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Class: Low resolution protein structures (283)
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Fold: anthrax toxin protective antigen-receptor complex (1)
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Superfamily: anthrax toxin protective antigen-receptor complex (1)
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Family: anthrax toxin protective antigen-receptor complex (1)
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Protein domain: anthrax toxin protective antigen-receptor complex (1)
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interspecies complex: Bacillus anthracis and Homo sapiens (1)
1TZNA:; B:; K:; L:; M:; O:; C:; D:; E:; F:; G:; H:; I:; J:CRYSTAL STRUCTURE OF THE ANTHRAX TOXIN PROTECTIVE ANTIGEN HEPTAMERIC PREPORE BOUND TO THE VWA DOMAIN OF CMG2, AN ANTHRAX TOXIN RECEPTOR
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Fold: ATP synthase (3)
(-)
Superfamily: ATP synthase (3)
(-)
Family: ATP synthase (3)
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Protein domain: ATP synthase (3)
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Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (1)
1QO1A:; B:; M:; N:; O:; P:; Q:; R:; S:; T:; C:; D:; E:; F:; G:; J:; K:; L:MOLECULAR ARCHITECTURE OF THE ROTARY MOTOR IN ATP SYNTHASE FROM YEAST MITOCHONDRIA
(-)
Escherichia coli [TaxId: 562] (2)
1D8SA:; C:; D:; E:; F:; G:; B:ESCHERICHIA COLI F1 ATPASE
1JNVA:; B:; C:; D:; E:; F:; Y:; Z:THE CONFORMATION OF THE EPSILON AND GAMMA SUBUNITS WITHIN THE E. COLI F1 ATPASE
(-)
Fold: Bacteriophage HK97 procapsid (prohead II) (1)
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Superfamily: Bacteriophage HK97 procapsid (prohead II) (1)
(-)
Family: Bacteriophage HK97 procapsid (prohead II) (1)
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Protein domain: Bacteriophage HK97 procapsid (prohead II) (1)
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Bacteriophage HK97 [TaxId: 37554] (1)
1IF0A:; B:; C:; D:; E:; F:; G:PSEUDO-ATOMIC MODEL OF BACTERIOPHAGE HK97 PROCAPSID (PROHEAD II)
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Fold: Bacteriophage T4 3D cryo-EM reconstruction (7)
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Superfamily: Bacteriophage T4 3D cryo-EM reconstruction (7)
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Family: Bacteriophage T4 3D cryo-EM reconstruction (7)
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Protein domain: Bacteriophage T4 3D cryo-EM reconstruction (7)
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Bacteriophage T4 [TaxId: 10665] (7)
1PDFA:; B:; K:; L:; M:; N:; O:; P:; Q:; R:; C:; D:; E:; F:; G:; H:; I:; J:FITTING OF GP11 CRYSTAL STRUCTURE INTO 3D CRYO-EM RECONSTRUCTION OF BACTERIOPHAGE T4 BASEPLATE-TAIL TUBE COMPLEX
1PDIA:; B:; C:; D:; E:; F:; G:; H:; I:; J:; K:; L:; M:; N:; O:; P:; Q:; R:FITTING OF THE C-TERMINAL PART OF THE SHORT TAIL FIBERS INTO THE CRYO-EM RECONSTRUCTION OF T4 BASEPLATE
1PDJD:; E:; F:FITTING OF GP27 INTO CRYOEM RECONSTRUCTION OF BACTERIOPHAGE T4 BASEPLATE
1PDLA:; B:; C:FITTING OF GP5 IN THE CRYOEM RECONSTRUCTION OF THE BACTERIOPHAGE T4 BASEPLATE
1PDMA:; B:; C:; D:; E:; F:; G:; H:; I:; J:; K:; L:FITTING OF GP8 STRUCTURE INTO THE CRYOEM RECONSTRUCTION OF THE BACTERIOPHAGE T4 BASEPLATE
1PDPA:; B:; C:; D:; E:; F:; G:; H:; I:; J:; K:; L:; M:; N:; O:; P:; Q:; R:FITTING OF GP9 STRUCTURE INTO THE BACTERIOPHAGE T4 BASEPLATE CRYOEM RECONSTRUCTION
1TJAA:; B:; C:; D:; E:; F:; G:; H:FITTING OF GP8, GP9, AND GP11 INTO THE CRYO-EM RECONSTRUCTION OF THE BACTERIOPHAGE T4 CONTRACTED TAIL
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Fold: Blood clotting (2)
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Superfamily: Blood clotting (2)
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Family: Blood clotting (2)
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Protein domain: Fibrinogen (2)
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Chicken (Gallus gallus) [TaxId: 9031] (1)
1EI3A:; B:; C:; D:; E:; F:CRYSTAL STRUCTURE OF NATIVE CHICKEN FIBRINOGEN
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Cow (Bos taurus) [TaxId: 9913] (1)
1DEQA:; B:; Q:; R:; S:; Z:; C:; D:; E:; F:; M:; N:; O:; P:THE CRYSTAL STRUCTURE OF MODIFIED BOVINE FIBRINOGEN (AT ~4 ANGSTROM RESOLUTION)
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Fold: clathrin assemblies (3)
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Superfamily: clathrin assemblies (3)
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Family: clathrin assemblies (3)
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Protein domain: AP1 clathrin adaptor core (1)
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Mouse (Mus musculus) [TaxId: 10090] (1)
1W63A:; B:; K:; L:; M:; N:; O:; P:; Q:; R:; S:; T:; C:; U:; V:; W:; X:; D:; E:; F:; G:; H:; I:; J:AP1 CLATHRIN ADAPTOR CORE
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Protein domain: Clathrin D6 coat (2)
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Cow (Bos taurus) [TaxId: 9913] (2)
1XI4A:; B:; K:; L:; M:; N:; O:; P:; Q:; R:; C:; D:; E:; F:; G:; H:; I:; J:CLATHRIN D6 COAT
1XI5A:; B:; C:; D:; E:; F:; G:; H:; I:; J:; K:; L:; M:; N:; O:; P:; Q:; R:CLATHRIN D6 COAT WITH AUXILIN J-DOMAIN
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Fold: Collagen fibre (1)
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Superfamily: Collagen fibre (1)
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Family: Collagen fibre (1)
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Protein domain: Collagen I alpha (1)
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Norway rat (Rattus norvegicus) [TaxId: 10116] (1)
3HQVA:; B:; C:LOW RESOLUTION, MOLECULAR ENVELOPE STRUCTURE OF TYPE I COLLAGEN IN SITU DETERMINED BY FIBER DIFFRACTION. SINGLE TYPE I COLLAGEN MOLECULE, RIGID BODY REFINEMENT
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Fold: Computational models partly based on experimental data (6)
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Superfamily: Computational models partly based on experimental data (6)
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Family: Computational models partly based on experimental data (6)
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Protein domain: Cytochrome c' (1)
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Rhodobacter capsulatus [TaxId: 1061] (1)
1EKYA:MODEL STRUCTURE FROM NON-NOE BASED NMR STRUCTURE CALCULATION
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Protein domain: Hypothetical protein PF1455 (1)
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Pyrococcus furiosus [TaxId: 2261] (1)
2F40A:2-74STRUCTURE OF A NOVEL PROTEIN FROM BACKBONE-CENTERED NMR DATA AND NMR-ASSISTED STRUCTURE PREDICTION
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Protein domain: Nodulation protein NodF (1)
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Rhizobium leguminosarum [TaxId: 384] (1)
1FH1A:BACKBONE FOLD OF NODF
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Protein domain: Ribosomal L11 protein in complex with thiostrepton and a 23S rRNA fragment (1)
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Thermotoga maritima [TaxId: 2336] (1)
1OLNA:MODEL FOR THIOSTREPTON ANTIBIOTIC BINDING TO L11 SUBSTRATE FROM 50S RIBOSOMAL RNA
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Protein domain: Ternary complex formed between MarA, the alpha-CTD of RNA polymerase and DNA (1)
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Escherichia coli [TaxId: 562] (1)
1XS9A:A MODEL OF THE TERNARY COMPLEX FORMED BETWEEN MARA, THE ALPHA-CTD OF RNA POLYMERASE AND DNA
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Protein domain: Tumor suppressor p15(ink4b) (1)
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Mouse (Mus musculus) [TaxId: 10090] (1)
1D9SA:TUMOR SUPPRESSOR P15(INK4B) STRUCTURE BY COMPARATIVE MODELING AND NMR DATA
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Fold: Electron transport chains (4)
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Superfamily: Electron transport chains (4)
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Family: Electron transport chains (4)
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Protein domain: Cytochrome f-plastocyanin complex (2)
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Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223] (1)
2JXMB:1-246ENSEMBLE OF TWENTY STRUCTURES OF THE PROCHLOROTHRIX HOLLANDICA PLASTOCYANIN- CYTOCHROME F COMPLEX
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Plant (Spinacia oleracea) and (Brassica rapa) [TaxId: 3562] (1)
2PCFA:; B:THE COMPLEX OF CYTOCHROME F AND PLASTOCYANIN DETERMINED WITH PARAMAGNETIC NMR. BASED ON THE STRUCTURES OF CYTOCHROME F AND PLASTOCYANIN, 10 STRUCTURES
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Protein domain: Ferredoxin-cytochrome complex (1)
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interspecies complex: Desulfomicrobium norvegicum and Desulfovibrio vulgaris (1)
1DWLA:; B:THE FERREDOXIN-CYTOCHROME COMPLEX USING HETERONUCLEAR NMR AND DOCKING SIMULATION
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Protein domain: [Fe]-hydrogenase/cytochrome c553 complex (1)
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interspecies complex: Desulfovibrio desulfuricans and Desulfovibrio vulgaris (1)
1E08A:; D:; E:STRUCTURAL MODEL OF THE [FE]-HYDROGENASE/CYTOCHROME C553 COMPLEX COMBINING NMR AND SOFT-DOCKING
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Fold: Ep-cadherin (4)
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Superfamily: Ep-cadherin (4)
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Family: Ep-cadherin (4)
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Protein domain: Ep-cadherin (4)
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Mouse (Mus musculus) [TaxId: 10090] (4)
1Q55A:; B:; C:; D:W-SHAPED TRANS INTERACTIONS OF CADHERINS MODEL BASED ON FITTING C-CADHERIN (1L3W) TO 3D MAP OF DESMOSOMES OBTAINED BY ELECTRON TOMOGRAPHY
1Q5AA:; B:S-SHAPED TRANS INTERACTIONS OF CADHERINS MODEL BASED ON FITTING C-CADHERIN (1L3W) TO 3D MAP OF DESMOSOMES OBTAINED BY ELECTRON TOMOGRAPHY
1Q5BA:; B:; C:LAMBDA-SHAPED TRANS AND CIS INTERACTIONS OF CADHERINS MODEL BASED ON FITTING C-CADHERIN (1L3W) TO 3D MAP OF DESMOSOMES OBTAINED BY ELECTRON TOMOGRAPHY
1Q5CA:; B:; C:; D:S-S-LAMBDA-SHAPED TRANS AND CIS INTERACTIONS OF CADHERINS MODEL BASED ON FITTING C-CADHERIN (1L3W) TO 3D MAP OF DESMOSOMES OBTAINED BY ELECTRON TOMOGRAPHY
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Fold: Fatty acid synthase (2)
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Superfamily: Fatty acid synthase (2)
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Family: Fatty acid syntase (2)
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Protein domain: Fungal fatty acid syntase (1)
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Thermomyces lanuginosus [TaxId: 5541] (1)
2CDHS:10-289ARCHITECTURE OF THE THERMOMYCES LANUGINOSUS FUNGAL FATTY ACID SYNTHASE AT 5 ANGSTROM RESOLUTION.
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Protein domain: mammalian fatty acid synthase (1)
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Pig (Sus scrofa) [TaxId: 9823] (1)
2CF2E:2-239; N:2-239ARCHITECTURE OF MAMMALIAN FATTY ACID SYNTHASE
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Fold: GroE chaperon (3)
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Superfamily: GroE chaperon (3)
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Family: GroE chaperon (3)
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Protein domain: GroE chaperon (3)
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Escherichia coli [TaxId: 562] (3)
1GR5A:; B:; C:; D:; E:; F:; G:; H:; I:; J:; K:; L:; M:; N:SOLUTION STRUCTURE OF APO GROEL BY CRYO-ELECTRON MICROSCOPY
1GRUA:; B:; C:; D:; E:; F:; G:; H:; I:; J:; K:; L:; M:; N:; O:; P:; Q:; R:; S:; T:; U:SOLUTION STRUCTURE OF GROES-ADP7-GROEL-ATP7 COMPLEX BY CRYO-EM
2C7EA:; B:; K:; L:; M:; N:; C:; D:; E:; F:; G:; H:; I:; J:REVISED ATOMIC STRUCTURE FITTING INTO A GROEL(D398A)-ATP7 CRYO-EM MAP (EMD 1047)
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Fold: Helicase (2)
(-)
Superfamily: Helicase (2)
(-)
Family: Helicase (2)
(-)
Protein domain: RecA (2)
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Escherichia coli [TaxId: 562] (2)
1N03A:; B:; C:; D:; E:; F:; G:MODEL FOR ACTIVE RECA FILAMENT
2RECA:; D:; E:; F:; B:; C:RECA HEXAMER MODEL, ELECTRON MICROSCOPY
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Fold: Membrane ion ATPase (1)
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Superfamily: Membrane ion ATPase (1)
(-)
Family: Membrane ion ATPase (1)
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Protein domain: Proton ATPase (1)
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Fungus (Neurospora crassa) [TaxId: 5141] (1)
1MHSA:; B:MODEL OF NEUROSPORA CRASSA PROTON ATPASE
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Fold: Microtubule complexes (4)
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Superfamily: Microtubule complexes (4)
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Family: Microtubule complexes (4)
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Protein domain: Kif1a head-microtubule complex (1)
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interspecies complex: Mus musculus and Sus scrofa (1)
1IA0A:; B:; K:KIF1A HEAD-MICROTUBULE COMPLEX STRUCTURE IN ATP-FORM
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Protein domain: Tubulin:stathmin-like domain complex (3)
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Cow (Bos taurus) [TaxId: 9913] (2)
2P4NA:2-439; B:2-437HUMAN MONOMERIC KINESIN (1BG2) AND BOVINE TUBULIN (1JFF) DOCKED INTO THE 9-ANGSTROM CRYO-EM MAP OF NUCLEOTIDE-FREE KINESIN COMPLEXED TO THE MICROTUBULE
3DU7A:2-439; B:2-437TUBULIN-COLCHICINE-PHOMOPSIN A: STATHMIN-LIKE DOMAIN COMPLEX
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interspecies complex: Rattus norvegicus and Bos taurus (1)
1FFXA:; B:; C:; D:; E:TUBULIN:STATHMIN-LIKE DOMAIN COMPLEX
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Fold: Muscle protein complexes (13)
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Superfamily: Muscle protein complexes (13)
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Family: Muscle protein complexes (13)
(-)
Protein domain: Actinin (1)
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Chicken (Gallus gallus) [TaxId: 9031] (1)
1SJJA:; B:CRYO-EM STRUCTURE OF CHICKEN GIZZARD SMOOTH MUSCLE ALPHA-ACTININ
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Protein domain: Averaged rigor crossbridges from tomograms of insect flight muscle (11)
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Chicken (Gallus gallus) and Rabbit (Oryctolagus cuniculus) [TaxId: 9031] (11)
1M8Q0:; 1:; 2:; 3:; 4:; 5:; 7:; 8:; 9:; A:; B:; C:; D:; E:; F:; G:; H:; I:; P:; Q:; R:; V:; W:; X:; Y:; Z:MOLECULAR MODELS OF AVERAGED RIGOR CROSSBRIDGES FROM TOMOGRAMS OF INSECT FLIGHT MUSCLE
1MVW1:; 2:; 3:; 4:; 5:; 6:; 7:; 8:; 9:; A:; B:; C:; D:; E:; F:; G:; H:; I:; J:; K:; L:; M:; N:; O:; P:; Q:; R:; V:; W:; X:; Y:; Z:MOLECULAR MODELS OF AVERAGED RIGOR CROSSBRIDGES FROM TOMOGRAMS OF INSECT FLIGHT MUSCLE
1O181:; 2:; 3:; 4:; 5:; 6:; 7:; 8:; 9:; A:; D:; E:; F:; G:; H:; I:; J:; K:; L:; M:; N:; O:; P:; Q:; R:; V:; W:; X:; Y:; Z:MOLECULAR MODELS OF AVERAGED RIGOR CROSSBRIDGES FROM TOMOGRAMS OF INSECT FLIGHT MUSCLE
1O191:; 2:; 3:; 4:; 5:; 6:; 7:; 8:; 9:; A:; B:; C:; D:; E:; F:; G:; H:; I:; J:; K:; L:; M:; N:; O:; S:; T:; U:; V:; W:; X:; Y:; Z:MOLECULAR MODELS OF AVERAGED RIGOR CROSSBRIDGES FROM TOMOGRAMS OF INSECT FLIGHT MUSCLE
1O1A1:; 2:; 3:; 4:; 5:; 6:; 7:; 8:; 9:; A:; B:; C:; D:; E:; F:; G:; H:; I:; J:; K:; L:; M:; N:; O:; P:; Q:; R:; V:; W:; X:; Y:; Z:MOLECULAR MODELS OF AVERAGED RIGOR CROSSBRIDGES FROM TOMOGRAMS OF INSECT FLIGHT MUSCLE
1O1B0:; 1:; 2:; 3:; 4:; 5:; 7:; 8:; 9:; A:; B:; C:; D:; E:; F:; G:; H:; I:; J:; K:; L:; V:; W:; X:; Y:; Z:MOLECULAR MODELS OF AVERAGED RIGOR CROSSBRIDGES FROM TOMOGRAMS OF INSECT FLIGHT MUSCLE
1O1C0:; Q:; R:; V:; W:; X:; Y:; Z:; 1:; 2:; 3:; 4:; 5:; 7:; 8:; 9:; A:; B:; C:; D:; E:; F:; G:; H:; I:; J:; K:; L:; P:MOLECULAR MODELS OF AVERAGED RIGOR CROSSBRIDGES FROM TOMOGRAMS OF INSECT FLIGHT MUSCLE
1O1D0:; 1:; 2:; 3:; 4:; 5:; 7:; 8:; 9:; A:; B:; C:; D:; E:; F:; G:; H:; I:; J:; K:; L:; M:; N:; O:; P:; Q:; R:; V:; W:; X:; Y:; Z:MOLECULAR MODELS OF AVERAGED RIGOR CROSSBRIDGES FROM TOMOGRAMS OF INSECT FLIGHT MUSCLE
1O1E1:; 2:; 3:; 4:; 5:; 6:; 7:; 8:; 9:; A:; B:; C:; D:; E:; F:; G:; H:; I:; J:; K:; L:; M:; N:; O:; P:; Q:; R:; V:; W:; X:; Y:; Z:MOLECULAR MODELS OF AVERAGED RIGOR CROSSBRIDGES FROM TOMOGRAMS OF INSECT FLIGHT MUSCLE
1O1F0:; 1:; B:; C:; D:; E:; F:; G:; H:; I:; J:; K:; 2:; L:; V:; W:; X:; Y:; Z:; 3:; 4:; 5:; 6:; 7:; 8:; A:MOLECULAR MODELS OF AVERAGED RIGOR CROSSBRIDGES FROM TOMOGRAMS OF INSECT FLIGHT MUSCLE
1O1G1:; 2:; 3:; 4:; 5:; 6:; 7:; 8:; 9:; A:; B:; C:; D:; E:; F:; G:; H:; I:; J:; K:; L:; M:; N:; O:; P:; Q:; R:; V:; W:; X:; Y:; Z:MOLECULAR MODELS OF AVERAGED RIGOR CROSSBRIDGES FROM TOMOGRAMS OF INSECT FLIGHT MUSCLE
(-)
Protein domain: Heavy meromyosin subfragment (1)
(-)
Chicken (Gallus gallus) [TaxId: 9031] (1)
1I84S:; T:; U:; V:; W:; Z:CRYO-EM STRUCTURE OF THE HEAVY MEROMYOSIN SUBFRAGMENT OF CHICKEN GIZZARD SMOOTH MUSCLE MYOSIN WITH REGULATORY LIGHT CHAIN IN THE DEPHOSPHORYLATED STATE. ONLY C ALPHAS PROVIDED FOR REGULATORY LIGHT CHAIN. ONLY BACKBONE ATOMS PROVIDED FOR S2 FRAGMENT.
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Fold: Photosystems (8)
(-)
Superfamily: Photosystems (8)
(-)
Family: Photosystems (8)
(-)
Protein domain: Chlorophyll a-b binding protein (1)
(-)
Pea (Pisum sativum) [TaxId: 3888] (1)
1VCRA:AN ICOSAHEDRAL ASSEMBLY OF LIGHT-HARVESTING CHLOROPHYLL A/B PROTEIN COMPLEX FROM PEA THYLAKOID MEMBRANES
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Protein domain: Photosynthetic reaction center and core antenna system (trimeric) (1)
(-)
Synechococcus elongatus [TaxId: 32046] (1)
1C51A:; B:; C:; D:; E:; F:; K:; L:PHOTOSYNTHETIC REACTION CENTER AND CORE ANTENNA SYSTEM (TRIMERIC), ALPHA CARBON ONLY
(-)
Protein domain: Photosystem II (4)
(-)
Thermosynechococcus elongatus, bp-1 (formerly Synechococcus elongatus) [TaxId: 146786] (2)
1FE1A:; B:; C:; D:; E:; F:; G:; H:; I:; J:; K:; L:; M:; N:; O:; P:; Q:; R:CRYSTAL STRUCTURE PHOTOSYSTEM II
1ILXA:; B:; K:; L:; M:; N:; O:; P:; Q:; R:; C:; D:; E:; F:; G:; H:; I:; J:EXCITED STATE DYNAMICS IN PHOTOSYSTEM II REVISED. NEW INSIGHTS FROM THE X-RAY STRUCTURE.
