Chain A from PDB Type:PROTEIN Length:151
aligned with POLS_SINDV | P03316 from UniProtKB/Swiss-Prot Length:1245
Alignment length:151
123 133 143 153 163 173 183 193 203 213 223 233 243 253 263
POLS_SINDV 114 RLFDVKNEDGDVIGHALAMEGKVMKPLHVKGTIDHPVLSKLKFTKSSAYDMEFAQLPVNMRSEAFTYTSEHPEGFYNWHHGAVQYSGGRFTIPRGVGGRGDSGRPIMDNSGRVVAIVLGGADEGTRTALSVVTWNSKGKTIKTTPEGTEEW 264
SCOP domains d1ld4a_ A: Structural proteins SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeee.....eeeeeeee..eeeee.....ee...hhhhh..eeehhh.eeeee.hhhhh............eeeee..eeeeee..eeeee...........eee.....eeeeeeeeee...eeeeeeeee.....eeee........ Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ALPHAVIRUS_CP PDB: A:1114-1264 UniProt: 114-264 PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1ld4 A 1114 RLFDVKNEDGDVIGHALAMEGKVMKPLHVKGTIDHPVLSKLKFTKSSAYDMEFAQLPVNMRSEAFTYTSEHPEGFYNWHHGAVQYSGGRFTIPRGVGGRGDSGRPIMDNSGRVVAIVLGGADEGTRTALSVVTWNSKGKTIKTTPEGTEEW 1264
1123 1133 1143 1153 1163 1173 1183 1193 1203 1213 1223 1233 1243 1253 1263
Chain B from PDB Type:PROTEIN Length:151
aligned with POLS_SINDV | P03316 from UniProtKB/Swiss-Prot Length:1245
Alignment length:151
123 133 143 153 163 173 183 193 203 213 223 233 243 253 263
POLS_SINDV 114 RLFDVKNEDGDVIGHALAMEGKVMKPLHVKGTIDHPVLSKLKFTKSSAYDMEFAQLPVNMRSEAFTYTSEHPEGFYNWHHGAVQYSGGRFTIPRGVGGRGDSGRPIMDNSGRVVAIVLGGADEGTRTALSVVTWNSKGKTIKTTPEGTEEW 264
SCOP domains d1ld4b_ B: Structural proteins SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeee.....eeeeeeee..eeeee.....ee...hhhhh..eeehhh.eeeee.hhhhh............eeeee..eeeeee..eeeee...........eee.....eeeeeeeeee...eeeeeeeee.....eeee........ Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ALPHAVIRUS_CP PDB: B:4114-4264 UniProt: 114-264 PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1ld4 B 4114 RLFDVKNEDGDVIGHALAMEGKVMKPLHVKGTIDHPVLSKLKFTKSSAYDMEFAQLPVNMRSEAFTYTSEHPEGFYNWHHGAVQYSGGRFTIPRGVGGRGDSGRPIMDNSGRVVAIVLGGADEGTRTALSVVTWNSKGKTIKTTPEGTEEW 4264
4123 4133 4143 4153 4163 4173 4183 4193 4203 4213 4223 4233 4243 4253 4263
Chain C from PDB Type:PROTEIN Length:151
aligned with POLS_SINDV | P03316 from UniProtKB/Swiss-Prot Length:1245
Alignment length:151
123 133 143 153 163 173 183 193 203 213 223 233 243 253 263
POLS_SINDV 114 RLFDVKNEDGDVIGHALAMEGKVMKPLHVKGTIDHPVLSKLKFTKSSAYDMEFAQLPVNMRSEAFTYTSEHPEGFYNWHHGAVQYSGGRFTIPRGVGGRGDSGRPIMDNSGRVVAIVLGGADEGTRTALSVVTWNSKGKTIKTTPEGTEEW 264
SCOP domains d1ld4c_ C: Structural proteins SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeee.....eeeeeeee..eeeee.....ee...hhhhh..eeehhh.eeeee.hhhhh............eeeee..eeeeee..eeeee...........eee.....eeeeeeeeee...eeeeeeeee.....eeee........ Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ALPHAVIRUS_CP PDB: C:5114-5264 UniProt: 114-264 PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1ld4 C 5114 RLFDVKNEDGDVIGHALAMEGKVMKPLHVKGTIDHPVLSKLKFTKSSAYDMEFAQLPVNMRSEAFTYTSEHPEGFYNWHHGAVQYSGGRFTIPRGVGGRGDSGRPIMDNSGRVVAIVLGGADEGTRTALSVVTWNSKGKTIKTTPEGTEEW 5264
5123 5133 5143 5153 5163 5173 5183 5193 5203 5213 5223 5233 5243 5253 5263
Chain D from PDB Type:PROTEIN Length:151
aligned with POLS_SINDV | P03316 from UniProtKB/Swiss-Prot Length:1245
Alignment length:151
123 133 143 153 163 173 183 193 203 213 223 233 243 253 263
POLS_SINDV 114 RLFDVKNEDGDVIGHALAMEGKVMKPLHVKGTIDHPVLSKLKFTKSSAYDMEFAQLPVNMRSEAFTYTSEHPEGFYNWHHGAVQYSGGRFTIPRGVGGRGDSGRPIMDNSGRVVAIVLGGADEGTRTALSVVTWNSKGKTIKTTPEGTEEW 264
SCOP domains d1ld4d_ D: Structural proteins SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains (1) Peptidase_S3-1ld4D01 D:6114-6264 Pfam domains (1)
Pfam domains (2) Peptidase_S3-1ld4D02 D:6114-6264 Pfam domains (2)
Pfam domains (3) Peptidase_S3-1ld4D03 D:6114-6264 Pfam domains (3)
Pfam domains (4) Peptidase_S3-1ld4D04 D:6114-6264 Pfam domains (4)
Sec.struct. author .eeeee.....eeeeeeee..eeeee.....ee...hhhhh..eeehhh.eeeee.hhhhh............eeeee..eeeeee..eeeee...........eee.....eeeeeeeeee...eeeeeeeee.....eeee........ Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ALPHAVIRUS_CP PDB: D:6114-6264 UniProt: 114-264 PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1ld4 D 6114 RLFDVKNEDGDVIGHALAMEGKVMKPLHVKGTIDHPVLSKLKFTKSSAYDMEFAQLPVNMRSEAFTYTSEHPEGFYNWHHGAVQYSGGRFTIPRGVGGRGDSGRPIMDNSGRVVAIVLGGADEGTRTALSVVTWNSKGKTIKTTPEGTEEW 6264
6123 6133 6143 6153 6163 6173 6183 6193 6203 6213 6223 6233 6243 6253 6263
Chain E from PDB Type:PROTEIN Length:28
aligned with GCN4_YEAST | P03069 from UniProtKB/Swiss-Prot Length:281
Alignment length:28
259 269
GCN4_YEAST 250 MKQLEDKVEELLSKNYHLENEVARLKKL 277
SCOP domains d1ld4e_ E: SCOP domains
CATH domains ---------------------------- CATH domains
Pfam domains ---------------------------- Pfam domains
Sec.struct. author ............................ Sec.struct. author
SAPs(SNPs) ---------------------------- SAPs(SNPs)
PROSITE ---------------------------- PROSITE
Transcript 1 Exon 1.1 PDB: E:1150-1177 Transcript 1
1ld4 E 1150 MKQLEDKVEELLSKNYHLENEVARLKKL 1177
1159 1169
Chain F from PDB Type:PROTEIN Length:28
aligned with GCN4_YEAST | P03069 from UniProtKB/Swiss-Prot Length:281
Alignment length:28
259 269
GCN4_YEAST 250 MKQLEDKVEELLSKNYHLENEVARLKKL 277
SCOP domains d1ld4f_ F: SCOP domains
CATH domains ---------------------------- CATH domains
Pfam domains ---------------------------- Pfam domains
Sec.struct. author ............................ Sec.struct. author
SAPs(SNPs) ---------------------------- SAPs(SNPs)
PROSITE ---------------------------- PROSITE
Transcript 1 Exon 1.1 PDB: F:1250-1277 Transcript 1
1ld4 F 1250 MKQLEDKVEELLSKNYHLENEVARLKKL 1277
1259 1269
Chain G from PDB Type:PROTEIN Length:28
aligned with GCN4_YEAST | P03069 from UniProtKB/Swiss-Prot Length:281
Alignment length:28
259 269
GCN4_YEAST 250 MKQLEDKVEELLSKNYHLENEVARLKKL 277
SCOP domains d1ld4g_ G: SCOP domains
CATH domains ---------------------------- CATH domains
Pfam domains ---------------------------- Pfam domains
Sec.struct. author ............................ Sec.struct. author
SAPs(SNPs) ---------------------------- SAPs(SNPs)
PROSITE ---------------------------- PROSITE
Transcript 1 Exon 1.1 PDB: G:4150-4177 Transcript 1
1ld4 G 4150 MKQLEDKVEELLSKNYHLENEVARLKKL 4177
4159 4169
Chain H from PDB Type:PROTEIN Length:28
aligned with GCN4_YEAST | P03069 from UniProtKB/Swiss-Prot Length:281
Alignment length:28
259 269
GCN4_YEAST 250 MKQLEDKVEELLSKNYHLENEVARLKKL 277
SCOP domains d1ld4h_ H: SCOP domains
CATH domains ---------------------------- CATH domains
Pfam domains ---------------------------- Pfam domains
Sec.struct. author ............................ Sec.struct. author
SAPs(SNPs) ---------------------------- SAPs(SNPs)
PROSITE ---------------------------- PROSITE
Transcript 1 Exon 1.1 PDB: H:4250-4277 Transcript 1
1ld4 H 4250 MKQLEDKVEELLSKNYHLENEVARLKKL 4277
4259 4269
Chain I from PDB Type:PROTEIN Length:28
aligned with GCN4_YEAST | P03069 from UniProtKB/Swiss-Prot Length:281
Alignment length:28
259 269
GCN4_YEAST 250 MKQLEDKVEELLSKNYHLENEVARLKKL 277
SCOP domains d1ld4i_ I: SCOP domains
CATH domains ---------------------------- CATH domains
Pfam domains ---------------------------- Pfam domains
Sec.struct. author ............................ Sec.struct. author
SAPs(SNPs) ---------------------------- SAPs(SNPs)
PROSITE ---------------------------- PROSITE
Transcript 1 Exon 1.1 PDB: I:5150-5177 Transcript 1
1ld4 I 5150 MKQLEDKVEELLSKNYHLENEVARLKKL 5177
5159 5169
Chain J from PDB Type:PROTEIN Length:28
aligned with GCN4_YEAST | P03069 from UniProtKB/Swiss-Prot Length:281
Alignment length:28
259 269
GCN4_YEAST 250 MKQLEDKVEELLSKNYHLENEVARLKKL 277
SCOP domains d1ld4j_ J: SCOP domains
CATH domains ---------------------------- CATH domains
Pfam domains ---------------------------- Pfam domains
Sec.struct. author ............................ Sec.struct. author
SAPs(SNPs) ---------------------------- SAPs(SNPs)
PROSITE ---------------------------- PROSITE
Transcript 1 Exon 1.1 PDB: J:5250-5277 Transcript 1
1ld4 J 5250 MKQLEDKVEELLSKNYHLENEVARLKKL 5277
5259 5269
Chain K from PDB Type:PROTEIN Length:28
aligned with GCN4_YEAST | P03069 from UniProtKB/Swiss-Prot Length:281
Alignment length:28
259 269
GCN4_YEAST 250 MKQLEDKVEELLSKNYHLENEVARLKKL 277
SCOP domains d1ld4k_ K: SCOP domains
CATH domains ---------------------------- CATH domains
Pfam domains ---------------------------- Pfam domains
Sec.struct. author ............................ Sec.struct. author
SAPs(SNPs) ---------------------------- SAPs(SNPs)
PROSITE ---------------------------- PROSITE
Transcript 1 Exon 1.1 PDB: K:6150-6177 Transcript 1
