2A40 - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Biological Unit 3 (Jmol Viewer)

Title :   TERNARY COMPLEX OF THE WH2 DOMAIN OF WAVE WITH ACTIN-DNASE I

Authors :   D. Chereau, F. Kerff, R. Dominguez

Date :   27 Jun 05 (Deposition) - 01 Nov 05 (Release) - 13 Jul 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.80

Chains :   Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,B,C  (1x)
Biol. Unit 2: D,E,F  (1x)
Biol. Unit 3: A,B,C,D,E,F  (1x)

Keywords :   Wave, Wh2, Wasp, Actin, Dnase I, Arp2/3, Structural Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   D. Chereau, F. Kerff, P. Graceffa, Z. Grabarek, K. Langsetmo, R. Dominguez
Actin-Bound Structures Of Wiskott-Aldrich Syndrome Protein (Wasp)-Homology Domain 2 And The Implications For Filament Assembly
Proc. Natl. Acad. Sci. Usa V. 102 16644 2005
PubMed-ID: 16275905 | Reference-DOI: 10.1073/PNAS.0507021102

Molecule 1 - ACTIN, ALPHA SKELETAL MUSCLE
	Chains	:	A, D
	Organism Common	:	RABBIT
	Organism Scientific	:	ORYCTOLAGUS CUNICULUS
	Organism Taxid	:	9986
	Other Details	:	SKELETAL MUSCLE
	Synonym	:	ALPHA-ACTIN 1

Molecule 2 - DEOXYRIBONUCLEASE-1
	Chains	:	B, E
	EC Number	:	3.1.21.1
	Organism Common	:	CATTLE
	Organism Scientific	:	BOS TAURUS
	Organism Taxid	:	9913
	Other Details	:	PANCREAS
	Synonym	:	DEOXYRIBONUCLEASE I, DNASE I

Molecule 3 - WISKOTT-ALDRICH SYNDROME PROTEIN FAMILY MEMBER 2
	Chains	:	C, F
	Engineered	:	YES
	Fragment	:	WH2 DOMAIN, RESIDUES 433-464
	Other Details	:	THIS SEQUENCE OCCURS NATURALLY IN HOMO SAPIENS (HUMANS)
	Synonym	:	WASP-FAMILY PROTEIN MEMBER 2, WAVE-2 PROTEIN, VERPROLIN HOMOLOGY DOMAIN-CONTAINING PROTEIN 2
	Synthetic	:	YES

		1	2	3	4	5	6
Asymmetric Unit	:	A	B	C	D	E	F
Biological Unit 1 (1x)	:	A	B	C
Biological Unit 2 (1x)	:				D	E	F
Biological Unit 3 (1x)	:	A	B	C	D	E	F

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (6, 16)

No.	Name	Count	Type	Full Name
1	ATP	2	Ligand/Ion	ADENOSINE-5'-TRIPHOSPHATE
2	CA	4	Ligand/Ion	CALCIUM ION
3	GOL	2	Ligand/Ion	GLYCEROL
4	HIC	2	Mod. Amino Acid	4-METHYL-HISTIDINE
5	MG	2	Ligand/Ion	MAGNESIUM ION
6	NAG	4	Ligand/Ion	N-ACETYL-D-GLUCOSAMINE

Biological Unit 1 (4, 6)

No.	Name	Count	Type	Full Name
1	ATP	1	Ligand/Ion	ADENOSINE-5'-TRIPHOSPHATE
2	CA	-1	Ligand/Ion	CALCIUM ION
3	GOL	2	Ligand/Ion	GLYCEROL
4	HIC	1	Mod. Amino Acid	4-METHYL-HISTIDINE
5	MG	-1	Ligand/Ion	MAGNESIUM ION
6	NAG	2	Ligand/Ion	N-ACETYL-D-GLUCOSAMINE

Biological Unit 2 (3, 4)

No.	Name	Count	Type	Full Name
1	ATP	1	Ligand/Ion	ADENOSINE-5'-TRIPHOSPHATE
2	CA	-1	Ligand/Ion	CALCIUM ION
3	GOL	-1	Ligand/Ion	GLYCEROL
4	HIC	1	Mod. Amino Acid	4-METHYL-HISTIDINE
5	MG	-1	Ligand/Ion	MAGNESIUM ION
6	NAG	2	Ligand/Ion	N-ACETYL-D-GLUCOSAMINE

Biological Unit 3 (4, 10)

No.	Name	Count	Type	Full Name
1	ATP	2	Ligand/Ion	ADENOSINE-5'-TRIPHOSPHATE
2	CA	-1	Ligand/Ion	CALCIUM ION
3	GOL	2	Ligand/Ion	GLYCEROL
4	HIC	2	Mod. Amino Acid	4-METHYL-HISTIDINE
5	MG	-1	Ligand/Ion	MAGNESIUM ION
6	NAG	4	Ligand/Ion	N-ACETYL-D-GLUCOSAMINE

Asymmetric Unit (14, 14)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	ASN B:18 , ALA B:248 , NAG B:271 , HOH B:1446	BINDING SITE FOR RESIDUE NAG B 270
02	AC2	SOFTWARE	MET B:245 , NAG B:270 , HOH B:1504	BINDING SITE FOR RESIDUE NAG B 271
03	AC3	SOFTWARE	ASN E:18 , LEU E:21 , ALA E:248 , NAG E:271 , HOH E:1457	BINDING SITE FOR RESIDUE NAG E 270
04	AC4	SOFTWARE	MET E:245 , NAG E:270 , HOH E:1411	BINDING SITE FOR RESIDUE NAG E 271
05	AC5	SOFTWARE	ATP A:1379 , HOH A:1384 , HOH A:1385 , HOH A:1387 , HOH A:1391 , HOH A:1395	BINDING SITE FOR RESIDUE CA A 1381
06	AC6	SOFTWARE	ASP B:201 , THR B:203 , THR B:205 , THR B:207 , HOH B:1388 , HOH B:1491	BINDING SITE FOR RESIDUE CA B 1273
07	AC7	SOFTWARE	ATP D:1380 , HOH D:1383 , HOH D:1385 , HOH D:1387 , HOH D:1389 , HOH D:1394	BINDING SITE FOR RESIDUE CA D 1382
08	AC8	SOFTWARE	ASP E:201 , THR E:203 , THR E:205 , THR E:207 , HOH E:1276 , HOH E:1278	BINDING SITE FOR RESIDUE CA E 1272
09	AC9	SOFTWARE	ASP B:172 , ASP B:198 , HOH B:1409 , HOH B:1490 , HOH B:1492 , HOH B:1493	BINDING SITE FOR RESIDUE MG B 1274
10	BC1	SOFTWARE	ASP E:172 , ASP E:198 , HOH E:1280 , HOH E:1371 , HOH E:1372 , HOH E:1373	BINDING SITE FOR RESIDUE MG E 1275
11	BC2	SOFTWARE	GLY A:13 , SER A:14 , GLY A:15 , LEU A:16 , LYS A:18 , GLY A:156 , ASP A:157 , GLY A:158 , VAL A:159 , GLY A:182 , ARG A:210 , LYS A:213 , GLU A:214 , GLY A:301 , GLY A:302 , THR A:303 , MET A:305 , TYR A:306 , LYS A:336 , CA A:1381 , HOH A:1386 , HOH A:1387 , HOH A:1391 , HOH A:1395 , HOH A:1402 , HOH A:1412 , HOH A:1515 , HOH A:1581	BINDING SITE FOR RESIDUE ATP A 1379
12	BC3	SOFTWARE	GLY D:13 , SER D:14 , GLY D:15 , LEU D:16 , LYS D:18 , GLY D:156 , ASP D:157 , GLY D:158 , VAL D:159 , GLY D:182 , LYS D:213 , GLU D:214 , GLY D:301 , GLY D:302 , THR D:303 , MET D:305 , TYR D:306 , LYS D:336 , CA D:1382 , HOH D:1384 , HOH D:1387 , HOH D:1394 , HOH D:1400 , HOH D:1403 , HOH D:1411 , HOH D:1520 , HOH D:1599	BINDING SITE FOR RESIDUE ATP D 1380
13	BC4	SOFTWARE	MET A:47 , HOH A:1663 , ASP B:93 , THR B:94 , GLU E:127	BINDING SITE FOR RESIDUE GOL A 1383
14	BC5	SOFTWARE	THR A:202 , THR A:203 , ALA A:204 , GLY B:12 , GLU B:13 , ARG B:41 , ASP B:42 , SER B:43 , HOH B:1445	BINDING SITE FOR RESIDUE GOL B 1384

Asymmetric Unit

No.	Residues
1	B:101	-	B:104
2	B:173	-	B:209
3	E:101	-	E:104
4	E:173	-	E:209

(no "Cis Peptide Bond" information available for 2A40)

Asymmetric Unit (1, 2)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_DNAS1_BOVIN_001 *	H	143	P	DNAS1_BOVIN	---	---	B/E	H	121	P
	* ID not provided by source

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 1 (1, 1)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_DNAS1_BOVIN_001 *	H	143	P	DNAS1_BOVIN	---	---	B	H	121	P
	* ID not provided by source

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 2 (1, 1)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_DNAS1_BOVIN_001 *	H	143	P	DNAS1_BOVIN	---	---	E	H	121	P
	* ID not provided by source

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 3 (1, 2)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_DNAS1_BOVIN_001 *	H	143	P	DNAS1_BOVIN	---	---	B/E	H	121	P
	* ID not provided by source

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Asymmetric Unit (6, 12)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ACTINS_1	PS00406	Actins signature 1.	ACTS_RABIT	55-65	2	A:53-63 D:53-63
2	ACTINS_ACT_LIKE	PS01132	Actins and actin-related proteins signature.	ACTS_RABIT	106-118	2	A:104-116 D:104-116
3	DNASE_I_1	PS00919	Deoxyribonuclease I signature 1.	DNAS1_BOVIN	152-172	2	B:130-150 E:130-150
4	DNASE_I_2	PS00918	Deoxyribonuclease I signature 2.	DNAS1_BOVIN	189-196	2	B:167-174 E:167-174
5	ACTINS_2	PS00432	Actins signature 2.	ACTS_RABIT	358-366	2	A:356-364 D:356-364
6	WH2	PS51082	WH2 domain profile.	WASF2_HUMAN	436-453	2	C:435-452 F:435-452

Biological Unit 1 (6, 6)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ACTINS_1	PS00406	Actins signature 1.	ACTS_RABIT	55-65	1	A:53-63 -
2	ACTINS_ACT_LIKE	PS01132	Actins and actin-related proteins signature.	ACTS_RABIT	106-118	1	A:104-116 -
3	DNASE_I_1	PS00919	Deoxyribonuclease I signature 1.	DNAS1_BOVIN	152-172	1	B:130-150 -
4	DNASE_I_2	PS00918	Deoxyribonuclease I signature 2.	DNAS1_BOVIN	189-196	1	B:167-174 -
5	ACTINS_2	PS00432	Actins signature 2.	ACTS_RABIT	358-366	1	A:356-364 -
6	WH2	PS51082	WH2 domain profile.	WASF2_HUMAN	436-453	1	C:435-452 -

Biological Unit 2 (6, 6)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ACTINS_1	PS00406	Actins signature 1.	ACTS_RABIT	55-65	1	- D:53-63
2	ACTINS_ACT_LIKE	PS01132	Actins and actin-related proteins signature.	ACTS_RABIT	106-118	1	- D:104-116
3	DNASE_I_1	PS00919	Deoxyribonuclease I signature 1.	DNAS1_BOVIN	152-172	1	- E:130-150
4	DNASE_I_2	PS00918	Deoxyribonuclease I signature 2.	DNAS1_BOVIN	189-196	1	- E:167-174
5	ACTINS_2	PS00432	Actins signature 2.	ACTS_RABIT	358-366	1	- D:356-364
6	WH2	PS51082	WH2 domain profile.	WASF2_HUMAN	436-453	1	- F:435-452

Biological Unit 3 (6, 12)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ACTINS_1	PS00406	Actins signature 1.	ACTS_RABIT	55-65	2	A:53-63 D:53-63
2	ACTINS_ACT_LIKE	PS01132	Actins and actin-related proteins signature.	ACTS_RABIT	106-118	2	A:104-116 D:104-116
3	DNASE_I_1	PS00919	Deoxyribonuclease I signature 1.	DNAS1_BOVIN	152-172	2	B:130-150 E:130-150
4	DNASE_I_2	PS00918	Deoxyribonuclease I signature 2.	DNAS1_BOVIN	189-196	2	B:167-174 E:167-174
5	ACTINS_2	PS00432	Actins signature 2.	ACTS_RABIT	358-366	2	A:356-364 D:356-364
6	WH2	PS51082	WH2 domain profile.	WASF2_HUMAN	436-453	2	C:435-452 F:435-452

Asymmetric Unit (8, 16)

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.1	ENSBTAT00000026784	1	ENSBTAE00000293181	chr25:3564711-3564829	119	DNAS1_BOVIN	-	0	0	-	-
1.2	ENSBTAT00000026784	2	ENSBTAE00000218065	chr25:3565156-3565303	148	DNAS1_BOVIN	1-49	49	2	B:1-27 E:1-27	27 27
1.3	ENSBTAT00000026784	3	ENSBTAE00000420413	chr25:3565639-3565727	89	DNAS1_BOVIN	50-79	30	2	B:28-57 E:28-57	30 30
1.4	ENSBTAT00000026784	4	ENSBTAE00000410212	chr25:3565904-3565987	84	DNAS1_BOVIN	79-107	29	2	B:57-85 E:57-85	29 29
1.5	ENSBTAT00000026784	5	ENSBTAE00000218074	chr25:3566232-3566347	116	DNAS1_BOVIN	107-146	40	2	B:85-124 E:85-124	40 40
1.6	ENSBTAT00000026784	6	ENSBTAE00000407443	chr25:3566499-3566611	113	DNAS1_BOVIN	146-183	38	2	B:124-161 E:124-161	38 38
1.7	ENSBTAT00000026784	7	ENSBTAE00000398022	chr25:3566701-3566855	155	DNAS1_BOVIN	184-235	52	2	B:162-213 E:162-213	52 52
1.8	ENSBTAT00000026784	8	ENSBTAE00000425804	chr25:3567129-3567225	97	DNAS1_BOVIN	235-267	33	2	B:213-245 E:213-245	33 33
1.9	ENSBTAT00000026784	9	ENSBTAE00000293180	chr25:3567369-3567733	365	DNAS1_BOVIN	268-282	15	2	B:246-260 E:246-260	15 15

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:362
 aligned with ACTS_RABIT | P68135 from UniProtKB/Swiss-Prot  Length:377

    Alignment length:362
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366  
           ACTS_RABIT     7 TTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAG 368
               SCOP domains --d2a40a1 A:7-146 Actin                                                                                                                       d2a40a2 A:147-366 Actin                                                                                                                                                                                                      SCOP domains
               CATH domains -2a40A01                     2a40A02 A:34-68                    --2a40A01 A:6-33,A:71-134,A:337-366                               -2a40A03 A:136-181,A:271-332                   2a40A04 A:182-267 Actin; Chain A, domain 4                                            ---2a40A03 A:136-181,A:271-332                                   ----2a40A01                        CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeee...eeeeee.......eeee..eeee...eee........eehhhhhhh...eeee..ee..ee.hhhhhhhhhhhhhhh....hhhhh.eeeee....hhhhhhhhhhhhhhh....eeeeeehhhhhhhhh....eeeeee....eeeeeee..ee.hhhheee..hhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh....hhhhhhhhhhhh....eeee.....eeee.hhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhh.eeeehhhhh..hhhhhhhhhhhhhh.......ee...hhhhhhhhhhhhhhhhhhhhhhheehhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------ACTINS_1   ----------------------------------------ACTINS_ACT_LI-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTINS_2 -- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2a40 A   5 TTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEhGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAG 366
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364  
                                                                                               73-HIC

Chain B from PDB  Type:PROTEIN  Length:260
 aligned with DNAS1_BOVIN | P00639 from UniProtKB/Swiss-Prot  Length:282

    Alignment length:260
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282
          DNAS1_BOVIN    23 LKIAAFNIRTFGETKMSNATLASYIVRIVRRYDIVLIQEVRDSHLVAVGKLLDYLNQDDPNTYHYVVSEPLGRNSYKERYLFLFRPNKVSVLDTYQYDDGCESCGNDSFSREPAVVKFSSHSTKVKEFAIVALHSAPSDAVAEINSLYDVYLDVQQKWHLNDVMLMGDFNADCSYVTSSQWSSIRLRTSSTFQWLIPDSADTTATSTNCAYDRIVVAGSLLQSSVVPGSAAPFDFQAAYGLSNEMALAISDHYPVEVTLT 282
               SCOP domains d2a40b_ B: Deoxyribonuclease I                                                                                                                                                                                                                                       SCOP domains
               CATH domains 2a40B00 B:1-260  [code=3.60.10.10, no name defined]                                                                                                                                                                                                                  CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeeehhhhhhhhhhhhhhhhhhh...eeeeeee....hhhhhhhhhhhh.......eeee...........eeeeee.....eeeeeee.......hhhhhh....eeeeee.......eeeeee...hhhhhhhhhhhhhhhhhhhhhhhh...eeeeee........hhhhhhhhhhhhh..eee.................eeeeeehhhhhhhh.....ee.hhhhhh..hhhhhhhhh....eeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------P------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------DNASE_I_1            ----------------DNASE_I_-------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.2  PDB: B:1-27      Exon 1.3  PDB: B:28-57        ---------------------------Exon 1.5  PDB: B:85-124 UniProt: 107-146-------------------------------------Exon 1.7  PDB: B:162-213 UniProt: 184-235           --------------------------------Exon 1.9        Transcript 1 (1)
           Transcript 1 (2) --------------------------------------------------------Exon 1.4  PDB: B:57-85       --------------------------------------Exon 1.6  PDB: B:124-161              ---------------------------------------------------Exon 1.8  PDB: B:213-245         --------------- Transcript 1 (2)
                 2a40 B   1 LKIAAFNIRTFGETKMSNATLASYIVRIVRRYDIVLIQEVRDSHLVAVGKLLDYLNQDDPNTYHYVVSEPLGRNSYKERYLFLFRPNKVSVLDTYQYDDGCESCGNDSFSREPAVVKFSSHSTKVKEFAIVALHSAPSDAVAEINSLYDVYLDVQQKWHLNDVMLMGDFNADCSYVTSSQWSSIRLRTSSTFQWLIPDSADTTATSTNCAYDRIVVAGSLLQSSVVPGSAAPFDFQAAYGLSNEMALAISDHYPVEVTLT 260
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260

Chain C from PDB  Type:PROTEIN  Length:22
 aligned with WASF2_HUMAN | Q9Y6W5 from UniProtKB/Swiss-Prot  Length:498

    Alignment length:22
                                   443       453  
          WASF2_HUMAN   434 SDARSDLLSAIRQGFQLRRVEE 455
               SCOP domains ---------------------- SCOP domains
               CATH domains ---------------------- CATH domains
               Pfam domains ---------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh........ Sec.struct. author
                 SAPs(SNPs) ---------------------- SAPs(SNPs)
                    PROSITE --WH2  PDB: C:435-45-- PROSITE
                 Transcript ---------------------- Transcript
                 2a40 C 433 SDARSDLLSAIRQGFQLRRVEE 454
                                   442       452

Chain D from PDB  Type:PROTEIN  Length:362
 aligned with ACTS_RABIT | P68135 from UniProtKB/Swiss-Prot  Length:377

    Alignment length:362
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366  
           ACTS_RABIT     7 TTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAG 368
               SCOP domains --d2a40d1 D:7-146 Actin                                                                                                                       d2a40d2 D:147-366 Actin                                                                                                                                                                                                      SCOP domains
               CATH domains -2a40D01                     2a40D02 D:34-68                    --2a40D01 D:6-33,D:71-134,D:337-366                               -2a40D03 D:136-181,D:271-332                   2a40D04 D:182-267 Actin; Chain A, domain 4                                            ---2a40D03 D:136-181,D:271-332                                   ----2a40D01                        CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeee...eeeeee.......eeee..eeee...eee........eehhhhhhh...eeee..ee..ee.hhhhhhhhhhhhhhh....hhhhh.eeeee....hhhhhhhhhhhhhhh....eeeeeehhhhhhhhh....eeeeee....eeeeeee..ee.hhhheee..hhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh....hhhhhhhhhhhh....eeee.....eeee.hhhhhhhhhhhhhhhhh....hhhhhhhhhhhh.hhhhhhhhhh.eeeehhhhh..hhhhhhhhhhhhhh.......ee...hhhhhhhhhhhhhhhhhhhhhhheehhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------ACTINS_1   ----------------------------------------ACTINS_ACT_LI-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTINS_2 -- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2a40 D   5 TTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEhGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAG 366
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364  
                                                                                               73-HIC

Chain E from PDB  Type:PROTEIN  Length:260
 aligned with DNAS1_BOVIN | P00639 from UniProtKB/Swiss-Prot  Length:282

