Chain H from PDB Type:PROTEIN Length:220
SCOP domains d1lo0h1 H:1-119 Immunoglobulin heavy chain variable domain, VH d1lo0h2 H:120-221 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma SCOP domains
CATH domains 1lo0H01 H:1-119 Immunoglobulins 1lo0H02 H:120-218 Immunoglobulins --- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeee...ee.....eeeeeeee.......eeeeeee.....eeeeeee.....ee.........eeeee....eeeeee...hhhhheeeeeeeee............eeeee........eeeee..........eeeeeeeeeee.....eeee.hhh....eee...ee....eeeeeeeeee.hhh.....eeeeeehhhheeeeee...... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1lo0 H 1 EVKLVESGGGLVKPGGSLKLSCAASGFSFRNYGMSWVRQTPEKRLEWVASISYGGLIYYPDSIKGRFTISRDIAQNILYLQMSSLRSEDTAMYHCIRGDSFLVWFTFWGQGTLVTVSAAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTQVDKKIEPRGP 221
10 20 30 40 50 || 63 73 83 93 103 || 111 121 131 141 151 161 171 181 191 201 211 221
53| 104A|
57 104B
Chain L from PDB Type:PROTEIN Length:219
aligned with A2NHM3_MOUSE | A2NHM3 from UniProtKB/TrEMBL Length:219
Alignment length:219
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210
A2NHM3_MOUSE 1 DVLMTQTPLSLPVSLGDQASISCRSSQSIVHTNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC 219
SCOP domains d1lo0l1 L:1-112 Immunoglobulin light chain kappa variable domain, VL-kappa d1lo0l2 L:113-220 Immunoglobulin light chain kappa constant domain, CL-kappa SCOP domains
CATH domains 1lo0L01 L:1-113 Immunoglobulins 1lo0L02 L:114-216 Immunoglobulins --- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeee..eeee.....eeeeeee............eeeeee.....eeeeee...ee.......eeeeee..eeeeee...hhhhheeeeeee......ee...eeeee.......eeeee..hhhhhhh.eeeeeeeeeee.....eeeeee..ee....eeeee.........eeeeeeeeeehhhhhh..eeeeeee.......eeeeee.... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1lo0 L 1 DVLMTQTPLSLPVSLGDQVSIFCTSSQTIVHTNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVETEDLGIYYCFQGSHFPLAFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC 220
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 ||
218|
220
Chain L from PDB Type:PROTEIN Length:219
aligned with IGKC_MOUSE | P01837 from UniProtKB/Swiss-Prot Length:106
Alignment length:219
1
- - - - - - - - - - - | 7 17 27 37 47 57 67 77 87 97
IGKC_MOUSE - -----------------------------------------------------------------------------------------------------------------ADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC 106
SCOP domains d1lo0l1 L:1-112 Immunoglobulin light chain kappa variable domain, VL-kappa d1lo0l2 L:113-220 Immunoglobulin light chain kappa constant domain, CL-kappa SCOP domains
CATH domains 1lo0L01 L:1-113 Immunoglobulins 1lo0L02 L:114-216 Immunoglobulins --- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeee..eeee.....eeeeeee............eeeeee.....eeeeee...ee.......eeeeee..eeeeee...hhhhheeeeeee......ee...eeeee.......eeeee..hhhhhhh.eeeeeeeeeee.....eeeeee..ee....eeeee.........eeeeeeeeeehhhhhh..eeeeeee.......eeeeee.... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IG_MHC ---------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1lo0 L 1 DVLMTQTPLSLPVSLGDQVSIFCTSSQTIVHTNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVETEDLGIYYCFQGSHFPLAFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC 220
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 ||
218|
220
Chain X from PDB Type:PROTEIN Length:219
aligned with A2NHM3_MOUSE | A2NHM3 from UniProtKB/TrEMBL Length:219
Alignment length:219
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210
A2NHM3_MOUSE 1 DVLMTQTPLSLPVSLGDQASISCRSSQSIVHTNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC 219
SCOP domains d1lo0x1 X:1-112 Immunoglobulin light chain kappa variable domain, VL-kappa d1lo0x2 X:113-220 Immunoglobulin light chain kappa constant domain, CL-kappa SCOP domains
CATH domains 1lo0X01 X:1-113 Immunoglobulins 1lo0X02 X:114-216 Immunoglobulins --- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeee..eeee.....eeeeeee............eeeeee.....eeeeee...ee.......eeeeee..eeeeee...hhhhheeeeeee......ee...eeeee.......eeeee..hhhhhhh.eeeeeeeeeee.....eeeeee..ee....eeeee.........eeeeeeeeeehhhhh...eeeeeee.......eeeeee.... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1lo0 X 1 DVLMTQTPLSLPVSLGDQVSIFCTSSQTIVHTNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVETEDLGIYYCFQGSHFPLAFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC 220
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 ||
218|
220
Chain X from PDB Type:PROTEIN Length:219
aligned with IGKC_MOUSE | P01837 from UniProtKB/Swiss-Prot Length:106
Alignment length:219
1
- - - - - - - - - - - | 7 17 27 37 47 57 67 77 87 97
IGKC_MOUSE - -----------------------------------------------------------------------------------------------------------------ADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC 106
SCOP domains d1lo0x1 X:1-112 Immunoglobulin light chain kappa variable domain, VL-kappa d1lo0x2 X:113-220 Immunoglobulin light chain kappa constant domain, CL-kappa SCOP domains
CATH domains 1lo0X01 X:1-113 Immunoglobulins 1lo0X02 X:114-216 Immunoglobulins --- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeee..eeee.....eeeeeee............eeeeee.....eeeeee...ee.......eeeeee..eeeeee...hhhhheeeeeee......ee...eeeee.......eeeee..hhhhhhh.eeeeeeeeeee.....eeeeee..ee....eeeee.........eeeeeeeeeehhhhh...eeeeeee.......eeeeee.... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IG_MHC ---------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1lo0 X 1 DVLMTQTPLSLPVSLGDQVSIFCTSSQTIVHTNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVETEDLGIYYCFQGSHFPLAFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC 220
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 ||
218|
220
Chain Y from PDB Type:PROTEIN Length:220
SCOP domains d1lo0y1 Y:1-119 Immunoglobulin heavy chain variable domain, VH d1lo0y2 Y:120-221 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma SCOP domains
CATH domains 1lo0Y01 Y:1-119 Immunoglobulins 1lo0Y02 Y:120-218 Immunoglobulins --- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeee...ee.....eeeeeeee.......eeeeeee.....eeeeeee.....ee........eeeeee....eeeeee...hhhhheeeeeeeee............eeeee........eeeee..........eeeeeeeeeee.....eeee.hhh....eee...ee....eeeeeeeeee.........eeeeeehhhheeeeee...... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1lo0 Y 1 EVKLVESGGGLVKPGGSLKLSCAASGFSFRNYGMSWVRQTPEKRLEWVASISYGGLIYYPDSIKGRFTISRDIAQNILYLQMSSLRSEDTAMYHCIRGDSFLVWFTFWGQGTLVTVSAAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTQVDKKIEPRGP 221
10 20 30 40 50 || 63 73 83 93 103 || 111 121 131 141 151 161 171 181 191 201 211 221
53| 104A|
57 104B
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |