Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asym./Biol. Unit
collapse expand < >
Image Asym./Biol. Unit
Asym./Biol. Unit  (Jmol Viewer)

(-) Description

Title :  CRYSTAL STRUCTURE OF THE BG505 SOSIP GP140 HIV-1 ENV TRIMER IN COMPLEX WITH THE BROADLY NEUTRALIZING FAB PGT122 AND SCFV NIH45-46
 
Authors :  J. -P. Julien, R. L. Stanfield, A. B. Ward, I. A. Wilson
Date :  18 Aug 15  (Deposition) - 17 Aug 16  (Release) - 07 Sep 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  4.40
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O
Keywords :  Hiv Env Glycoprotein; Broadly Neutralizing Antibodies; Immune System, Immune System (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. G. Jardine, D. Sok, J. P. Julien, B. Briney, A. Sarkar, C. H. Liang, E. A. Scherer, C. J. Henry Dunand, Y. Adachi, D. Diwanji, J. Hsueh, M. Jones, O. Kalyuzhniy, M. Kubitz, S. Spencer, M. Pauthner, K. L. Saye-Francisco, F. Sesterhenn, P. C. Wilson, D. M. Galloway, R. L. Stanfield, I. A. Wilson, D. R. Burton, W. R. Schief
Minimally Mutated Hiv-1 Broadly Neutralizing Antibodies To Guide Reductionist Vaccine Design.
Plos Pathog. V. 12 05815 2016
PubMed-ID: 27560183  |  Reference-DOI: 10.1371/JOURNAL.PPAT.1005815

(-) Compounds

Molecule 1 - ENVELOPE GLYCOPROTEIN GP120
    Chains: G, A, J
    Engineered: YES
    Expression System: HOMO SAPIENS
    Expression System Taxid: 9606
    Gene: ENV
    Organism Scientific: HUMAN IMMUNODEFICIENCY VIRUS 1
    Organism Taxid: 11676
 
Molecule 2 - ENVELOPE GLYCOPROTEIN GP41
    Chains: B, C, K
    Engineered: YES
    Expression System: HOMO SAPIENS
    Expression System Taxid: 9606
    Gene: ENV
    Organism Scientific: HUMAN IMMUNODEFICIENCY VIRUS 1
    Organism Taxid: 11676
 
Molecule 3 - PGT122 LIGHT CHAIN,IG LAMBDA-3 CHAIN C REGIONS
    Chains: L, E, M
    Engineered: YES
    Expression System: HOMO SAPIENS
    Expression System Taxid: 9606
    Gene: IGLC3
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
 
Molecule 4 - PGT122 HEAVY CHAIN,IGG H CHAIN
    Chains: H, F, N
    Engineered: YES
    Expression System: HOMO SAPIENS
    Expression System Taxid: 9606
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
 
Molecule 5 - NIH45-46 SINGLE CHAIN FV
    Chains: D, I, O
    Engineered: YES
    Expression System: HOMO SAPIENS
    Expression System Taxid: 9606
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606

 Structural Features

(-) Chains, Units

  123456789101112131415
Asymmetric/Biological Unit : ABCDEFGHIJKLMNO

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 219)

Asymmetric/Biological Unit (4, 219)
No.NameCountTypeFull Name
1BMA24Ligand/IonBETA-D-MANNOSE
2MAN90Ligand/IonALPHA-D-MANNOSE
3NAG102Ligand/IonN-ACETYL-D-GLUCOSAMINE
4PCA3Mod. Amino AcidPYROGLUTAMIC ACID

(-) Sites  (0, 0)

(no "Site" information available for 5D9Q)

(-) SS Bonds  (54, 54)