1ld4 K 6150 MKQLEDKVEELLSKNYHLENEVARLKKL 6177
6159 6169
Chain L from PDB Type:PROTEIN Length:28
aligned with GCN4_YEAST | P03069 from UniProtKB/Swiss-Prot Length:281
Alignment length:28
259 269
GCN4_YEAST 250 MKQLEDKVEELLSKNYHLENEVARLKKL 277
SCOP domains d1ld4l_ L: SCOP domains
CATH domains ---------------------------- CATH domains
Pfam domains ---------------------------- Pfam domains
Sec.struct. author ............................ Sec.struct. author
SAPs(SNPs) ---------------------------- SAPs(SNPs)
PROSITE ---------------------------- PROSITE
Transcript 1 Exon 1.1 PDB: L:6250-6277 Transcript 1
1ld4 L 6250 MKQLEDKVEELLSKNYHLENEVARLKKL 6277
6259 6269
Chain M from PDB Type:PROTEIN Length:369
aligned with POLS_SINDV | P03316 from UniProtKB/Swiss-Prot Length:1245
Alignment length:380
816 826 836 846 856 866 876 886 896 906 916 926 936 946 956 966 976 986 996 1006 1016 1026 1036 1046 1056 1066 1076 1086 1096 1106 1116 1126 1136 1146 1156 1166 1176 1186
POLS_SINDV 807 YEHATTVPNVPQIPYKALVERAGYAPLNLEITVMSSEVLPSTNQEYITCKFTTVVPSPKIKCCGSLECQPAAHADYTCKVFGGVYPFMWGGAQCFCDSENSQMSEAYVELSADCASDHAQAIKVHTAAMKVGLRIVYGNTTSFLDVYVNGVTPGTSKDLKVIAGPISASFTPFDHKVVIHRGLVYNYDFPEYGAMKPGAFGDIQATSLTSKDLIASTDIRLLKPSAKNVHVPYTQASSGFEMWKNNSGRPLQETAPFGCKIAVNPLRAVDCSYGNIPISIDIPNAAFIRTSDAPLVSTVKCEVSECTYSADFGGMATLQYVSDREGQCPVHSHSSTATLQESTVHVLEKGAVTVHFSTASPQANFIVSLCGKKTTCNAEC 1186
SCOP domains d1ld4m_ M: Structural proteins SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....eeee......eeee.........eeeeeeeeeee.....eeeee..eeee..........................ee..................ee....eeee........eeee.......eeeeeee....eee..ee.............ee..............eeee..eeee.................................ee...........ee....................hhhhh........ee.....eeeeee.............................-----...ee..........................------.ee.......................... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1ld4 M 1001 YEHATTVPNVPQIPYKALVERAGYAPLNLEITVMSSEVLPSTNQEYITCKFTTVVPSPKIKCCGSLECQPAAHADYTCKVFGGVYPFMWGGAQCFCDSENSQMSEAYVELSADCASDHAQAIKVHTAAMKVGLRIVYGNTTSFLDVYVNGVTPGTSKDLKVIAGPISASFTPFDHKVVIHRGLVYNYDFPEYGAMKPGAFGDIQATSLTSKDLIASTDIRLLKPSAKNVHVPYTQASSGFEMWKNNSGRPLQETAPFGCKIAVNPLRAVDCSYGNIPISIDIPNAAFIRTSDAPLVSTVKCEVSECTYS-----MATLQYVSDREGQCPVHSHSSTATLQESTVH------VTVHFSTASPQANFIVSLCGKKTTCNAEC 1380
1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 |- | 1320 1330 1340 | - | 1360 1370 1380
1309 1315 1345 1352
Chain N from PDB Type:PROTEIN Length:369
aligned with POLS_SINDV | P03316 from UniProtKB/Swiss-Prot Length:1245
Alignment length:380
816 826 836 846 856 866 876 886 896 906 916 926 936 946 956 966 976 986 996 1006 1016 1026 1036 1046 1056 1066 1076 1086 1096 1106 1116 1126 1136 1146 1156 1166 1176 1186
POLS_SINDV 807 YEHATTVPNVPQIPYKALVERAGYAPLNLEITVMSSEVLPSTNQEYITCKFTTVVPSPKIKCCGSLECQPAAHADYTCKVFGGVYPFMWGGAQCFCDSENSQMSEAYVELSADCASDHAQAIKVHTAAMKVGLRIVYGNTTSFLDVYVNGVTPGTSKDLKVIAGPISASFTPFDHKVVIHRGLVYNYDFPEYGAMKPGAFGDIQATSLTSKDLIASTDIRLLKPSAKNVHVPYTQASSGFEMWKNNSGRPLQETAPFGCKIAVNPLRAVDCSYGNIPISIDIPNAAFIRTSDAPLVSTVKCEVSECTYSADFGGMATLQYVSDREGQCPVHSHSSTATLQESTVHVLEKGAVTVHFSTASPQANFIVSLCGKKTTCNAEC 1186
SCOP domains d1ld4n_ N: Structural proteins SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....eeee......eeee.........eeeeeeeeeee.....eeeee..eeee..........................ee..................ee....eeee........eeee.......eeeeeee....eee..ee.............ee..............eeee..eeee.................................ee...........ee....................hhhhh........ee.....eeeeee.............................-----...ee..........................------.ee.......................... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1ld4 N 4001 YEHATTVPNVPQIPYKALVERAGYAPLNLEITVMSSEVLPSTNQEYITCKFTTVVPSPKIKCCGSLECQPAAHADYTCKVFGGVYPFMWGGAQCFCDSENSQMSEAYVELSADCASDHAQAIKVHTAAMKVGLRIVYGNTTSFLDVYVNGVTPGTSKDLKVIAGPISASFTPFDHKVVIHRGLVYNYDFPEYGAMKPGAFGDIQATSLTSKDLIASTDIRLLKPSAKNVHVPYTQASSGFEMWKNNSGRPLQETAPFGCKIAVNPLRAVDCSYGNIPISIDIPNAAFIRTSDAPLVSTVKCEVSECTYS-----MATLQYVSDREGQCPVHSHSSTATLQESTVH------VTVHFSTASPQANFIVSLCGKKTTCNAEC 4380
4010 4020 4030 4040 4050 4060 4070 4080 4090 4100 4110 4120 4130 4140 4150 4160 4170 4180 4190 4200 4210 4220 4230 4240 4250 4260 4270 4280 4290 4300 |- | 4320 4330 4340 | - | 4360 4370 4380
4309 4315 4345 4352
Chain O from PDB Type:PROTEIN Length:369
aligned with POLS_SINDV | P03316 from UniProtKB/Swiss-Prot Length:1245
Alignment length:380
816 826 836 846 856 866 876 886 896 906 916 926 936 946 956 966 976 986 996 1006 1016 1026 1036 1046 1056 1066 1076 1086 1096 1106 1116 1126 1136 1146 1156 1166 1176 1186
POLS_SINDV 807 YEHATTVPNVPQIPYKALVERAGYAPLNLEITVMSSEVLPSTNQEYITCKFTTVVPSPKIKCCGSLECQPAAHADYTCKVFGGVYPFMWGGAQCFCDSENSQMSEAYVELSADCASDHAQAIKVHTAAMKVGLRIVYGNTTSFLDVYVNGVTPGTSKDLKVIAGPISASFTPFDHKVVIHRGLVYNYDFPEYGAMKPGAFGDIQATSLTSKDLIASTDIRLLKPSAKNVHVPYTQASSGFEMWKNNSGRPLQETAPFGCKIAVNPLRAVDCSYGNIPISIDIPNAAFIRTSDAPLVSTVKCEVSECTYSADFGGMATLQYVSDREGQCPVHSHSSTATLQESTVHVLEKGAVTVHFSTASPQANFIVSLCGKKTTCNAEC 1186
SCOP domains d1ld4o_ O: Structural proteins SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....eeee......eeee.........eeeeeeeeeee.....eeeee..eeee..........................ee..................ee....eeee........eeee.......eeeeeee....eee..ee.............ee..............eeee..eeee.................................ee...........ee....................hhhhh........ee.....eeeeee.............................-----...ee..........................------.ee.......................... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1ld4 O 5001 YEHATTVPNVPQIPYKALVERAGYAPLNLEITVMSSEVLPSTNQEYITCKFTTVVPSPKIKCCGSLECQPAAHADYTCKVFGGVYPFMWGGAQCFCDSENSQMSEAYVELSADCASDHAQAIKVHTAAMKVGLRIVYGNTTSFLDVYVNGVTPGTSKDLKVIAGPISASFTPFDHKVVIHRGLVYNYDFPEYGAMKPGAFGDIQATSLTSKDLIASTDIRLLKPSAKNVHVPYTQASSGFEMWKNNSGRPLQETAPFGCKIAVNPLRAVDCSYGNIPISIDIPNAAFIRTSDAPLVSTVKCEVSECTYS-----MATLQYVSDREGQCPVHSHSSTATLQESTVH------VTVHFSTASPQANFIVSLCGKKTTCNAEC 5380
5010 5020 5030 5040 5050 5060 5070 5080 5090 5100 5110 5120 5130 5140 5150 5160 5170 5180 5190 5200 5210 5220 5230 5240 5250 5260 5270 5280 5290 5300 |- | 5320 5330 5340 | - | 5360 5370 5380
5309 5315 5345 5352
Chain P from PDB Type:PROTEIN Length:369
aligned with POLS_SINDV | P03316 from UniProtKB/Swiss-Prot Length:1245
Alignment length:380
816 826 836 846 856 866 876 886 896 906 916 926 936 946 956 966 976 986 996 1006 1016 1026 1036 1046 1056 1066 1076 1086 1096 1106 1116 1126 1136 1146 1156 1166 1176 1186
POLS_SINDV 807 YEHATTVPNVPQIPYKALVERAGYAPLNLEITVMSSEVLPSTNQEYITCKFTTVVPSPKIKCCGSLECQPAAHADYTCKVFGGVYPFMWGGAQCFCDSENSQMSEAYVELSADCASDHAQAIKVHTAAMKVGLRIVYGNTTSFLDVYVNGVTPGTSKDLKVIAGPISASFTPFDHKVVIHRGLVYNYDFPEYGAMKPGAFGDIQATSLTSKDLIASTDIRLLKPSAKNVHVPYTQASSGFEMWKNNSGRPLQETAPFGCKIAVNPLRAVDCSYGNIPISIDIPNAAFIRTSDAPLVSTVKCEVSECTYSADFGGMATLQYVSDREGQCPVHSHSSTATLQESTVHVLEKGAVTVHFSTASPQANFIVSLCGKKTTCNAEC 1186
SCOP domains d1ld4p_ P: Structural proteins SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains (1) Alpha_E1_glycop-1ld4P01 P:6001-6380 Pfam domains (1)
Pfam domains (2) Alpha_E1_glycop-1ld4P02 P:6001-6380 Pfam domains (2)
Pfam domains (3) Alpha_E1_glycop-1ld4P03 P:6001-6380 Pfam domains (3)
Pfam domains (4) Alpha_E1_glycop-1ld4P04 P:6001-6380 Pfam domains (4)
Sec.struct. author ....eeee......eeee.........eeeeeeeeeee.....eeeee..eeee..........................ee..................ee....eeee........eeee.......eeeeeee....eee..ee.............ee..............eeee..eeee.................................ee...........ee....................hhhhh........ee.....eeeeee.............................-----...ee..........................------.ee.......................... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------V--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1ld4 P 6001 YEHATTVPNVPQIPYKALVERAGYAPLNLEITVMSSEVLPSTNQEYITCKFTTVVPSPKIKCCGSLECQPAAHADYTCKVFGGVYPFMWGGAQCFCDSENSQMSEAYVELSADCASDHAQAIKVHTAAMKVGLRIVYGNTTSFLDVYVNGVTPGTSKDLKVIAGPISASFTPFDHKVVIHRGLVYNYDFPEYGAMKPGAFGDIQATSLTSKDLIASTDIRLLKPSAKNVHVPYTQASSGFEMWKNNSGRPLQETAPFGCKIAVNPLRAVDCSYGNIPISIDIPNAAFIRTSDAPLVSTVKCEVSECTYS-----MATLQYVSDREGQCPVHSHSSTATLQESTVH------VTVHFSTASPQANFIVSLCGKKTTCNAEC 6380
6010 6020 6030 6040 6050 6060 6070 6080 6090 6100 6110 6120 6130 6140 6150 6160 6170 6180 6190 6200 6210 6220 6230 6240 6250 6260 6270 6280 6290 6300 |- | 6320 6330 6340 | - | 6360 6370 6380
6309 6315 6345 6352
Legend: |
|
→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
|
|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
|
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
|
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |