Chain H from PDB Type:PROTEIN Length:231
SCOP domains d3c2ah1 H:1-113 Immunoglobulin heavy chain variable domain, VH d3c2ah2 H:114-227 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma SCOP domains
CATH domains 3c2aH01 H:1-113 Immunoglobulins 3c2aH02 H:114-223 Immunoglobulins -- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeee...ee.....eeeeeeee..hhhhh.eeeeee.....eeeeeee.hhhhh..eee.......eeeeeehhh.eeeeee...hhhhheeeeeeeeeeeeee....eeeeeeeeee...eeeee........eeeee..........eeeeeeeeeee.....eeee.hhh....eee...ee.....eeeeeeeeee.hhh.....eeeeeehhh.eeeeee... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3c2a H 1 EVQLVESGGGLVKPGGSLRLTCVASGFTFSDVWLNWVRQAPGKGLEWVGRIKSRTDGGTTDYAASVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYSCTTDGFIMIRGVSEDYYYYYMDVWGKGTTVTVSSASTKGPSVFPLAPCSRSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYTCNVNHKPSNTKVDKRVEL 227
10 20 30 40 50 ||| 57 67 77 |||84 94 100D|||||||102 112 122 134 144 154||| 169| 180| 191 203| 214 226
52A|| 82A|| 100A|||||100J|| 130| 154||| 169| 180| 200|| 223|
52B| 82B| 100B|||||100K| 133 156|| 171 182 203| 226
52C 82C 100C|||||100L 157| 205
100D||||| 162
100E||||
100F|||
100G||
100H|
100I
Chain I from PDB Type:PROTEIN Length:231
SCOP domains d3c2ai1 I:1-113 Immunoglobulin heavy chain variable domain, VH d3c2ai2 I:114-227 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma SCOP domains
CATH domains 3c2aI01 I:1-113 Immunoglobulins 3c2aI02 I:114-223 Immunoglobulins -- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeee...ee.....eeeeeeee..hhhhh.eeeeee.....eeeeeee........eee.......eeeeeehhh.eeeeee...hhhhheeeeeeeeeeeeee....eeeeeeeeee...eeeee........eeeee..........eeeeeeeeeee.....eeee.hhh....eee...ee.....eeeeeeeeee.hhh.....eeeeee....eeeeee... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3c2a I 1 EVQLVESGGGLVKPGGSLRLTCVASGFTFSDVWLNWVRQAPGKGLEWVGRIKSRTDGGTTDYAASVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYSCTTDGFIMIRGVSEDYYYYYMDVWGKGTTVTVSSASTKGPSVFPLAPCSRSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYTCNVNHKPSNTKVDKRVEL 227
10 20 30 40 50 ||| 57 67 77 |||84 94 100D|||||||102 112 122 134 144 154||| 169| 180| 191 203| 214 226
52A|| 82A|| 100A|||||100J|| 130| 154||| 169| 180| 200|| 223|
52B| 82B| 100B|||||100K| 133 156|| 171 182 203| 226
52C 82C 100C|||||100L 157| 205
100D||||| 162
100E||||
100F|||
100G||
100H|
100I
Chain L from PDB Type:PROTEIN Length:216
aligned with IGLC2_HUMAN | P0DOY2 from UniProtKB/Swiss-Prot Length:106
Alignment length:216
1
- - - - - - - - - - - | 9 19 29 39 49 59 69 79 89 99
IGLC2_HUMAN - ---------------------------------------------------------------------------------------------------------------GQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC 105
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
CATH domains -3c2aL01 L:2-107 Immunoglobulins 3c2aL02 L:108-211 Immunoglobulins --- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ........eeee.....eeeeee...........eeeee......eeee.............eeeeee..eeeeee...hhhhheeeeeeee.......eee...eeeee........eeeee..hhhhhhh..eeeeeeeeee.....eeeeee..eee...eee...ee.....eeeeeeeeehhhhhhhh..eeeeeee..eeeeeeehhhhh Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IG_MHC -------------- PROSITE
Transcript 1 ---------------------------------------------------------------------------------------------------------------Exon 1.1 PDB: L:107-214 (gaps) UniProt: 1-106 Transcript 1
3c2a L 1 QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVLWYQQFPGTAPKLLIYGNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYFCATWDSGLSADWVFGGGTKLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC 214
11 21 ||29 39 49 59 69 79 89 ||96 106| 115 125 135 145 155 165 || 176 186 196 || 208
9| 27A| 95A|| 106A 168| 200|
11 27B 95B| 170 203
95C
Chain M from PDB Type:PROTEIN Length:216
aligned with IGLC2_HUMAN | P0DOY2 from UniProtKB/Swiss-Prot Length:106
Alignment length:216
1
- - - - - - - - - - - | 9 19 29 39 49 59 69 79 89 99
IGLC2_HUMAN - ---------------------------------------------------------------------------------------------------------------GQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC 105
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
CATH domains -3c2aM01 M:2-107 Immunoglobulins 3c2aM02 M:108-211 Immunoglobulins --- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ........eeee.....eeeeee...........eeeee......eeee.............eeeeee..eeeeee...hhhhheeeeeeee.......eee...eeeee........eeeee..hhhhhhh..eeeeeeeeee.....eeeeee...ee...eee...ee.....eeeeeeeeehhhhhhhh..eeeeeee..eeeeeee..... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IG_MHC -------------- PROSITE
Transcript 1 ---------------------------------------------------------------------------------------------------------------Exon 1.1 PDB: M:107-214 (gaps) UniProt: 1-106 Transcript 1
3c2a M 1 QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVLWYQQFPGTAPKLLIYGNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYFCATWDSGLSADWVFGGGTKLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC 214
11 21 ||29 39 49 59 69 79 89 ||96 106| 115 125 135 145 155 165 || 176 186 196 || 208
9| 27A| 95A|| 106A 168| 200|
11 27B 95B| 170 203
95C
Chain P from PDB Type:PROTEIN Length:13
aligned with Q9YWB6_9HIV1 | Q9YWB6 from UniProtKB/TrEMBL Length:109
Alignment length:13
58
Q9YWB6_9HIV1 49 KSIHLGPGRAFYA 61
SCOP domains ------------- SCOP domains
CATH domains ------------- CATH domains
Pfam domains ------------- Pfam domains
Sec.struct. author .eeee......ee Sec.struct. author
SAPs(SNPs) ------------- SAPs(SNPs)
PROSITE ------------- PROSITE
Transcript ------------- Transcript
3c2a P 305 KSIHLGPGRAFYA 319
|| 316
309|
312
Chain Q from PDB Type:PROTEIN Length:13
aligned with Q9YWB6_9HIV1 | Q9YWB6 from UniProtKB/TrEMBL Length:109
Alignment length:13
58
Q9YWB6_9HIV1 49 KSIHLGPGRAFYA 61
SCOP domains ------------- SCOP domains
CATH domains ------------- CATH domains
Pfam domains ------------- Pfam domains
Sec.struct. author .eeee........ Sec.struct. author
SAPs(SNPs) ------------- SAPs(SNPs)
PROSITE ------------- PROSITE
Transcript ------------- Transcript
3c2a Q 305 KSIHLGPGRAFYA 319
|| 316
309|
312
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(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |