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(-) Description

Title :  STRUCTURE OF MAL-RPEL1 COMPLEXED TO ACTIN
 
Authors :  S. Mouilleron, S. Guettler, C. A. Langer, R. Treisman, N. Q. Mcdonald
Date :  01 Oct 08  (Deposition) - 25 Nov 08  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.35
Chains :  Asym./Biol. Unit :  B,D,E,F
Keywords :  Structural Protein-Contractile Protein Complex, Contractile Protein, Structural Protein, Nucleotide-Binding, Transcription Regulation, Transcription, Phosphoprotein, Muscle Protein, Methylation, Atp-Binding, Cytoskeleton, Mal, Rpel, Actin, Nucleus (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  S. Mouilleron, S. Guettler, C. A. Langer, R. Treisman, N. Q. Mcdonald
Molecular Basis For G-Actin Binding To Rpel Motifs From The Serum Response Factor Coactivator Mal.
Embo J. V. 27 3198 2008
PubMed-ID: 19008859  |  Reference-DOI: 10.1038/EMBOJ.2008.235

(-) Compounds

Molecule 1 - ACTIN, ALPHA SKELETAL MUSCLE
    ChainsB, D
    Organism CommonRABBIT
    Organism ScientificORYCTOLAGUS CUNICULUS
    Organism Taxid9986
    SynonymALPHA-ACTIN-1
    TissueSKELETAL MUSCLE
 
Molecule 2 - MKL/MYOCARDIN-LIKE PROTEIN 1
    ChainsE, F
    FragmentRPEL1 MOTIF, RESIDUES 16-41
    Organism CommonMOUSE
    Organism ScientificMUS MUSCULUS
    Organism Taxid10090
    SynonymMYOCARDIN-RELATED TRANSCRIPTION FACTOR A, MEGAKARYOBLASTIC LEUKEMIA 1 PROTEIN HOMOLOG, BASIC SAP COILED-COIL TRANSCRIPTION ACTIVATOR
    SyntheticYES

 Structural Features

(-) Chains, Units

  1234
Asymmetric/Biological Unit BDEF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (5, 12)

Asymmetric/Biological Unit (5, 12)
No.NameCountTypeFull Name
1ATP2Ligand/IonADENOSINE-5'-TRIPHOSPHATE
2CA2Ligand/IonCALCIUM ION
3LAB2Ligand/IonLATRUNCULIN B
4PEG2Ligand/IonDI(HYDROXYETHYL)ETHER
5SCN4Ligand/IonTHIOCYANATE ION

(-) Sites  (10, 10)

Asymmetric Unit (10, 10)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLY B:13 , SER B:14 , GLY B:15 , LEU B:16 , LYS B:18 , GLY B:156 , ASP B:157 , GLY B:158 , VAL B:159 , GLY B:182 , ARG B:210 , LYS B:213 , GLU B:214 , GLY B:301 , GLY B:302 , MET B:305 , TYR B:306 , LYS B:336 , CA B:1373 , LAB B:1374 , HOH B:2038 , HOH B:2076 , HOH B:2093 , HOH B:2101 , HOH B:2102 , HOH B:2103BINDING SITE FOR RESIDUE ATP B1372
02AC2SOFTWAREATP B:1372 , HOH B:2002 , HOH B:2003 , HOH B:2038 , HOH B:2102BINDING SITE FOR RESIDUE CA B1373
03AC3SOFTWAREGLY D:13 , SER D:14 , GLY D:15 , LEU D:16 , LYS D:18 , GLY D:156 , ASP D:157 , GLY D:158 , VAL D:159 , GLY D:182 , ARG D:210 , LYS D:213 , GLU D:214 , GLY D:301 , GLY D:302 , MET D:305 , TYR D:306 , LYS D:336 , CA D:1373 , LAB D:1374 , HOH D:2042 , HOH D:2043 , HOH D:2049 , HOH D:2080 , HOH D:2093 , HOH D:2095 , HOH D:2096BINDING SITE FOR RESIDUE ATP D1372
04AC4SOFTWAREATP D:1372 , HOH D:2003 , HOH D:2004 , HOH D:2042 , HOH D:2049BINDING SITE FOR RESIDUE CA D1373
05AC5SOFTWAREGLY B:15 , PRO B:32 , TYR B:69 , ASP B:157 , THR B:186 , ARG B:206 , GLU B:207 , ARG B:210 , LYS B:213 , ATP B:1372BINDING SITE FOR RESIDUE LAB B1374
06AC6SOFTWARELYS B:238 , ARG B:254BINDING SITE FOR RESIDUE PEG B1375
07AC7SOFTWAREGLY D:15 , ILE D:34 , TYR D:69 , ASP D:157 , ARG D:183 , THR D:186 , ARG D:206 , GLU D:207 , ARG D:210 , LYS D:213 , ATP D:1372 , HOH D:2097BINDING SITE FOR RESIDUE LAB D1374
08AC8SOFTWAREGLY B:197 , SER B:199BINDING SITE FOR RESIDUE SCN B1376
09AC9SOFTWAREGLY D:197 , SER D:199BINDING SITE FOR RESIDUE SCN D1375
10BC1SOFTWARETRP B:79BINDING SITE FOR RESIDUE SCN B1377

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2V51)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Ser D:60 -Lys D:61
2Asp D:244 -Gly D:245

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2V51)

(-) PROSITE Motifs  (4, 8)

Asymmetric/Biological Unit (4, 8)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1RPELPS51073 RPEL repeat profile.MKL1_MOUSE15-40
 
59-84
103-128
  2E:73-97
F:73-97
-
-
2ACTINS_1PS00406 Actins signature 1.ACTS_RABIT55-65
 
  2B:53-60
D:53-61
3ACTINS_ACT_LIKEPS01132 Actins and actin-related proteins signature.ACTS_RABIT106-118
 
  2B:104-116
D:104-116
4ACTINS_2PS00432 Actins signature 2.ACTS_RABIT358-366
 
  2B:356-364
D:356-364

(-) Exons   (0, 0)

(no "Exon" information available for 2V51)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain B from PDB  Type:PROTEIN  Length:351
 aligned with ACTS_RABIT | P68135 from UniProtKB/Swiss-Prot  Length:377

    Alignment length:367
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       
           ACTS_RABIT     7 TTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVH 373
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2v51B01 B:5-136,B:335-371  [code=3.            30.420.40    , no name defined]                                                      2v51B02 B:137-180,B:270-334                 2v51B03 B:181-269 Actin; Chain A, domain 4                                               2v51B02 B:137-180,B:270-334  [code=3.30.420.40, no name defined] 2v51B01 B:5-136,B:335-371             CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeee...eeeeee.......eeee..ee...------------.eehhhhhh----..ee..ee..ee.hhhhhhhhhhhhhhh....hhhhh.eeeee....hhhhhhhhhhhhhhh....eeeeeehhhhhhhhh....eeeeee....eeeeeee..ee.hhhheee..hhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh....hhhhhhhhhhhh....eeee.....eeee.hhhhhhhhh..hhhhhh....hhhhhhhhhhhh.hhhhhhhhhh.eeeehhhhhh.hhhhhhhhhhhhhh.......ee......hhhhhhhhhhhhhhhhhhh.eehhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------ACTINS_1   ----------------------------------------ACTINS_ACT_LI-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTINS_2 ------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2v51 B   5 TTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPR------------SYVGDEAQS----LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVH 371
                                    14        24        34    |    -       |54     |   -|       74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       
                                                             39           52      60   65                                                                                                                                                                                                                                                                                                                  

Chain D from PDB  Type:PROTEIN  Length:352
 aligned with ACTS_RABIT | P68135 from UniProtKB/Swiss-Prot  Length:377

    Alignment length:367
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       
           ACTS_RABIT     7 TTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVH 373
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2v51D01 D:5-136,D:335-371  [code=3.            30.420.40,    no name defined]                                                       2v51D02 D:137-180,D:270-334                 2v51D03 D:181-269 Actin; Chain A, domain 4                                               2v51D02 D:137-180,D:270-334  [code=3.30.420.40, no name defined] 2v51D01 D:5-136,D:335-371             CATH domains
           Pfam domains (1) Actin-2v51D01 D:5-371                                                                                                                                                                                                                                                                                                                                                           Pfam domains (1)
           Pfam domains (2) Actin-2v51D02 D:5-371                                                                                                                                                                                                                                                                                                                                                           Pfam domains (2)
         Sec.struct. author ...eeeee...eeeeee.......eeee..eee..------------.eehhhhhh.---.eee..ee..ee.hhhhhhhhhhhhhhh....hhhhh.eeeee....hhhhhhhhhhhhhhh....eeeeeehhhhhhhhh....eeeeee....eeeeeee..ee.hhhheee..hhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh....hhhhhhhhhhhh....eeee.....eeee.hhhhhhhhh..hhhhhh....hhhhhhhhhhhh.hhhhhhhhhh.eeeehhhhh..hhhhhhhhhhhhhh.......ee......hhhhhhhhhhhhhhhhhhh.eehhhhhh.hhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------ACTINS_1   ----------------------------------------ACTINS_ACT_LI-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTINS_2 ------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2v51 D   5 TTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPR------------SYVGDEAQSK---LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVH 371
                                    14        24        34    |    -       |54      |  -|       74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       
                                                             39           52       61  65                                                                                                                                                                                                                                                                                                                  

Chain E from PDB  Type:PROTEIN  Length:28
 aligned with MKL1_MOUSE | Q8K4J6 from UniProtKB/Swiss-Prot  Length:964

    Alignment length:28
                                    22        32        
           MKL1_MOUSE    13 VQSVLQLKLQQRRTREELVSQGIMPPLK  40
               SCOP domains ---------------------------- SCOP domains
               CATH domains ---------------------------- CATH domains
               Pfam domains ---------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhh.hhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) ---------------------------- SAPs(SNPs)
                    PROSITE --RPEL  PDB: E:73-97         PROSITE
                 Transcript ---------------------------- Transcript
                 2v51 E  70 RKNVLQLKLQQRRTREELVSQGIMPPLK  97
                                    79        89        

Chain F from PDB  Type:PROTEIN  Length:28
 aligned with MKL1_MOUSE | Q8K4J6 from UniProtKB/Swiss-Prot  Length:964

    Alignment length:28
                                    22        32        
           MKL1_MOUSE    13 VQSVLQLKLQQRRTREELVSQGIMPPLK  40
               SCOP domains ---------------------------- SCOP domains
               CATH domains ---------------------------- CATH domains
           Pfam domains (1) ---RPEL-2v51F01 F:73-97      Pfam domains (1)
           Pfam domains (2) ---RPEL-2v51F02 F:73-97      Pfam domains (2)
         Sec.struct. author .hhhhhhhhhh..hhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) ---------------------------- SAPs(SNPs)
                    PROSITE --RPEL  PDB: F:73-97         PROSITE
                 Transcript ---------------------------- Transcript
                 2v51 F  70 RKNVLQLKLQQRRTREELVSQGIMPPLK  97
                                    79        89        

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2V51)

(-) CATH Domains  (2, 6)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (2, 4)

Asymmetric/Biological Unit

(-) Gene Ontology  (39, 41)

Asymmetric/Biological Unit(hide GO term definitions)
Chain B,D   (ACTS_RABIT | P68135)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0048306    calcium-dependent protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules), in the presence of calcium.
    GO:0042802    identical protein binding    Interacting selectively and non-covalently with an identical protein or proteins.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
    GO:0090131    mesenchyme migration    The process in which the population of cells that make up a mesenchyme undergo directed movement.
    GO:0010628    positive regulation of gene expression    Any process that increases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA or circRNA (for protein-coding genes) and the translation of that mRNA or circRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form.
    GO:0048741    skeletal muscle fiber development    The process whose specific outcome is the progression of the skeletal muscle fiber over time, from its formation to the mature structure. Muscle fibers are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast.
    GO:0030240    skeletal muscle thin filament assembly    The aggregation, arrangement and bonding together of proteins to form the actin-based thin filaments of myofibrils in skeletal muscle.
cellular component
    GO:0005884    actin filament    A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane.
    GO:0044297    cell body    The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections.
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005856    cytoskeleton    Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles.
    GO:0030175    filopodium    Thin, stiff, actin-based protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal or dendritic growth cone, or a dendritic shaft.
    GO:0030027    lamellipodium    A thin sheetlike process extended by the leading edge of a migrating cell or extending cell process; contains a dense meshwork of actin filaments.
    GO:0001725    stress fiber    A contractile actin filament bundle that consists of short actin filaments with alternating polarity, cross-linked by alpha-actinin and possibly other actin bundling proteins, and with myosin present in a periodic distribution along the fiber.
    GO:0005865    striated muscle thin filament    Filaments formed of actin and associated proteins; attached to Z discs at either end of sarcomeres in myofibrils.

Chain E,F   (MKL1_MOUSE | Q8K4J6)
molecular function
    GO:0001105    RNA polymerase II transcription coactivator activity    Interacting selectively and non-covalently with an RNA polymerase II (RNAP II) regulatory transcription factor and also with the RNAP II basal transcription machinery in order to increase the frequency, rate or extent of transcription. Cofactors generally do not bind DNA, but rather mediate protein-protein interactions between activating transcription factors and the basal RNAP II transcription machinery.
    GO:0003779    actin binding    Interacting selectively and non-covalently with monomeric or multimeric forms of actin, including actin filaments.
    GO:0003785    actin monomer binding    Interacting selectively and non-covalently with monomeric actin, also known as G-actin.
    GO:0043522    leucine zipper domain binding    Interacting selectively and non-covalently with a leucine zipper domain, a protein secondary structure exhibiting a periodic repetition of leucine residues at every seventh position over a distance covering eight helical turns.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0003713    transcription coactivator activity    Interacting selectively and non-covalently with a activating transcription factor and also with the basal transcription machinery in order to increase the frequency, rate or extent of transcription. Cofactors generally do not bind the template nucleic acid, but rather mediate protein-protein interactions between activating transcription factors and the basal transcription machinery.
    GO:0003700    transcription factor activity, sequence-specific DNA binding    Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
    GO:0000976    transcription regulatory region sequence-specific DNA binding    Interacting selectively and non-covalently with a specific sequence of DNA that is part of a regulatory region that controls transcription of that section of the DNA. The transcribed region might be described as a gene, cistron, or operon.
biological process
    GO:0030036    actin cytoskeleton organization    A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins.
    GO:0030900    forebrain development    The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions).
    GO:2001234    negative regulation of apoptotic signaling pathway    Any process that stops, prevents or reduces the frequency, rate or extent of apoptotic signaling pathway.
    GO:0043154    negative regulation of cysteine-type endopeptidase activity involved in apoptotic process    Any process that stops, prevents, or reduces the frequency, rate or extent of a cysteine-type endopeptidase activity involved in the apoptotic process.
    GO:0001764    neuron migration    The characteristic movement of an immature neuron from germinal zones to specific positions where they will reside as they mature.
    GO:0031175    neuron projection development    The process whose specific outcome is the progression of a neuron projection over time, from its formation to the mature structure. A neuron projection is any process extending from a neural cell, such as axons or dendrites (collectively called neurites).
    GO:0045944    positive regulation of transcription from RNA polymerase II promoter    Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
    GO:0010735    positive regulation of transcription via serum response element binding    Any process that increases the frequency, rate or extent of the specifically regulated synthesis of RNA from DNA encoding a specific set of genes as a result of a transcription factor interacting with a serum response element (SRE). A serum response element is a short sequence with dyad symmetry found in the promoters of some of the cellular immediate-early genes, regulated by serum.
    GO:0045893    positive regulation of transcription, DNA-templated    Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.
    GO:0006357    regulation of transcription from RNA polymerase II promoter    Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter.
    GO:0006355    regulation of transcription, DNA-templated    Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
    GO:0051145    smooth muscle cell differentiation    The process in which a relatively unspecialized cell acquires specialized features of a smooth muscle cell; smooth muscle lacks transverse striations in its constituent fibers and are almost always involuntary.
    GO:0006351    transcription, DNA-templated    The cellular synthesis of RNA on a template of DNA.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005654    nucleoplasm    That part of the nuclear content other than the chromosomes or the nucleolus.
    GO:0005634    nucleus    A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ACTS_RABIT | P681351alm 1atn 1eqy 1esv 1h1v 1ijj 1j6z 1kxp 1lcu 1lot 1m8q 1ma9 1mvw 1nwk 1o18 1o19 1o1a 1o1b 1o1c 1o1d 1o1e 1o1f 1o1g 1p8z 1qz5 1qz6 1rdw 1rfq 1rgi 1s22 1sqk 1t44 1uy5 1wua 1y64 1yxq 2a3z 2a40 2a41 2a42 2a5x 2asm 2aso 2asp 2d1k 2ff3 2ff6 2fxu 2gwj 2gwk 2hmp 2pav 2pbd 2q0r 2q0u 2q1n 2q31 2q36 2q97 2v52 2vcp 2vyp 2w49 2w4u 2y83 2yje 2yjf 2zwh 3b5u 3buz 3cjb 3cjc 3daw 3ffk 3g37 3hbt 3j4k 3j8a 3j8i 3j8j 3j8k 3jbi 3jbj 3jbk 3m1f 3m3n 3m6g 3mfp 3mn5 3sjh 3tpq 3tu5 3u8x 3u9z 3ue5 4a7f 4a7h 4a7l 4a7n 4b1v 4b1w 4b1x 4b1y 4b1z 4eah 4gy2 4h03 4h0t 4h0v 4h0x 4h0y 4k41 4k42 4k43 4pkg 4pkh 4pki 4pl8 4v0u 4wyb 4z94 5h53 5jlf 5kg8
        MKL1_MOUSE | Q8K4J62v52 2yje 2yjf

(-) Related Entries Specified in the PDB File

1alm THE STRUCTURE OF THE ACTO-MYOSIN SUBFRAGMENT -ONE COMPLEX. RESULTS OF SEARCHES USING DATA FROM ELECTRON MICROSCOPY AND X-RAY CRYSTALLOGRAPHY. THEORETICAL MODEL, ALPHA CARBONS.
1atn DEOXYRIBONUCLEASE I COMPLEX WITH ACTIN
1eqy COMPLEX BETWEEN RABBIT MUSCLE ALPHA-ACTIN: HUMAN GELSOLIN DOMAIN 1
1esv COMPLEX BETWEEN LATRUNCULIN A:RABBIT MUSCLE ALPHA ACTIN:HUMAN GELSOLIN DOMAIN 1
1h1v GELSOLIN G4-G6/ACTIN COMPLEX
1ijj THE X-RAY CRYSTAL STRUCTURE OF THE COMPLEX BETWEEN RABBITSKELETAL MUSCLE ACTIN AND LATRUNCULIN A AT 2.85 ARESOLUTION
1j6z UNCOMPLEXED ACTIN
1kxp CRYSTAL STRUCTURE OF HUMAN VITAMIN D-BINDING PROTEIN INCOMPLEX WITH SKELETAL ACTIN
1lcu POLYLYSINE INDUCES AN ANTIPARALLEL ACTIN DIMER THATNUCLEATES FILAMENT ASSEMBLY: CRYSTAL STRUCTURE AT 3.5 ARESOLUTION
1lot CRYSTAL STRUCTURE OF THE COMPLEX OF ACTIN WITH VITAMIN D-BINDING PROTEIN
1m8q MOLECULAR MODELS OF AVERAGED RIGOR CROSSBRIDGES FROMTOMOGRAMS OF INSECT FLIGHT MUSCLE
1ma9 CRYSTAL STRUCTURE OF THE COMPLEX OF HUMAN VITAMIN D BINDINGPROTEIN AND RABBIT MUSCLE ACTIN
1mvw MOLECULAR MODELS OF AVERAGED RIGOR CROSSBRIDGES FROMTOMOGRAMS OF INSECT FLIGHT MUSCLE
1nwk CRYSTAL STRUCTURE OF MONOMERIC ACTIN IN THE ATP STATE
1o18 MOLECULAR MODELS OF AVERAGED RIGOR CROSSBRIDGES FROMTOMOGRAMS OF INSECT FLIGHT MUSCLE
1o19 MOLECULAR MODELS OF AVERAGED RIGOR CROSSBRIDGES FROMTOMOGRAMS OF INSECT FLIGHT MUSCLE
1o1a MOLECULAR MODELS OF AVERAGED RIGOR CROSSBRIDGES FROMTOMOGRAMS OF INSECT FLIGHT MUSCLE
1o1b MOLECULAR MODELS OF AVERAGED RIGOR CROSSBRIDGES FROMTOMOGRAMS OF INSECT FLIGHT MUSCLE
1o1c MOLECULAR MODELS OF AVERAGED RIGOR CROSSBRIDGES FROMTOMOGRAMS OF INSECT FLIGHT MUSCLE
1o1d MOLECULAR MODELS OF AVERAGED RIGOR CROSSBRIDGES FROMTOMOGRAMS OF INSECT FLIGHT MUSCLE
1o1e MOLECULAR MODELS OF AVERAGED RIGOR CROSSBRIDGES FROMTOMOGRAMS OF INSECT FLIGHT MUSCLE
1o1f MOLECULAR MODELS OF AVERAGED RIGOR CROSSBRIDGES FROMTOMOGRAMS OF INSECT FLIGHT MUSCLE
1o1g MOLECULAR MODELS OF AVERAGED RIGOR CROSSBRIDGES FROMTOMOGRAMS OF INSECT FLIGHT MUSCLE
1p8z COMPLEX BETWEEN RABBIT MUSCLE ALPHA-ACTIN: HUMAN GELSOLINRESIDUES VAL26-GLU156
1qz5 STRUCTURE OF RABBIT ACTIN IN COMPLEX WITH KABIRAMIDE C
1qz6 STRUCTURE OF RABBIT ACTIN IN COMPLEX WITH JASPISAMIDE A
1rdw ACTIN CRYSTAL DYNAMICS: STRUCTURAL IMPLICATIONS FOR F-ACTINNUCLEATION, POLYMERIZATION AND BRANCHING MEDIATED BY THEANTI-PARALLEL DIMER
1rfq ACTIN CRYSTAL DYNAMICS: STRUCTURAL IMPLICATIONS FOR F-ACTINNUCLEATION, POLYMERIZATION AND BRANCHING MEDIATED BY THEANTI-PARALLEL DIMER
1rgi CRYSTAL STRUCTURE OF GELSOLIN DOMAINS G1-G3 BOUND TO ACTIN
1s22 ABSOLUTE STEREOCHEMISTRY OF ULAPUALIDE A
1sqk CRYSTAL STRUCTURE OF CIBOULOT IN COMPLEX WITH SKELETAL ACTIN
1t44 STRUCTURAL BASIS OF ACTIN SEQUESTRATION BY THYMOSIN-B4:IMPLICATIONS FOR ARP2/3 ACTIVATION
1uy5 A MODEL OF THYMOSIN_BETA4 BOUND TO MONOMERIC ACTIN USING NMR AND BIOCHEMICAL DATA.
1wua THE STRUCTURE OF APLYRONINE A-ACTIN COMPLEX
1y64 BNI1P FORMIN HOMOLOGY 2 DOMAIN COMPLEXED WITH ATP-ACTIN
2a3z TERNARY COMPLEX OF THE WH2 DOMAIN OF WASP WITH ACTIN-DNASE I
2a40 TERNARY COMPLEX OF THE WH2 DOMAIN OF WAVE WITH ACTIN-DNASE I
2a41 TERNARY COMPLEX OF THE WH2 DOMAIN OF WIP WITH ACTIN-DNASE I
2a42 ACTIN-DNASE I COMPLEX
2a5x CRYSTAL STRUCTURE OF A CROSS-LINKED ACTIN DIMER
2asm STRUCTURE OF RABBIT ACTIN IN COMPLEX WITH REIDISPONGIOLIDE A
2aso STRUCTURE OF RABBIT ACTIN IN COMPLEX WITH SPHINXOLIDE B
2asp STRUCTURE OF RABBIT ACTIN IN COMPLEX WITH REIDISPONGIOLIDE C
2d1k TERNARY COMPLEX OF THE WH2 DOMAIN OF MIM WITH ACTIN-DNASE I
2ff3 CRYSTAL STRUCTURE OF GELSOLIN DOMAIN 1:N- WASP V2 MOTIFHYBRID IN COMPLEX WITH ACTIN
2ff6 CRYSTAL STRUCTURE OF GELSOLIN DOMAIN 1: CIBOULOT DOMAIN 2HYBRID IN COMPLEX WITH ACTIN
2fxu X-RAY STRUCTURE OF BISTRAMIDE A- ACTIN COMPLEX AT 1.35 ARESOLUTION.
2v52 STRUCTURE OF MAL-RPEL2 COMPLEXED TO G- ACTIN
2vcp CRYSTAL STRUCTURE OF N-WASP VC DOMAIN IN COMPLEX WITH SKELETAL ACTIN
2vyp RABBIT-MUSCLE G-ACTIN IN COMPLEX WITH MYXOBACTERIAL RHIZOPODIN