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Asym./Biol. Unit - manually (Jmol Viewer)

Asym./Biol. Unit (Jmol Viewer)

Asym./Biol. Unit - sites (Jmol Viewer)

Title :   CRYSTAL STRUCTURE ANALYSIS OF THE ADENYLYL CYCLAES CATALYTIC DOMAIN OF ADENYLYL CYCLASE TOXIN OF BORDETELLA PERTUSSIS IN PRESENCE OF C-TERMINAL CALMODULIN

Authors :   Q. Guo, Y. Shen, Y. S. Lee, C. S. Gibbs, M. Mrksich, W. J. Tang

Date :   04 Feb 05 (Deposition) - 17 Jan 06 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.10

Chains :   Asym./Biol. Unit : A,B

Keywords :   Cyaa, Cam, Layse, Toxin (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   Q. Guo, Y. Shen, Y. S. Lee, C. S. Gibbs, M. Mrksich, W. J. Tang
Structural Basis For The Interaction Of Bordetella Pertussis Adenylyl Cyclase Toxin With Calmodulin.
Embo J. V. 24 3190 2005
PubMed-ID: 16138079 | Reference-DOI: 10.1038/SJ.EMBOJ.7600800
(for further references see the PDB file header)

Molecule 1 - BIFUNCTIONAL HEMOLYSIN-ADENYLATE CYCLASE
	Chains	:	A
	EC Number	:	4.6.1.1
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI BL21(DE3)
	Expression System Plasmid	:	PEX
	Expression System Strain	:	BL21(DE3)
	Expression System Taxid	:	469008
	Expression System Vector Type	:	PLASMID
	Fragment	:	CALMODULIN-SENSITIVE ADENYLATE CYCLASE
	Gene	:	CYA, CYAA
	Organism Scientific	:	BORDETELLA PERTUSSIS
	Organism Taxid	:	520
	Synonym	:	CYCLOLYSIN, ACT, AC-HLY

Molecule 2 - CALMODULIN
	Chains	:	B
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PPROEX
	Expression System Strain	:	BL21(DE3)PUBS520
	Expression System Taxid	:	562
	Expression System Vector Type	:	PLASMID
	Gene	:	CALM1, CALM2, CALM3
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606
	Synonym	:	CAM, CALM, CAM1

		1	2
Asymmetric/Biological Unit	:	A	B

Summary Information (see also Sequences/Alignments below)

Asymmetric/Biological Unit (1, 2)

No.	Name	Count	Type	Full Name
1	CA	2	Ligand/Ion	CALCIUM ION

Asymmetric Unit (2, 2)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	ASP B:129 , ASP B:131 , ASP B:133 , GLN B:135 , GLU B:140 , HOH B:809	BINDING SITE FOR RESIDUE CA B 800
2	AC2	SOFTWARE	ASP B:93 , ASP B:95 , ASN B:97 , TYR B:99 , GLU B:104	BINDING SITE FOR RESIDUE CA B 801

(no "SS Bond" information available for 1YRT)

(no "Cis Peptide Bond" information available for 1YRT)

Asymmetric/Biological Unit (14, 14)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
01	UniProt	VAR_073275	F	90	L	CALM1_HUMAN	Disease (LQT14)	730882253	B	F	89	L
02	UniProt	VAR_073276	D	96	V	CALM2_HUMAN	Disease (LQT15)	730882254	B	D	95	V
03	UniProt	VAR_073277	N	98	I	CALM2_HUMAN	Disease (LQT15)	398124647	B	N	97	I
04	UniProt	VAR_078541	N	98	S	CALM1_HUMAN	Disease (CPVT4)	398124647	B	N	97	S
05	UniProt	VAR_078543	N	98	S	CALM2_HUMAN	Disease (LQT15)	398124647	B	N	97	S
06	UniProt	VAR_078261	A	103	V	CALM3_HUMAN	Disease	---	B	A	102	V
07	UniProt	VAR_078542	D	130	G	CALM1_HUMAN	Disease (LQT14)	730882252	B	D	129	G
08	UniProt	VAR_078544	D	130	G	CALM2_HUMAN	Disease (LQT15)	730882252	B	D	129	G
09	UniProt	VAR_078262	D	130	V	CALM2_HUMAN	Disease (LQT15)	---	B	D	129	V
10	UniProt	VAR_073279	D	132	E	CALM2_HUMAN	Disease (LQT15)	398124648	B	D	131	E
11	UniProt	VAR_073280	D	134	H	CALM2_HUMAN	Disease (LQT15)	398124650	B	D	133	H
12	UniProt	VAR_073281	Q	136	P	CALM2_HUMAN	Disease (LQT15)	398124649	B	Q	135	P
13	UniProt	VAR_078263	E	141	G	CALM1_HUMAN	Disease (LQT14)	---	B	E	140	G
14	UniProt	VAR_073282	F	142	L	CALM1_HUMAN	Disease (LQT14)	11551462	B	F	141	L

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Asymmetric/Biological Unit (2, 4)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	EF_HAND_2	PS50222	EF-hand calcium-binding domain profile.	CALM1_HUMAN	8-43 44-79 81-116 117-149	2	- - B:80-115 B:116-147
				CALM2_HUMAN	8-43 44-79 81-116 117-149	2	- - B:80-115 B:116-147
				CALM3_HUMAN	8-43 44-79 81-116 117-149	2	- - B:80-115 B:116-147
2	EF_HAND_1	PS00018	EF-hand calcium-binding domain.	CALM1_HUMAN	21-33 57-69 94-106 130-142	2	- - B:93-105 B:129-141
				CALM2_HUMAN	21-33 57-69 94-106 130-142	2	- - B:93-105 B:129-141
				CALM3_HUMAN	21-33 57-69 94-106 130-142	2	- - B:93-105 B:129-141

(no "Exon" information available for 1YRT)

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:351
 aligned with CYAA_BORP1 | J7QLC0 from UniProtKB/Swiss-Prot  Length:1706

    Alignment length:358
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356        
           CYAA_BORP1     7 AGYANAADRESGIPAAVLDGIKAVAKEKNATLMFRLVNPHSTSLIAEGVATKGLGVHAKSSDWGLQAGYIPVNPNLSKLFGRAPEVIARADNDVNSSLAHGHTAVDLTLSKERLDYLRQAGLVTGMADGVVASNHAGYEQFEFRVKETSDGRYAVQYRRKGGDDFEAVKVIGNAAGIPLTADIDMFAIMPHLSNFRDSARSSVTSGDSVTDYLARTRRAASEATGGLDRERIDLLWKIARAGARSAVGTEARRQFRYDGDMNIGVITDFELEVRNALNRRAHAVGAQDVVQHGTEQNNPFPEADEKIFVVSATGESQMLTRGQLKEYIGQQRGEGYVFYENRAYGVAGKSLFDDGLGA 364
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains Anthrax_toxA-1yrtA01 A:7-184                                                                                                                                                      ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....hhhhhhh..hhhhhhhhhhhhhhh.eeeeee..hhhhhhhhhh..ee...........hhhhh.....hhhhh.....hhhhhhhhhhhhhhhhhh..eeee.eehhhhhhhhhhh....ee....ee..hhhhh.eeeeeee.....eeeeeee......ee.eeee......ee....eeeeee.hhhhhhhhhhhhh...hhhhhhhhhh..-------.hhhhhhhhhhhhhhhhhhhh..hhhhh.eee..eeee..hhhhhhhhhhhhhhhhhh.........hhhhh........eeee.....eeeehhhhhhhhhhhhhhh........................ Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1yrt A   7 AGYANAADRESGIPAAVLDGIKAVAKEKNATLMFRLVNPHSTSLIAEGVATKGLGVHAKSSDWGLQAGYIPVNPNLSKLFGRAPEVIARADNDVNSSLAHGHTAVDLTLSKERLDYLRQAGLVTGMADGVVASNHAGYEQFEFRVKETSDGRYAVQYRRKGGDDFEAVKVIGNAAGIPLTADIDMFAIMPHLSNFRDSARSSVTSGDSVTDYLARTRRA-------LDRERIDLLWKIARAGARSAVGTEARRQFRYDGDMNIGVITDFELEVRNALNRRAHAVGAQDVVQHGTEQNNPFPEADEKIFVVSATGESQMLTRGQLKEYIGQQRGEGYVFYENRAYGVAGKSLFDDGLGA 364
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216        |-      |236       246       256       266       276       286       296       306       316       326       336       346       356        
                                                                                                                                                                                                                                                    225     233

Chain A from PDB  Type:PROTEIN  Length:351
 aligned with CYAA_BORPE | P0DKX7 from UniProtKB/Swiss-Prot  Length:1706

    Alignment length:358
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356        
           CYAA_BORPE     7 AGYANAADRESGIPAAVLDGIKAVAKEKNATLMFRLVNPHSTSLIAEGVATKGLGVHAKSSDWGLQAGYIPVNPNLSKLFGRAPEVIARADNDVNSSLAHGHTAVDLTLSKERLDYLRQAGLVTGMADGVVASNHAGYEQFEFRVKETSDGRYAVQYRRKGGDDFEAVKVIGNAAGIPLTADIDMFAIMPHLSNFRDSARSSVTSGDSVTDYLARTRRAASEATGGLDRERIDLLWKIARAGARSAVGTEARRQFRYDGDMNIGVITDFELEVRNALNRRAHAVGAQDVVQHGTEQNNPFPEADEKIFVVSATGESQMLTRGQLKEYIGQQRGEGYVFYENRAYGVAGKSLFDDGLGA 364
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains Anthrax_toxA-1yrtA01 A:7-184                                                                                                                                                      ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....hhhhhhh..hhhhhhhhhhhhhhh.eeeeee..hhhhhhhhhh..ee...........hhhhh.....hhhhh.....hhhhhhhhhhhhhhhhhh..eeee.eehhhhhhhhhhh....ee....ee..hhhhh.eeeeeee.....eeeeeee......ee.eeee......ee....eeeeee.hhhhhhhhhhhhh...hhhhhhhhhh..-------.hhhhhhhhhhhhhhhhhhhh..hhhhh.eee..eeee..hhhhhhhhhhhhhhhhhh.........hhhhh........eeee.....eeeehhhhhhhhhhhhhhh........................ Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1yrt A   7 AGYANAADRESGIPAAVLDGIKAVAKEKNATLMFRLVNPHSTSLIAEGVATKGLGVHAKSSDWGLQAGYIPVNPNLSKLFGRAPEVIARADNDVNSSLAHGHTAVDLTLSKERLDYLRQAGLVTGMADGVVASNHAGYEQFEFRVKETSDGRYAVQYRRKGGDDFEAVKVIGNAAGIPLTADIDMFAIMPHLSNFRDSARSSVTSGDSVTDYLARTRRA-------LDRERIDLLWKIARAGARSAVGTEARRQFRYDGDMNIGVITDFELEVRNALNRRAHAVGAQDVVQHGTEQNNPFPEADEKIFVVSATGESQMLTRGQLKEYIGQQRGEGYVFYENRAYGVAGKSLFDDGLGA 364
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216        |-      |236       246       256       266       276       286       296       306       316       326       336       346       356        
                                                                                                                                                                                                                                                    225     233

Chain B from PDB  Type:PROTEIN  Length:69
 aligned with CALM1_HUMAN | P0DP23 from UniProtKB/Swiss-Prot  Length:149

    Alignment length:69
                                    89        99       109       119       129       139         
          CALM1_HUMAN    80 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 148
               SCOP domains d1yrtb_ B: Calmodulin                                                 SCOP domains
               CATH domains 1yrtB00 B:79-147 EF-hand                                              CATH domains
               Pfam domains --------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhh.....eehhhhhhhhhhhh....hhhhhhhhhhhhh......eehhhhhhhhhh Sec.struct. author
             SAPs(SNPs) (1) ----------L-----V-I----V--------------------------G-E-H-P----GL------ SAPs(SNPs) (1)
             SAPs(SNPs) (2) ------------------S-------------------------------G------------------ SAPs(SNPs) (2)
             SAPs(SNPs) (3) ------------------S-------------------------------V------------------ SAPs(SNPs) (3)
                PROSITE (2) -EF_HAND_2  PDB: B:80-115            EF_HAND_2  PDB: B:116-147        PROSITE (2)
                PROSITE (3) --------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) --------------------------------------------------------------------- PROSITE (4)
                PROSITE (5) --------------EF_HAND_1    -----------------------EF_HAND_1    ------ PROSITE (5)
                 Transcript --------------------------------------------------------------------- Transcript
                 1yrt B  79 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 147
                                    88        98       108       118       128       138

Chain B from PDB  Type:PROTEIN  Length:69
 aligned with CALM2_HUMAN | P0DP24 from UniProtKB/Swiss-Prot  Length:149

    Alignment length:69
                                    89        99       109       119       129       139         
          CALM2_HUMAN    80 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 148
               SCOP domains d1yrtb_ B: Calmodulin                                                 SCOP domains
               CATH domains 1yrtB00 B:79-147 EF-hand                                              CATH domains
               Pfam domains --------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhh.....eehhhhhhhhhhhh....hhhhhhhhhhhhh......eehhhhhhhhhh Sec.struct. author
             SAPs(SNPs) (1) ----------L-----V-I----V--------------------------G-E-H-P----GL------ SAPs(SNPs) (1)
             SAPs(SNPs) (2) ------------------S-------------------------------G------------------ SAPs(SNPs) (2)
             SAPs(SNPs) (3) ------------------S-------------------------------V------------------ SAPs(SNPs) (3)
                PROSITE (2) --------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) -EF_HAND_2  PDB: B:80-115            EF_HAND_2  PDB: B:116-147        PROSITE (3)
                PROSITE (4) --------------------------------------------------------------------- PROSITE (4)
                PROSITE (5) --------------------------------------------------------------------- PROSITE (5)
                PROSITE (6) --------------EF_HAND_1    -----------------------EF_HAND_1    ------ PROSITE (6)
                 Transcript --------------------------------------------------------------------- Transcript
                 1yrt B  79 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 147
                                    88        98       108       118       128       138

Chain B from PDB  Type:PROTEIN  Length:69
 aligned with CALM3_HUMAN | P0DP25 from UniProtKB/Swiss-Prot  Length:149

    Alignment length:69
                                    89        99       109       119       129       139         
          CALM3_HUMAN    80 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 148
               SCOP domains d1yrtb_ B: Calmodulin                                                 SCOP domains
               CATH domains 1yrtB00 B:79-147 EF-hand                                              CATH domains
               Pfam domains --------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhh.....eehhhhhhhhhhhh....hhhhhhhhhhhhh......eehhhhhhhhhh Sec.struct. author
             SAPs(SNPs) (1) ----------L-----V-I----V--------------------------G-E-H-P----GL------ SAPs(SNPs) (1)
             SAPs(SNPs) (2) ------------------S-------------------------------G------------------ SAPs(SNPs) (2)
             SAPs(SNPs) (3) ------------------S-------------------------------V------------------ SAPs(SNPs) (3)
                PROSITE (1) -EF_HAND_2  PDB: B:80-115            EF_HAND_2  PDB: B:116-147        PROSITE (1)
                PROSITE (2) --------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) --------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) --------------EF_HAND_1    -----------------------EF_HAND_1    ------ PROSITE (4)
                 Transcript --------------------------------------------------------------------- Transcript
                 1yrt B  79 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 147
                                    88        98       108       118       128       138

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric/Biological Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: All alpha proteins (14657)

Fold: EF Hand-like (739)

Superfamily: EF-hand (657)

Family: Calmodulin-like (356)

Protein domain: Calmodulin (152)

Human (Homo sapiens) [TaxId: 9606] (74)

d1yrtb_

Asymmetric/Biological Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Mainly Alpha (13335)

Architecture: Orthogonal Bundle (10391)

Topology: Recoverin; domain 1 (474)

Homologous Superfamily: EF-hand (412)

Bordetella pertussis. Organism_taxid: 520. (2)

1yrtB00

B:79-147

Asymmetric/Biological Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: no clan defined [family: Anthrax_toxA] (16)

Family: Anthrax_toxA (16)

Bordetella pertussis (3)

Anthrax_toxA-1yrtA01

A:7-184

Asymmetric/Biological Unit(hide GO term definitions)

Chain A (CYAA_BORPE | P0DKX7)

molecular function
	GO:0005524	ATP binding	Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
	GO:0004016	adenylate cyclase activity	Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate.
	GO:0005509	calcium ion binding	Interacting selectively and non-covalently with calcium ions (Ca2+).
	GO:0008294	calcium- and calmodulin-responsive adenylate cyclase activity	Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate, stimulated by calcium-bound calmodulin.
	GO:0005516	calmodulin binding	Interacting selectively and non-covalently with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states.
	GO:0016829	lyase activity	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.
	GO:0000166	nucleotide binding	Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
biological process
	GO:0006171	cAMP biosynthetic process	The chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate).
	GO:0019835	cytolysis	The rupture of cell membranes and the loss of cytoplasm.
	GO:0044179	hemolysis in other organism	The cytolytic destruction of red blood cells, with the release of intracellular hemoglobin, in one organism by another.
	GO:0009405	pathogenesis	The set of specific processes that generate the ability of an organism to induce an abnormal, generally detrimental state in another organism.
	GO:0007204	positive regulation of cytosolic calcium ion concentration	Any process that increases the concentration of calcium ions in the cytosol.
cellular component
	GO:0005623	cell	The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope.
	GO:0005576	extracellular region	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.

Chain A (CYAA_BORP1 | J7QLC0)

molecular function
	GO:0005524	ATP binding	Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
	GO:0004016	adenylate cyclase activity	Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate.
	GO:0005509	calcium ion binding	Interacting selectively and non-covalently with calcium ions (Ca2+).
	GO:0008294	calcium- and calmodulin-responsive adenylate cyclase activity	Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate, stimulated by calcium-bound calmodulin.
	GO:0005516	calmodulin binding	Interacting selectively and non-covalently with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states.
	GO:0016829	lyase activity	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.
	GO:0000166	nucleotide binding	Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
biological process
	GO:0006171	cAMP biosynthetic process	The chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate).
	GO:0019835	cytolysis	The rupture of cell membranes and the loss of cytoplasm.
	GO:0044179	hemolysis in other organism	The cytolytic destruction of red blood cells, with the release of intracellular hemoglobin, in one organism by another.
	GO:0009405	pathogenesis	The set of specific processes that generate the ability of an organism to induce an abnormal, generally detrimental state in another organism.
cellular component
	GO:0005576	extracellular region	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.

Chain B (CALM2_HUMAN | P0DP24)

Chain B (CALM1_HUMAN | P0DP23)

Chain B (CALM3_HUMAN | P0DP25)

Asymmetric/Biological Unit
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	Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 1yrt)

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Access by PDB/NDB ID
	1yrt
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		Sequence, Family and Domain Information	:	InterPro \| Pfam \| SMART \| UniProtKB/SwissProt
	CYAA_BORPE \| P0DKX7
		Comparative Protein Structure Models	:	ModBase
		Genomic Information	:	Ensembl
		Protein-protein Interaction	:	DIP
		Sequence, Family and Domain Information	:	InterPro \| Pfam \| SMART \| UniProtKB/SwissProt

Access by Enzyme Classificator (EC Number)
	4.6.1.1
		General Enzyme Information	:	BRENDA \| EC-PDB \| Enzyme \| IntEnz
		Pathway	:	KEGG \| MetaCyc

Access by Disease Identifier (MIM ID)
	614916
		Disease Information	:	OMIM
	616247
		Disease Information	:	OMIM
	616249
		Disease Information	:	OMIM

Access by GenAge ID
	(no 'GenAge ID' available)
		Age Related Information	:	GenAge

Access by PDB/NDB ID
		Domain Information	:	XDom
		Interatomic Contacts of Structural Units	:	CSU
		Ligand-protein Contacts	:	LPC
		Protein Cavities	:	castP
		Sequence and Secondary Structure	:	PDBCartoon
		Structure Alignment	:	STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
		Structure and Sequence Browser	:	STING

Access by UniProt ID/Accession number
	CALM1_HUMAN \| P0DP23
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)
	CALM2_HUMAN \| P0DP24
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)
	CALM3_HUMAN \| P0DP25
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)
	CYAA_BORP1 \| J7QLC0
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)
	CYAA_BORPE \| P0DKX7
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (1, 2)

Sites (2, 2)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (14, 14)

PROSITE Motifs (2, 4)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (1, 1)

CATH Domains (1, 1)

Pfam Domains (1, 1)

Gene Ontology (93, 107)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File