Chain A from PDB Type:PROTEIN Length:58
aligned with Q54181_STRSG | Q54181 from UniProtKB/TrEMBL Length:185
Alignment length:58
68 78 88 98 108
Q54181_STRSG 59 VTTYKLVINGKTLKGETTTEAVDAATAEKVFKQYANDNGVDGEWTYDDATKTFTVTEK 116
SCOP domains d1uwxa_ A: automated matches SCOP domains
CATH domains 1uwxA00 A:5-62 [code=3.10.20.10, no name defined] CATH domains
Pfam domains ---------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeeee...eeeeeeeee.hhhhhhhhhhhhhhhh....eeeee....eeeee.. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------- Transcript
1uwx A 5 VTTYKLVINGKTLKGETTTKAVDAATAEKVFKQYANDNGVDGEWTYDDATKTFTVTEK 62
14 24 34 44 54
Chain A from PDB Type:PROTEIN Length:58
aligned with SPG2_STRSG | P19909 from UniProtKB/Swiss-Prot Length:593
Alignment length:58
380 390 400 410 420
SPG2_STRSG 371 VTTYKLVINGKTLKGETTTEAVDAATAEKVFKQYANDNGVDGEWTYDDATKTFTVTEK 428
SCOP domains d1uwxa_ A: automated matches SCOP domains
CATH domains 1uwxA00 A:5-62 [code=3.10.20.10, no name defined] CATH domains
Pfam domains ---------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeeee...eeeeeeeee.hhhhhhhhhhhhhhhh....eeeee....eeeee.. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------- Transcript
1uwx A 5 VTTYKLVINGKTLKGETTTKAVDAATAEKVFKQYANDNGVDGEWTYDDATKTFTVTEK 62
14 24 34 44 54
Chain B from PDB Type:PROTEIN Length:60
aligned with Q54181_STRSG | Q54181 from UniProtKB/TrEMBL Length:185
Alignment length:60
68 78 88 98 108 118
Q54181_STRSG 59 VTTYKLVINGKTLKGETTTEAVDAATAEKVFKQYANDNGVDGEWTYDDATKTFTVTEKPE 118
SCOP domains d1uwxb_ B: automated matches SCOP domains
CATH domains 1uwxB00 B:5-64 [code=3.10.20.10, no name defined] CATH domains
Pfam domains (1) --IgG_binding_B-1uwxB01 B:7-61 --- Pfam domains (1)
Pfam domains (2) --IgG_binding_B-1uwxB02 B:7-61 --- Pfam domains (2)
Sec.struct. author .eeeeeeee...eeeeeeeee.hhhhhhhhhhhhhhhh....eeeee....eeeee.... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------ Transcript
1uwx B 5 VTTYKLVINGKTLKGETTTKAVDAATAEKVFKQYANDNGVDGEWTYDDATKTFTVTEKPE 64
14 24 34 44 54 64
Chain B from PDB Type:PROTEIN Length:60
aligned with SPG2_STRSG | P19909 from UniProtKB/Swiss-Prot Length:593
Alignment length:60
380 390 400 410 420 430
SPG2_STRSG 371 VTTYKLVINGKTLKGETTTEAVDAATAEKVFKQYANDNGVDGEWTYDDATKTFTVTEKPE 430
SCOP domains d1uwxb_ B: automated matches SCOP domains
CATH domains 1uwxB00 B:5-64 [code=3.10.20.10, no name defined] CATH domains
Pfam domains (1) --IgG_binding_B-1uwxB01 B:7-61 --- Pfam domains (1)
Pfam domains (2) --IgG_binding_B-1uwxB02 B:7-61 --- Pfam domains (2)
Sec.struct. author .eeeeeeee...eeeeeeeee.hhhhhhhhhhhhhhhh....eeeee....eeeee.... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------ Transcript
1uwx B 5 VTTYKLVINGKTLKGETTTKAVDAATAEKVFKQYANDNGVDGEWTYDDATKTFTVTEKPE 64
14 24 34 44 54 64
Chain H from PDB Type:PROTEIN Length:218
SCOP domains ---------------------------------------------------------------------------------------------------------------------------d1uwxh1 H:115-215 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma SCOP domains
CATH domains 1uwxH01 H:2-114 Immunoglobulins 1uwxH02 H:115-215 Immunoglobulins CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeee...eee.....eeeeeeee..hhhhheeeeeee.....eeeeeee......eee.hhhh..eeeeeehhh.eeeeee...hhhhheeeeeeeee........eeeee...eeeee........eeeee....eeeeeeeeeee.....eeee.hhh....eee...ee....eeeeeeeeee.........eeeeeehhhheeeeee...... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1uwx H 2 VQLQQSGPELKKPGETVKLSCKASGYTFTNFGLNWMKQAPGKGLKWMGWINTYTGESTYADDFKGRFAFSLETSASTAYLQINNVKNEDTATYFCARGFYYYGSRYFYFDYWGQGTTLTVSSAKTTAPSVYPLAPVSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRGP 215
11 21 31 41 51 | 60 70 80 ||| 87 97 ||||101 111 121 ||137 147 157 167 177 187 197 207
52A 82A|| 100A||||| 127|
82B| 100B|||| 134
82C 100C|||
100D||
100E|
100F
Chain K from PDB Type:PROTEIN Length:212
aligned with IGKC_MOUSE | P01837 from UniProtKB/Swiss-Prot Length:106
Alignment length:212
1
- - - - - - - - - - |2 12 22 32 42 52 62 72 82 92 102
IGKC_MOUSE - ------------------------------------------------------------------------------------------------------------ADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN 104
SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains 1uwxK01 K:3-109 Immunoglobulins 1uwxK02 K:110-213 Immunoglobulins CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...ee....eeee.....eeeeeee.......eeeeee......eeeee...ee.......eeeeee..eeeeee...hhhhh.eeeeee...........eeeee.......eeeee..hhhhhhh.eeeeeeeeeee.....eeeeee..eee...eeeee.........eeeeeeeeeehhhhh...eeeeeee.......eeeeee.. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IG_MHC -------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1uwx K 3 GIVMTQTPASQSASLGESVTITCLASQTIGTWLAWYQQKPGKSPQLLIYAATSLADGVPSRFSGSGSGTKFSFKISSLQAEDFVSYYCQQLSSTPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGKERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN 213
12 22 32 42 52 62 72 82 92 || |102 | 111 121 131 141 151 161 171 181 191 201 211
95A| || 106A
95B ||
97|
100
Chain L from PDB Type:PROTEIN Length:212
aligned with IGKC_MOUSE | P01837 from UniProtKB/Swiss-Prot Length:106
Alignment length:212
1
- - - - - - - - - - |2 12 22 32 42 52 62 72 82 92 102
IGKC_MOUSE - ------------------------------------------------------------------------------------------------------------ADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN 104
SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains 1uwxL01 L:3-109 Immunoglobulins 1uwxL02 L:110-213 Immunoglobulins CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...ee....eeee.....eeeeeee.......eeeeee......eeeee...ee.......eeeeee..eeeeee...hhhhh.eeeeee...........eeeee.......eeeee..hhhhhhh.eeeeeeeeeee.....eeeeee..eee...eeeee.........eeeeeeeeeehhhhh...eeeeeee.......eeeeee.. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IG_MHC -------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1uwx L 3 GIVMTQTPASQSASLGESVTITCLASQTIGTWLAWYQQKPGKSPQLLIYAATSLADGVPSRFSGSGSGTKFSFKISSLQAEDFVSYYCQQLSSTPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGKERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN 213
12 22 32 42 52 62 72 82 92 || |102 | 111 121 131 141 151 161 171 181 191 201 211
95A| || 106A
95B ||
97|
100
Chain M from PDB Type:PROTEIN Length:218
