Chain A from PDB Type:PROTEIN Length:405
aligned with EFTU_THEAQ | Q01698 from UniProtKB/Swiss-Prot Length:406
Alignment length:405
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 381 391 401
EFTU_THEAQ 2 AKGEFIRTKPHVNVGTIGHVDHGKTTLTAALTYVAAAENPNVEVKDYGDIDKAPEERARGITINTAHVEYETAKRHYSHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVFMNKVDMVDDPELLDLVEMEVRDLLNQYEFPGDEVPVIRGSALLALEEMHKNPKTKRGENEWVDKIWELLDAIDEYIPTPVRDVDKPFLMPVEDVFTITGRGTVATGRIERGKVKVGDEVEIVGLAPETRKTVVTGVEMHRKTLQEGIAGDNVGLLLRGVSREEVERGQVLAKPGSITPHTKFEASVYILKKEEGGRHTGFFTGYRPQFYFRTTDVTGVVRLPQGVEMVMPGDNVTFTVELIKPVALEEGLRFAIREGGRTVGAGVVTKILE 406
SCOP domains d1mj1a_ A: 70S ribosome functional complex SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .........eeeeeeee.....hhhhhhhhhhhhhhhhh......hhhhhh.hhhhhhh......eeeeee...eeeeeee...hhhhhhhhhhhhh....eeeeee.....hhhhhhhhhhhhhh....eeeeeehhhhh.hhhhhhhhhhhhhhhhhhh........eee.hhhhhhhhhhhhh......hhhhhhhhhhhhhhhhh............eeeeeeeeee...eeeeeeeeee.eee...eeeee......eeeeeeeee.......eee...eeeeee...hhhhh....eee.......eeeeeeeeee.hhhhh............eeee..eeeeeeeee...........eeeeeeeeeeee......eeeeee..eeeeeeeeeee.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) --------------------------------------------------G_TR_1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1mj1 A 1 AKGEFIRTKRHVNVGTIGHVDHGKTTLTAALTYVAAAENRNVEVKDYGDIDKAREERARGITINTAHVEYETAKRHYSHVDCRGHADYIKNMITGAAQMDGAILVVSAADGRMRQTREHILLARQVGVRYIVVFMNKVDMVDDRELLDLVEMEVRDLLNQYEFRGDEVRVIRGSALLALEEMHKNRKTKRGENEWVDKIWELLDAIDEYIRTRVRDVDKRFLMRVEDVFTITGRGTVATGRIERGKVKVGDEVEIVGLARETRKTVVTGVEMHRKTLQEGIAGDNVGLLLRGVSREEVERGQVLAKRGSITRHTKFEASVYILKKEEGGRHTGFFTGYRRQFYFRTTDVTGVVRLRQGVEMVMRGDNVTFTVELIKRVALEEGLRFAIREGGRTVGAGVVTKILE 405
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400
Chain C from PDB Type:RNA Length:76
1mj1 C 1 GCGGAUUUAgCUCAGuuGGGAGAGCgCCAGAcUgAAgAucUGGAGgUCcUGUGuuCGaUCCACAGAAUUCGCACCA 76
10 || 20 | 30 | | | 40 | 50 || |60 70
10-2MG || 26-M2G | | | || | | 55-PSU
16-H2U 32-OMC| || | | | 58-1MA
17-H2U 34-OMG|| | | |
37-YG | | |
39-PSU | | |
40-5MC | | |
46-7MG |
49-5MC|
54-5MU
Chain D from PDB Type:RNA Length:76
1mj1 D 1 GCGGAUUUAgCUCAGuuGGGAGAGCgCCAGAcUgAAgAucUGGAGgUCcUGUGuuCGaUCCACAGAAUUCGCACCA 76
10 || 20 | 30 | | | 40 | 50 || |60 70
10-2MG || 26-M2G | | | || | | 55-PSU
16-H2U 32-OMC| || | | | 58-1MA
17-H2U 34-OMG|| | | |
37-YG | | |
39-PSU | | |
40-5MC | | |
46-7MG |
49-5MC|
54-5MU
Chain L from PDB Type:PROTEIN Length:133
SCOP domains d1mj1l_ L: 70S ribosome functional complex SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..................................................................................................................................... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------- Transcript
1mj1 L 1 QIKLQLPAGKATPAPPVGPALGQHGVNIMEFCKRFNAETADKAGMILPVVITVYEDKSFTFIIKTPPASFLLKKAAGIEKGSSEPKRKIVGKVTRKQIEEIAKTKMPDLNANSLEAAMKIIEGTAKSMGIEVV 133
10 20 30 40 50 60 70 80 90 100 110 120 130
Chain O from PDB Type:PROTEIN Length:124
SCOP domains d1mj1o_ O: 70S ribosome functional complex SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ............................................................................................................................ Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------- Transcript
1mj1 O 1 PTINQLVRKGREKVRKKSKVPALKGAPFRRGVCTVVRTVTPKKPNSALRKVAKVRLTSGYEVTAYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGVYDAAGVKDRKKSRSKYGTKKPKEA 124
10 20 30 40 50 60 70 80 90 100 110 120
Chain P from PDB Type:PROTEIN Length:125
aligned with RS13_THET8 | P80377 from UniProtKB/Swiss-Prot Length:126
Alignment length:125
11 21 31 41 51 61 71 81 91 101 111 121
RS13_THET8 2 ARIAGVEIPRNKRVDVALTYIYGIGKARAKEALEKTGINPATRVKDLTEAEVVRLREYVENTWKLEGELRAEVAANIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRKGPRKTVAGKKKAPRK 126
SCOP domains d1mj1p_ P: 70S ribosome functional complex SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ............................................................................................................................. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) --RIBOSOMAL_S13_2 PDB: P:3-111 UniProt: 4-112 -------------- PROSITE (1)
PROSITE (2) --------------------------------------------------------------------------------------RIBOSOMAL_S13_------------------------- PROSITE (2)
Transcript ----------------------------------------------------------------------------------------------------------------------------- Transcript
1mj1 P 1 ARIAGVEIPRNKRVDVALTYIYGIGKARAKEALEKTGINPATRVKDLTEAEVVRLREYVENTWKLEGELRAEVAANIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRKGPRKTVAGKKKAPRK 125
10 20 30 40 50 60 70 80 90 100 110 120
Chain Q from PDB Type:RNA Length:41
1mj1 Q 1 GGGGGGCUCUUCCUAGUACGAGAGGACCGGAAGGGACGCAC 41
10 20 30 40
Chain R from PDB Type:RNA Length:27
1mj1 R 1 GCGGCCGUAACUAUAACGGUCCUAAGG 27
10 20
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(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |