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(-) Description

Title :  CRYSTAL STRUCTURE ANALYSIS OF THE ADENYLYL CYCLAES CATALYTIC DOMAIN OF ADENYLYL CYCLASE TOXIN OF BORDETELLA PERTUSSIS IN PRESENCE OF C-TERMINAL CALMODULIN
 
Authors :  Q. Guo, Y. Shen, Y. S. Lee, C. S. Gibbs, M. Mrksich, W. J. Tang
Date :  04 Feb 05  (Deposition) - 17 Jan 06  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.10
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Cyaa, Cam, Layse, Toxin (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  Q. Guo, Y. Shen, Y. S. Lee, C. S. Gibbs, M. Mrksich, W. J. Tang
Structural Basis For The Interaction Of Bordetella Pertussis Adenylyl Cyclase Toxin With Calmodulin.
Embo J. V. 24 3190 2005
PubMed-ID: 16138079  |  Reference-DOI: 10.1038/SJ.EMBOJ.7600800
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - BIFUNCTIONAL HEMOLYSIN-ADENYLATE CYCLASE
    ChainsA
    EC Number4.6.1.1
    EngineeredYES
    Expression SystemESCHERICHIA COLI BL21(DE3)
    Expression System PlasmidPEX
    Expression System StrainBL21(DE3)
    Expression System Taxid469008
    Expression System Vector TypePLASMID
    FragmentCALMODULIN-SENSITIVE ADENYLATE CYCLASE
    GeneCYA, CYAA
    Organism ScientificBORDETELLA PERTUSSIS
    Organism Taxid520
    SynonymCYCLOLYSIN, ACT, AC-HLY
 
Molecule 2 - CALMODULIN
    ChainsB
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPPROEX
    Expression System StrainBL21(DE3)PUBS520
    Expression System Taxid562
    Expression System Vector TypePLASMID
    GeneCALM1, CALM2, CALM3
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymCAM, CALM, CAM1

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

Asymmetric/Biological Unit (1, 2)
No.NameCountTypeFull Name
1CA2Ligand/IonCALCIUM ION

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASP B:129 , ASP B:131 , ASP B:133 , GLN B:135 , GLU B:140 , HOH B:809BINDING SITE FOR RESIDUE CA B 800
2AC2SOFTWAREASP B:93 , ASP B:95 , ASN B:97 , TYR B:99 , GLU B:104BINDING SITE FOR RESIDUE CA B 801

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1YRT)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1YRT)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (14, 14)

Asymmetric/Biological Unit (14, 14)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_073275F90LCALM1_HUMANDisease (LQT14)730882253BF89L
02UniProtVAR_073276D96VCALM2_HUMANDisease (LQT15)730882254BD95V
03UniProtVAR_073277N98ICALM2_HUMANDisease (LQT15)398124647BN97I
04UniProtVAR_078541N98SCALM1_HUMANDisease (CPVT4)398124647BN97S
05UniProtVAR_078543N98SCALM2_HUMANDisease (LQT15)398124647BN97S
06UniProtVAR_078261A103VCALM3_HUMANDisease  ---BA102V
07UniProtVAR_078542D130GCALM1_HUMANDisease (LQT14)730882252BD129G
08UniProtVAR_078544D130GCALM2_HUMANDisease (LQT15)730882252BD129G
09UniProtVAR_078262D130VCALM2_HUMANDisease (LQT15)  ---BD129V
10UniProtVAR_073279D132ECALM2_HUMANDisease (LQT15)398124648BD131E
11UniProtVAR_073280D134HCALM2_HUMANDisease (LQT15)398124650BD133H
12UniProtVAR_073281Q136PCALM2_HUMANDisease (LQT15)398124649BQ135P
13UniProtVAR_078263E141GCALM1_HUMANDisease (LQT14)  ---BE140G
14UniProtVAR_073282F142LCALM1_HUMANDisease (LQT14)11551462BF141L

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (2, 4)

Asymmetric/Biological Unit (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1EF_HAND_2PS50222 EF-hand calcium-binding domain profile.CALM1_HUMAN8-43
44-79
81-116
117-149
  2-
-
B:80-115
B:116-147
CALM2_HUMAN8-43
44-79
81-116
117-149
  2-
-
B:80-115
B:116-147
CALM3_HUMAN8-43
44-79
81-116
117-149
  2-
-
B:80-115
B:116-147
2EF_HAND_1PS00018 EF-hand calcium-binding domain.CALM1_HUMAN21-33
57-69
94-106
130-142
  2-
-
B:93-105
B:129-141
CALM2_HUMAN21-33
57-69
94-106
130-142
  2-
-
B:93-105
B:129-141
CALM3_HUMAN21-33
57-69
94-106
130-142
  2-
-
B:93-105
B:129-141

(-) Exons   (0, 0)

(no "Exon" information available for 1YRT)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:351
 aligned with CYAA_BORP1 | J7QLC0 from UniProtKB/Swiss-Prot  Length:1706

    Alignment length:358
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356        
           CYAA_BORP1     7 AGYANAADRESGIPAAVLDGIKAVAKEKNATLMFRLVNPHSTSLIAEGVATKGLGVHAKSSDWGLQAGYIPVNPNLSKLFGRAPEVIARADNDVNSSLAHGHTAVDLTLSKERLDYLRQAGLVTGMADGVVASNHAGYEQFEFRVKETSDGRYAVQYRRKGGDDFEAVKVIGNAAGIPLTADIDMFAIMPHLSNFRDSARSSVTSGDSVTDYLARTRRAASEATGGLDRERIDLLWKIARAGARSAVGTEARRQFRYDGDMNIGVITDFELEVRNALNRRAHAVGAQDVVQHGTEQNNPFPEADEKIFVVSATGESQMLTRGQLKEYIGQQRGEGYVFYENRAYGVAGKSLFDDGLGA 364
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains Anthrax_toxA-1yrtA01 A:7-184                                                                                                                                                      ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....hhhhhhh..hhhhhhhhhhhhhhh.eeeeee..hhhhhhhhhh..ee...........hhhhh.....hhhhh.....hhhhhhhhhhhhhhhhhh..eeee.eehhhhhhhhhhh....ee....ee..hhhhh.eeeeeee.....eeeeeee......ee.eeee......ee....eeeeee.hhhhhhhhhhhhh...hhhhhhhhhh..-------.hhhhhhhhhhhhhhhhhhhh..hhhhh.eee..eeee..hhhhhhhhhhhhhhhhhh.........hhhhh........eeee.....eeeehhhhhhhhhhhhhhh........................ Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1yrt A   7 AGYANAADRESGIPAAVLDGIKAVAKEKNATLMFRLVNPHSTSLIAEGVATKGLGVHAKSSDWGLQAGYIPVNPNLSKLFGRAPEVIARADNDVNSSLAHGHTAVDLTLSKERLDYLRQAGLVTGMADGVVASNHAGYEQFEFRVKETSDGRYAVQYRRKGGDDFEAVKVIGNAAGIPLTADIDMFAIMPHLSNFRDSARSSVTSGDSVTDYLARTRRA-------LDRERIDLLWKIARAGARSAVGTEARRQFRYDGDMNIGVITDFELEVRNALNRRAHAVGAQDVVQHGTEQNNPFPEADEKIFVVSATGESQMLTRGQLKEYIGQQRGEGYVFYENRAYGVAGKSLFDDGLGA 364
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216        |-      |236       246       256       266       276       286       296       306       316       326       336       346       356        
                                                                                                                                                                                                                                                    225     233                                                                                                                                   

Chain A from PDB  Type:PROTEIN  Length:351
 aligned with CYAA_BORPE | P0DKX7 from UniProtKB/Swiss-Prot  Length:1706

    Alignment length:358
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356        
           CYAA_BORPE     7 AGYANAADRESGIPAAVLDGIKAVAKEKNATLMFRLVNPHSTSLIAEGVATKGLGVHAKSSDWGLQAGYIPVNPNLSKLFGRAPEVIARADNDVNSSLAHGHTAVDLTLSKERLDYLRQAGLVTGMADGVVASNHAGYEQFEFRVKETSDGRYAVQYRRKGGDDFEAVKVIGNAAGIPLTADIDMFAIMPHLSNFRDSARSSVTSGDSVTDYLARTRRAASEATGGLDRERIDLLWKIARAGARSAVGTEARRQFRYDGDMNIGVITDFELEVRNALNRRAHAVGAQDVVQHGTEQNNPFPEADEKIFVVSATGESQMLTRGQLKEYIGQQRGEGYVFYENRAYGVAGKSLFDDGLGA 364
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains Anthrax_toxA-1yrtA01 A:7-184                                                                                                                                                      ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....hhhhhhh..hhhhhhhhhhhhhhh.eeeeee..hhhhhhhhhh..ee...........hhhhh.....hhhhh.....hhhhhhhhhhhhhhhhhh..eeee.eehhhhhhhhhhh....ee....ee..hhhhh.eeeeeee.....eeeeeee......ee.eeee......ee....eeeeee.hhhhhhhhhhhhh...hhhhhhhhhh..-------.hhhhhhhhhhhhhhhhhhhh..hhhhh.eee..eeee..hhhhhhhhhhhhhhhhhh.........hhhhh........eeee.....eeeehhhhhhhhhhhhhhh........................ Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1yrt A   7 AGYANAADRESGIPAAVLDGIKAVAKEKNATLMFRLVNPHSTSLIAEGVATKGLGVHAKSSDWGLQAGYIPVNPNLSKLFGRAPEVIARADNDVNSSLAHGHTAVDLTLSKERLDYLRQAGLVTGMADGVVASNHAGYEQFEFRVKETSDGRYAVQYRRKGGDDFEAVKVIGNAAGIPLTADIDMFAIMPHLSNFRDSARSSVTSGDSVTDYLARTRRA-------LDRERIDLLWKIARAGARSAVGTEARRQFRYDGDMNIGVITDFELEVRNALNRRAHAVGAQDVVQHGTEQNNPFPEADEKIFVVSATGESQMLTRGQLKEYIGQQRGEGYVFYENRAYGVAGKSLFDDGLGA 364
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216        |-      |236       246       256       266       276       286       296       306       316       326       336       346       356        
                                                                                                                                                                                                                                                    225     233                                                                                                                                   

Chain B from PDB  Type:PROTEIN  Length:69
 aligned with CALM1_HUMAN | P0DP23 from UniProtKB/Swiss-Prot  Length:149

    Alignment length:69
                                    89        99       109       119       129       139         
          CALM1_HUMAN    80 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 148
               SCOP domains d1yrtb_ B: Calmodulin                                                 SCOP domains
               CATH domains 1yrtB00 B:79-147 EF-hand                                              CATH domains
               Pfam domains --------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhh.....eehhhhhhhhhhhh....hhhhhhhhhhhhh......eehhhhhhhhhh Sec.struct. author
             SAPs(SNPs) (1) ----------L-----V-I----V--------------------------G-E-H-P----GL------ SAPs(SNPs) (1)
             SAPs(SNPs) (2) ------------------S-------------------------------G------------------ SAPs(SNPs) (2)
             SAPs(SNPs) (3) ------------------S-------------------------------V------------------ SAPs(SNPs) (3)
                PROSITE (2) -EF_HAND_2  PDB: B:80-115            EF_HAND_2  PDB: B:116-147        PROSITE (2)
                PROSITE (3) --------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) --------------------------------------------------------------------- PROSITE (4)
                PROSITE (5) --------------EF_HAND_1    -----------------------EF_HAND_1    ------ PROSITE (5)
                 Transcript --------------------------------------------------------------------- Transcript
                 1yrt B  79 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 147
                                    88        98       108       118       128       138         

Chain B from PDB  Type:PROTEIN  Length:69
 aligned with CALM2_HUMAN | P0DP24 from UniProtKB/Swiss-Prot  Length:149

    Alignment length:69
                                    89        99       109       119       129       139         
          CALM2_HUMAN    80 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 148
               SCOP domains d1yrtb_ B: Calmodulin                                                 SCOP domains
               CATH domains 1yrtB00 B:79-147 EF-hand                                              CATH domains
               Pfam domains --------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhh.....eehhhhhhhhhhhh....hhhhhhhhhhhhh......eehhhhhhhhhh Sec.struct. author
             SAPs(SNPs) (1) ----------L-----V-I----V--------------------------G-E-H-P----GL------ SAPs(SNPs) (1)
             SAPs(SNPs) (2) ------------------S-------------------------------G------------------ SAPs(SNPs) (2)
             SAPs(SNPs) (3) ------------------S-------------------------------V------------------ SAPs(SNPs) (3)
                PROSITE (2) --------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) -EF_HAND_2  PDB: B:80-115            EF_HAND_2  PDB: B:116-147        PROSITE (3)
                PROSITE (4) --------------------------------------------------------------------- PROSITE (4)
                PROSITE (5) --------------------------------------------------------------------- PROSITE (5)
                PROSITE (6) --------------EF_HAND_1    -----------------------EF_HAND_1    ------ PROSITE (6)
                 Transcript --------------------------------------------------------------------- Transcript
                 1yrt B  79 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 147
                                    88        98       108       118       128       138         

Chain B from PDB  Type:PROTEIN  Length:69
 aligned with CALM3_HUMAN | P0DP25 from UniProtKB/Swiss-Prot  Length:149

    Alignment length:69
                                    89        99       109       119       129       139         
          CALM3_HUMAN    80 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 148
               SCOP domains d1yrtb_ B: Calmodulin                                                 SCOP domains
               CATH domains 1yrtB00 B:79-147 EF-hand                                              CATH domains
               Pfam domains --------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhh.....eehhhhhhhhhhhh....hhhhhhhhhhhhh......eehhhhhhhhhh Sec.struct. author
             SAPs(SNPs) (1) ----------L-----V-I----V--------------------------G-E-H-P----GL------ SAPs(SNPs) (1)
             SAPs(SNPs) (2) ------------------S-------------------------------G------------------ SAPs(SNPs) (2)
             SAPs(SNPs) (3) ------------------S-------------------------------V------------------ SAPs(SNPs) (3)
                PROSITE (1) -EF_HAND_2  PDB: B:80-115            EF_HAND_2  PDB: B:116-147        PROSITE (1)
                PROSITE (2) --------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) --------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) --------------EF_HAND_1    -----------------------EF_HAND_1    ------ PROSITE (4)
                 Transcript --------------------------------------------------------------------- Transcript
                 1yrt B  79 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 147
                                    88        98       108       118       128       138         

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit

(-) CATH Domains  (1, 1)

Asymmetric/Biological Unit

(-) Pfam Domains  (1, 1)

Asymmetric/Biological Unit

(-) Gene Ontology  (93, 107)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A   (CYAA_BORPE | P0DKX7)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0004016    adenylate cyclase activity    Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate.
    GO:0005509    calcium ion binding    Interacting selectively and non-covalently with calcium ions (Ca2+).
    GO:0008294    calcium- and calmodulin-responsive adenylate cyclase activity    Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate, stimulated by calcium-bound calmodulin.
    GO:0005516    calmodulin binding    Interacting selectively and non-covalently with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states.
    GO:0016829    lyase activity    Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
biological process
    GO:0006171    cAMP biosynthetic process    The chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate).
    GO:0019835    cytolysis    The rupture of cell membranes and the loss of cytoplasm.
    GO:0044179    hemolysis in other organism    The cytolytic destruction of red blood cells, with the release of intracellular hemoglobin, in one organism by another.
    GO:0009405    pathogenesis    The set of specific processes that generate the ability of an organism to induce an abnormal, generally detrimental state in another organism.
    GO:0007204    positive regulation of cytosolic calcium ion concentration    Any process that increases the concentration of calcium ions in the cytosol.
cellular component
    GO:0005623    cell    The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope.
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.

Chain A   (CYAA_BORP1 | J7QLC0)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0004016    adenylate cyclase activity    Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate.
    GO:0005509    calcium ion binding    Interacting selectively and non-covalently with calcium ions (Ca2+).
    GO:0008294    calcium- and calmodulin-responsive adenylate cyclase activity    Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate, stimulated by calcium-bound calmodulin.
    GO:0005516    calmodulin binding    Interacting selectively and non-covalently with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states.
    GO:0016829    lyase activity    Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
biological process
    GO:0006171    cAMP biosynthetic process    The chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate).
    GO:0019835    cytolysis    The rupture of cell membranes and the loss of cytoplasm.
    GO:0044179    hemolysis in other organism    The cytolytic destruction of red blood cells, with the release of intracellular hemoglobin, in one organism by another.
    GO:0009405    pathogenesis    The set of specific processes that generate the ability of an organism to induce an abnormal, generally detrimental state in another organism.
cellular component
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.