(-)
Thermosynechococcus vulcanus [TaxId: 32053] (2)
1IZL0:; 1:; I:; J:; K:; L:; M:; N:; O:; P:; Q:; R:; A:; S:; T:; U:; V:; W:; X:; Y:; Z:; B:; C:; D:; E:; F:; G:; H:CRYSTAL STRUCTURE OF PHOTOSYSTEM II
1W5CA:; B:; C:; D:; E:; F:; G:; H:; I:; J:; K:; L:; T:; V:PHOTOSYSTEM II FROM THERMOSYNECHOCOCCUS ELONGATUS
(-)
Protein domain: Plant photosystem I (1)
(-)
Pea (Pisum sativum) [TaxId: 3888] (1)
1QZV0:; 1:; A:; B:; C:; D:; E:; F:; G:; H:; I:; J:; 2:; K:; L:; P:; Q:; R:; S:; T:; U:; V:; W:; 3:; Y:; Z:; 4:; 5:; 6:; 7:; 8:; 9:CRYSTAL STRUCTURE OF PLANT PHOTOSYSTEM I
(-)
Protein domain: RC-LH1 core complex (1)
(-)
Rhodopseudomonas palustris [TaxId: 1076] (1)
1PYH1:; 2:; C:; D:; E:; F:; G:; H:; I:; J:; K:; L:; 3:; M:; N:; O:; P:; Q:; R:; S:; T:; U:; V:; 4:; W:; X:; Y:; Z:; 5:; 6:; 7:; 8:; A:; B:CRYSTAL STRUCTURE OF RC-LH1 CORE COMPLEX FROM RHODOPSEUDOMONAS PALUSTRIS
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Fold: Proteins of incorrect, partial and unknown sequence (12)
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Superfamily: Proteins of incorrect, partial and unknown sequence (12)
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Family: Proteins of incorrect, partial and unknown sequence (12)
(-)
Protein domain: Catalase (1)
(-)
Penicillium vitale [TaxId: 5079] (1)
4CATA:; B:THREE-DIMENSIONAL STRUCTURE OF CATALASE FROM PENICILLIUM VITALE AT 2.0 ANGSTROMS RESOLUTION
(-)
Protein domain: Dihydrolipoamide dehydrogenase (1)
(-)
Pig (Sus scrofa) [TaxId: 9823] (1)
1IVIA:; B:; C:; D:; E:CRYSTAL STRUCTURE OF PIG DIHYDROLIPOAMIDE DEHYDROGENASE
(-)
Protein domain: Glutathione reductase (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1GRHA:INHIBITION OF HUMAN GLUTATHIONE REDUCTASE BY THE NITROSOUREA DRUGS 1, 3-BIS(2-CHLOROETHYL)-1-NITROSOUREA AND 1-(2-CHLOROETHYL)-3-(2-HYDROXYETHYL)-1-NITROSOUREA
(-)
Protein domain: Hemerythrin (1)
(-)
Siphonosoma [TaxId: 6443] (1)
1HR3A:; B:; C:STRUCTURE OF TRIMERIC HAEMERYTHRIN
(-)
Protein domain: Hexokinase (2)
(-)
Baker's yeast (Saccharomyces cerevisiae), A [TaxId: 4932] (1)
1HKGA:STRUCTURAL DYNAMICS OF YEAST HEXOKINASE DURING CATALYSIS
(-)
Baker's yeast (Saccharomyces cerevisiae), BIII [TaxId: 4932] (1)
2YHXA:SEQUENCING A PROTEIN BY X-RAY CRYSTALLOGRAPHY. II. REFINEMENT OF YEAST HEXOKINASE B CO-ORDINATES AND SEQUENCE AT 2.1 ANGSTROMS RESOLUTION
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Protein domain: KDPG aldolase (1)
(-)
Pseudomonas putida [TaxId: 303] (1)
1KGAA:STRUCTURE OF 2-KETO-3-DEOXY-6-PHOSPHOGLUCONATE ALDOLASE AT 2.8 ANGSTROMS RESOLUTION
(-)
Protein domain: Lactate dehydrogenase (1)
(-)
Dogfish (Squalus acanthias) [TaxId: 7797] (1)
3LDHA:A COMPARISON OF THE STRUCTURES OF APO DOGFISH M4 LACTATE DEHYDROGENASE AND ITS TERNARY COMPLEXES
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Protein domain: Phosphoglycerate kinase (1)
(-)
Horse (Equus caballus) [TaxId: 9796] (1)
2PGKA:THE USE OF PHASE COMBINATION IN THE REFINEMENT OF PHOSPHOGLYCERATE KINASE AT 2.5 ANGSTROMS RESOLUTION
(-)
Protein domain: Pyruvate kinase (1)
(-)
Cat (Felis catus) [TaxId: 9685] (1)
1PYKA:CRYSTAL STRUCTURE OF CAT MUSCLE PYRUVATE KINASE AT A RESOLUTION OF 2.6 ANGSTROMS
(-)
Protein domain: Serum amyloid P component, SAP (1)
(-)
Horseshoe crab (Limulus polyphemus) [TaxId: 6850] (1)
1QTJA:; B:CRYSTAL STRUCTURE OF LIMULUS POLYPHEMUS SAP
(-)
Protein domain: TNV coat protein (1)
(-)
TNV (Tobacco necrosis virus) [TaxId: 12054] (1)
1TNVA:; B:; C:CRYSTAL STRUCTURAL ANALYSIS OF TOBACCO NECROSIS VIRUS (TNV) AT 5 ANGSTROMS RESOLUTION
(-)
Fold: Reovirus components (3)
(-)
Superfamily: Reovirus components (3)
(-)
Family: Reovirus components (3)
(-)
Protein domain: Minor core protein lambda 3 (1)
(-)
Reovirus [TaxId: 10891] (1)
1UONA:REOVIRUS POLYMERASE LAMBDA-3 LOCALIZED BY ELECTRON CRYOMICROSCOPY OF VIRIONS AT 7.6-A RESOLUTION
(-)
Protein domain: outer-capsid protein mu1 and reovirus core (1)
(-)
Mammalian orthoreovirus 3 [TaxId: 538123] (1)
2CSEU:587-660FEATURES OF REOVIRUS OUTER-CAPSID PROTEIN MU1 REVEALED BY ELECTRON AND IMAGE RECONSTRUCTION OF THE VIRION AT 7.0-A RESOLUTION
(-)
Protein domain: Reovirus core (1)
(-)
Reovirus sp. [TaxId: 10891] (1)
1EJ6A:; B:; C:; D:; E:REOVIRUS CORE
(-)
Fold: Ribosome and ribosomal fragments (154)
(-)
Superfamily: Ribosome and ribosomal fragments (154)
(-)
Family: Large subunit (36)
(-)
Protein domain: 50S subunit (36)
(-)
Deinococcus radiodurans [TaxId: 1299] (12)
1J5AK:; L:; M:STRUCTURAL BASIS FOR THE INTERACTION OF ANTIBIOTICS WITH THE PEPTIDYL TRANSFERASE CENTER IN EUBACTERIA
1JZXK:; L:; M:STRUCTURAL BASIS FOR THE INTERACTION OF ANTIBIOTICS WITH THE PEPTIDYL TRANSFERASE CENTER IN EUBACTERIA
1JZYK:; L:; M:STRUCTURAL BASIS FOR THE INTERACTION OF ANTIBIOTICS WITH THE PEPTIDYL TRANSFERASE CENTER IN EUBACTERIA
1JZZK:; L:; M:STRUCTURAL BASIS FOR THE INTERACTION OF ANTIBIOTICS WITH THE PEPTIDYL TRANSFERASE CENTER IN EUBACTERIA
1K01K:; L:; M:STRUCTURAL BASIS FOR THE INTERACTION OF ANTIBIOTICS WITH THE PEPTIDYL TRANSFERASE CENTER IN EUBACTERIA
1NJMK:; T:THE CRYSTAL STRUCTURE OF THE 50S LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS COMPLEXED WITH A TRNA ACCEPTOR STEM MIMIC (ASM) AND THE ANTIBIOTIC SPARSOMYCIN
1NJPK:; T:THE CRYSTAL STRUCTURE OF THE 50S LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS COMPLEXED WITH A TRNA ACCEPTOR STEM MIMIC (ASM)
1NKW1:; 2:; G:; H:; I:; J:; K:; L:; M:; N:; O:; P:; 3:; Q:; R:; S:; T:; U:; W:; X:; Y:; Z:; 4:; A:; B:; C:; D:; E:; F:CRYSTAL STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS
1NWX1:; 2:; 3:; 4:; A:; B:; C:; D:; E:; F:; G:; H:; I:; J:; K:; L:; M:; N:; O:; P:; Q:; R:; S:; T:; U:; W:; X:; Y:; Z:COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH ABT-773
1NWY1:; 2:; 3:; 4:; A:; B:; C:; D:; E:; F:; G:; H:; I:; J:; K:; L:; M:; N:; O:; P:; Q:; R:; S:; T:; U:; W:; X:; Y:; Z:COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH AZITHROMYCIN
1ONDQ:; Z:THE CRYSTAL STRUCTURE OF THE 50S LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS COMPLEXED WITH TROLEANDOMYCIN MACROLIDE ANTIBIOTIC
1SM11:; 2:; 3:; 4:; A:; B:; C:; D:; E:; F:; G:; H:; I:; J:; K:; L:; M:; N:; O:; P:; Q:; R:; S:; T:; U:; W:; X:; Y:; Z:COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH QUINUPRISTIN AND DALFOPRISTIN
(-)
Escherichia coli [TaxId: 562] (1)
487DH:; I:; J:; K:; L:; M:; N:SEVEN RIBOSOMAL PROTEINS FITTED TO A CRYO-ELECTRON MICROSCOPIC MAP OF THE LARGE 50S SUBUNIT AT 7.5 ANGSTROMS RESOLUTION
(-)
Haloarcula marismortui [TaxId: 2238] (20)
1C04A:; B:; C:; D:IDENTIFICATION OF KNOWN PROTEIN AND RNA STRUCTURES IN A 5 A MAP OF THE LARGE RIBOSOMAL SUBUNIT FROM HALOARCULA MARISMORTUI
1W2B1:; 2:; 5:; A:; B:; C:; D:; E:; F:; G:; H:; I:; J:; K:; L:; M:; N:; O:; P:; R:; S:; T:; U:; V:; W:; X:; Y:; Z:TRIGGER FACTOR RIBOSOME BINDING DOMAIN IN COMPLEX WITH 50S
2QA41:1-56; 3:1-92; D:10-174; J:4-145; L:1-150; N:1-186; O:1-115; Q:1-95; T:1-119; U:4-56; V:1-65; W:1-154; X:7-88A MORE COMPLETE STRUCTURE OF THE THE L7/L12 STALK OF THE HALOARCULA MARISMORTUI 50S LARGE RIBOSOMAL SUBUNIT
2QEX1:1-56; 3:1-92; D:10-174; J:4-145; L:1-150; N:1-186; O:1-115; Q:1-95; T:1-119; U:4-56; V:1-65; W:1-154; X:7-88NEGAMYCIN BINDS TO THE WALL OF THE NASCENT CHAIN EXIT TUNNEL OF THE 50S RIBOSOMAL SUBUNIT
3CC21:1-56; 3:1-92; Q:1-95; T:1-119; U:4-56; V:1-65; W:1-154; X:7-88; D:10-174; G:12-73; J:4-145; K:1-132; L:1-150; M:1-193; N:1-186; O:1-115THE REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION WITH RRNA SEQUENCE FOR THE 23S RRNA AND GENOME-DERIVED SEQUENCES FOR R-PROTEINS
3CC41:1-56; 3:1-92; D:10-174; J:4-145; K:1-132; L:1-150; N:1-186; O:1-115; Q:1-95; T:1-119; U:4-56; V:1-65; W:1-154; X:7-88CO-CRYSTAL STRUCTURE OF ANISOMYCIN BOUND TO THE 50S RIBOSOMAL SUBUNIT
3CC71:1-56; 3:1-92; D:10-174; J:4-145; K:1-132; L:1-150; N:1-186; O:1-115; Q:1-95; T:1-119; U:4-56; V:1-65; W:1-154; X:7-88STRUCTURE OF ANISOMYCIN RESISTANT 50S RIBOSOMAL SUBUNIT: 23S RRNA MUTATION C2487U
3CCE1:1-56; 3:1-92; D:10-174; J:4-145; K:1-132; L:1-150; N:1-186; O:1-115; Q:1-95; T:1-119; U:4-56; V:1-65; W:1-154; X:7-88STRUCTURE OF ANISOMYCIN RESISTANT 50S RIBOSOMAL SUBUNIT: 23S RRNA MUTATION U2535A
3CCJ1:1-56; 3:1-92; D:10-174; J:4-145; K:1-132; L:1-150; N:1-186; O:1-115; Q:1-95; T:1-119; U:4-56; V:1-65; W:1-154; X:7-88STRUCTURE OF ANISOMYCIN RESISTANT 50S RIBOSOMAL SUBUNIT: 23S RRNA MUTATION C2534U
3CCL1:1-56; 3:1-92; D:10-174; J:4-145; K:1-132; L:1-150; N:1-186; O:1-115; Q:1-95; T:1-119; U:4-56; V:1-65; W:1-154; X:7-88STRUCTURE OF ANISOMYCIN RESISTANT 50S RIBOSOMAL SUBUNIT: 23S RRNA MUTATION U2535C. DENSITY FOR ANISOMYCIN IS VISIBLE BUT NOT INCLUDED IN MODEL.
3CCM1:1-56; 3:1-92; D:10-174; J:4-145; K:1-132; L:1-150; N:1-186; O:1-115; Q:1-95; T:1-119; U:4-56; V:1-65; W:1-154; X:7-88STRUCTURE OF ANISOMYCIN RESISTANT 50S RIBOSOMAL SUBUNIT: 23S RRNA MUTATION G2611U
3CCQ1:1-56; 3:1-92; D:10-174; J:4-145; K:1-132; L:1-150; N:1-186; O:1-115; Q:1-95; T:1-119; U:4-56; V:1-65; W:1-154; X:7-88STRUCTURE OF ANISOMYCIN RESISTANT 50S RIBOSOMAL SUBUNIT: 23S RRNA MUTATION A2488U
3CCR1:1-56; 3:1-92; D:10-174; J:4-145; K:1-132; L:1-150; N:1-186; O:1-115; Q:1-95; T:1-119; U:4-56; V:1-65; W:1-154; X:7-88STRUCTURE OF ANISOMYCIN RESISTANT 50S RIBOSOMAL SUBUNIT: 23S RRNA MUTATION A2488C. DENSITY FOR ANISOMYCIN IS VISIBLE BUT NOT INCLUDED IN THE MODEL.
3CCS1:1-56; 3:1-92; D:10-174; J:4-145; K:1-132; L:1-150; N:1-186; O:1-115; Q:1-95; T:1-119; U:4-56; V:1-65; W:1-154; X:7-88STRUCTURE OF ANISOMYCIN RESISTANT 50S RIBOSOMAL SUBUNIT: 23S RRNA MUTATION G2482A
3CCU1:1-56; 3:1-92; D:10-174; J:4-145; K:1-132; L:1-150; N:1-186; O:1-115; Q:1-95; T:1-119; U:4-56; V:1-65; W:1-154; X:7-88STRUCTURE OF ANISOMYCIN RESISTANT 50S RIBOSOMAL SUBUNIT: 23S RRNA MUTATION G2482C
3CCV1:1-56; 3:1-92; D:10-174; J:4-145; K:1-132; L:1-150; N:1-186; O:1-115; Q:1-95; T:1-119; U:4-56; V:1-65; W:1-154; X:7-88STRUCTURE OF ANISOMYCIN RESISTANT 50S RIBOSOMAL SUBUNIT: 23S RRNA MUTATION G2616A
3CD61:1-56; 3:1-92; D:10-174; J:4-145; K:1-132; L:1-150; N:1-186; O:1-115; Q:1-95; T:1-119; U:4-56; V:1-65; W:1-154; X:7-88CO-CYSTAL OF LARGE RIBOSOMAL SUBUNIT MUTANT G2616A WITH CC-PUROMYCIN
3CMA1:1-56; 3:1-92; D:10-174; J:4-145; K:1-132; L:1-150; N:1-186; O:1-115; Q:1-95; T:1-119; U:4-56; V:1-65; W:1-154; X:7-88THE STRUCTURE OF CCA AND CCA-PHE-CAP-BIO BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
3CME1:1-56; 3:1-92; D:10-174; J:4-145; K:1-132; L:1-150; N:1-186; O:1-115; Q:1-95; T:1-119; U:4-56; V:1-65; W:1-154; X:7-88THE STRUCTURE OF CA AND CCA-PHE-CAP-BIO BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
3CPW2:1-92; D:10-174; I:4-145; J:1-132; K:1-150; M:1-186; N:1-115; P:1-95; S:1-119; T:4-56; U:1-65; V:1-154; W:7-88; Z:1-56THE STRUCTURE OF THE ANTIBIOTIC LINEZOLID BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI
(-)
Family: Ribosome complexes (103)
(-)
Protein domain: 70S ribosome functional complex (103)
(-)
Escherichia coli [TaxId: 562] (72)
1EG0A:; B:; C:; D:; E:; F:; G:; H:; J:; K:; N:FITTING OF COMPONENTS WITH KNOWN STRUCTURE INTO AN 11.5 A CRYO-EM MAP OF THE E.COLI 70S RIBOSOME
1JQMA:; B:FITTING OF L11 PROTEIN AND ELONGATION FACTOR G (EF-G) IN THE CRYO-EM MAP OF E. COLI 70S RIBOSOME BOUND WITH EF-G, GDP AND FUSIDIC ACID
1JQSA:; B:; C:FITTING OF L11 PROTEIN AND ELONGATION FACTOR G (DOMAIN G' AND V) IN THE CRYO-EM MAP OF E. COLI 70S RIBOSOME BOUND WITH EF-G AND GMPPCP, A NONHYDROLYSABLE GTP ANALOG
1JQTA:FITTING OF L11 PROTEIN IN THE LOW RESOLUTION CRYO-EM MAP OF E.COLI 70S RIBOSOME
1LS2A:FITTING OF EF-TU AND TRNA IN THE LOW RESOLUTION CRYO-EM MAP OF AN EF-TU TERNARY COMPLEX (GDP AND KIRROMYCIN) BOUND TO E. COLI 70S RIBOSOME
1MI6A:DOCKING OF THE MODIFIED RF2 X-RAY STRUCTURE INTO THE LOW RESOLUTION CRYO-EM MAP OF RF2 E.COLI 70S RIBOSOME
1MJ1A:; L:; O:; P:FITTING THE TERNARY COMPLEX OF EF-TU/TRNA/GTP AND RIBOSOMAL PROTEINS INTO A 13 A CRYO-EM MAP OF THE COLI 70S RIBOSOME
1ML5c:; E:; F:; G:; H:; I:; J:; K:; L:; M:; N:; O:; P:; Q:; R:; S:; T:; U:; V:; W:; X:; Z:STRUCTURE OF THE E. COLI RIBOSOMAL TERMINATION COMPLEX WITH RELEASE FACTOR 2
1PN6A:DOMAIN-WISE FITTING OF THE CRYSTAL STRUCTURE OF T.THERMOPHILUS EF-G INTO THE LOW RESOLUTION MAP OF THE RELEASE COMPLEX.PUROMYCIN.EFG.GDPNP OF E.COLI 70S RIBOSOME.
1PN7L:; O:COORDINATES OF S12, L11 PROTEINS AND P-TRNA, FROM THE 70S X-RAY STRUCTURE ALIGNED TO THE 70S CRYO-EM MAP OF E.COLI RIBOSOME
1PN8L:; O:COORDINATES OF S12, L11 PROTEINS AND E-SITE TRNA FROM 70S CRYSTAL STRUCTURE SEPARATELY FITTED INTO THE CRYO-EM MAP OF E.COLI 70S.EF-G.GDPNP COMPLEX. THE ATOMIC COORDINATES ORIGINALLY FROM THE E-SITE TRNA WERE FITTED IN THE POSITION OF THE HYBRID P/E-SITE TRNA.
1QZCL:COORDINATES OF S12, SH44, LH69 AND SRL SEPARATELY FITTED INTO THE CRYO-EM MAP OF EF-TU TERNARY COMPLEX (GDP.KIRROMYCIN) BOUND 70S RIBOSOME
1QZDA:EF-TU.KIRROMYCIN COORDINATES FITTED INTO THE CRYO-EM MAP OF EF-TU TERNARY COMPLEX (GDP.KIRROMYCIN) BOUND 70S RIBOSOME
1R2WA:COORDINATES OF L11 WITH 58NTS OF 23S RRNA FITTED INTO THE CRYO-EM MAP OF THE 70S RIBOSOME
1R2XA:COORDINATES OF L11 WITH 58NTS OF 23S RRNA FITTED INTO THE CRYO-EM MAP OF EF-TU TERNARY COMPLEX (GDP.KIRROMYCIN) BOUND 70S RIBOSOME
1T1MC:BINDING POSITION OF RIBOSOME RECYCLING FACTOR (RRF) ON THE E. COLI 70S RIBOSOME
2RDO1:3-52; P:1-11450S SUBUNIT WITH EF-G(GDPNP) AND RRF BOUND
3BBX1:3-52; P:1-114THE HSP15 PROTEIN FITTED INTO THE LOW RESOLUTION CRYO-EM MAP OF THE 50S.NC-TRNA.HSP15 COMPLEX
(-)
Haloarcula marismortui [TaxId: 2238] (1)
3CC2C:1-246THE REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION WITH RRNA SEQUENCE FOR THE 23S RRNA AND GENOME-DERIVED SEQUENCES FOR R-PROTEINS
(-)
Thermotoga maritima [TaxId: 2336] (2)
2JQ7A:8-140MODEL FOR THIOSTREPTON BINDING TO THE RIBOSOMAL L11-RNA
2K3FA:8-140RIBOSOMAL PROTEIN L11 FROM THERMOTOGA MARITIMA
(-)
Thermus thermophilus [TaxId: 274] (20)
1IBKB:; C:; D:; E:; F:; G:; H:; I:; J:; K:; L:; M:; N:; O:; P:; Q:; R:; S:; T:; V:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH THE ANTIBIOTIC PAROMOMYCIN
1IBLB:; D:; E:; F:; G:; H:; I:; J:; K:; L:; M:; N:; O:; P:; Q:; R:; S:; T:; V:; C:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH A MESSENGER RNA FRAGMENT AND COGNATE TRANSFER RNA ANTICODON STEM-LOOP BOUND AT THE A SITE AND WITH THE ANTIBIOTIC PAROMOMYCIN
1IBMB:; C:; D:; E:; F:; G:; H:; I:; J:; K:; L:; M:; N:; O:; P:; Q:; R:; S:; T:; V:STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH A MESSENGER RNA FRAGMENT AND COGNATE TRANSFER RNA ANTICODON STEM-LOOP BOUND AT THE A SITE
1JGOE:; F:; G:; H:; I:; J:; K:; L:; M:; N:; O:; P:; Q:; R:; S:; T:; U:; V:; W:; X:THE PATH OF MESSENGER RNA THROUGH THE RIBOSOME. THIS FILE, 1JGO, CONTAINS THE 30S RIBOSOME SUBUNIT, THREE TRNA, AND MRNA MOLECULES. 50S RIBOSOME SUBUNIT IS IN THE FILE 1GIY
1JGPE:; F:; G:; H:; I:; J:; K:; L:; M:; N:; O:; P:; Q:; R:; S:; T:; U:; V:; W:; X:THE PATH OF MESSENGER RNA THROUGH THE RIBOSOME. THIS FILE, 1JGP, CONTAINS THE 30S RIBOSOME SUBUNIT, THREE TRNA, AND MRNA MOLECULES. 50S RIBOSOME SUBUNIT IS IN THE FILE 1GIY
1JGQE:; F:; G:; H:; I:; J:; K:; L:; M:; N:; O:; P:; Q:; R:; S:; T:; U:; V:; W:; X:THE PATH OF MESSENGER RNA THROUGH THE RIBOSOME. THIS FILE, 1JGQ, CONTAINS THE 30S RIBOSOME SUBUNIT, THREE TRNA, AND MRNA MOLECULES. 50S RIBOSOME SUBUNIT IS IN THE FILE 1GIY
1MVRL:; O:DECODING CENTER & PEPTIDYL TRANSFERASE CENTER FROM THE X-RAY STRUCTURE OF THE THERMUS THERMOPHILUS 70S RIBOSOME, ALIGNED TO THE LOW RESOLUTION CRYO-EM MAP OF E.COLI 70S RIBOSOME
2OM7E:5-128STRUCTURAL BASIS FOR INTERACTION OF THE RIBOSOME WITH THE SWITCH REGIONS OF GTP-BOUND ELONGATION FACTORS
2R1GH:5-128COORDINATES OF THE THERMUS THERMOPHILUS 30S COMPONENTS NEIGHBORING RBFA AS OBTAINED BY FITTING INTO THE CRYO-EM MAP OF A 30S-RBFA COMPLEX
2UXBL:5-128; O:2-89; P:1-83; S:2-81CRYSTAL STRUCTURE OF AN EXTENDED TRNA ANTICODON STEM LOOP IN COMPLEX WITH ITS COGNATE MRNA GGGU IN THE CONTEXT OF THE THERMUS THERMOPHILUS 30S SUBUNIT.
2UXDL:5-128; O:2-89; P:1-83; S:2-81CRYSTAL STRUCTURE OF AN EXTENDED TRNA ANTICODON STEM LOOP IN COMPLEX WITH ITS COGNATE MRNA CGGG IN THE CONTEXT OF THE THERMUS THERMOPHILUS 30S SUBUNIT.
2VQEL:5-128; O:2-89; P:1-83; S:2-81MODIFIED URIDINES WITH C5-METHYLENE SUBSTITUENTS AT THE FIRST POSITION OF THE TRNA ANTICODON STABILIZE U-G WOBBLE PAIRING DURING DECODING
2VQFL:5-128; O:2-89; P:1-83; S:2-81MODIFIED URIDINES WITH C5-METHYLENE SUBSTITUENTS AT THE FIRST POSITION OF THE TRNA ANTICODON STABILIZE U-G WOBBLE PAIRING DURING DECODING
(-)
Family: Small subunit (15)
(-)
Protein domain: 30S subunit (13)
(-)
Thermus thermophilus [TaxId: 274] (13)
1DV4E:; G:PARTIAL STRUCTURE OF 16S RNA OF THE SMALL RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS
1EMIA:STRUCTURE OF 16S RRNA IN THE REGION AROUND RIBOSOMAL PROTEIN S8.
1FKAB:; E:; F:; G:; H:; I:; J:; K:; L:; M:; N:; O:; P:; Q:; R:; S:; T:; C:; D:STRUCTURE OF FUNCTIONALLY ACTIVATED SMALL RIBOSOMAL SUBUNIT AT 3.3 A RESOLUTION
1QD7C:; D:; E:; F:; G:; H:; I:; J:PARTIAL MODEL FOR 30S RIBOSOMAL SUBUNIT
2UXBE:5-154CRYSTAL STRUCTURE OF AN EXTENDED TRNA ANTICODON STEM LOOP IN COMPLEX WITH ITS COGNATE MRNA GGGU IN THE CONTEXT OF THE THERMUS THERMOPHILUS 30S SUBUNIT.
2UXDE:5-154CRYSTAL STRUCTURE OF AN EXTENDED TRNA ANTICODON STEM LOOP IN COMPLEX WITH ITS COGNATE MRNA CGGG IN THE CONTEXT OF THE THERMUS THERMOPHILUS 30S SUBUNIT.
2VQEE:5-154MODIFIED URIDINES WITH C5-METHYLENE SUBSTITUENTS AT THE FIRST POSITION OF THE TRNA ANTICODON STABILIZE U-G WOBBLE PAIRING DURING DECODING
2VQFE:5-154MODIFIED URIDINES WITH C5-METHYLENE SUBSTITUENTS AT THE FIRST POSITION OF THE TRNA ANTICODON STABILIZE U-G WOBBLE PAIRING DURING DECODING
(-)
Protein domain: 40S subunit (2)
(-)
Fold: RNA polymerase (26)
(-)
Superfamily: RNA polymerase (26)
(-)
Family: RNA polymerase (26)
(-)
Protein domain: Complete 12-subunit RNA polymerase II complex (23)
(-)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] (23)
1NIKA:; B:; C:; D:; E:; F:; G:; H:; I:; J:; K:; L:WILD TYPE RNA POLYMERASE II
1NT9A:; B:; C:; D:; E:; F:; G:; H:; I:; J:; K:; L:COMPLETE 12-SUBUNIT RNA POLYMERASE II
1PQVA:; B:; C:; D:; E:; F:; G:; H:; I:; J:; K:; L:; S:RNA POLYMERASE II-TFIIS COMPLEX
1R5UA:; B:; C:; E:; F:; H:; I:; J:; K:; L:; M:RNA POLYMERASE II TFIIB COMPLEX
1R9SA:; B:; C:; E:; F:; H:; I:; J:; K:; L:RNA POLYMERASE II STRAND SEPARATED ELONGATION COMPLEX, MATCHED NUCLEOTIDE
1R9TA:; B:; C:; E:; F:; H:; I:; J:; K:; L:RNA POLYMERASE II STRAND SEPARATED ELONGATION COMPLEX, MISMATCHED NUCLEOTIDE
1SFOA:; B:; C:; E:; F:; H:; I:; J:; K:; L:RNA POLYMERASE II STRAND SEPARATED ELONGATION COMPLEX
1WCMA:; B:; C:; D:; E:; F:; G:; H:; I:; J:; K:; L:COMPLETE 12-SUBUNIT RNA POLYMERASE II AT 3.8 ANG
1Y1VA:; B:; C:; D:; E:; F:; G:; H:; I:; J:; K:; L:; S:REFINED RNA POLYMERASE II-TFIIS COMPLEX
1Y1WA:; B:; C:; D:; E:; F:; G:; H:; I:; J:; K:; L:COMPLETE RNA POLYMERASE II ELONGATION COMPLEX
1Y1YA:; F:; G:; H:; I:; J:; K:; L:; S:; B:; C:; D:; E:RNA POLYMERASE II-TFIIS-DNA/RNA COMPLEX
1Y77A:; B:; C:; D:; E:; F:; G:; H:; I:; J:; K:; L:COMPLETE RNA POLYMERASE II ELONGATION COMPLEX WITH SUBSTRATE ANALOGUE GMPCPP
2B63D:15-75; G:1-79COMPLETE RNA POLYMERASE II-RNA INHIBITOR COMPLEX
2B8KD:15-7512-SUBUNIT RNA POLYMERASE II
2JA5D:15-75CPD LESION CONTAINING RNA POLYMERASE II ELONGATION COMPLEX A
2JA6D:15-75CPD LESION CONTAINING RNA POLYMERASE II ELONGATION COMPLEX B
2JA7D:15-75; P:15-75CPD LESION CONTAINING RNA POLYMERASE II ELONGATION COMPLEX C
2JA8D:15-75CPD LESION CONTAINING RNA POLYMERASE II ELONGATION COMPLEX D
2R7ZA:2-1455; D:4-221; G:1-171; K:1-114CISPLATIN LESION CONTAINING RNA POLYMERASE II ELONGATION COMPLEX
2R92A:2-1455; D:4-221; G:1-171; K:1-112ELONGATION COMPLEX OF RNA POLYMERASE II WITH ARTIFICIAL RDRP SCAFFOLD
2R93A:2-1455; D:4-221; G:1-171; K:1-112ELONGATION COMPLEX OF RNA POLYMERASE II WITH A HEPATITIS DELTA VIRUS-DERIVED RNA STEM LOOP
2VUMA:2-1455; D:4-221; G:1-171; K:1-114ALPHA-AMANITIN INHIBITED COMPLETE RNA POLYMERASE II ELONGATION COMPLEX
3CQZA:6-1450CRYSTAL STRUCTURE OF 10 SUBUNIT RNA POLYMERASE II IN COMPLEX WITH THE INHIBITOR ALPHA-AMANITIN
(-)
Protein domain: DNA-directed RNA polymerase alpha(2), beta, beta-prime and omega subunits (3)
(-)
Thermus aquaticus [TaxId: 271] (3)
1HQMA:; B:; C:; D:; E:CRYSTAL STRUCTURE OF THERMUS AQUATICUS CORE RNA POLYMERASE-INCLUDES COMPLETE STRUCTURE WITH SIDE-CHAINS (EXCEPT FOR DISORDERED REGIONS)-FURTHER REFINED FROM ORIGINAL DEPOSITION-CONTAINS ADDITIONAL SEQUENCE INFORMATION
1L9UA:; B:; N:; Q:; C:; D:; E:; H:; J:; K:; L:; M:THERMUS AQUATICUS RNA POLYMERASE HOLOENZYME AT 4 A RESOLUTION
1L9ZA:; B:; C:; D:; E:; H:THERMUS AQUATICUS RNA POLYMERASE HOLOENZYME/FORK-JUNCTION PROMOTER DNA COMPLEX AT 6.5 A RESOLUTION
(-)
Fold: Signal recognition particle (SRP) complex (1)
(-)
Superfamily: Signal recognition particle (SRP) complex (1)
(-)
Family: Signal recognition particle (SRP) complex (1)
(-)
Protein domain: Signal recognition particle (SRP) complex (1)
(-)
interspecies complex (1)
1RY1B:; C:; D:; S:; U:; W:STRUCTURE OF THE SIGNAL RECOGNITION PARTICLE INTERACTING WITH THE ELONGATION-ARRESTED RIBOSOME
(-)
Fold: Transferrin receptor-transferrin complex (1)
(-)
Superfamily: Transferrin receptor-transferrin complex (1)
(-)
Family: Transferrin receptor-transferrin complex (1)
(-)
Protein domain: Transferrin receptor-transferrin complex (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1SUVA:; B:; C:; D:; E:; F:STRUCTURE OF HUMAN TRANSFERRIN RECEPTOR-TRANSFERRIN COMPLEX
(-)
Fold: Virus envelope proteins (4)
(-)
Superfamily: Virus envelope proteins (4)
(-)
Family: Virus envelope proteins (4)
(-)
Protein domain: Virus envelope proteins (4)
(-)
Dengue virus [TaxId: 12637] (3)
1K4RA:; B:; C:STRUCTURE OF DENGUE VIRUS
1N6GA:; B:; C:THE STRUCTURE OF IMMATURE DENGUE-2 PRM PARTICLES
1P58A:; B:; C:; D:; E:; F:COMPLEX ORGANIZATION OF DENGUE VIRUS MEMBRANE PROTEINS AS REVEALED BY 9.5 ANGSTROM CRYO-EM RECONSTRUCTION
(-)
Yellow fever virus [TaxId: 11089] (1)
1NA4A:; B:; C:THE STRUCTURE OF IMMATURE YELLOW FEVER VIRUS PARTICLE
(-)
Fold: Viruses and virus-receptor complexes (17)
(-)
Superfamily: Viruses and virus-receptor complexes (17)
(-)
Family: Viruses and virus-receptor complexes (17)
(-)
Protein domain: Bacteriophage alpha3 assembly (1)
(-)
Bacteriophage alpha3 [TaxId: 10849] (1)
1M0F1:; 2:; 3:; 4:; B:; F:; G:STRUCTURAL STUDIES OF BACTERIOPHAGE ALPHA3 ASSEMBLY, CRYO-ELECTRON MICROSCOPY
(-)
Protein domain: Coxsackievirus b3 (m strain) with its cellular receptor car (1)
(-)
Human (Homo sapiens) [TaxId: 9606] (1)
1JEW1:; 2:; 3:; 4:; R:CRYO-EM STRUCTURE OF COXSACKIEVIRUS B3(M STRAIN) WITH ITS CELLULAR RECEPTOR, COXSACKIEVIRUS AND ADENOVIRUS RECEPTOR (CAR).
(-)
Protein domain: Decay-accelerating factor bound to echovirus 7 (1)
(-)
Human (Homo sapiens) and human echovirus 7 [TaxId: 9606] (1)
1M111:; 2:; 3:; R:STRUCTURAL MODEL OF HUMAN DECAY-ACCELERATING FACTOR BOUND TO ECHOVIRUS 7 FROM CRYO-ELECTRON MICROSCOPY
(-)
Protein domain: FMDV complexed with a neutralizing Fab fragment (1)
(-)
Foot-and-mouth disease virus [TaxId: 12110] (1)
1QGC1:; 2:; 3:; 4:; 5:STRUCTURE OF THE COMPLEX OF A FAB FRAGMENT OF A NEUTRALIZING ANTIBODY WITH FOOT AND MOUTH DISEASE VIRUS
(-)
Protein domain: HRV14 complexed with d1d2-ICAM-1 (1)
(-)
Human rhinovirus 14 [TaxId: 12131] (1)
1D3I1:; 2:; 3:; 4:; I:CRYO-EM STRUCTURE OF HUMAN RHINOVIRUS 14 (HRV14) COMPLEXED WITH A TWO-DOMAIN FRAGMENT OF ITS CELLULAR RECEPTOR, INTERCELLULAR ADHESION MOLECULE-1 (D1D2-ICAM-1). IMPLICATIONS FOR VIRUS-RECEPTOR INTERACTIONS. ALPHA CARBONS ONLY
(-)
Protein domain: HRV16 complexed with d1d2-ICAM-1 (1)
(-)
Human rhinovirus 16 [TaxId: 31708] (1)
1D3E1:; 2:; 3:; 4:; I:CRYO-EM STRUCTURE OF HUMAN RHINOVIRUS 16 (HRV16) COMPLEXED WITH A TWO-DOMAIN FRAGMENT OF ITS CELLULAR RECEPTOR, INTERCELLULAR ADHESION MOLECULE-1 (D1D2-ICAM-1). IMPLICATIONS FOR VIRUS-RECEPTOR INTERACTIONS. ALPHA CARBONS ONLY
(-)
Protein domain: p3 shell (5)
(-)
Bacteriophage PRD1 [TaxId: 10658] (5)
1GW7A:; B:; K:; L:; C:; D:; E:; F:; G:; H:; I:; J:QUASI-ATOMIC RESOLUTION MODEL OF BACTERIOPHAGE PRD1 CAPSID, OBTAINED BY COMBINED CRYO-EM AND X-RAY CRYSTALLOGRAPHY.
1GW8A:; B:; C:; D:; E:; F:; G:; H:; I:; J:; K:; L:QUASI-ATOMIC RESOLUTION MODEL OF BACTERIOPHAGE PRD1 SUS607 MUTANT, OBTAINED BY COMBINED CRYO-EM AND X-RAY CRYSTALLOGRAPHY.
1HB5A:; B:; C:; D:; E:; F:; G:; H:; I:QUASI-ATOMIC RESOLUTION MODEL OF BACTERIOPHAGE PRD1 P3-SHELL, OBTAINED BY COMBINED CRYO-EM AND X-RAY CRYSTALLOGRAPHY.
1HB7A:; B:; C:; D:; E:; F:; G:; H:; I:; J:; K:; L:QUASI-ATOMIC RESOLUTION MODEL OF BACTERIOPHAGE PRD1 SUS1 MUTANT, OBTAINED BY COMBINED CRYO-EM AND X-RAY CRYSTALLOGRAPHY.
1HB9A:; B:; C:; D:; E:; F:; G:; H:; I:; J:; K:; L:QUASI-ATOMIC RESOLUTION MODEL OF BACTERIOPHAGE PRD1 WILD TYPE VIRION, OBTAINED BY COMBINED CRYO-EM AND X-RAY CRYSTALLOGRAPHY.
(-)
Protein domain: PBCV-1 virus capsid, quasi-atomic model (1)
(-)
Paramecium bursaria chlorella virus 1, PBCV-1 [TaxId: 10506] (1)
1M4XA:; B:; C:PBCV-1 VIRUS CAPSID, QUASI-ATOMIC MODEL
(-)
Protein domain: Poliovirus complexed with three domain CD155 (2)
(-)
Human poliovirus type 1 [TaxId: 12080] (2)
1DGI1:; 4:; R:; 2:; 3:CRYO-EM STRUCTURE OF HUMAN POLIOVIRUS(SEROTYPE 1)COMPLEXED WITH THREE DOMAIN CD155
1NN81:; 2:; 3:; 4:; R:; S:; T:CRYOEM STRUCTURE OF POLIOVIRUS RECEPTOR BOUND TO POLIOVIRUS
(-)
Protein domain: PRD1 capsid assembly (1)
(-)
Bacteriophage PRD1 [TaxId: 10658] (1)
1W8XA:; B:; K:; L:; M:; N:; P:; C:; D:; E:; F:; G:; H:; I:; J:STRUCTURAL ANALYSIS OF PRD1
(-)
Protein domain: SFV capsid (1)
(-)
Semliki forest virus [TaxId: 11033] (1)
1DYLA:; B:; C:; D:9 ANGSTROM RESOLUTION CRYO-EM RECONSTRUCTION STRUCTURE OF SEMLIKI FOREST VIRUS (SFV) AND FITTING OF THE CAPSID PROTEIN STRUCTURE IN THE EM DENSITY
(-)
Protein domain: Structural proteins (1)
(-)
Sindbis virus [TaxId: 11034] (1)
1LD4A:; B:; K:; L:; M:; N:; O:; P:; C:; D:; E:; F:; G:; H:; I:; J:PLACEMENT OF THE STRUCTURAL PROTEINS IN SINDBIS VIRUS