Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asym./Biol. Unit - manually
(-)Asym./Biol. Unit
collapse expand < >
Image Asym./Biol. Unit - manually
Asym./Biol. Unit - manually  (Jmol Viewer)
Image Asym./Biol. Unit
Asym./Biol. Unit  (Jmol Viewer)

(-) Description

Title :  CRYSTAL STRUCTURE OF AN ARCHAEAL SM PROTEIN FROM SULFOLOBUS SOLFATARICUS
 
Authors :  T. Kilic, D. Suck
Date :  01 Jun 04  (Deposition) - 07 Jun 05  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.68
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N
Keywords :  Archaea; Sm Protein; Sm Fold; Ss-Sm1, Rna Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  T. Kilic, S. Thore, D. Suck
Crystal Structure Of An Archaeal Sm Protein From Sulfolobus Solfataricus
Proteins V. 61 689 2005
PubMed-ID: 16184597  |  Reference-DOI: 10.1002/PROT.20637
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - SMALL NUCLEAR RIBOPROTEIN PROTEIN
    Chains: A, B, C, D, E, F, G, H, I, J, K, L, M, N
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: PET24
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: SNRNP-2
    Organism Scientific: SULFOLOBUS SOLFATARICUS
    Organism Taxid: 2287
    Synonym: SNRNP-2

 Structural Features

(-) Chains, Units

  1234567891011121314
Asymmetric/Biological Unit : ABCDEFGHIJKLMN

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 1TH7)

(-) Sites  (0, 0)

(no "Site" information available for 1TH7)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1TH7)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1TH7)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1TH7)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1TH7)

(-) Exons   (0, 0)

(no "Exon" information available for 1TH7)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:78
 aligned with Q97ZQ0_SULSO | Q97ZQ0 from UniProtKB/TrEMBL  Length:79

    Alignment length:78
                              1                                                                           
                              |      8        18        28        38        48        58        68        
          Q97ZQ0_SULSO    - --MNFLAETAHKVLAESLNNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEEIQSDGSGKKLGTIVIRGDNVILISPL 76
               SCOP domains --d1th7a1 A:3-78 Archaeal homoheptameric Sm protein                            SCOP domains
               CATH domains 1th7A00 A:1-78  [code=2.30.30.100, no name defined]                            CATH domains
               Pfam domains ------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......hhhhhhhhhhhh..eeeeee...eeeeeeeeee.....eeeeeeeee.....eeeeeeeee....eeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------ Transcript
                  1th7 A  1 GAMNFLAETAHKVLAESLNNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEEIQSDGSGKKLGTIVIRGDNVILISPL 78
                                    10        20        30        40        50        60        70        


Chain B from PDB  Type:PROTEIN  Length:78
 aligned with Q97ZQ0_SULSO | Q97ZQ0 from UniProtKB/TrEMBL  Length:79

    Alignment length:78
                              1                                                                           
                              |      8        18        28        38        48        58        68        
          Q97ZQ0_SULSO    - --MNFLAETAHKVLAESLNNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEEIQSDGSGKKLGTIVIRGDNVILISPL 76
               SCOP domains d1th7b_ B: Archaeal homoheptameric Sm protein                                  SCOP domains
               CATH domains 1th7B00 B:1-78  [code=2.30.30.100, no name defined]                            CATH domains
               Pfam domains ------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......hhhhhhhhhhhh..eeeeee.....eeeeeeee.....eeeeeeeee.....eeeeeeeee....eeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------ Transcript
                  1th7 B  1 GAMNFLAETAHKVLAESLNNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEEIQSDGSGKKLGTIVIRGDNVILISPL 78
                                    10        20        30        40        50        60        70        


Chain C from PDB  Type:PROTEIN  Length:78
 aligned with Q97ZQ0_SULSO | Q97ZQ0 from UniProtKB/TrEMBL  Length:79

    Alignment length:78
                              1                                                                           
                              |      8        18        28        38        48        58        68        
          Q97ZQ0_SULSO    - --MNFLAETAHKVLAESLNNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEEIQSDGSGKKLGTIVIRGDNVILISPL 76
               SCOP domains d1th7c_ C: Archaeal homoheptameric Sm protein                                  SCOP domains
               CATH domains 1th7C00 C:1-78  [code=2.30.30.100, no name defined]                            CATH domains
               Pfam domains ------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......hhhhhhhhhhhh..eeeeee..eeeeeeeeeee.....eeeeeeeee.....eeeeeeeee....eeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------ Transcript
                  1th7 C  1 GAMNFLAETAHKVLAESLNNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEEIQSDGSGKKLGTIVIRGDNVILISPL 78
                                    10        20        30        40        50        60        70        


Chain D from PDB  Type:PROTEIN  Length:78
 aligned with Q97ZQ0_SULSO | Q97ZQ0 from UniProtKB/TrEMBL  Length:79

    Alignment length:78
                              1                                                                           
                              |      8        18        28        38        48        58        68        
          Q97ZQ0_SULSO    - --MNFLAETAHKVLAESLNNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEEIQSDGSGKKLGTIVIRGDNVILISPL 76
               SCOP domains d1th7d_ D: Archaeal homoheptameric Sm protein                                  SCOP domains
               CATH domains 1th7D00 D:1-78  [code=2.30.30.100, no name defined]                            CATH domains
               Pfam domains ------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......hhhhhhhhhhhh..eeeeee...eeeeeeeeee.....eeeeeeeee.....eeeeeeeee....eeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------ Transcript
                  1th7 D  1 GAMNFLAETAHKVLAESLNNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEEIQSDGSGKKLGTIVIRGDNVILISPL 78
                                    10        20        30        40        50        60        70        


Chain E from PDB  Type:PROTEIN  Length:78
 aligned with Q97ZQ0_SULSO | Q97ZQ0 from UniProtKB/TrEMBL  Length:79

    Alignment length:78
                              1                                                                           
                              |      8        18        28        38        48        58        68        
          Q97ZQ0_SULSO    - --MNFLAETAHKVLAESLNNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEEIQSDGSGKKLGTIVIRGDNVILISPL 76
               SCOP domains d1th7e_ E: Archaeal homoheptameric Sm protein                                  SCOP domains
               CATH domains 1th7E00 E:1-78  [code=2.30.30.100, no name defined]                            CATH domains
               Pfam domains ------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......hhhhhhhhhhhh..eeeeee..eeeeeeeeeee.....eeeeeeeee.....eeeeeeeee....eeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------ Transcript
                  1th7 E  1 GAMNFLAETAHKVLAESLNNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEEIQSDGSGKKLGTIVIRGDNVILISPL 78
                                    10        20        30        40        50        60        70        


Chain F from PDB  Type:PROTEIN  Length:78
 aligned with Q97ZQ0_SULSO | Q97ZQ0 from UniProtKB/TrEMBL  Length:79

    Alignment length:78
                              1                                                                           
                              |      8        18        28        38        48        58        68        
          Q97ZQ0_SULSO    - --MNFLAETAHKVLAESLNNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEEIQSDGSGKKLGTIVIRGDNVILISPL 76
               SCOP domains d1th7f_ F: Archaeal homoheptameric Sm protein                                  SCOP domains
               CATH domains 1th7F00 F:1-78  [code=2.30.30.100, no name defined]                            CATH domains
               Pfam domains ------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......hhhhhhhhhhhh..eeeeee...eeeeeeeeee.....eeeeeeeee.....eeeeeeeee....eeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------ Transcript
                  1th7 F  1 GAMNFLAETAHKVLAESLNNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEEIQSDGSGKKLGTIVIRGDNVILISPL 78
                                    10        20        30        40        50        60        70        


Chain G from PDB  Type:PROTEIN  Length:78
 aligned with Q97ZQ0_SULSO | Q97ZQ0 from UniProtKB/TrEMBL  Length:79

    Alignment length:78
                              1                                                                           
                              |      8        18        28        38        48        58        68        
          Q97ZQ0_SULSO    - --MNFLAETAHKVLAESLNNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEEIQSDGSGKKLGTIVIRGDNVILISPL 76
               SCOP domains d1th7g_ G: Archaeal homoheptameric Sm protein                                  SCOP domains
               CATH domains 1th7G00 G:1-78  [code=2.30.30.100, no name defined]                            CATH domains
               Pfam domains ------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......hhhhhhhhhhhh..eeeeee...eeeeeeeeee.....eeeeeeeee.....eeeeeeeee....eeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------ Transcript
                  1th7 G  1 GAMNFLAETAHKVLAESLNNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEEIQSDGSGKKLGTIVIRGDNVILISPL 78
                                    10        20        30        40        50        60        70        


Chain H from PDB  Type:PROTEIN  Length:78
 aligned with Q97ZQ0_SULSO | Q97ZQ0 from UniProtKB/TrEMBL  Length:79

    Alignment length:78
                              1                                                                           
                              |      8        18        28        38        48        58        68        
          Q97ZQ0_SULSO    - --MNFLAETAHKVLAESLNNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEEIQSDGSGKKLGTIVIRGDNVILISPL 76
               SCOP domains d1th7h_ H: Archaeal homoheptameric Sm protein                                  SCOP domains
               CATH domains 1th7H00 H:1-78  [code=2.30.30.100, no name defined]                            CATH domains
               Pfam domains ------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......hhhhhhhhhhhh..eeeeee.....eeeeeeee.....eeeeeeeee.....eeeeeeeee....eeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------ Transcript
                  1th7 H  1 GAMNFLAETAHKVLAESLNNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEEIQSDGSGKKLGTIVIRGDNVILISPL 78
                                    10        20        30        40        50        60        70        


Chain I from PDB  Type:PROTEIN  Length:78
 aligned with Q97ZQ0_SULSO | Q97ZQ0 from UniProtKB/TrEMBL  Length:79

    Alignment length:78
                              1                                                                           
                              |      8        18        28        38        48        58        68        
          Q97ZQ0_SULSO    - --MNFLAETAHKVLAESLNNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEEIQSDGSGKKLGTIVIRGDNVILISPL 76
               SCOP domains d1th7i_ I: Archaeal homoheptameric Sm protein                                  SCOP domains
               CATH domains 1th7I00 I:1-78  [code=2.30.30.100, no name defined]                            CATH domains
               Pfam domains ------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......hhhhhhhhhhhh..eeeeee...eeeeeeeeee.....eeeeeeeee.....eeeeeeeee....eeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------ Transcript
                  1th7 I  1 GAMNFLAETAHKVLAESLNNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEEIQSDGSGKKLGTIVIRGDNVILISPL 78
                                    10        20        30        40        50        60        70        


Chain J from PDB  Type:PROTEIN  Length:78
 aligned with Q97ZQ0_SULSO | Q97ZQ0 from UniProtKB/TrEMBL  Length:79

    Alignment length:78
                              1                                                                           
                              |      8        18        28        38        48        58        68        
          Q97ZQ0_SULSO    - --MNFLAETAHKVLAESLNNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEEIQSDGSGKKLGTIVIRGDNVILISPL 76
               SCOP domains d1th7j_ J: Archaeal homoheptameric Sm protein                                  SCOP domains
               CATH domains 1th7J00 J:1-78  [code=2.30.30.100, no name defined]                            CATH domains
               Pfam domains ------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......hhhhhhhhhhhh..eeeeee..eeeeeeeeeee.....eeeeeeeee.....eeeeeeeee....eeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------ Transcript
                  1th7 J  1 GAMNFLAETAHKVLAESLNNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEEIQSDGSGKKLGTIVIRGDNVILISPL 78
                                    10        20        30        40        50        60        70        


Chain K from PDB  Type:PROTEIN  Length:78
 aligned with Q97ZQ0_SULSO | Q97ZQ0 from UniProtKB/TrEMBL  Length:79

    Alignment length:78
                              1                                                                           
                              |      8        18        28        38        48        58        68        
          Q97ZQ0_SULSO    - --MNFLAETAHKVLAESLNNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEEIQSDGSGKKLGTIVIRGDNVILISPL 76
               SCOP domains d1th7k_ K: Archaeal homoheptameric Sm protein                                  SCOP domains
               CATH domains 1th7K00 K:1-78  [code=2.30.30.100, no name defined]                            CATH domains
               Pfam domains ------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......hhhhhhhhhhhh..eeeeee...eeeeeeeeee.....eeeeeeee........eeeeeee....eeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------ Transcript
                  1th7 K  1 GAMNFLAETAHKVLAESLNNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEEIQSDGSGKKLGTIVIRGDNVILISPL 78
                                    10        20        30        40        50        60        70        


Chain L from PDB  Type:PROTEIN  Length:78
 aligned with Q97ZQ0_SULSO | Q97ZQ0 from UniProtKB/TrEMBL  Length:79

    Alignment length:78
                              1                                                                           
                              |      8        18        28        38        48        58        68        
          Q97ZQ0_SULSO    - --MNFLAETAHKVLAESLNNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEEIQSDGSGKKLGTIVIRGDNVILISPL 76
               SCOP domains d1th7l_ L: Archaeal homoheptameric Sm protein                                  SCOP domains
               CATH domains 1th7L00 L:1-78  [code=2.30.30.100, no name defined]                            CATH domains
               Pfam domains ------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......hhhhhhhhhhhh..eeeeee.....eeeeeeee.....eeeeeeeee.....eeeeeeeee....eeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------ Transcript
                  1th7 L  1 GAMNFLAETAHKVLAESLNNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEEIQSDGSGKKLGTIVIRGDNVILISPL 78
                                    10        20        30        40        50        60        70        


Chain M from PDB  Type:PROTEIN  Length:78
 aligned with Q97ZQ0_SULSO | Q97ZQ0 from UniProtKB/TrEMBL  Length:79

    Alignment length:78
                              1                                                                           
                              |      8        18        28        38        48        58        68        
          Q97ZQ0_SULSO    - --MNFLAETAHKVLAESLNNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEEIQSDGSGKKLGTIVIRGDNVILISPL 76
               SCOP domains d1th7m_ M: Archaeal homoheptameric Sm protein                                  SCOP domains
               CATH domains 1th7M00 M:1-78  [code=2.30.30.100, no name defined]                            CATH domains
               Pfam domains ------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......hhhhhhhhhhhh..eeeeee...eeeeeeeeee.....eeeeeeeee.....eeeeeeeee....eeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------ Transcript
                  1th7 M  1 GAMNFLAETAHKVLAESLNNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEEIQSDGSGKKLGTIVIRGDNVILISPL 78
                                    10        20        30        40        50        60        70        


Chain N from PDB  Type:PROTEIN  Length:78
 aligned with Q97ZQ0_SULSO | Q97ZQ0 from UniProtKB/TrEMBL  Length:79

    Alignment length:78
                              1                                                                           
                              |      8        18        28        38        48        58        68        
          Q97ZQ0_SULSO    - --MNFLAETAHKVLAESLNNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEEIQSDGSGKKLGTIVIRGDNVILISPL 76
               SCOP domains d1th7n_ N: Archaeal homoheptameric Sm protein                                  SCOP domains
               CATH domains 1th7N00 N:1-78  [code=2.30.30.100, no name defined]                            CATH domains
           Pfam domains (1) -----------LSM-1th7N01 N:12-77                                               - Pfam domains (1)
           Pfam domains (2) -----------LSM-1th7N02 N:12-77                                               - Pfam domains (2)
           Pfam domains (3) -----------LSM-1th7N03 N:12-77                                               - Pfam domains (3)
           Pfam domains (4) -----------LSM-1th7N04 N:12-77                                               - Pfam domains (4)
           Pfam domains (5) -----------LSM-1th7N05 N:12-77                                               - Pfam domains (5)
           Pfam domains (6) -----------LSM-1th7N06 N:12-77                                               - Pfam domains (6)
           Pfam domains (7) -----------LSM-1th7N07 N:12-77                                               - Pfam domains (7)
           Pfam domains (8) -----------LSM-1th7N08 N:12-77                                               - Pfam domains (8)
           Pfam domains (9) -----------LSM-1th7N09 N:12-77                                               - Pfam domains (9)
          Pfam domains (10) -----------LSM-1th7N10 N:12-77                                               - Pfam domains (10)
          Pfam domains (11) -----------LSM-1th7N11 N:12-77                                               - Pfam domains (11)
          Pfam domains (12) -----------LSM-1th7N12 N:12-77                                               - Pfam domains (12)
          Pfam domains (13) -----------LSM-1th7N13 N:12-77                                               - Pfam domains (13)
          Pfam domains (14) -----------LSM-1th7N14 N:12-77                                               - Pfam domains (14)
         Sec.struct. author ......hhhhhhhhhhhh..eeeeee...eeeeeeeeee.....eeeeeeeee.....eeeeeeeee....eeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------ Transcript
                  1th7 N  1 GAMNFLAETAHKVLAESLNNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEEIQSDGSGKKLGTIVIRGDNVILISPL 78
                                    10        20        30        40        50        60        70
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 14)

Asymmetric/Biological Unit
(-)
Class: All beta proteins (24004)

(-) CATH Domains  (1, 14)

Asymmetric/Biological Unit
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (1, 14)

Asymmetric/Biological Unit
(-)
Clan: Sm-like (17)

(-) Gene Ontology  (3, 3)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H,I,J,K,L,M,N   (Q97ZQ0_SULSO | Q97ZQ0)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
biological process
    GO:0006396    RNA processing    Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules.
cellular component
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.

 Visualization

(-) Interactive Views

Asymmetric/Biological Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
(no "Ligands, Modified Residues, Ions" information available for 1th7)
 
  Sites
(no "Sites" information available for 1th7)
 
  Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 1th7)
 

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
[ Asym./Biol. Unit PNG format ](automatic orientation, automatically generated)
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick
[ mono PDF format | stereo PDF format ](default orientation, automatically generated)

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  1th7
    Family and Domain Information: ProDom | SYSTERS
    General Structural Information: GlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in Membranes: OPM
    Protein Surface: SURFACE
    Secondary Structure: DSSP (structure derived) | HSSP (homology derived)
    Structural Genomics: GeneCensus
    Structural Neighbours: CE | VAST
    Structure Classification: CATH | Dali | SCOP
    Validation and Original Data: BMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  Q97ZQ0_SULSO | Q97ZQ0
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/TrEMBL
 
Access by Enzyme Classificator   (EC Number)
  (no 'Enzyme Classificator' available)
    General Enzyme Information: BRENDA | EC-PDB | Enzyme | IntEnz
    Pathway: KEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease Information: OMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related Information: GenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain Information: XDom
    Interatomic Contacts of Structural Units: CSU
    Ligand-protein Contacts: LPC
    Protein Cavities: castP
    Sequence and Secondary Structure: PDBCartoon
    Structure Alignment: STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence Browser: STING
 
Access by UniProt ID/Accession number
  Q97ZQ0_SULSO | Q97ZQ0
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

(no "Entries Sharing at Least One Protein Chain" available for 1TH7)

(-) Related Entries Specified in the PDB File

1h64 SM-LIKE PROTEIN FROM P.ABYSSI
1i4k SM-LIKE PROTEIN FROM A.FULGIDUS