SCOP domains ---------------------------------------------------------------------------------------------------------------------------d1uwxm1 M:115-215 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma SCOP domains
CATH domains 1uwxM01 M:2-114 Immunoglobulins 1uwxM02 M:115-215 Immunoglobulins CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeee...eee.....eeeeeeee..hhhhheeeeeee......eeeeee......eee.hhhh..eeeeeehhh.eeeeee...hhhhheeeeeeeee........eeeee...eeeee........eeeee....eeeeeeeeeee.....eeee.hhh....eee...ee....eeeeeeeeee.........eeeeeehhhheeeeee...... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1uwx M 2 VQLQQSGPELKKPGETVKLSCKASGYTFTNFGLNWMKQAPGKGLKWMGWINTYTGESTYADDFKGRFAFSLETSASTAYLQINNVKNEDTATYFCARGFYYYGSRYFYFDYWGQGTTLTVSSAKTTAPSVYPLAPVSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRGP 215
11 21 31 41 51 | 60 70 80 ||| 87 97 ||||101 111 121 ||137 147 157 167 177 187 197 207
52A 82A|| 100A||||| 127|
82B| 100B|||| 134
82C 100C|||
100D||
100E|
100F
Chain P from PDB Type:PROTEIN Length:13
aligned with Q51220_NEIME | Q51220 from UniProtKB/TrEMBL Length:50
Alignment length:13
25
Q51220_NEIME 16 HFVQQTPKSQPTL 28
SCOP domains ------------- SCOP domains
CATH domains ------------- CATH domains
Pfam domains ------------- Pfam domains
Sec.struct. author ............. Sec.struct. author
SAPs(SNPs) ------------- SAPs(SNPs)
PROSITE ------------- PROSITE
Transcript ------------- Transcript
1uwx P 1 HFVQQTPKSQPTL 13
10
Chain P from PDB Type:PROTEIN Length:13
aligned with Q9JPT2_NEIME | Q9JPT2 from UniProtKB/TrEMBL Length:385
Alignment length:13
198
Q9JPT2_NEIME 189 HFVQQTPKSQPTL 201
SCOP domains ------------- SCOP domains
CATH domains ------------- CATH domains
Pfam domains ------------- Pfam domains
Sec.struct. author ............. Sec.struct. author
SAPs(SNPs) ------------- SAPs(SNPs)
PROSITE ------------- PROSITE
Transcript ------------- Transcript
1uwx P 1 HFVQQTPKSQPTL 13
10
Chain Q from PDB Type:PROTEIN Length:13
aligned with Q51220_NEIME | Q51220 from UniProtKB/TrEMBL Length:50
Alignment length:13
25
Q51220_NEIME 16 HFVQQTPKSQPTL 28
SCOP domains ------------- SCOP domains
CATH domains ------------- CATH domains
Pfam domains (1) Porin_1-1uwxQ Pfam domains (1)
Pfam domains (2) Porin_1-1uwxQ Pfam domains (2)
Sec.struct. author ............. Sec.struct. author
SAPs(SNPs) ------------- SAPs(SNPs)
PROSITE ------------- PROSITE
Transcript ------------- Transcript
1uwx Q 1 HFVQQTPKSQPTL 13
10
Chain Q from PDB Type:PROTEIN Length:13
aligned with Q9JPT2_NEIME | Q9JPT2 from UniProtKB/TrEMBL Length:385
Alignment length:13
198
Q9JPT2_NEIME 189 HFVQQTPKSQPTL 201
SCOP domains ------------- SCOP domains
CATH domains ------------- CATH domains
Pfam domains (1) Porin_1-1uwxQ Pfam domains (1)
Pfam domains (2) Porin_1-1uwxQ Pfam domains (2)
Sec.struct. author ............. Sec.struct. author
SAPs(SNPs) ------------- SAPs(SNPs)
PROSITE ------------- PROSITE
Transcript ------------- Transcript
1uwx Q 1 HFVQQTPKSQPTL 13
10
Legend: |
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→ Mismatch |
(orange background) |
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(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |