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Asym./Biol. Unit (Jmol Viewer)

Asym./Biol. Unit - sites (Jmol Viewer)

Title :   TRYPSIN SPECIFICITY AS ELUCIDATED BY LIE CALCULATIONS, X-RAY STRUCTURES AND ASSOCIATION CONSTANT MEASUREMENTS

Authors :   H. -K. S. Leiros, B. O. Brandsdal, O. A. Andersen, V. Os, I. Leiros, R. Helland, J. Otlewski, N. P. Willassen, A. O. Smalas

Date :   09 Dec 03 (Deposition) - 15 Jan 04 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.30

Chains :   Asym./Biol. Unit : A

Keywords :   Hydrolase, Trypsin, Inhibitor Specificity, Electrostatic Interactions, Cold-Adaptation, Molecular Dynamics, Binding Free Energy Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   H. -K. S. Leiros, B. O. Brandsdal, O. A. Andersen, V. Os, I. Leiros, R. Helland, J. Otlewski, N. P. Willassen, A. O. Smalas
Trypsin Specificity As Elucidated By Lie Calculations, X-Ray Structures, And Association Constant Measurements
Protein Sci. V. 13 1056 2004
PubMed-ID: 15044735 | Reference-DOI: 10.1110/PS.03498604

Molecule 1 - TRYPSINOGEN
	Chains	:	A
	EC Number	:	3.4.21.4
	Organism Common	:	BOVINE
	Organism Scientific	:	BOS TAURUS
	Organism Taxid	:	9913
	Synonym	:	BETA-TRYPSIN

		1
Asymmetric/Biological Unit	:	A

Summary Information (see also Sequences/Alignments below)

Asymmetric/Biological Unit (3, 3)

No.	Name	Count	Type	Full Name
1	CA	1	Ligand/Ion	CALCIUM ION
2	GOL	1	Ligand/Ion	GLYCEROL
3	PBN	1	Ligand/Ion	4-PHENYLBUTYLAMINE

Asymmetric Unit (3, 3)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	GLU A:70 , ASN A:72 , VAL A:75 , GLU A:80 , HOH A:2052 , HOH A:2063	BINDING SITE FOR RESIDUE CA A1248
2	AC2	SOFTWARE	ASP A:189 , SER A:190 , CYS A:191 , SER A:195 , TRP A:215 , GLY A:216 , HOH A:2160 , HOH A:2169 , HOH A:2179	BINDING SITE FOR RESIDUE PBN A1246
3	AC3	SOFTWARE	GLU A:80 , GLN A:81 , PHE A:82 , HOH A:2193	BINDING SITE FOR RESIDUE GOL A1247

Asymmetric/Biological Unit

No.	Residues
1	A:22	-	A:157
2	A:42	-	A:58
3	A:128	-	A:232
4	A:136	-	A:201
5	A:168	-	A:182
6	A:191	-	A:220
7	A:191	-	A:220

(no "Cis Peptide Bond" information available for 1UTP)

(no "SAP(SNP)/Variant" information available for 1UTP)

Asymmetric/Biological Unit (3, 3)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	TRYPSIN_DOM	PS50240	Serine proteases, trypsin domain profile.	TRY1_BOVIN	24-244	1	A:16-243
2	TRYPSIN_HIS	PS00134	Serine proteases, trypsin family, histidine active site.	TRY1_BOVIN	59-64	1	A:53-58
3	TRYPSIN_SER	PS00135	Serine proteases, trypsin family, serine active site.	TRY1_BOVIN	194-205	1	A:189-200

Asymmetric/Biological Unit (4, 4)

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.1	ENSBTAT00000033479	1	ENSBTAE00000401279	chr4:109299627-109299547	81	TRY1_BOVIN	1-16	16	0	-	-
1.2	ENSBTAT00000033479	2	ENSBTAE00000397626	chr4:109298170-109298011	160	TRY1_BOVIN	16-69	54	1	A:16-63 (gaps)	48
1.3	ENSBTAT00000033479	3	ENSBTAE00000409037	chr4:109297593-109297340	254	TRY1_BOVIN	69-154	86	1	A:63-151 (gaps)	89
1.4	ENSBTAT00000033479	4	ENSBTAE00000386782	chr4:109296654-109296518	137	TRY1_BOVIN	154-199	46	1	A:151-194	46
1.5	ENSBTAT00000033479	5	ENSBTAE00000422174	chr4:109295990-109295749	242	TRY1_BOVIN	200-248	49	1	A:195-245 (gaps)	52

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:223
 aligned with TRY1_BOVIN | P00760 from UniProtKB/Swiss-Prot  Length:246

    Alignment length:223
                                    33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243   
          TRY1_BOVIN     24 IVGGYTCGANTVPYQVSLNSGYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVEGNEQFISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSNMFCAGYLEGGKDSCQGDSGGPVVCSGKLQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTIASN  246
               SCOP domains d1utpa_ A: Trypsin(ogen)                                                                                                                                                                                                        SCOP domains
               CATH domains 1utpA01     1utpA02 A:28-120,A:233-245 Trypsin-like serine proteases                                  1utpA01 A:16-27,A:121-232 Trypsin-like serine proteases                                                     1utpA02       CATH domains
               Pfam domains Trypsin-1utpA01 A:16-238                                                                                                                                                                                                ------- Pfam domains
         Sec.struct. author ....ee........eeeee...eeeeeeeee..eeeehhhhh....eeee............eeeeeeeeee.............eeeee........................eeeeee...............eeeeee..hhhhhhhhh.......eeee................eeee..eeeeeeee..........eeeee...hhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) TRYPSIN_DOM  PDB: A:16-243 UniProt: 24-244                                                                                                                                                                                   -- PROSITE (1)
                PROSITE (2) -----------------------------------TRYPSI---------------------------------------------------------------------------------------------------------------------------------TRYPSIN_SER ----------------------------------------- PROSITE (2)
           Transcript 1 (1) Exon 1.2  PDB: A:16-63 (gaps) UniProt: 16-69  ------------------------------------------------------------------------------------Exon 1.4  PDB: A:151-194 UniProt: 154-199     Exon 1.5  PDB: A:195-245 (gaps)                 Transcript 1 (1)
           Transcript 1 (2) ---------------------------------------------Exon 1.3  PDB: A:63-151 (gaps) UniProt: 69-154                                        -------------------------------------------------------------------------------------------- Transcript 1 (2)
                1utp A   16 IVGGYTCGANTVPYQVSLNSGYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVEGNEQFISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSNMFCAGYLEGGKDSCQGDSGGPVVCSGKLQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTIASN  245
                                    25        37        47        57        67|       78        88        98       108       118      |129||     140       150       160       170       180   |   188       198     ||212    || 222       232       242   
                                             34|                            67|                                                     125|  ||                                                183A 187A              204|     217| |                         
                                              37                             69                                                      127  ||                                                                        209      219 |                         
                                                                                                                                        130|                                                                                  220A                         
                                                                                                                                         132

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric/Biological Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: All beta proteins (24004)

Fold: Trypsin-like serine proteases (1752)

Superfamily: Trypsin-like serine proteases (1752)

Family: Eukaryotic proteases (1343)

Protein domain: Trypsin(ogen) (500)

Cow (Bos taurus) [TaxId: 9913] (392)

d1utpa_

Asymmetric/Biological Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Mainly Beta (13760)

Architecture: Beta Barrel (4804)

Topology: Thrombin, subunit H (1535)

Homologous Superfamily: Trypsin-like serine proteases (1488)

Bovine (Bos taurus) (36)

1a	1utpA01	A:16-27,A:121-232
1b	1utpA02	A:28-120,A:233-245

Asymmetric/Biological Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: Peptidase_PA (797)

Family: Trypsin (679)

Bos taurus (Bovine) (190)

Trypsin-1utpA01

A:16-238

Asymmetric/Biological Unit(hide GO term definitions)

Chain A (TRY1_BOVIN | P00760)

molecular function
	GO:0016787	hydrolase activity	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0008233	peptidase activity	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
	GO:0004252	serine-type endopeptidase activity	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).
	GO:0008236	serine-type peptidase activity	Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).
biological process
	GO:0007586	digestion	The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism.
	GO:0006508	proteolysis	The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
cellular component
	GO:0005576	extracellular region	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
	GO:0005615	extracellular space	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid.

Asymmetric/Biological Unit
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	Cis Peptide Bonds
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Access by PDB/NDB ID
	1utp
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	TRY1_BOVIN \| P00760
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	3.4.21.4
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	TRY1_BOVIN \| P00760
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1aq7	TRYPSIN WITH INHIBITOR AERUGINOSIN 98-B
1auj	BOVINE TRYPSIN COMPLEXED TO META-CYANO- BENZYLIC INHIBITOR
1az8	BOVINE TRYPSIN COMPLEXED TO BIS-PHENYLAMIDINE INHIBITOR
1bju	BETA-TRYPSIN COMPLEXED WITH ACPU
1bjv	BETA-TRYPSIN COMPLEXED WITH APPU
1btp	MOL_ID: 1; MOLECULE: BETA-TRYPSIN; CHAIN: NULL; EC: 3.4.21.4; HETEROGEN: N-[3-[4 -[4-(AMIDINOPHENOXY)-CARBONYL]PHENYL]-2- METHYL-2-PROPENOYL]-N-ALLYLGLYCINE METHANESULFONATE
1btw	MOL_ID: 1; MOLECULE: BETA-TRYPSIN; CHAIN: A ; EC: 3.4.21.4; MOL_ID: 2; MOLECULE: T -BUTOXY-ALA-VAL-BORO-LYS 1,3-PROPANEDIOL MONOESTER; CHAIN: H
1btx	MOL_ID: 1; MOLECULE: BETA-TRYPSIN; CHAIN: A ; EC: 3.4.21.4; MOL_ID: 2; MOLECULE: T -BUTOXY-ALA-VAL-BORO-LYS ETHYL ESTER; CHAIN: H
1bty	MOL_ID: 1; MOLECULE: BETA-TRYPSIN; CHAIN: NULL; EC: 3.4.21.4; HETEROGEN: BENZAMIDINE
1btz	MOL_ID: 1; MOLECULE: BETA-TRYPSIN; CHAIN: A ; EC: 3.4.21.4; MOL_ID: 2; MOLECULE: T -BUTOXY-ALA-VAL-BORO-LYS METHYL ESTER; CHAIN: H
1c1n	RECRUITING ZINC TO MEDIATE POTENT, SPECIFIC INHIBITION OF SERINE PROTEASES
1c1o	RECRUITING ZINC TO MEDIATE POTENT, SPECIFIC INHIBITION OF SERINE PROTEASES
1c1p	RECRUITING ZINC TO MEDIATE POTENT, SPECIFIC INHIBITION OF SERINE PROTEASES
1c1q	RECRUITING ZINC TO MEDIATE POTENT, SPECIFIC INHIBITION OF SERINE PROTEASES
1c1r	RECRUITING ZINC TO MEDIATE POTENT, SPECIFIC INHIBITION OF SERINE PROTEASES
1c1s	RECRUITING ZINC TO MEDIATE POTENT, SPECIFIC INHIBITION OF SERINE PROTEASES
1c1t	RECRUITING ZINC TO MEDIATE POTENT, SPECIFIC INHIBITION OF SERINE PROTEASES
1c2d	RECRUITING ZINC TO MEDIATE POTENT, SPECIFIC INHIBITION OF SERINE PROTEASES
1c2e	RECRUITING ZINC TO MEDIATE POTENT, SPECIFIC INHIBITION OF SERINE PROTEASES
1c2f	RECRUITING ZINC TO MEDIATE POTENT, SPECIFIC INHIBITION OF SERINE PROTEASES
1c2g	RECRUITING ZINC TO MEDIATE POTENT, SPECIFIC INHIBITION OF SERINE PROTEASES
1c2h	RECRUITING ZINC TO MEDIATE POTENT, SPECIFIC INHIBITION OF SERINE PROTEASES
1c2i	RECRUITING ZINC TO MEDIATE POTENT, SPECIFIC INHIBITION OF SERINE PROTEASES
1c2j	RECRUITING ZINC TO MEDIATE POTENT, SPECIFIC INHIBITION OF SERINE PROTEASES
1c2k	RECRUITING ZINC TO MEDIATE POTENT, SPECIFIC INHIBITION OFSERINE PROTEASES
1c2l	RECRUITING ZINC TO MEDIATE POTENT, SPECIFIC INHIBITION OF SERINE PROTEASES
1c2m	RECRUITING ZINC TO MEDIATE POTENT, SPECIFIC INHIBITION OF SERINE PROTEASES
1c5p	STRUCTURAL BASIS FOR SELECTIVITY OF A SMALL MOLECULE, S1-BINDING, SUB- MICROMOLAR INHIBITOR OF UROKINASE TYPE PLASMINOGEN ACTIVATOR
1c5q	STRUCTURAL BASIS FOR SELECTIVITY OF A SMALL MOLECULE, S1-BINDING, SUB- MICROMOLAR INHIBITOR OF UROKINASE TYPE PLASMINOGEN ACTIVATOR
1c5r	STRUCTURAL BASIS FOR SELECTIVITY OF A SMALL MOLECULE, S1-BINDING, SUB- MICROMOLAR INHIBITOR OF UROKINASE TYPE PLASMINOGEN ACTIVATOR
1c5s	STRUCTURAL BASIS FOR SELECTIVITY OF A SMALL MOLECULE, S1-BINDING, SUB- MICROMOLAR INHIBITOR OF UROKINASE TYPE PLASMINOGEN ACTIVATOR
1c5t	STRUCTURAL BASIS FOR SELECTIVITY OF A SMALL MOLECULE, S1-BINDING, SUB- MICROMOLAR INHIBITOR OF UROKINASE TYPE PLASMINOGEN ACTIVATOR
1c5u	STRUCTURAL BASIS FOR SELECTIVITY OF A SMALL MOLECULE, S1-BINDING, SUB- MICROMOLAR INHIBITOR OF UROKINASE TYPE PLASMINOGEN ACTIVATOR
1c5v	STRUCTURAL BASIS FOR SELECTIVITY OF A SMALL MOLECULE, S1-BINDING, SUB- MICROMOLAR INHIBITOR OF UROKINASE TYPE PLASMINOGEN ACTIVATOR
1c9t	COMPLEX OF BDELLASTASIN WITH BOVINE TRYPSIN
1ce5	BOVINE PANCREAS BETA-TRYPSIN IN COMPLEX WITH BENZAMIDINE
1cu7	BOVINE TRYPSIN COMPLEXED WITH 2-[3-AMINO( IMINOMETHYL) PHENOXY]-6-[3-(AMINOMETHYL) PHENOXY]-3,5-DIFLUORO-4- METHYLPYRIDINE (ZK -806299), BINDING MODEL FROM DOUBLE REDOR NMR AND MD SIMULATIONS
1cu8	BOVINE TRYPSIN COMPLEXED WITH 2,6-BIS[3- AMINO(IMINO)METHYL PHENOXY]-3,5-DIFLUORO-4 -METHYLPYRIDINE (ZK-805623), BINDING MODEL FROM DOUBLE REDOR NMR AND MD SIMULATIONS
1cu9	BOVINE TRYPSIN COMPLEXED WITH 2,6-BIS[3- AMINO(IMINO)METHYL PHENOXY]-3,5-DIFLUORO-4 -METHYLPYRIDINE (ZK-805623), BINDING MODEL FROM DOUBLE REDOR NMR AND MD SIMULATIONS
1d6r	CRYSTAL STRUCTURE OF CANCER CHEMOPREVENTIVE BOWMAN-BIRK INHIBITOR IN TERNARY COMPLEX WITH BOVINE TRYPSIN AT 2.3 A RESOLUTION. STRUCTURAL BASIS OF JANUS-FACED SERINE PROTEASE INHIBITOR SPECIFICITY
1eb2	TRYPSIN INHIBITOR COMPLEX (FRA)
1ejm	CRYSTAL STRUCTURE OF THE BPTI ALA16LEU MUTANT IN COMPLEX WITH BOVINE TRYPSIN
1ezx	CRYSTAL STRUCTURE OF A SERPIN:PROTEASE COMPLEX
1f0t	BOVINE TRYPSIN COMPLEXED WITH RPR131247
1f0u	BOVINE TRYPSIN COMPLEXED WITH RPR128515
1f2s	CRYSTAL STRUCTURE OF THE COMPLEX FORMED BETWEEN BOVINE BETA- TRYPSIN AND MCTI-A, A TRYPSIN INHIBITOR OF SQUASH FAMILY AT 1. 8 A RESOLUTION
1g36	TRYPSIN INHIBITOR COMPLEX
1g3b	BOVINE BETA-TRYPSIN BOUND TO META-AMIDINO SCHIFF BASEMAGNESIUM(II) CHELATE
1g3c	BOVINE BETA-TRYPSIN BOUND TO PARA-AMIDINO SCHIFF BASEIRON(III) CHELATE
1g3d	BOVINE BETA-TRYPSIN BOUND TO META-AMIDINO SCHIFF BASECOPPER (II) CHELATE
1g3e	BOVINE BETA-TRYPSIN BOUND TO PARA-AMIDINO SCHIFF-BASECOPPER (II) CHELATE
1g9i	CRYSTAL STRUCTURE OF BETA-TRYSIN COMPLEX IN CYCLOHEXANE
1gbt	BETA-TRYPSIN GUANIDINOBENZOYLATED AT SERINE 195 (PH 5.5)
1ghz	A NOVEL SERINE PROTEASE INHIBITION MOTIF INVOLVING A MULTI-CENTERED SHORT HYDROGEN BONDING NETWORK AT THE ACTIVE SITE
1gi0	A NOVEL SERINE PROTEASE INHIBITION MOTIF INVOLVING A MULTI-CENTERED SHORT HYDROGEN BONDING NETWORK AT THE ACTIVE SITE
1gi1	A NOVEL SERINE PROTEASE INHIBITION MOTIF INVOLVING A MULTI-CENTERED SHORT HYDROGEN BONDING NETWORK AT THE ACTIVE SITE
1gi2	A NOVEL SERINE PROTEASE INHIBITION MOTIF INVOLVING A MULTI-CENTERED SHORT HYDROGEN BONDING NETWORK AT THE ACTIVE SITE
1gi3	A NOVEL SERINE PROTEASE INHIBITION MOTIF INVOLVING A MULTI-CENTERED SHORT HYDROGEN BONDING NETWORK AT THE ACTIVE SITE
1gi4	A NOVEL SERINE PROTEASE INHIBITION MOTIF INVOLVING A MULTI-CENTERED SHORT HYDROGEN BONDING NETWORK AT THE ACTIVE SITE
1gi5	A NOVEL SERINE PROTEASE INHIBITION MOTIF INVOLVING A MULTI-CENTERED SHORT HYDROGEN BONDING NETWORK AT THE ACTIVE SITE
1gi6	A NOVEL SERINE PROTEASE INHIBITION MOTIF INVOLVING A MULTI-CENTERED SHORT HYDROGEN BONDING NETWORK AT THE ACTIVE SITE