    Alignment length:260
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282
          DNAS1_BOVIN    23 LKIAAFNIRTFGETKMSNATLASYIVRIVRRYDIVLIQEVRDSHLVAVGKLLDYLNQDDPNTYHYVVSEPLGRNSYKERYLFLFRPNKVSVLDTYQYDDGCESCGNDSFSREPAVVKFSSHSTKVKEFAIVALHSAPSDAVAEINSLYDVYLDVQQKWHLNDVMLMGDFNADCSYVTSSQWSSIRLRTSSTFQWLIPDSADTTATSTNCAYDRIVVAGSLLQSSVVPGSAAPFDFQAAYGLSNEMALAISDHYPVEVTLT 282
               SCOP domains d2a40e_ E: Deoxyribonuclease I                                                                                                                                                                                                                                       SCOP domains
               CATH domains 2a40E00 E:1-260  [code=3.60.10.10, no name defined]                                                                                                                                                                                                                  CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeeehhhhhhhhhhhhhhhhhhh...eeeeeee....hhhhhhhhhhhh.......eeee...........eeeeee.....eeeeeee......hhhhhh.....eeeeee.......eeeeee...hhhhhhhhhhhhhhhhhhhhhhhh...eeeeee........hhhhhhhhhhhhh..eee.................eeeeeehhhhhhhh.....ee.hhhhhh..hhhhhhhhh....eeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------P------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------DNASE_I_1            ----------------DNASE_I_-------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.2  PDB: E:1-27      Exon 1.3  PDB: E:28-57        ---------------------------Exon 1.5  PDB: E:85-124 UniProt: 107-146-------------------------------------Exon 1.7  PDB: E:162-213 UniProt: 184-235           --------------------------------Exon 1.9        Transcript 1 (1)
           Transcript 1 (2) --------------------------------------------------------Exon 1.4  PDB: E:57-85       --------------------------------------Exon 1.6  PDB: E:124-161              ---------------------------------------------------Exon 1.8  PDB: E:213-245         --------------- Transcript 1 (2)
                 2a40 E   1 LKIAAFNIRTFGETKMSNATLASYIVRIVRRYDIVLIQEVRDSHLVAVGKLLDYLNQDDPNTYHYVVSEPLGRNSYKERYLFLFRPNKVSVLDTYQYDDGCESCGNDSFSREPAVVKFSSHSTKVKEFAIVALHSAPSDAVAEINSLYDVYLDVQQKWHLNDVMLMGDFNADCSYVTSSQWSSIRLRTSSTFQWLIPDSADTTATSTNCAYDRIVVAGSLLQSSVVPGSAAPFDFQAAYGLSNEMALAISDHYPVEVTLT 260
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260

Chain F from PDB  Type:PROTEIN  Length:22
 aligned with WASF2_HUMAN | Q9Y6W5 from UniProtKB/Swiss-Prot  Length:498

    Alignment length:22
                                   443       453  
          WASF2_HUMAN   434 SDARSDLLSAIRQGFQLRRVEE 455
               SCOP domains ---------------------- SCOP domains
               CATH domains ---------------------- CATH domains
               Pfam domains ---------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh........ Sec.struct. author
                 SAPs(SNPs) ---------------------- SAPs(SNPs)
                    PROSITE --WH2  PDB: F:435-45-- PROSITE
                 Transcript ---------------------- Transcript
                 2a40 F 433 SDARSDLLSAIRQGFQLRRVEE 454
                                   442       452

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: Alpha and beta proteins (a+b) (23004)

Fold: DNase I-like (70)

Superfamily: DNase I-like (70)

Family: DNase I-like (31)

Protein domain: Deoxyribonuclease I (11)

Cow (Bos taurus) [TaxId: 9913] (11)

1a	d2a40b_	B:
1b	d2a40e_	E:

Class: Alpha and beta proteins (a/b) (23833)

Fold: Ribonuclease H-like motif (1424)

Superfamily: Actin-like ATPase domain (426)

Family: Actin/HSP70 (199)

Protein domain: Actin (69)

Rabbit (Oryctolagus cuniculus) [TaxId: 9986] (55)

2a	d2a40a1	A:7-146
2b	d2a40a2	A:147-366
2c	d2a40d1	D:7-146
2d	d2a40d2	D:147-366

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: 2-Layer Sandwich (8480)

Topology: Nucleotidyltransferase; domain 5 (788)

Homologous Superfamily: [code=3.30.420.40, no name defined] (217)

Rabbit (Oryctolagus cuniculus) (44)

1a	2a40A01	A:6-33,A:71-134,A:337-366
1b	2a40D01	D:6-33,D:71-134,D:337-366
1c	2a40A03	A:136-181,A:271-332
1d	2a40D03	D:136-181,D:271-332

Architecture: 4-Layer Sandwich (459)

Topology: Deoxyribonuclease I; Chain A (35)

Homologous Superfamily: [code=3.60.10.10, no name defined] (35)

Rabbit (Oryctolagus cuniculus) (7)

2a	2a40B00	B:1-260
2b	2a40E00	E:1-260

Architecture: Alpha-Beta Complex (3881)

Topology: Actin; Chain A, domain 4 (156)

Homologous Superfamily: Actin; Chain A, domain 4 (155)

Rabbit (Oryctolagus cuniculus) (44)

3a	2a40A04	A:182-267
3b	2a40D04	D:182-267

Class: Mainly Beta (13760)

Architecture: Roll (1513)

Topology: Actin; Chain A, domain 2 (36)

Homologous Superfamily: Actin; Chain A, domain 2 (36)

Rabbit (Oryctolagus cuniculus) (17)

4a	2a40A02	A:34-68
4b	2a40D02	D:34-68

(no "Pfam Domain" information available for 2A40)

Asymmetric Unit(hide GO term definitions)

Chain A,D (ACTS_RABIT | P68135)

molecular function
	GO:0005524	ATP binding	Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
	GO:0048306	calcium-dependent protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules), in the presence of calcium.
	GO:0042802	identical protein binding	Interacting selectively and non-covalently with an identical protein or proteins.
	GO:0000166	nucleotide binding	Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
	GO:0090131	mesenchyme migration	The process in which the population of cells that make up a mesenchyme undergo directed movement.
	GO:0010628	positive regulation of gene expression	Any process that increases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA or circRNA (for protein-coding genes) and the translation of that mRNA or circRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form.
	GO:0048741	skeletal muscle fiber development	The process whose specific outcome is the progression of the skeletal muscle fiber over time, from its formation to the mature structure. Muscle fibers are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast.
	GO:0030240	skeletal muscle thin filament assembly	The aggregation, arrangement and bonding together of proteins to form the actin-based thin filaments of myofibrils in skeletal muscle.
cellular component
	GO:0005884	actin filament	A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane.
	GO:0044297	cell body	The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections.
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
	GO:0005856	cytoskeleton	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles.
	GO:0030175	filopodium	Thin, stiff, actin-based protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal or dendritic growth cone, or a dendritic shaft.
	GO:0030027	lamellipodium	A thin sheetlike process extended by the leading edge of a migrating cell or extending cell process; contains a dense meshwork of actin filaments.
	GO:0001725	stress fiber	A contractile actin filament bundle that consists of short actin filaments with alternating polarity, cross-linked by alpha-actinin and possibly other actin bundling proteins, and with myosin present in a periodic distribution along the fiber.
	GO:0005865	striated muscle thin filament	Filaments formed of actin and associated proteins; attached to Z discs at either end of sarcomeres in myofibrils.

Chain B,E (DNAS1_BOVIN | P00639)

molecular function
	GO:0003779	actin binding	Interacting selectively and non-covalently with monomeric or multimeric forms of actin, including actin filaments.
	GO:0004530	deoxyribonuclease I activity	Catalysis of the endonucleolytic cleavage of DNA to 5'-phosphodinucleotide and 5'-phosphooligonucleotide end products.
	GO:0004536	deoxyribonuclease activity	Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acid.
	GO:0004519	endonuclease activity	Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks.
	GO:0016787	hydrolase activity	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
	GO:0004518	nuclease activity	Catalysis of the hydrolysis of ester linkages within nucleic acids.
biological process
	GO:0006308	DNA catabolic process	The cellular DNA metabolic process resulting in the breakdown of DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long unbranched macromolecule formed from one or two strands of linked deoxyribonucleotides, the 3'-phosphate group of each constituent deoxyribonucleotide being joined in 3',5'-phosphodiester linkage to the 5'-hydroxyl group of the deoxyribose moiety of the next one.
	GO:0006915	apoptotic process	A programmed cell death process which begins when a cell receives an internal (e.g. DNA damage) or external signal (e.g. an extracellular death ligand), and proceeds through a series of biochemical events (signaling pathway phase) which trigger an execution phase. The execution phase is the last step of an apoptotic process, and is typically characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies. When the execution phase is completed, the cell has died.
	GO:0090305	nucleic acid phosphodiester bond hydrolysis	The nucleic acid metabolic process in which the phosphodiester bonds between nucleotides are cleaved by hydrolysis.
cellular component
	GO:0005576	extracellular region	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
	GO:0005635	nuclear envelope	The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space).
	GO:0005634	nucleus	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.

