B:113-179                                                  d2oaub2 B:180-280 Mechanosensitive channel protein MscS (YggB), C-terminal domain                     SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------2oauB02 B:129-180                                   2oauB03 B:181-266  [code=3.30.70.100, no name defined]                                -------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......eee....eeeeeee...eeeeee....eeeeehhhhhhh.eee.....eeeeeeeeee....hhhhhhhhhhhhhhhh........eeeeeee.....eeeeeeeeeehhhhhhhhhhhhhhhhhhhhhhh......eeeeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------UPF0003  PDB: B:143-177            ------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2oau B  27 YAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRV 280
                                    36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276    


Chain C from PDB  Type:PROTEIN  Length:254
 aligned with MSCS_ECOLI | P0C0S1 from UniProtKB/Swiss-Prot  Length:286

    Alignment length:254
                                    36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276    
           MSCS_ECOLI    27 YAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRV 280
               SCOP domains d2oauc3 C:27-112 Mechanosensitive channel protein MscS (YggB), transmembrane region   d2oauc1 C:113-179                                                  d2oauc2 C:180-280 Mechanosensitive channel protein MscS (YggB), C-terminal domain                     SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------2oauC02 C:129-180                                   2oauC03 C:181-266  [code=3.30.70.100, no name defined]                                -------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......eee....eeeeeee...eeeeee....eeeeehhhhhhh.eee.....eeeeeeeeee....hhhhhhhhhhhhhhhh........eeeeeee.....eeeeeeeeeehhhhhhhhhhhhhhhhhhhhhhh......eeeeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------UPF0003  PDB: C:143-177            ------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2oau C  27 YAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRV 280
                                    36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276    


Chain D from PDB  Type:PROTEIN  Length:254
 aligned with MSCS_ECOLI | P0C0S1 from UniProtKB/Swiss-Prot  Length:286

    Alignment length:254
                                    36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276    
           MSCS_ECOLI    27 YAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRV 280
               SCOP domains d2oaud3 D:27-112 Mechanosensitive channel protein MscS (YggB), transmembrane region   d2oaud1 D:113-179                                                  d2oaud2 D:180-280 Mechanosensitive channel protein MscS (YggB), C-terminal domain                     SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------2oauD02 D:129-180                                   2oauD03 D:181-266  [code=3.30.70.100, no name defined]                                -------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......eee....eeeeeee...eeeeee....eeeeehhhhhhh.eee.....eeeeeeeeee....hhhhhhhhhhhhhhhh........eeeeeee.....eeeeeeeeeehhhhhhhhhhhhhhhhhhhhhhh......eeeeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------UPF0003  PDB: D:143-177            ------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2oau D  27 YAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRV 280
                                    36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276    


Chain E from PDB  Type:PROTEIN  Length:254
 aligned with MSCS_ECOLI | P0C0S1 from UniProtKB/Swiss-Prot  Length:286

    Alignment length:254
                                    36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276    
           MSCS_ECOLI    27 YAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRV 280
               SCOP domains d2oaue3 E:27-112 Mechanosensitive channel protein MscS (YggB), transmembrane region   d2oaue1 E:113-179                                                  d2oaue2 E:180-280 Mechanosensitive channel protein MscS (YggB), C-terminal domain                     SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------2oauE02 E:129-180                                   2oauE03 E:181-266  [code=3.30.70.100, no name defined]                                -------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......eee....eeeeeee...eeeeee....eeeeehhhhhhh.eee.....eeeeeeeeee....hhhhhhhhhhhhhhhh........eeeeeee.....eeeeeeeeeehhhhhhhhhhhhhhhhhhhhhhh......eeeeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------UPF0003  PDB: E:143-177            ------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2oau E  27 YAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRV 280
                                    36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276    


Chain F from PDB  Type:PROTEIN  Length:254
 aligned with MSCS_ECOLI | P0C0S1 from UniProtKB/Swiss-Prot  Length:286