Chain B   (CALM2_HUMAN | P0DP24)

Chain B   (CALM1_HUMAN | P0DP23)

Chain B   (CALM3_HUMAN | P0DP25)

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  CALM1_HUMAN | P0DP23
    Protein Disorder PredictionDisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  CALM2_HUMAN | P0DP24
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  CALM3_HUMAN | P0DP25
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  CYAA_BORP1 | J7QLC0
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CALM1_HUMAN | P0DP231aji 1cdl 1cll 1cm1 1cm4 1ctr 1deg 1iwq 1j7o 1j7p 1k90 1k93 1l7z 1lvc 1nkf 1pk0 1qiv 1qiw 1s26 1sk6 1sw8 1up5 1wrz 1xfu 1xfv 1xfw 1xfx 1xfy 1xfz 1y6w 1yr5 1yru 1zot 1zuz 2be6 2f3y 2f3z 2hf5 2i08 2jzi 2k0e 2k0f 2k0j 2k61 2kne 2kug 2kuh 2l53 2l7l 2lgf 2ll6 2ll7 2lqc 2lqp 2lv6 2m0j 2m0k 2m55 2mg5 2n27 2n6a 2n77 2n8j 2r28 2v01 2v02 2vay 2w73 2wel 2x0g 2y4v 3bya 3cln 3dve 3dvj 3dvk 3dvm 3evv 3ewt 3ewv 3g43 3hr4 3j41 3o77 3o78 3oxq 3sui 3uct 3ucw 3ucy 4bw7 4bw8 4byf 4dck 4djc 4gow 4jpz 4jq0 4l79 4lzx 4m1l 4ovn 4q57 4q5u 4umo 4upu 4v0c 5coc 5dbr 5dow 5dsu 5ggm 5i0i 5j03 5j8h 5k7l 5k8q 5vms 5wsu 5wsv
        CALM2_HUMAN | P0DP241aji 1cdl 1cll 1cm1 1cm4 1ctr 1deg 1iwq 1j7o 1j7p 1k90 1k93 1l7z 1lvc 1nkf 1pk0 1qiv 1qiw 1s26 1sk6 1sw8 1up5 1xfu 1xfv 1xfw 1xfx 1xfy 1xfz 1y6w 1yr5 1yru 1zot 1zuz 2be6 2f3y 2f3z 2hf5 2jzi 2k0e 2k0f 2k0j 2k61 2kne 2kug 2kuh 2l53 2lgf 2ll6 2ll7 2lqc 2lqp 2lv6 2m0j 2m0k 2m55 2mg5 2n27 2n6a 2n77 2n8j 2r28 2v01 2v02 2vay 2w73 2wel 2x0g 2y4v 3bya 3cln 3dve 3dvj 3dvk 3dvm 3ewt 3ewv 3g43 3hr4 3j41 3oxq 3sui 3uct 3ucw 3ucy 4bw7 4bw8 4byf 4dck 4djc 4gow 4jpz 4jq0 4l79 4lzx 4m1l 4ovn 4q57 4q5u 4umo 4upu 4v0c 5coc 5dbr 5dow 5dsu 5ggm 5i0i 5j03 5j8h 5k7l 5k8q 5vms 5wsu 5wsv
        CALM3_HUMAN | P0DP251aji 1cdl 1cll 1cm1 1cm4 1ctr 1deg 1iwq 1j7o 1j7p 1k90 1k93 1l7z 1lvc 1nkf 1pk0 1qiv 1qiw 1s26 1sk6 1sw8 1up5 1xfu 1xfv 1xfw 1xfx 1xfy 1xfz 1y6w 1yr5 1yru 1zot 1zuz 2be6 2f3y 2f3z 2hf5 2jzi 2k0e 2k0f 2k0j 2k61 2kne 2kug 2kuh 2l53 2lgf 2ll6 2ll7 2lqc 2lqp 2lv6 2m0j 2m0k 2m55 2mg5 2n27 2n6a 2n77 2n8j 2r28 2v01 2v02 2vay 2w73 2wel 2x0g 2y4v 3bya 3cln 3dve 3dvj 3dvk 3dvm 3ewt 3ewv 3g43 3hr4 3j41 3oxq 3sui 3uct 3ucw 3ucy 4bw7 4bw8 4byf 4dck 4djc 4gow 4jpz 4jq0 4l79 4lzx 4m1l 4ovn 4q57 4q5u 4umo 4upu 4v0c 5coc 5dbr 5dow 5dsu 5ggm 5i0i 5j03 5j8h 5k7l 5k8q 5vms 5wsu 5wsv
        CYAA_BORP1 | J7QLC01yru 1zot 2col 5cvw
        CYAA_BORPE | P0DKX71yru 1zot 2col 5cxl

(-) Related Entries Specified in the PDB File

1yru