Chain C,F (WASF2_HUMAN | Q9Y6W5)

molecular function
	GO:0003779	actin binding	Interacting selectively and non-covalently with monomeric or multimeric forms of actin, including actin filaments.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
	GO:0032403	protein complex binding	Interacting selectively and non-covalently with any protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
	GO:0038096	Fc-gamma receptor signaling pathway involved in phagocytosis	An Fc-gamma receptor signaling pathway that contributes to the endocytic engulfment of external particulate material by phagocytes.
	GO:0016601	Rac protein signal transduction	A series of molecular signals within the cell that are mediated by a member of the Rac family of proteins switching to a GTP-bound active state.
	GO:0030036	actin cytoskeleton organization	A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins.
	GO:0030048	actin filament-based movement	Movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins.
	GO:0007188	adenylate cyclase-modulating G-protein coupled receptor signaling pathway	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, where the pathway proceeds through activation or inhibition of adenylyl cyclase activity and a subsequent change in the concentration of cyclic AMP (cAMP).
	GO:0001667	ameboidal-type cell migration	Cell migration that is accomplished by extension and retraction of a pseudopodium.
	GO:0001525	angiogenesis	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels.
	GO:0006897	endocytosis	A vesicle-mediated transport process in which cells take up external materials or membrane constituents by the invagination of a small region of the plasma membrane to form a new membrane-bounded vesicle.
	GO:0030032	lamellipodium assembly	Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell.
	GO:0072673	lamellipodium morphogenesis	A process that is carried out at the cellular level and in which the structure of a lamellipodium is organized.
	GO:0035855	megakaryocyte development	The process whose specific outcome is the progression of a megakaryocyte cell over time, from its formation to the mature structure. Megakaryocyte development does not include the steps involved in committing a cell to a megakaryocyte fate. A megakaryocyte is a giant cell 50 to 100 micron in diameter, with a greatly lobulated nucleus, found in the bone marrow.
	GO:0051497	negative regulation of stress fiber assembly	Any process that stops, prevents, or reduces the frequency, rate or extent of the assembly a stress fiber, a bundle of microfilaments and other proteins found in fibroblasts.
	GO:0010592	positive regulation of lamellipodium assembly	Any process that increases the rate, frequency or extent of the formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell.
	GO:0048010	vascular endothelial growth factor receptor signaling pathway	Any series of molecular signals initiated by the binding of an extracellular ligand to a vascular endothelial growth factor receptor (VEGFR) located on the surface of the receiving cell, and ending with regulation of a downstream cellular process, e.g. transcription.
	GO:0016032	viral process	A multi-organism process in which a virus is a participant. The other participant is the host. Includes infection of a host cell, replication of the viral genome, and assembly of progeny virus particles. In some cases the viral genetic material may integrate into the host genome and only subsequently, under particular circumstances, 'complete' its life cycle.
cellular component
	GO:0031209	SCAR complex	A pentameric complex that includes orthologues of human PIR121, Nap1, Abi, SCAR, and HSPC300 and regulates actin polymerization and/or depolymerization through small GTPase mediated signal transduction.
	GO:0015629	actin cytoskeleton	The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes.
	GO:0042995	cell projection	A prolongation or process extending from a cell, e.g. a flagellum or axon.
	GO:0005911	cell-cell junction	A cell junction that forms a connection between two or more cells in a multicellular organism; excludes direct cytoplasmic junctions such as ring canals.
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
	GO:0005856	cytoskeleton	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles.
	GO:0005829	cytosol	The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
	GO:0005769	early endosome	A membrane-bounded organelle that receives incoming material from primary endocytic vesicles that have been generated by clathrin-dependent and clathrin-independent endocytosis; vesicles fuse with the early endosome to deliver cargo for sorting into recycling or degradation pathways.
	GO:0070062	extracellular exosome	A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
	GO:0005622	intracellular	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
	GO:0030027	lamellipodium	A thin sheetlike process extended by the leading edge of a migrating cell or extending cell process; contains a dense meshwork of actin filaments.
	GO:0001726	ruffle	Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork.

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	Cis Peptide Bonds
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	2a40
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	ACTS_RABIT \| P68135
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	DNAS1_BOVIN \| P00639
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	3.1.21.1
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2a3z	STRUCTURE OF THE TERNARY COMPLEX OF THE WH2 DOMAIN OF WASP WITH ACTIN-DNASE I
2a41	STRUCTURE OF THE TERNARY COMPLEX OF THE WH2 DOMAIN OF WIP WITH ACTIN-DNASE I
2a42	STRUCTURE OF THE ACTIN-DNASE I COMPLEX

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (6, 16)

Sites (14, 14)

SS Bonds (4, 4)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (1, 2)

PROSITE Motifs (6, 12)

Exons (8, 16)

Sequences/Alignments

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SCOP Domains (2, 6)

CATH Domains (4, 10)

Pfam Domains (0, 0)

Gene Ontology (54, 59)

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Related Entries Specified in the PDB File