    Alignment length:254
                                    36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276    
           MSCS_ECOLI    27 YAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRV 280
               SCOP domains d2oauf3 F:27-112 Mechanosensitive channel protein MscS (YggB), transmembrane region   d2oauf1 F:113-179                                                  d2oauf2 F:180-280 Mechanosensitive channel protein MscS (YggB), C-terminal domain                     SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------2oauF02 F:129-180                                   2oauF03 F:181-266  [code=3.30.70.100, no name defined]                                -------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......eee....eeeeeee...eeeeee....eeeeehhhhhhh.eee.....eeeeeeeeee....hhhhhhhhhhhhhhhh........eeeeeee.....eeeeeeeeeehhhhhhhhhhhhhhhhhhhhhhh......eeeeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------UPF0003  PDB: F:143-177            ------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2oau F  27 YAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRV 280
                                    36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276    


Chain G from PDB  Type:PROTEIN  Length:254
 aligned with MSCS_ECOLI | P0C0S1 from UniProtKB/Swiss-Prot  Length:286

    Alignment length:254
                                    36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276    
           MSCS_ECOLI    27 YAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRV 280
               SCOP domains d2oaug3 G:27-112 Mechanosensitive channel protein MscS (YggB), transmembrane region   d2oaug1 G:113-179                                                  d2oaug2 G:180-280 Mechanosensitive channel protein MscS (YggB), C-terminal domain                     SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------2oauG02 G:129-180                                   2oauG03 G:181-266  [code=3.30.70.100, no name defined]                                -------------- CATH domains
           Pfam domains (1) TM_helix-2oauG08 G:27-66                ---MS_channel-2oauG01 G:70-268                                                                                                                                                                            ------------ Pfam domains (1)
           Pfam domains (2) TM_helix-2oauG09 G:27-66                ---MS_channel-2oauG02 G:70-268                                                                                                                                                                            ------------ Pfam domains (2)
           Pfam domains (3) TM_helix-2oauG10 G:27-66                ---MS_channel-2oauG03 G:70-268                                                                                                                                                                            ------------ Pfam domains (3)
           Pfam domains (4) TM_helix-2oauG11 G:27-66                ---MS_channel-2oauG04 G:70-268                                                                                                                                                                            ------------ Pfam domains (4)
           Pfam domains (5) TM_helix-2oauG12 G:27-66                ---MS_channel-2oauG05 G:70-268                                                                                                                                                                            ------------ Pfam domains (5)
           Pfam domains (6) TM_helix-2oauG13 G:27-66                ---MS_channel-2oauG06 G:70-268                                                                                                                                                                            ------------ Pfam domains (6)
           Pfam domains (7) TM_helix-2oauG14 G:27-66                ---MS_channel-2oauG07 G:70-268                                                                                                                                                                            ------------ Pfam domains (7)
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......eee....eeeeeee...eeeeee....eeeeehhhhhhh.eee.....eeeeeeeeee....hhhhhhhhhhhhhhhh........eeeeeee.....eeeeeeeeeehhhhhhhhhhhhhhhhhhhhhhh......eeeeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------UPF0003  PDB: G:143-177            ------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2oau G  27 YAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRV 280
                                    36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (3, 21)

Asymmetric/Biological Unit
(-)
Class: All beta proteins (24004)
(-)
Class: Alpha and beta proteins (a+b) (23004)
(-)
Class: Membrane and cell surface proteins and peptides (2046)

(-) CATH Domains  (2, 14)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (2, 14)

Asymmetric/Biological Unit
(-)
Clan: no clan defined [family: MS_channel] (2)
(-)
Clan: no clan defined [family: TM_helix] (2)

(-) Gene Ontology  (9, 9)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G   (MSCS_ECOLI | P0C0S1)
molecular function
    GO:0008381    mechanically-gated ion channel activity    Enables the transmembrane transfer of an ion by a channel that opens in response to a mechanical stress.
biological process
    GO:0009992    cellular water homeostasis    Any process involved in the maintenance of an internal steady state of water within a cell.
    GO:0034220    ion transmembrane transport    A process in which an ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.
    GO:0006811    ion transport    The directed movement of charged atoms or small charged molecules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
    GO:0055085    transmembrane transport    The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other
    GO:0006810    transport    The directed movement of substances (such as macromolecules, small molecules, ions) or cellular components (such as complexes and organelles) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter, pore or motor protein.
cellular component
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

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 Databases and Analysis Tools

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  2oau
    Family and Domain Information: ProDom | SYSTERS
    General Structural Information: GlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in Membranes: OPM
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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        MSCS_ECOLI | P0C0S1: 2vv5 3udc 4age 4agf 4hwa 5aji

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 2OAU)