Asymmetric/Biological Unit
No.Residues
1A:54 -A:74
2A:119 -A:205
3A:126 -A:196
4A:131 -A:157
5A:218 -A:247
6A:228 -A:239
7A:296 -A:331
8A:378 -A:445
9A:385 -A:418
10A:501 -C:605
11B:598 -B:604
12C:598 -C:604
13D:22 -D:92
14D:32 -D:98
15D:223 -D:286
16E:23 -E:88
17E:135 -E:194
18F:22 -F:92
19F:138 -F:194
20G:54 -G:74
21G:119 -G:205
22G:126 -G:196
23G:131 -G:157
24G:218 -G:247
25G:228 -G:239
26G:296 -G:331
27G:378 -G:445
28G:385 -G:418
29G:501 -B:605
30H:22 -H:92
31H:138 -H:194
32I:22 -I:92
33I:32 -I:98
34I:223 -I:286
35J:54 -J:74
36J:119 -J:205
37J:126 -J:196
38J:131 -J:157
39J:218 -J:247
40J:228 -J:239
41J:296 -J:331
42J:378 -J:445
43J:385 -J:418
44J:501 -K:605
45K:598 -K:604
46L:23 -L:88
47L:135 -L:194
48M:23 -M:88
49M:135 -M:194
50N:22 -N:92
51N:138 -N:194
52O:22 -O:92
53O:32 -O:98
54O:223 -O:286

(-) Cis Peptide Bonds  (15, 15)

Asymmetric/Biological Unit
No.Residues
1Gly G:312 -Pro G:313
2Tyr L:141 -Pro L:142
3Phe H:144 -Pro H:145
4Glu H:146 -Pro H:147
5Ser D:207 -Pro D:208
6Gly A:312 -Pro A:313
7Tyr E:141 -Pro E:142
8Phe F:144 -Pro F:145
9Glu F:146 -Pro F:147
10Ser I:207 -Pro I:208
11Gly J:312 -Pro J:313
12Tyr M:141 -Pro M:142
13Phe N:144 -Pro N:145
14Glu N:146 -Pro N:147
15Ser O:207 -Pro O:208

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5D9Q)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5D9Q)

(-) Exons   (0, 0)

(no "Exon" information available for 5D9Q)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:448
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeee....eee.........hhhhhhh......hhhhh........eeee....eeee...hhhhhhhhhhhhhhhhhh......hhhhh..eeeee............eeeeeeeee......eeeeeeeee...eee...eeee.......eee...................eeeeee.......eeee..eeee.........................eee..........eeeeeeeeeeeeeee.....eeeee.....eeeee.........eeeeeehhhhhhhhhhhhhhhhhhhh....eee......hhhhhheeeee..eeeee.......eee.....eeeeeeeee.eehhhhh...eee.......eeeeeeeeeeeeee.........eeeee....hhhhhhh....eeeeee..eeeeee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5d9q A   32 ENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGANNTSTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKR  503
                                    41        51        61        71        81        91       101       111       121       131       141|      159       169       179     ||192       202       212       222       232       242       252       262       272       282       292       302      |314       323       333       343       353       363       373       383       393    || 415       425       435       445       455       465       475       485       495        
                                                                                                                                       141|                                185|                                                                                                                     309|      321A                                                                          398|                                                                                            
                                                                                                                                        150                                 189                                                                                                                      312                                                                                     411                                                                                            


Chain B from PDB  Type:PROTEIN  Length:121
                                                                                                                                                          
               SCOP domains ------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........hhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhh......eeeeeee.................hhhhhhhhhh.hhhhhhhhhhh.hhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------- Transcript
                5d9q B  519 FLGFLGAAGSTMGAASMTLTVQARNLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLAL  663
                                   528       538     ||572       582       592       602       612       622       632       642       652       662 
                                                   544|                                                                                              
                                                    569                                                                                              


Chain C from PDB  Type:PROTEIN  Length:121
                                                                                                                                                          
               SCOP domains ------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........hhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhh......eeeeeee........hhhhhh...hhhhhhhhhh.hhhhhhhhhhh.hhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------- Transcript
                5d9q C  519 FLGFLGAAGSTMGAASMTLTVQARNLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLAL  663
                                   528       538     ||572       582       592       602       612       622       632       642       652       662 
                                                   544|                                                                                              
                                                    569                                                                                              


Chain D from PDB  Type:PROTEIN  Length:222
                                                                                                                                                                                                                                                               
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeee...eee.....eeeeeeee..hhhhh.eeeeee......eeeeee......eee.......eeeeee....eeeeee...hhhhheeeeeeeeeee....eeeeeeeee...eeeee...eee..eee......eeeeee......eeeeee......eeeee...ee.......eeeeee..eeeeee...hhhhheeeeeee..ee...eeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                5d9q D    1 xVRLSQSGGQMKKPGESMRLSCRASGYEFLNCPINWIRLAPGRRPEWMGWLKPRGGAVNYARKFQGRVTMTRDVYSDTAFLELRSLTSDDTAVYFCTRGKYCTARDYYNWDFEHWGRGAPVTVSVLTQSPATLSLSPGETAIISCRTSQSGSLAWYQQRPGQAPRLVIYSGSTRAAGIPDRFSGSRWGADYNLSISNLESGDFGVYYCQQYEFFGQGTKVQV  300
                            |       10        20        30        40        50  |     59        69        79   |||  86        96   ||||102       112   ||  208       218       228       238       248       258       268       278       288       298  
                            1-PCA                                             52A                            82A||               99A|||              116|                                                                                                 
                                                                                                              82B|                99B||               203                                                                                                 
                                                                                                               82C                 99C|                                                                                                                   
                                                                                                                                    99D                                                                                                                   


Chain E from PDB  Type:PROTEIN  Length:208
                                                                                                                                                                                                                                                 
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee....eeeeeeeee.......eeeee......eeee.............eee........eeeeeee..hhhhh.eeeee...............eeeee........eeeee..hhhhhh...eeeeeeee......eeeeeee..ee....eee...........eeeeeeeehhhhhh....eeeeeee..eeeeeee... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5d9q E    8 TFVSVAPGQTARITCGEESLGSRSVIWYQQRPGQAPSLIIYNNNDRPSGIPDRFSGSPGSTFGTTATLTITSVEAGDEADYYCHIWDSRRPTNWVFGEGTTLIVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPT  210
                             ||     18        28        38        48        58       67A||      75        85        95|||    102       112       122       132       142       152       162       172       182       192       202        
                             9|                                                      67A||                          95A||                                                                                                                   
                             11                                                       67B|                           95B|                                                                                                                   
                                                                                       67C                            95C                                                                                                                   


Chain F from PDB  Type:PROTEIN  Length:227
                                                                                                                                                                                                                                                                    
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee.........eeeeeeeee.......eeeeeee......eeeeeee....eee.......eeeeee....eeeeeee..hhhhheeeeeeeeeeeeee..hhhhh.eeeeee.......eee..........eeeee.....eeeeeeeeeee.....eeee.hhh....eee...ee.....eeeeeeeeee.........eeeeeehhhheeeeee... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5d9q F    1 QVHLQESGPGLVKPSETLSLTCQVSGTLVRDNYWSWIRQPLGKQPEWIGYVHDSGDTNYNPSLKSRVHLSLDKSKNLVSLRLTGVTAADSAIYYCATTKHGRRIYGVVAFKEWFTYFYMDVWGKGTSVTVSSASTKGPSVFPLAPSSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP  211
                                    10        20        30        40        50        60        70        80  |||   87        97   |||100G||||||100Q|      109       119      |134       144       154       164       174       184       194       204       
                                                                                                            82A||               100A|||||100J||||||||                       126|                                                                               
                                                                                                             82B|                100B|||||100K|||||||                        132                                                                               
                                                                                                              82C                 100C|||||100L||||||                                                                                                          
                                                                                                                                   100D|||||100M|||||                                                                                                          
                                                                                                                                    100E|||| 100N||||                                                                                                          
                                                                                                                                     100F|||  100O|||                                                                                                          
                                                                                                                                      100G||   100P||                                                                                                          
                                                                                                                                       100H|    100Q|                                                                                                          
                                                                                                                                        100I     100R                                                                                                          


Chain G from PDB  Type:PROTEIN  Length:448
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeee....eee.........hhhhhhh......hhhhh........eeee....eeee...hhhhhhhhhhhhhhhhhh......hhhhh..eeeee............eeeeeeeee......eeeeeeeee...eee...eeee.......eee...................eeeeee.......eeee..eeee.........................eee..........eeeeeeeeeeeeeee.....eeeee.....eeeee.........eeeeeehhhhhhhhhhhhhhhhhhhh....eee......hhhhhheeeee..eeeee.......eee.....eeeeeeeee.eehhhhh...eee.......eeeeeeeeeeeeee.........eeeee....hhhhhhh....eeeeee..eeeeee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5d9q G   32 ENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGANNTSTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKR  503
                                    41        51        61        71        81        91       101       111       121       131       141|      159       169       179     ||192       202       212       222       232       242       252       262       272       282       292       302      |314       323       333       343       353       363       373       383       393    || 415       425       435       445       455       465       475       485       495        
                                                                                                                                       141|                                185|                                                                                                                     309|      321A                                                                          398|                                                                                            
                                                                                                                                        150                                 189                                                                                                                      312                                                                                     411                                                                                            


Chain H from PDB  Type:PROTEIN  Length:227
                                                                                                                                                                                                                                                                    
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee.........eeeeeeeee.......eeeeeee......eeeeeee....eee.......eeeeee....eeeeeee..hhhhheeeeeeeeeeeeee..hhhhh.eeeeee.......eee..........eeeee.....eeeeeeeeeee.....eeee.hhh....eee...ee.....eeeeeeeeee.........eeeeeehhhheeeeee... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5d9q H    1 QVHLQESGPGLVKPSETLSLTCQVSGTLVRDNYWSWIRQPLGKQPEWIGYVHDSGDTNYNPSLKSRVHLSLDKSKNLVSLRLTGVTAADSAIYYCATTKHGRRIYGVVAFKEWFTYFYMDVWGKGTSVTVSSASTKGPSVFPLAPSSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP  211
                                    10        20        30        40        50        60        70        80  |||   87        97   |||100G||||||100Q|      109       119      |134       144       154       164       174       184       194       204       
                                                                                                            82A||               100A|||||100J||||||||                       126|                                                                               
                                                                                                             82B|                100B|||||100K|||||||                        132                                                                               
                                                                                                              82C                 100C|||||100L||||||                                                                                                          
                                                                                                                                   100D|||||100M|||||                                                                                                          
                                                                                                                                    100E|||| 100N||||                                                                                                          
                                                                                                                                     100F|||  100O|||                                                                                                          
                                                                                                                                      100G||   100P||                                                                                                          
                                                                                                                                       100H|    100Q|                                                                                                          
                                                                                                                                        100I     100R                                                                                                          


Chain I from PDB  Type:PROTEIN  Length:222
                                                                                                                                                                                                                                                               
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeee...eee.....eeeeeeee..hhhhh.eeeeee......eeeeee......eee.hhhh..eeeeee....eeeeee...hhhhheeeeeeeeeee....eeeeeeeee...eeeee...eee..eee......eeeeee......eeeeee......eeeee...ee.......eeeeee..eeeeee...hhhhheeeeeee..ee...eeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                5d9q I    1 xVRLSQSGGQMKKPGESMRLSCRASGYEFLNCPINWIRLAPGRRPEWMGWLKPRGGAVNYARKFQGRVTMTRDVYSDTAFLELRSLTSDDTAVYFCTRGKYCTARDYYNWDFEHWGRGAPVTVSVLTQSPATLSLSPGETAIISCRTSQSGSLAWYQQRPGQAPRLVIYSGSTRAAGIPDRFSGSRWGADYNLSISNLESGDFGVYYCQQYEFFGQGTKVQV  300
                            |       10        20        30        40        50  |     59        69        79   |||  86        96   ||||102       112   ||  208       218       228       238       248       258       268       278       288       298  
                            1-PCA                                             52A                            82A||               99A|||              116|                                                                                                 
                                                                                                              82B|                99B||               203                                                                                                 
                                                                                                               82C                 99C|                                                                                                                   
                                                                                                                                    99D                                                                                                                   


Chain J from PDB  Type:PROTEIN  Length:448
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeee....eee.........hhhhhhh......hhhhh........eeee....eeee...hhhhhhhhhhhhhhhhhh......hhhhh..eeeee............eeeeee............eeeeee...eee...eeee.......eee...................eeeeee.......eeee..eeee.........................eee..........eeeeeeeeeeeeeee.....eeeee.....eeeee.........eeeeeehhhhhhhhhhhhhhhhhhhh....eee......hhhhhheeeee..eeeee.......eee.....eeeeeeeee.eehhhhh...eee.......eeeeeeeeeeeeee.........eeeee....hhhhhhh....eeeeee..eeeeee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5d9q J   32 ENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGANNTSTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKR  503
                                    41        51        61        71        81        91       101       111       121       131       141|      159       169       179     ||192       202       212       222       232       242       252       262       272       282       292       302      |314       323       333       343       353       363       373       383       393    || 415       425       435       445       455       465       475       485       495        
                                                                                                                                       141|                                185|                                                                                                                     309|      321A                                                                          398|                                                                                            
                                                                                                                                        150                                 189                                                                                                                      312                                                                                     411                                                                                            


Chain K from PDB  Type:PROTEIN  Length:121
                                                                                                                                                          
               SCOP domains ------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........hhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhh......eeeeeee........hhhhhh...hhhhhhhhhh.hhhhhhhhhhh....hhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------- Transcript
                5d9q K  519 FLGFLGAAGSTMGAASMTLTVQARNLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLAL  663
                                   528       538     ||572       582       592       602       612       622       632       642       652       662 
                                                   544|                                                                                              
                                                    569                                                                                              


Chain L from PDB  Type:PROTEIN  Length:208
                                                                                                                                                                                                                                                 
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee....eeeeeeeee.......eeeee......eeee.............eee........eeeeeee..hhhhh.eeeee...............eeeee........eeeee..hhhhhh...eeeeeeee......eeeeeee..ee....eee............eeeeeeehhhhhh....eeeeeee..eeeeeee... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5d9q L    8 TFVSVAPGQTARITCGEESLGSRSVIWYQQRPGQAPSLIIYNNNDRPSGIPDRFSGSPGSTFGTTATLTITSVEAGDEADYYCHIWDSRRPTNWVFGEGTTLIVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPT  210
                             ||     18        28        38        48        58       67A||      75        85        95|||    102       112       122       132       142       152       162       172       182       192       202        
                             9|                                                      67A||                          95A||                                                                                                                   
                             11                                                       67B|                           95B|                                                                                                                   
                                                                                       67C                            95C                                                                                                                   


Chain M from PDB  Type:PROTEIN  Length:208
                                                                                                                                                                                                                                                 
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee....eeeeeeeee.......eeeee......eeee.............eee........eeeeeee..hhhhh.eeeee...............eeeee........eeeee..hhhhhh...eeeeeeee......eeeeeee..ee....eee............eeeeeeehhhhhhhh..eeeeeee..eeeeeee... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5d9q M    8 TFVSVAPGQTARITCGEESLGSRSVIWYQQRPGQAPSLIIYNNNDRPSGIPDRFSGSPGSTFGTTATLTITSVEAGDEADYYCHIWDSRRPTNWVFGEGTTLIVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPT  210
                             ||     18        28        38        48        58       67A||      75        85        95|||    102       112       122       132       142       152       162       172       182       192       202        
                             9|                                                      67A||                          95A||                                                                                                                   
                             11                                                       67B|                           95B|                                                                                                                   
                                                                                       67C                            95C                                                                                                                   


Chain N from PDB  Type:PROTEIN  Length:227
                                                                                                                                                                                                                                                                    
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee.........eeeeeeeee.......eeeeeee......eeeeeee....eee.......eeeeee....eeeeeee..hhhhheeeeeeeeeeeeee..hhhhh.eeeeee.......eee..........eeeee.....eeeeeeeeeee.....eeee.hhh....eee...ee.....eeeeeeeeee.........eeeeeehhhheeeeee... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5d9q N    1 QVHLQESGPGLVKPSETLSLTCQVSGTLVRDNYWSWIRQPLGKQPEWIGYVHDSGDTNYNPSLKSRVHLSLDKSKNLVSLRLTGVTAADSAIYYCATTKHGRRIYGVVAFKEWFTYFYMDVWGKGTSVTVSSASTKGPSVFPLAPSSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP  211
                                    10        20        30        40        50        60        70        80  |||   87        97   |||100G||||||100Q|      109       119      |134       144       154       164       174       184       194       204       
                                                                                                            82A||               100A|||||100J||||||||                       126|                                                                               
                                                                                                             82B|                100B|||||100K|||||||                        132                                                                               
                                                                                                              82C                 100C|||||100L||||||                                                                                                          
                                                                                                                                   100D|||||100M|||||                                                                                                          
                                                                                                                                    100E|||| 100N||||                                                                                                          
                                                                                                                                     100F|||  100O|||                                                                                                          
                                                                                                                                      100G||   100P||                                                                                                          
                                                                                                                                       100H|    100Q|                                                                                                          
                                                                                                                                        100I     100R                                                                                                          


Chain O from PDB  Type:PROTEIN  Length:222
                                                                                                                                                                                                                                                               
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeee...eee.....eeeeeeee..hhhhh.eeeeee......eeeeee......eee.......eeeeee....eeeeee...hhhhheeeeeeeeeee....eeeeeeeee...eeeee...eee..eee......eeeeee......eeeeee......eeeee...ee.......eeeeee..eeeeee...hhhhheeeeeee..ee...eeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                5d9q O    1 xVRLSQSGGQMKKPGESMRLSCRASGYEFLNCPINWIRLAPGRRPEWMGWLKPRGGAVNYARKFQGRVTMTRDVYSDTAFLELRSLTSDDTAVYFCTRGKYCTARDYYNWDFEHWGRGAPVTVSVLTQSPATLSLSPGETAIISCRTSQSGSLAWYQQRPGQAPRLVIYSGSTRAAGIPDRFSGSRWGADYNLSISNLESGDFGVYYCQQYEFFGQGTKVQV  300
                            |       10        20        30        40        50  |     59        69        79   |||  86        96   ||||102       112   ||  208       218       228       238       248       258       268       278       288       298  
                            1-PCA                                             52A                            82A||               99A|||              116|                                                                                                 
                                                                                                              82B|                99B||               203                                                                                                 
                                                                                                               82C                 99C|                                                                                                                   
                                                                                                                                    99D
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5D9Q)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5D9Q)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5D9Q)

(-) Gene Ontology  (36, 50)

Asymmetric/Biological Unit(hide GO term definitions)

 Visualization

(-) Interactive Views

Asymmetric/Biological Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    BMA  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    MAN  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    NAG  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    PCA  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
(no "Sites" information available for 5d9q)
 
  Cis Peptide Bonds
    Glu F:146 - Pro F:147   [ RasMol ]  
    Glu H:146 - Pro H:147   [ RasMol ]  
    Glu N:146 - Pro N:147   [ RasMol ]  
    Gly A:312 - Pro A:313   [ RasMol ]  
    Gly G:312 - Pro G:313   [ RasMol ]  
    Gly J:312 - Pro J:313   [ RasMol ]  
    Phe F:144 - Pro F:145   [ RasMol ]  
    Phe H:144 - Pro H:145   [ RasMol ]  
    Phe N:144 - Pro N:145   [ RasMol ]  
    Ser D:207 - Pro D:208   [ RasMol ]  
    Ser I:207 - Pro I:208   [ RasMol ]  
    Ser O:207 - Pro O:208   [ RasMol ]  
    Tyr E:141 - Pro E:142   [ RasMol ]  
    Tyr L:141 - Pro L:142   [ RasMol ]  
    Tyr M:141 - Pro M:142   [ RasMol ]  
 

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
[ Asym./Biol. Unit PNG format ](automatic orientation, automatically generated)
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick
[ mono PDF format | stereo PDF format ](default orientation, automatically generated)

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  5d9q
    Family and Domain Information: ProDom | SYSTERS
    General Structural Information: GlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in Membranes: OPM
    Protein Surface: SURFACE
    Secondary Structure: DSSP (structure derived) | HSSP (homology derived)
    Structural Genomics: GeneCensus
    Structural Neighbours: CE | VAST
    Structure Classification: CATH | Dali | SCOP
    Validation and Original Data: BMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  IGLC2_HUMAN | P0DOY2
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
  IGLC3_HUMAN | P0DOY3
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
  Q2N0S6_9HIV1 | Q2N0S6
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/TrEMBL
  Q2N0S9_9HIV1 | Q2N0S9
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
  S6B291_HUMAN | S6B291
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
 
Access by Enzyme Classificator   (EC Number)
  (no 'Enzyme Classificator' available)
    General Enzyme Information: BRENDA | EC-PDB | Enzyme | IntEnz
    Pathway: KEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease Information: OMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related Information: GenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain Information: XDom
    Interatomic Contacts of Structural Units: CSU
    Ligand-protein Contacts: LPC
    Protein Cavities: castP
    Sequence and Secondary Structure: PDBCartoon
    Structure Alignment: STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence Browser: STING
 
Access by UniProt ID/Accession number
  IGLC2_HUMAN | P0DOY2
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  IGLC3_HUMAN | P0DOY3
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  Q2N0S6_9HIV1 | Q2N0S6
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  Q2N0S9_9HIV1 | Q2N0S9
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  S6B291_HUMAN | S6B291
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        IGLC2_HUMAN | P0DOY2: 1jvk 1lil 1zvo 2jb5 2jb6 3c2a 3tv3 3twc 3tyg 4eow 4lld 4llm 4llq 4llu 4llw 4lly 4o58 4o5i 5iq7 5iq9
        IGLC3_HUMAN | P0DOY3: 1aqk 3tv3 3twc 3tyg 4lld 4llm 4o58 4o5i 4o5l 4r26 4r2g 5iq7 5iq9 7fab
        Q2N0S6_9HIV1 | Q2N0S6: 5v7j 5v8l 5v8m 5viy 5vj6 5w6d
        S6B291_HUMAN | S6B291: 3mnw 3mnz 4eow 5c7k 5cus 5veb 5vic 5vig 5viy 5vj6 5vob 5voc 5vod
UniProtKB/TrEMBL
        Q2N0S6_9HIV1 | Q2N0S6: 3j5m 4nco 4zmj 5aco 5c7k 5cez 5cjx 5fyl 5i8h 5js9 5jsa 5t3s 5t3x 5t3z 5thr 5u1f 5utf 5uty
        S6B291_HUMAN | S6B291: 4llw 4lly 4oqt 4ydv

(-) Related Entries Specified in the PDB File

4nco 4tvp 5kzc