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(-) Description

Title :  COMPLEX OF ADP-ACTIN WITH THE N-TERMINAL ACTIN-BINDING DOMAIN OF TROPOMODULIN
 
Authors :  J. N. Rao, R. Dominguez
Date :  14 May 14  (Deposition) - 30 Jul 14  (Release) - 06 Aug 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.15
Chains :  Asym. Unit :  A,B,D,E,F,G,I,J
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  D,E  (1x)
Biol. Unit 3:  F,G  (1x)
Biol. Unit 4:  I,J  (1x)
Keywords :  Tmod, Actin Filament, Pointed-End Capping Protein, Tropomyosin, Contractile Protein, Actin-Binding Protein, Contractile Protein- Actin-Binding Protein Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. N. Rao, Y. Madasu, R. Dominguez
Actin Cytoskeleton. Mechanism Of Actin Filament Pointed-End Capping By Tropomodulin.
Science V. 345 463 2014
PubMed-ID: 25061212  |  Reference-DOI: 10.1126/SCIENCE.1256159

(-) Compounds

Molecule 1 - ACTIN, ALPHA SKELETAL MUSCLE
    Chains: A, D, F, I
    Organism Common: RABBIT
    Organism Scientific: ORYCTOLAGUS CUNICULUS
    Organism Taxid: 9986
    Synonym: ALPHA-ACTIN-1
    Tissue: SKELETAL MUSCLE
 
Molecule 2 - GELSOLIN,TROPOMODULIN-1 CHIMERA
    Chains: B, E, G, J
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PTYB11
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: GELSOLIN (UNP RESIDUES 12-136), GGSGGSGGS LINKER, TMOD1 ACTIN-BINDING SITE 1 (UNP RESIDUES 50-101)
    Gene: GSN, TMOD1, D9S57E, TMOD
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: AGEL,ACTIN-DEPOLYMERIZING FACTOR,ADF,BREVIN,ERYTHROCYTE TROPOMODULIN,E-TMOD

 Structural Features

(-) Chains, Units

  12345678
Asymmetric Unit : ABDEFGIJ
Biological Unit 1 (1x): AB      
Biological Unit 2 (1x):   DE    
Biological Unit 3 (1x):     FG  
Biological Unit 4 (1x):       IJ

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 16)

Asymmetric Unit (2, 16)
No.NameCountTypeFull Name
1ADP4Ligand/IonADENOSINE-5'-DIPHOSPHATE
2CA12Ligand/IonCALCIUM ION
Biological Unit 1 (1, 1)
No.NameCountTypeFull Name
1ADP1Ligand/IonADENOSINE-5'-DIPHOSPHATE
2CA-1Ligand/IonCALCIUM ION
Biological Unit 2 (1, 1)
No.NameCountTypeFull Name
1ADP1Ligand/IonADENOSINE-5'-DIPHOSPHATE
2CA-1Ligand/IonCALCIUM ION
Biological Unit 3 (1, 1)
No.NameCountTypeFull Name
1ADP1Ligand/IonADENOSINE-5'-DIPHOSPHATE
2CA-1Ligand/IonCALCIUM ION
Biological Unit 4 (1, 1)
No.NameCountTypeFull Name
1ADP1Ligand/IonADENOSINE-5'-DIPHOSPHATE
2CA-1Ligand/IonCALCIUM ION

(-) Sites  (16, 16)

Asymmetric Unit (16, 16)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLY A:13 , SER A:14 , GLY A:15 , LEU A:16 , LYS A:18 , GLY A:156 , ASP A:157 , GLY A:182 , LYS A:213 , GLU A:214 , GLY A:301 , GLY A:302 , THR A:303 , MET A:305 , LYS A:336 , CA A:402 , HOH A:511 , HOH A:516binding site for residue ADP A 401
02AC2SOFTWAREADP A:401 , HOH A:514 , HOH A:516 , HOH A:588binding site for residue CA A 402
03AC3SOFTWAREGLU A:167 , ASP B:136 , GLY B:141 , ALA B:143 , HOH B:1331binding site for residue CA A 403
04AC4SOFTWAREGLY B:92 , ASP B:93 , GLU B:124 , VAL B:172 , HOH B:1315 , HOH B:1345binding site for residue CA B 1201
05AC5SOFTWAREGLY D:13 , SER D:14 , GLY D:15 , LEU D:16 , LYS D:18 , GLY D:156 , ASP D:157 , GLY D:182 , ARG D:210 , LYS D:213 , GLU D:214 , GLY D:301 , GLY D:302 , THR D:303 , MET D:305 , TYR D:306 , LYS D:336 , CA D:402 , HOH D:510 , HOH D:524binding site for residue ADP D 401
06AC6SOFTWAREADP D:401 , HOH D:510 , HOH D:511 , HOH D:541binding site for residue CA D 402
07AC7SOFTWAREGLU D:167 , HOH D:573 , ASP E:136 , GLY E:141 , ALA E:143 , HOH E:1317binding site for residue CA D 403
08AC8SOFTWAREGLY E:92 , ASP E:93 , GLU E:124 , VAL E:172 , HOH E:1316 , HOH E:1319binding site for residue CA E 1201
09AC9SOFTWAREGLY F:13 , SER F:14 , GLY F:15 , LEU F:16 , LYS F:18 , GLY F:156 , ASP F:157 , GLY F:182 , LYS F:213 , GLU F:214 , GLY F:301 , GLY F:302 , THR F:303 , TYR F:306 , CA F:402 , HOH F:513 , HOH F:531binding site for residue ADP F 401
10AD1SOFTWAREASP F:11 , VAL F:339 , ADP F:401binding site for residue CA F 402
11AD2SOFTWAREGLU F:167 , ASP G:136 , GLY G:141 , ALA G:143binding site for residue CA F 403
12AD3SOFTWAREGLY G:92 , ASP G:93 , GLU G:124 , VAL G:172 , HOH G:1331 , HOH G:1338binding site for residue CA G 1201
13AD4SOFTWAREGLY I:13 , SER I:14 , GLY I:15 , LEU I:16 , LYS I:18 , GLY I:156 , ASP I:157 , GLY I:182 , LYS I:213 , GLU I:214 , GLY I:301 , GLY I:302 , THR I:303 , TYR I:306 , CA I:402 , HOH I:513 , HOH I:514binding site for residue ADP I 401
14AD5SOFTWAREGLN I:137 , ADP I:401 , HOH I:510 , HOH I:513binding site for residue CA I 402
15AD6SOFTWAREGLU I:167 , ASP J:136 , GLY J:141 , ALA J:143binding site for residue CA I 403
16AD7SOFTWAREGLY J:92 , ASP J:93 , GLU J:124 , VAL J:172 , HOH J:1337 , HOH J:1339binding site for residue CA J 1201

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4PKH)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4PKH)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4PKH)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4PKH)

(-) Exons   (0, 0)

(no "Exon" information available for 4PKH)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:359
                                                                                                                                                                                                                                                                                                                                                                                                        
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeee...eeeeee.......eeee..eee...eehhhhhhhhhhheee..ee..ee.hhhhhhhhhhhhhhh....hhhhh.eeeee....hhhhhhhhhhhhhhh....eeeeeehhhhhhhhh....eeeeee....eeeeeee..ee.hhhheee..hhhhhhhhhhhhhhhh........hhhhhhhhhhhhh....hhhhhhhhhhhhh...eeee.....eeee.hhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhh.eeeehhhhh..hhhhhhhhhhhhhh.......ee......hhhhhhhhhhhhhhhhh...eehhhhhhhh.hhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4pkh A    5 TTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF  375
                                    14        24        34   ||   56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366         
                                                            38|                                                                                                                                                                                                                                                                                                                                    
                                                             51                                                                                                                                                                                                                                                                                                                                    


Chain B from PDB  Type:PROTEIN  Length:165
                                                                                                                                                                                                      
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhh....eeeeeeee..eeee.hhhhh.......eeeeeeeee.....eeeeeeeee....hhhhhhhhhhhhhhhhhhh....eeeeee....hhhhhh......................hhhhhhhhhh........................... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4pkh B   54 VEHPEFLKAGKEPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASGFGTGPFKREELLDHLEKQAKEFKDREDLVPYTGEKRGKVWVPK 1099
                                    63        73        83        93       103       113       123       133       143       153       163       173   || 1064      1074      1084      1094     
                                                                                                                                                     177|                                        
                                                                                                                                                     1059                                        


Chain D from PDB  Type:PROTEIN  Length:360
                                                                                                                                                                                                                                                                                                                                                                                                         
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeeee...eeeeee.......eeee..eee....eehhhhhh.....eee..ee..ee.hhhhhhhhhhhhhhhh...hhhhh.eeeee....hhhhhhhhhhhhhh.....eeeeeehhhhhhhhh....eeeeee....eeeeeee..ee.hhhheee..hhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhheeee.....eeee.hhhhhhhhhhhhhhhhh....hhhhhhhhhhhh.hhhhhhhhhh.eeeehhhhh..hhhhhhhhhhhhhh.......ee...hhhhhhhhhhhhhhhhhhhh...eehhhhhhhh..hhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                4pkh D    5 TTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF  375
                                    14        24        34    ||  55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375
                                                             39|                                                                                                                                                                                                                                                                                                                                    
                                                              51                                                                                                                                                                                                                                                                                                                                    


Chain E from PDB  Type:PROTEIN  Length:125
                                                                                                                                                              
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhh.....eeeeeeee..eeee.hhhhh.eee...eeeeeeeee.....eeeeeeeee....hhhhhhhhhhhhhhhhhhh....eeeeee....hhhhhhh.....eee......... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------- Transcript
                4pkh E   53 VVEHPEFLKAGKEPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASGFG  177
                                    62        72        82        92       102       112       122       132       142       152       162       172     


Chain F from PDB  Type:PROTEIN  Length:365
                                                                                                                                                                                                                                                                                                                                                                                                              
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeee...eeeeee.......eeee..eeee........eehhhhhhh...eeee..ee..ee.hhhhhhhhhhhhhhh..........eeeee....hhhhhhhhhhhhhhh....eeeeeehhhhhhhhh....eeeeee....eeeeeee..ee.hhhheee..hhhhhhhhhhhhhhhh........hhhhhhhhhhhh.....hhhhhhhhhhh.....eeee.....eeee......hhhhhhhhhhh.....hhhhhhhhhhhh.hhhhhhhhhhheeeehhhhh..hhhhhhhhhhhhhh.......ee......hhhhhhhhhhh....hhhhheehhhhhhhh..hhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4pkh F    5 TTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF  375
                                    14        24        34        44||      60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370     
                                                                   45|                                                                                                                                                                                                                                                                                                                                   
                                                                    52                                                                                                                                                                                                                                                                                                                                   


Chain G from PDB  Type:PROTEIN  Length:143
                                                                                                                                                                                
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhh.....eeeeeeee..eeee.hhhhh.eee...eeeeeeeee.....eeeeeeeee....hhhhhhhhhhhhhhhhhhh....eeeeee....hhhhhh......eee...............hhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4pkh G   52 MVVEHPEFLKAGKEPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASGFGPTGPFKREELLDHLEKQ 1074
                                    61        71        81        91       101       111       121       131       141       151       161       171     |1061      1071   
                                                                                                                                                       177|                
                                                                                                                                                       1058                


Chain I from PDB  Type:PROTEIN  Length:360
                                                                                                                                                                                                                                                                                                                                                                                                         
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeeee...eeeeee.......eeee..eee....ee.hhhh......eee..ee..ee.hhhhhhhhhhhhhhh....hhhhh.eeeee....hhhhhhhhhhhhhhh....eeeeeehhhhhhhhh....eeeeee....eeeeeee..ee.hhhheee..hhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhh....hhhhhhhhhh......eee.......eee.hhhhhhhhhhhhhhhh.....hhhhhhhhhhhh.hhhhhhhhhhheeeehhhhh..hhhhhhhhhhhhhh.......ee......hhhhhhhhhhhhh.hhhhh.eehhhhhhhh.hhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                4pkh I    5 TTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF  375
                                    14        24        34    ||  55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375
                                                             39|                                                                                                                                                                                                                                                                                                                                    
                                                              51                                                                                                                                                                                                                                                                                                                                    


Chain J from PDB  Type:PROTEIN  Length:126
                                                                                                                                                               
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....hhhhhh.....eeeeeee....eee.hhhhh.eee...eeeeeeeee.....eeeeeeeee....hhhhhhhhhhhhhhhhhhh...eeeeeee....hhhhhh......eee......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------ Transcript
                4pkh J   52 MVVEHPEFLKAGKEPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASGFG  177
                                    61        71        81        91       101       111       121       131       141       151       161       171
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4PKH)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4PKH)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4PKH)

(-) Gene Ontology  (92, 103)

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  4pkh
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  ACTS_RABIT | P68135
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  GELS_HUMAN | P06396
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  TMOD1_HUMAN | P28289
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ACTS_RABIT | P68135: 1alm 1atn 1eqy 1esv 1h1v 1ijj 1j6z 1kxp 1lcu 1lot 1m8q 1ma9 1mvw 1nwk 1o18 1o19 1o1a 1o1b 1o1c 1o1d 1o1e 1o1f 1o1g 1p8z 1qz5 1qz6 1rdw 1rfq 1rgi 1s22 1sqk 1t44 1uy5 1wua 1y64 1yxq 2a3z 2a40 2a41 2a42 2a5x 2asm 2aso 2asp 2d1k 2ff3 2ff6 2fxu 2gwj 2gwk 2hmp 2pav 2pbd 2q0r 2q0u 2q1n 2q31 2q36 2q97 2v51 2v52 2vcp 2vyp 2w49 2w4u 2y83 2yje 2yjf 2zwh 3b5u 3buz 3cjb 3cjc 3daw 3ffk 3g37 3hbt 3j4k 3j8a 3j8i 3j8j 3j8k 3jbi 3jbj 3jbk 3m1f 3m3n 3m6g 3mfp 3mn5 3sjh 3tpq 3tu5 3u8x 3u9z 3ue5 4a7f 4a7h 4a7l 4a7n 4b1v 4b1w 4b1x 4b1y 4b1z 4eah 4gy2 4h03 4h0t 4h0v 4h0x 4h0y 4k41 4k42 4k43 4pkg 4pki 4pl8 4v0u 4wyb 4z94 5h53 5jlf 5kg8
        GELS_HUMAN | P06396: 1c0f 1c0g 1d4x 1dej 1eqy 1esv 1h1v 1kcq 1mdu 1nlv 1nm1 1nmd 1p8x 1p8z 1sol 1t44 1yag 1yvn 2ff3 2ff6 2fh1 2fh2 2fh3 2fh4 3a5l 3a5m 3a5n 3a5o 3ci5 3cip 3cjb 3cjc 3ffk 3ffn 3tu5 4pkg 4pki 4s10 4z94 5dd2 5fae 5faf
        TMOD1_HUMAN | P28289: 4pkg 4pki 4z8g 4z94

(-) Related Entries Specified in the PDB File

4pkg 4pki