1gj6	ENGINEERING INHIBITORS HIGHLY SELECTIVE FOR THE S1 SITES OFSER190 TRYPSIN-LIKE SERINE PROTEASE DRUG TARGETS
1hj9	ATOMIC RESOLUTION STRUCTURES OF TRYPSIN PROVIDE INSIGHT INTO STRUCTURAL RADIATION DAMAGE
1j8a	CRYSTAL STRUCTURE OF BENZAMIDINE INHIBITED BOVINEPANCREATIC TRYPSIN AT 105K TO 1.21A RESOLUTION FROMLABORATORY SOURCE WITH HIGH NUMBER OF WATERS MODELLED
1jir	CRYSTAL STRUCTURE OF TRYPSIN COMPLEX WITH AMYLAMINE INCYCLOHEXANE
1jrs	HEMIACETAL COMPLEX BETWEEN LEUPEPTIN AND TRYPSIN
1jrt	HEMIACETAL COMPLEX BETWEEN LEUPEPTIN AND TRYPSIN
1k1i	BOVINE TRYPSIN-INHIBITOR COMPLEX
1k1j	BOVINE TRYPSIN-INHIBITOR COMPLEX
1k1l	BOVINE TRYPSIN-INHIBITOR COMPLEX
1k1m	BOVINE TRYPSIN-INHIBITOR COMPLEX
1k1n	BOVINE TRYPSIN-INHIBITOR COMPLEX
1k1o	BOVINE TRYPSIN-INHIBITOR COMPLEX
1k1p	BOVINE TRYPSIN-INHIBITOR COMPLEX
1lqe	CRYSTAL STRUCTURE OF TRYPSIN IN COMPLEX WITH 79.
1max	BETA-TRYPSIN PHOSPHONATE INHIBITED
1may	BETA-TRYPSIN PHOSPHONATE INHIBITED
1mts	FACTOR XA SPECIFIC INHIBITOR IN COMPLEX WITH BOVINE TRYPSIN
1mtu	FACTOR XA SPECIFIC INHIBITOR IN COMPLEX WITH BOVINE TRYPSIN
1mtv	FACTOR XA SPECIFIC INHIBITOR IN COMPLEX WITH BOVINE TRYPSIN
1mtw	FACTOR XA SPECIFIC INHIBITOR IN COMPLEX WITH BOVINE TRYPSIN
1n6x	RIP-PHASING ON BOVINE TRYPSIN
1n6y	RIP-PHASING ON BOVINE TRYPSIN
1nc6	POTENT, SMALL MOLECULE INHIBITORS OF HUMAN MAST CELLTRYPTASE. ANTI-ASTHMATIC ACTION OF A DIPEPTIDE-BASEDTRANSITION STATE ANALOGUE CONTAINING BENZOTHIAZOLE KETONE
1ntp	MODIFIED BETA TRYPSIN (MONOISOPROPYLPHOSPHORYL INHIBITED) (NEUTRON DATA)
1o2h	ELABORATE MANIFOLD OF SHORT HYDROGEN BOND ARRAYS MEDIATINGBINDING OF ACTIVE SITE- DIRECTED SERINE PROTEASE INHIBITORS
1o2i	ELABORATE MANIFOLD OF SHORT HYDROGEN BOND ARRAYS MEDIATINGBINDING OF ACTIVE SITE- DIRECTED SERINE PROTEASE INHIBITORS
1o2j	ELABORATE MANIFOLD OF SHORT HYDROGEN BOND ARRAYS MEDIATINGBINDING OF ACTIVE SITE- DIRECTED SERINE PROTEASE INHIBITORS
1o2k	ELABORATE MANIFOLD OF SHORT HYDROGEN BOND ARRAYS MEDIATINGBINDING OF ACTIVE SITE- DIRECTED SERINE PROTEASE INHIBITORS
1o2l	ELABORATE MANIFOLD OF SHORT HYDROGEN BOND ARRAYS MEDIATINGBINDING OF ACTIVE SITE- DIRECTED SERINE PROTEASE INHIBITORS
1o2m	ELABORATE MANIFOLD OF SHORT HYDROGEN BOND ARRAYS MEDIATINGBINDING OF ACTIVE SITE- DIRECTED SERINE PROTEASE INHIBITORS
1o2n	ELABORATE MANIFOLD OF SHORT HYDROGEN BOND ARRAYS MEDIATINGBINDING OF ACTIVE SITE- DIRECTED SERINE PROTEASE INHIBITORS
1o2o	ELABORATE MANIFOLD OF SHORT HYDROGEN BOND ARRAYS MEDIATINGBINDING OF ACTIVE SITE- DIRECTED SERINE PROTEASE INHIBITORS
1o2p	ELABORATE MANIFOLD OF SHORT HYDROGEN BOND ARRAYS MEDIATINGBINDING OF ACTIVE SITE- DIRECTED SERINE PROTEASE INHIBITORS
1o2q	ELABORATE MANIFOLD OF SHORT HYDROGEN BOND ARRAYS MEDIATINGBINDING OF ACTIVE SITE- DIRECTED SERINE PROTEASE INHIBITORS
1o2r	ELABORATE MANIFOLD OF SHORT HYDROGEN BOND ARRAYS MEDIATINGBINDING OF ACTIVE SITE- DIRECTED SERINE PROTEASE INHIBITORS
1o2s	ELABORATE MANIFOLD OF SHORT HYDROGEN BOND ARRAYS MEDIATINGBINDING OF ACTIVE SITE- DIRECTED SERINE PROTEASE INHIBITORS
1o2t	ELABORATE MANIFOLD OF SHORT HYDROGEN BOND ARRAYS MEDIATINGBINDING OF ACTIVE SITE- DIRECTED SERINE PROTEASE INHIBITORS
1o2u	ELABORATE MANIFOLD OF SHORT HYDROGEN BOND ARRAYS MEDIATINGBINDING OF ACTIVE SITE- DIRECTED SERINE PROTEASE INHIBITORS
1o2v	ELABORATE MANIFOLD OF SHORT HYDROGEN BOND ARRAYS MEDIATINGBINDING OF ACTIVE SITE- DIRECTED SERINE PROTEASE INHIBITORS
1o2w	ELABORATE MANIFOLD OF SHORT HYDROGEN BOND ARRAYS MEDIATINGBINDING OF ACTIVE SITE- DIRECTED SERINE PROTEASE INHIBITORS
1o2x	ELABORATE MANIFOLD OF SHORT HYDROGEN BOND ARRAYS MEDIATINGBINDING OF ACTIVE SITE- DIRECTED SERINE PROTEASE INHIBITORS
1o2y	ELABORATE MANIFOLD OF SHORT HYDROGEN BOND ARRAYS MEDIATINGBINDING OF ACTIVE SITE- DIRECTED SERINE PROTEASE INHIBITORS
1o2z	ELABORATE MANIFOLD OF SHORT HYDROGEN BOND ARRAYS MEDIATINGBINDING OF ACTIVE SITE- DIRECTED SERINE PROTEASE INHIBITORS
1o30	ELABORATE MANIFOLD OF SHORT HYDROGEN BOND ARRAYS MEDIATINGBINDING OF ACTIVE SITE- DIRECTED SERINE PROTEASE INHIBITORS
1o31	ELABORATE MANIFOLD OF SHORT HYDROGEN BOND ARRAYS MEDIATINGBINDING OF ACTIVE SITE- DIRECTED SERINE PROTEASE INHIBITORS
1o32	ELABORATE MANIFOLD OF SHORT HYDROGEN BOND ARRAYS MEDIATINGBINDING OF ACTIVE SITE- DIRECTED SERINE PROTEASE INHIBITORS
1o33	ELABORATE MANIFOLD OF SHORT HYDROGEN BOND ARRAYS MEDIATINGBINDING OF ACTIVE SITE- DIRECTED SERINE PROTEASE INHIBITORS
1o34	ELABORATE MANIFOLD OF SHORT HYDROGEN BOND ARRAYS MEDIATINGBINDING OF ACTIVE SITE- DIRECTED SERINE PROTEASE INHIBITORS
1o35	ELABORATE MANIFOLD OF SHORT HYDROGEN BOND ARRAYS MEDIATINGBINDING OF ACTIVE SITE- DIRECTED SERINE PROTEASE INHIBITORS
1o36	ELABORATE MANIFOLD OF SHORT HYDROGEN BOND ARRAYS MEDIATINGBINDING OF ACTIVE SITE- DIRECTED SERINE PROTEASE INHIBITORS
1o37	ELABORATE MANIFOLD OF SHORT HYDROGEN BOND ARRAYS MEDIATINGBINDING OF ACTIVE SITE- DIRECTED SERINE PROTEASE INHIBITORS
1o38	ELABORATE MANIFOLD OF SHORT HYDROGEN BOND ARRAYS MEDIATINGBINDING OF ACTIVE SITE- DIRECTED SERINE PROTEASE INHIBITORS
1o39	ELABORATE MANIFOLD OF SHORT HYDROGEN BOND ARRAYS MEDIATINGBINDING OF ACTIVE SITE- DIRECTED SERINE PROTEASE INHIBITORS
1o3a	ELABORATE MANIFOLD OF SHORT HYDROGEN BOND ARRAYS MEDIATINGBINDING OF ACTIVE SITE- DIRECTED SERINE PROTEASE INHIBITORS
1o3b	ELABORATE MANIFOLD OF SHORT HYDROGEN BOND ARRAYS MEDIATINGBINDING OF ACTIVE SITE- DIRECTED SERINE PROTEASE INHIBITORS
1o3c	ELABORATE MANIFOLD OF SHORT HYDROGEN BOND ARRAYS MEDIATINGBINDING OF ACTIVE SITE- DIRECTED SERINE PROTEASE INHIBITORS
1o3d	ELABORATE MANIFOLD OF SHORT HYDROGEN BOND ARRAYS MEDIATINGBINDING OF ACTIVE SITE- DIRECTED SERINE PROTEASE INHIBITORS
1o3e	ELABORATE MANIFOLD OF SHORT HYDROGEN BOND ARRAYS MEDIATINGBINDING OF ACTIVE SITE- DIRECTED SERINE PROTEASE INHIBITORS
1o3f	ELABORATE MANIFOLD OF SHORT HYDROGEN BOND ARRAYS MEDIATINGBINDING OF ACTIVE SITE- DIRECTED SERINE PROTEASE INHIBITORS
1o3g	ELABORATE MANIFOLD OF SHORT HYDROGEN BOND ARRAYS MEDIATINGBINDING OF ACTIVE SITE- DIRECTED SERINE PROTEASE INHIBITORS
1o3h	ELABORATE MANIFOLD OF SHORT HYDROGEN BOND ARRAYS MEDIATINGBINDING OF ACTIVE SITE- DIRECTED SERINE PROTEASE INHIBITORS
1o3i	ELABORATE MANIFOLD OF SHORT HYDROGEN BOND ARRAYS MEDIATINGBINDING OF ACTIVE SITE- DIRECTED SERINE PROTEASE INHIBITORS
1o3j	ELABORATE MANIFOLD OF SHORT HYDROGEN BOND ARRAYS MEDIATINGBINDING OF ACTIVE SITE- DIRECTED SERINE PROTEASE INHIBITORS
1o3k	ELABORATE MANIFOLD OF SHORT HYDROGEN BOND ARRAYS MEDIATINGBINDING OF ACTIVE SITE- DIRECTED SERINE PROTEASE INHIBITORS
1o3l	ELABORATE MANIFOLD OF SHORT HYDROGEN BOND ARRAYS MEDIATINGBINDING OF ACTIVE SITE- DIRECTED SERINE PROTEASE INHIBITORS
1o3m	ELABORATE MANIFOLD OF SHORT HYDROGEN BOND ARRAYS MEDIATINGBINDING OF ACTIVE SITE- DIRECTED SERINE PROTEASE INHIBITORS
1o3n	ELABORATE MANIFOLD OF SHORT HYDROGEN BOND ARRAYS MEDIATINGBINDING OF ACTIVE SITE- DIRECTED SERINE PROTEASE INHIBITORS
1o3o	ELABORATE MANIFOLD OF SHORT HYDROGEN BOND ARRAYS MEDIATINGBINDING OF ACTIVE SITE- DIRECTED SERINE PROTEASE INHIBITORS
1oph	NON-COVALENT COMPLEX BETWEEN ALPHA-1-PI- PITTSBURGH ANDS195A TRYPSIN
1oyq	TRYPSIN INHIBITOR COMPLEX
1ppc	TRYPSIN COMPLEX WITH NONCOVALENTLY BOUND NAPAP
1ppe	TRYPSIN COMPLEX WITH (CUCURBITA MAXIMA) TRYPSIN INHIBITOR (CMTI-I)
1pph	TRYPSIN COMPLEX WITH NONCOVALENTLY BOUND 3- TAPAP
1qa0	BOVINE TRYPSIN 2-AMINOBENZIMIDAZOLE COMPLEX
1qb1	BOVINE TRYPSIN WITH 1-[2-[5-[AMINO(IMINO) METHYL]-2- HYDROXYPHENOXY]-6-[3-(4,5- DIHYDRO-1-METHYL-1H-IMIDAZOL-2-YL) PHENOXY ]PYRIDIN-4-YL]PIPERIDINE-3-CARBOXYLIC ACID (ZK- 806974)
1qb6	BOVINE TRYPSIN 3,3'-[3,5-DIFLUORO-4- METHYL-2, 6- PYRIDINEDIYLBIS(OXY)]BIS( BENZENECARBOXIMIDAMIDE) (ZK-805623) COMPLEX
1qb9	BOVINE TRYPSIN 7-[[2-[[1-(1-IMINOETHYL) PIPERIDIN-4-YL]OXY]- 9H-CARBOZOL-9-YL] METHYL]NAPHTHALENE-2-CARBOXIMIDAMIDE (ZK- 806450) COMPLEX
1qbn	BOVINE TRYPSIN 2-[AMINO(IMINO)METHYL]-2- HYDROXYPHENOXY]-6- [3-(4,5-DIHYDRO-1H- IMIDAZOL-2-YL)PHENOXY]PYRIDINE-4- CARBOXYLIC ACID (ZK-806688) COMPLEX
1qbo	BOVINE TRYPSIN 7-[[6-[[1-(1-IMINOETHYL) PIPERIDIN-4-YL]OXY]- 2-METHYL-BENZIMIDAZOL- 1-YL]METHYL]NAPHTHALENE-2- CARBOXIMIDAMID ZK -806711 INHIBITOR COMPLEX
1qcp	CRYSTAL STRUCTURE OF THE RWJ-51084 BOVINE PANCREATIC BETA- TRYPSIN AT 1.8 A
1ql7	FACTOR XA SPECIFIC INHIBITOR IN COMPLEX WITH BOVINE TRYPSIN
1ql8	FACTOR XA SPECIFIC INHIBITOR IN COMPLEX WITH BOVINE TRYPSIN
1sbw	CRYSTAL STRUCTURE OF MUNG BEAN INHIBITOR LYSINE ACTIVE FRAGMENT COMPLEX WITH BOVINE BETA-TRYPSIN AT 1.8A RESOLUTION
1sfi	HIGH RESOLUTION STRUCTURE OF A POTENT, CYCLIC PROTEASE INHIBITOR FROM SUNFLOWER SEEDS
1smf	TRYPSIN COMPLEXED WITH BOWMAN-BIRK INHIBITOR
1tab	TRYPSIN COMPLEX WITH BOWMAN-BIRK INHIBITOR ( AB-I)
1taw	BOVINE TRYPSIN COMPLEXED TO APPI
1tgb	TRYPSINOGEN-CA FROM PEG
1tgc	TRYPSINOGEN (0.50 METHANOL, 0.50 WATER)
1tgn	TRYPSINOGEN
1tgs	TRYPSINOGEN COMPLEX WITH PORCINE PANCREATIC SECRETORY TRYPSIN INHIBITOR
1tgt	TRYPSINOGEN (173 DEGREES K, 0.70 METHANOL, 0.30 WATER)
1tio	HIGH PACKING DENSITY FORM OF BOVINE BETA- TRYPSIN IN CYCLOHEXANE
1tld	BETA-TRYPSIN (ORTHORHOMBIC) AT PH 5.3
1tng	TRYPSIN COMPLEXED WITH THE INHIBITOR AMINOMETHYLCYCLOHEXANE
1tnh	TRYPSIN COMPLEXED WITH THE INHIBITOR 4- FLUOROBENZYLAMINE
1tni	TRYPSIN COMPLEXED WITH THE INHIBITOR 4- PHENYLBUTYLAMINE
1tnj	TRYPSIN COMPLEXED WITH THE INHIBITOR 2- PHENYLETHYLAMINE
1tnk	TRYPSIN COMPLEXED WITH THE INHIBITOR 3- PHENYLPROPYLAMINE
1tnl	TRYPSIN COMPLEXED WITH THE INHIBITOR TRANYLCYPROMINE
1tpa	ANHYDRO-TRYPSIN COMPLEX WITH PANCREATIC TRYPSIN INHIBITOR
1tpo	BETA-TRYPSIN (ORTHORHOMBIC) AT PH5.0
1tpp	BETA-TRYPSIN COMPLEX WITH P-AMIDINO-PHENYL- PYRUVATE (APPA)
1tps	TRYPSIN COMPLEXED WITH INHIBITOR A90720A
1tyn	BETA TRYPSIN COMPLEXED WITH CYCLOTHEONAMIDE A
1utn	TRYPSIN SPECIFICITY AS ELUCIDATED BY LIE CALCULATIONS, X-RAY STRUCTURES AND ASSOCIATION CONSTANT MEASUREMENTS
1uto	TRYPSIN SPECIFICITY AS ELUCIDATED BY LIE CALCULATIONS, X-RAY STRUCTURES AND ASSOCIATION CONSTANT MEASUREMENTS
1xuf	TRYPSIN-BABIM-ZN+2, PH 8.2
1xug	TRYPSIN-BABIM-ZN+2, PH 8.2
1xuh	TRYPSIN-KETO-BABIM-CO+2, PH 8.2
1xui	TRYPSIN-KETO-BABIM, ZN+2-FREE, PH 8.2
1xuj	TRYPSIN-KETO-BABIM-ZN+2, PH 8.2
1xuk	TRYPSIN-BABIM-SULFATE, PH 5.9
1yyy	TRYPSIN INHIBITORS WITH RIGID TRIPEPTIDYL ALDEHYDES
1zzz	TRYPSIN INHIBITORS WITH RIGID TRIPEPTIDYL ALDEHYDES
2btc	BOVINE TRYPSIN IN COMPLEX WITH SQUASH SEED INHIBITOR (CUCURBITA PEPO TRYPSIN INHIBITOR II )
2bza	BOVINE PANCREAS BETA-TRYPSIN IN COMPLEX WITH BENZYLAMINE
2ptc	BETA-TRYPSIN COMPLEX WITH PANCREATIC TRYPSIN INHIBITOR
2ptn	TRYPSIN (ORTHORHOMBIC, 2.4 M AMMONIUM SULFATE)
2tga	TRYPSINOGEN (2.4 M MAGNESIUM SULFATE)
2tgd	TRYPSINOGEN, DIISOPROPYLPHOSPHORYL INHIBITED
2tgp	TRYPSINOGEN COMPLEX WITH PANCREATIC TRYPSIN INHIBITOR
2tgt	TRYPSINOGEN (103 DEGREES K, 0.70 METHANOL, 0.30 WATER)
2tio	LOW PACKING DENSITY FORM OF BOVINE BETA- TRYPSIN IN CYCLOHEXANE
2tld	BOVINE TRYPSIN COMPLEX WITH A MODIFIED SSI (STREPTOMYCES SUBTILISIN INHIBITOR) WITH MET 70 REPLACED BY GLY AND MET 73 REPLACED BY LYS (SSI(M70G,M73K))
2tpi	TRYPSINOGEN - PANCREATIC TRYPSIN INHIBITOR - ILE -VAL COMPLEX (2.4 M MAGNESIUM SULFATE)
3btd	THE CRYSTAL STRUCTURES OF THE COMPLEXES BETWEEN THE BOVINE BETA-TRYPSIN AND TEN P1 VARIANTS OF BPTI.
3bte	THE CRYSTAL STRUCTURES OF THE COMPLEXES BETWEEN BOVINE BETA- TRYPSIN AND TEN P1 VARIANTS OF BPTI.
3btf	THE CRYSTAL STRUCTURES OF THE COMPLEXES BETWEEN BOVINE BETA- TRYPSIN AND TEN P1 VARIANTS OF BPTI.
3btg	THE CRYSTAL STRUCTURES OF THE COMPLEXES BETWEEN BOVINE BETA- TRYPSIN AND TEN P1 VARIANTS OF BPTI
3bth	THE CRYSTAL STRUCTURES OF THE COMPLEXES BETWEEN BOVINE BETA- TRYPSIN AND TEN P1 VARIANTS OF BPTI
3btk	THE CRYSTAL STRUCTURES OF THE COMPLEXES BETWEEN BOVINE BETA- TRYPSIN AND TEN P1 VARIANTS OF BPTI
3btm	THE CRYSTAL STRUCTURES OF THE COMPLEXES BETWEEN BOVINE BETA- TRYPSIN AND TEN P1 VARIANTS OF BPTI
3btq	THE CRYSTAL STRUCTURES OF THE COMPLEXES BETWEEN BOVINE BETA- TRYPSIN AND TEN P1 VARIANTS OF BPTI
3btt	THE CRYSTAL STRUCTURES OF THE COMPLEXES BETWEEN BOVINE BETA- TRYPSIN AND TEN P1 VARIANTS OF BPTI
3btw	THE CRYSTAL STRUCTURES OF THE COMPLEXES BETWEEN BOVINE BETA- TRYPSIN AND TEN P1 VARIANTS OF BPTI
3ptb	BETA-TRYPSIN (BENZAMIDINE INHIBITED) AT PH7
3ptn	TRYPSIN (TRIGONAL, 2.4 M AMMONIUM SULFATE)
3tpi	TRYPSINOGEN COMPLEX WITH PANCREATIC TRYPSIN INHIBITOR AND ILE-VAL
4tpi	TRYPSINOGEN COMPLEX WITH THE ARG==15==- ANALOGUE OF PANCREATIC TRYPSIN INHIBITOR AND VAL-VAL
5ptp	STRUCTURE OF HYDROLASE (SERINE PROTEINASE)

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (3, 3)

Sites (3, 3)

SS Bonds (7, 7)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (3, 3)

Exons (4, 4)

Sequences/Alignments

Classification and Annotation

SCOP Domains (1, 1)

CATH Domains (1, 2)

Pfam Domains (1, 1)

Gene Ontology (10, 10)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File