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Class: Mainly Beta (13760)
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Architecture: Single Sheet (341)
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Topology: Rubrerythrin, domain 2 (145)
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Homologous Superfamily: [code=2.20.28.10, no name defined] (77)
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'miyazaki f' (Desulfovibrio vulgaris str) (2)
1RDVA:1-52RUBREDOXIN FROM DESULFOVIBRIO VULGARIS MIYAZAKI F, TRIGONAL CRYSTAL FORM
2RDVA:1-52; B:1-52; C:1-52RUBREDOXIN FROM DESULFOVIBRIO VULGARIS MIYAZAKI F, MONOCLINIC CRYSTAL FORM
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Clostridium pasteurianum. Organism_taxid: 1501 (6)
1BFYA:1-54SOLUTION STRUCTURE OF REDUCED CLOSTRIDIUM PASTEURIANUM RUBREDOXIN, NMR, 20 STRUCTURES
1C09A:1-53; B:1-53; C:1-53RUBREDOXIN V44A CP
1IRNA:1-53RUBREDOXIN (ZN-SUBSTITUTED) AT 1.2 ANGSTROMS RESOLUTION
1IROA:1-53RUBREDOXIN (OXIDIZED, FE(III)) AT 1.1 ANGSTROMS RESOLUTION
4RXNA:1-54CRYSTALLOGRAPHIC REFINEMENT OF RUBREDOXIN AT 1.2 ANGSTROMS RESOLUTION
5RXNA:1-54COMBINED CRYSTALLOGRAPHIC REFINEMENT AND ENERGY MINIMIZATION OF RUBREDOXIN AT 1.2 ANGSTROM RESOLUTION
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Clostridium pasteurianum. Organism_taxid: 1501. (1)
1BE7A:1-54CLOSTRIDIUM PASTEURIANUM RUBREDOXIN C42S MUTANT
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Clostridium pasteurianum. Organism_taxid: 1501. (14)
1FHHA:1-53X-RAY CRYSTAL STRUCTURE OF OXIDIZED RUBREDOXIN
1FHMA:1-53X-RAY CRYSTAL STRUCTURE OF REDUCED RUBREDOXIN
1R0FA:1-53GALLIUM-SUBSTITUTED RUBREDOXIN
1R0GA:1-53MERCURY-SUBSTITUTED RUBREDOXIN
1R0HA:1-53COBALT-SUBSTITUTED RUBREDOXIN
1R0IA:1-53CADMIUM-SUBSTITUTED RUBREDOXIN
1R0JA:1-53NICKEL-SUBSTITUTED RUBREDOXIN
1SMMA:1-54CRYSTAL STRUCTURE OF CP RD L41A MUTANT IN OXIDIZED STATE
1SMUA:1-54CRYSTAL STRUCTURE OF CP RD L41A MUTANT IN REDUCED STATE 1 (DROP-REDUCED)
1SMWA:1-54CRYSTAL STRUCTURE OF CP RD L41A MUTANT IN REDUCED STATE 2 (SOAKED)
1T9OA:201-253; B:101-153; C:1-53CRYSTAL STRUCTURE OF V44G CP RUBREDOXIN
1T9PA:1-54; B:101-154; C:201-254CRYSTAL STRUCTURE OF V44A, G45P CP RUBREDOXIN
1T9QA:1-53CRYSTAL STRUCTURE OF V44L CP RUBREDOXIN
2PVEA:1-52; B:101-152; C:201-252NMR AND X-RAY ANALYSIS OF STRUCTURAL ADDITIVITY IN METAL BINDING SITE-SWAPPED HYBRIDS OF RUBREDOXIN
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Clostridium pasteurianum. Organism_taxid: 1501. Strain: jm109. (3)
1B13A:1-54CLOSTRIDIUM PASTEURIANUM RUBREDOXIN G10A MUTANT
1B2JA:1-54CLOSTRIDIUM PASTEURIANUM RUBREDOXIN G43A MUTANT
1B2OA:1-54; B:1-54CLOSTRIDIUM PASTEURIANUM RUBREDOXIN G10VG43A MUTANT
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Desulfovibrio desulfuricans. Organism_taxid: 876 (1)
6RXNA:1-52THE STRUCTURE OF RUBREDOXIN FROM DESULFOVIBRIO DESULFURICANS
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Desulfovibrio gigas. Organism_taxid: 879 (2)
1RDGA:1-52RUBREDOXIN FROM DESULFOVIBRIO GIGAS. A MOLECULAR MODEL OF THE OXIDIZED FORM AT 1.4 ANGSTROMS RESOLUTION
2DSXA:1-52CRYSTAL STRUCTURE OF RUBREDOXIN FROM DESULFOVIBRIO GIGAS TO ULTRA-HIGH 0.68 A RESOLUTION
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Desulfovibrio gigas. Organism_taxid: 879. (1)
1E8JA:1-52SOLUTION STRUCTURE OF DESULFOVIBRIO GIGAS ZINC RUBREDOXIN, NMR, 20 STRUCTURES
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Desulfovibrio vulgaris. Organism_taxid: 881 (3)
1JYBA:147-191CRYSTAL STRUCTURE OF RUBRERYTHRIN
7RXNA:1-52STRUCTURE OF RUBREDOXIN FROM DESULFOVIBRIO VULGARIS AT 1.5 A RESOLUTION
8RXNA:1-52REFINEMENT OF RUBREDOXIN FROM DESULFOVIBRIO VULGARIS AT 1.0 ANGSTROMS WITH AND WITHOUT RESTRAINTS
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Desulfovibrio vulgaris. Organism_taxid: 881. (5)
1LKMA:147-191CRYSTAL STRUCTURE OF DESULFOVIBRIO VULGARIS RUBRERYTHRIN ALL-IRON(III) FORM
1LKOA:147-191CRYSTAL STRUCTURE OF DESULFOVIBRIO VULGARIS RUBRERYTHRIN ALL-IRON(II) FORM
1LKPA:147-191CRYSTAL STRUCTURE OF DESULFOVIBRIO VULGARIS RUBRERYTHRIN ALL-IRON(II) FORM, AZIDE ADDUCT
1S2ZA:147-191X-RAY CRYSTAL STRUCTURE OF DESULFOVIBRIO VULGARIS RUBRERYTHRIN WITH DISPLACEMENT OF IRON BY ZINC AT THE DIIRON SITE
1S30A:147-191X-RAY CRYSTAL STRUCTURE OF DESULFOVIBRIO VULGARIS RUBRERYTHRIN WITH DISPLACEMENT OF IRON BY ZINC AT THE DIIRON SITE
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Desulfovibrio vulgaris. Strain: strain hildenborough / atcc 29579 / ncimb 8303. (1)
2QL0A:1-52ZINC-SUBSTITUTED RUBREDOXIN FROM DESULFOVIBRIO VULGARIS
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Guillardia theta. Organism_taxid: 55529. (1)
1DX8A:1-70RUBREDOXIN FROM GUILLARDIA THETA
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Guillardia theta. Organism_taxid: 55529. Strain: bl21(de3). (1)
1H7VA:1-60RUBREDOXIN FROM GUILLARDIA THETA
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Hildenborough (Desulfovibrio vulgaris str) (1)
2KKDA:1-52NMR STRUCTURE OF NI SUBSTITUED DESULFOVIBRIO VULGARIS RUBREDOXIN
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Human (Homo sapiens) (1)
2K2DA:33-79SOLUTION NMR STRUCTURE OF C-TERMINAL DOMAIN OF HUMAN PIRH2. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) TARGET HT2C
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Methanothermobacter thermautotrophicus. Organism_taxid: 145262. (1)
1LTLA:124-172; B:124-172; C:124-172; D:124-172; E:124-172; F:124-172THE DODECAMER STRUCTURE OF MCM FROM ARCHAEAL M. THERMOAUTOTROPHICUM
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Mycobacterium tuberculosis. Organism_taxid: 1773. Strain: h37rv. (1)
2KN9A:18-81SOLUTION STRUCTURE OF ZINC-SUBSTITUTED RUBREDOXIN B (RV3250C) FROM MYCOBACTERIUM TUBERCULOSIS. SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE TARGET MYTUD.01635.A
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Pseudomonas aeruginosa. Organism_taxid: 208964. Strain: pao1. (1)
2V3BB:1-53CRYSTAL STRUCTURE OF THE ELECTRON TRANSFER COMPLEX RUBREDOXIN - RUBREDOXIN REDUCTASE FROM PSEUDOMONAS AERUGINOSA.
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Pseudomonas oleovorans. Organism_taxid: 301. (1)
1S24A:1-56RUBREDOXIN DOMAIN II FROM PSEUDOMONAS OLEOVORANS
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Pyrococcus abyssi. Organism_taxid: 29292. (2)
1YK4A:2-53ULTRA-HIGH RESOLUTION STRUCTURE OF PYROCOCCUS ABYSSI RUBREDOXIN W4L/R5S
1YK5C:2-53; A:1-53; B:1-53; D:1-53PYROCOCCUS ABYSSI RUBREDOXIN
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Pyrococcus abyssi. Organism_taxid: 29292. Strain: ge5/orsay. (1)
2PYAA:2-53ULTRA-HIGH RESOLUTION STRUCTURE OF P. ABYSSI RUBREDOXIN W4L/R5S/A44S
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Pyrococcus furiosus. Organism_taxid: 2261 (4)
1BRFA:1-53RUBREDOXIN (WILD TYPE) FROM PYROCOCCUS FURIOSUS
1CAAA:1-53X-RAY CRYSTAL STRUCTURES OF THE OXIDIZED AND REDUCED FORMS OF THE RUBREDOXIN FROM THE MARINE HYPERTHERMOPHILIC ARCHAEBACTERIUM PYROCOCCUS FURIOSUS
1CADA:1-53X-RAY CRYSTAL STRUCTURES OF THE OXIDIZED AND REDUCED FORMS OF THE RUBREDOXIN FROM THE MARINE HYPERTHERMOPHILIC ARCHAEBACTERIUM PYROCOCCUS FURIOSUS
1ZRPA:1-53SOLUTION-STATE STRUCTURE BY NMR OF ZINC-SUBSTITUTED RUBREDOXIN FROM THE MARINE HYPERTHERMOPHILIC ARCHAEBACTERIUM PYROCOCCUS FURIOSUS
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Pyrococcus furiosus. Organism_taxid: 2261. (7)
1RWDA:1-50BACKBONE NMR STRUCTURE OF A MUTANT P. FURIOSUS RUBREDOXIN USING RESIDUAL DIPOLAR COUPLINGS
2PVXA:1-53; F:501-554; G:601-654; H:701-754; B:101-154; C:201-254; D:301-354; E:401-454NMR AND X-RAY ANALYSIS OF STRUCTURAL ADDITIVITY IN METAL BINDING SITE-SWAPPED HYBRIDS OF RUBREDOXIN
3KYUA:0-53X-RAY CRYSTAL STRUCTURE DETERMINATION OF FULLY PERDEUTERATED RUBREDOXIN AT 100K
3KYVA:0-53DENOVO X-RAY CRYSTAL STRUCTURE DETERMINATION OF H-LABELED PERDEUTERATED RUBREDOXIN AT 100K
3KYWA:0-53XRAY CRYSTAL STRUCTURE DETERMINATION OF H-LABELED PERDEUTERATED RUBREDOXIN AT 295K
3KYXA:0-51JOINT XRAY/NEUTRON CRYSTAL STRUCTURE DETERMINATION OF FULLY PERDEUTERATED RUBREDOXIN AT 295K
3KYYA:0-53JOINT XRAY/NEUTRON CRYSTAL STRUCTURE DETERMINATION OF H-LABELED PERDEUTERATED RUBREDOXIN AT 295K
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Pyrococcus furiosus. Organism_taxid: 2261. (7)
1BQ8A:1-54RUBREDOXIN (METHIONINE MUTANT) FROM PYROCOCCUS FURIOSUS
1IU5A:1-51X-RAY CRYSTAL STRUCTURE OF THE RUBREDOXIN MUTANT FROM PYROCOCCUS FURIOSUS
1IU6A:1-52NEUTRON CRYSTAL STRUCTURE OF THE RUBREDOXIN MUTANT FROM PYROCOCCUS FURIOSUS
1NNQA:133-171; B:133-171RUBRERYTHRIN FROM PYROCOCCUS FURIOSUS PFU-1210814
1QCVA:1-53RUBREDOXIN VARIANT (PFRD-XC4) FOLDS WITHOUT IRON
1VCXA:1-53NEUTRON CRYSTAL STRUCTURE OF THE WILD TYPE RUBREDOXIN FROM PYROCOCCUS FURIOSUS AT 1.5A RESOLUTION
2HR5A:133-171; B:133-171PF1283- RUBRERYTHRIN FROM PYROCOCCUS FURIOSUS IRON BOUND FORM
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Pyrococcus furiosus. Organism_taxid: 2261. Variant: fmet. (1)
1BQ9A:2-54RUBREDOXIN (FORMYL METHIONINE MUTANT) FROM PYROCOCCUS FURIOSUS
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Vulgaris str (Desulfovibrio vulgaris subsp) (8)
1B71A:147-191RUBRERYTHRIN
1DVBA:147-191RUBRERYTHRIN
1QYBA:147-191X-RAY CRYSTAL STRUCTURE OF DESULFOVIBRIO VULGARIS RUBRERYTHRIN WITH ZINC SUBSTITUTED INTO THE [FE(SCYS)4] SITE AND ALTERNATIVE DIIRON SITE STRUCTURES
1RB9A:2-52RUBREDOXIN FROM DESULFOVIBRIO VULGARIS REFINED ANISOTROPICALLY AT 0.92 ANGSTROMS RESOLUTION
1RYTA:147-191RUBRERYTHRIN
1YUXA:165-202; B:165-202MIXED VALANT STATE OF NIGERYTHRIN
1YUZA:165-202; B:165-202PARTIALLY REDUCED STATE OF NIGERYTHRIN
1YV1A:165-202; B:165-202FULLY REDUCED STATE OF NIGERYTHRIN (ALL FERROUS)
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Homologous Superfamily: [code=2.20.28.20, no name defined] (11)
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Escherichia coli k-12. Organism_taxid: 83333. Strain: k-12. (4)
3H97A:141-175STRUCTURE OF A MUTANT METHIONYL-TRNA SYNTHETASE WITH MODIFIED SPECIFICITY
3H99A:141-175STRUCTURE OF A MUTANT METHIONYL-TRNA SYNTHETASE WITH MODIFIED SPECIFICITY COMPLEXED WITH METHIONINE
3H9BA:141-175STRUCTURE OF A MUTANT METHIONYL-TRNA SYNTHETASE WITH MODIFIED SPECIFICITY COMPLEXED WITH AZIDONORLEUCINE
3H9CA:141-175STRUCTURE OF METHIONYL-TRNA SYNTHETASE: CRYSTAL FORM 2
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Escherichia coli. Organism_taxid: 562. (6)
1F4LA:141-175CRYSTAL STRUCTURE OF THE E.COLI METHIONYL-TRNA SYNTHETASE COMPLEXED WITH METHIONINE
1P7PA:141-175METHIONYL-TRNA SYNTHETASE FROM ESCHERICHIA COLI COMPLEXED WITH METHIONINE PHOSPHONATE
1PFUA:141-175METHIONYL-TRNA SYNTHETASE FROM ESCHERICHIA COLI COMPLEXED WITH METHIONINE PHOSPHINATE
1PFVA:141-175METHIONYL-TRNA SYNTHETASE FROM ESCHERICHIA COLI COMPLEXED WITH DIFLUOROMETHIONINE
1PFWA:141-175METHIONYL-TRNA SYNTHETASE FROM ESCHERICHIA COLI COMPLEXED WITH TRIFLUOROMETHIONINE
1PFYA:141-175METHIONYL-TRNA SYNTHETASE FROM ESCHERICHIA COLI COMPLEXED WITH METHIONYL SULPHAMOYL ADENOSINE
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Escherichia coli. Organism_taxid: 562. (1)
1QQTA:141-175METHIONYL-TRNA SYNTHETASE FROM ESCHERICHIA COLI
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Homologous Superfamily: degv family protein (2)
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Eubacterium eligens. Organism_taxid: 39485. (1)
3FDJA:23-60THE STRUCTURE OF A DEGV FAMILY PROTEIN FROM EUBACTERIUM ELIGENS.
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Geobacillus stearothermophilus. Organism_taxid: 1422. (1)
1PZXA:28-62; B:28-62HYPOTHETICAL PROTEIN APC36103 FROM BACILLUS STEAROTHERMOPHILUS: A LIPID BINDING PROTEIN
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Homologous Superfamily: Nop10-like SnoRNP (3)
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Methanocaldococcus jannaschii. Organism_taxid: 2190. (1)
2APOB:403-457CRYSTAL STRUCTURE OF THE METHANOCOCCUS JANNASCHII CBF5 NOP10 COMPLEX
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Pyrococcus furiosus. Organism_taxid: 2261. (1)
2EY4F:4-55CRYSTAL STRUCTURE OF A CBF5-NOP10-GAR1 COMPLEX
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Pyrococcus furiosus. Organism_taxid: 2261. (1)
2RFKB:3-55SUBSTRATE RNA POSITIONING IN THE ARCHAEAL H/ACA RIBONUCLEOPROTEIN COMPLEX
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Homologous Superfamily: RNA polymerase ii, chain L (52)
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[unclassified] (14)
1R9TL:25-70RNA POLYMERASE II STRAND SEPARATED ELONGATION COMPLEX, MISMATCHED NUCLEOTIDE
1SFOL:25-70RNA POLYMERASE II STRAND SEPARATED ELONGATION COMPLEX
1Y1WL:25-70COMPLETE RNA POLYMERASE II ELONGATION COMPLEX
2B63L:25-70COMPLETE RNA POLYMERASE II-RNA INHIBITOR COMPLEX
2E2HL:25-70RNA POLYMERASE II ELONGATION COMPLEX AT 5 MM MG2+ WITH GTP
2E2IL:25-70RNA POLYMERASE II ELONGATION COMPLEX IN 5 MM MG+2 WITH 2'-DGTP
2E2JL:25-70RNA POLYMERASE II ELONGATION COMPLEX IN 5 MM MG+2 WITH GMPCPP
2NVQL:25-70RNA POLYMERASE II ELONGATION COMPLEX IN 150 MM MG+2 WITH 2'DUTP
2NVTL:25-70RNA POLYMERASE II ELONGATION COMPLEX IN 150 MM MG+2 WITH GMPCPP
2NVXL:25-70RNA POLYMERASE II ELONGATION COMPLEX IN 5 MM MG+2 WITH 2'-DUTP
2R7ZL:25-70CISPLATIN LESION CONTAINING RNA POLYMERASE II ELONGATION COMPLEX
2R92L:25-70ELONGATION COMPLEX OF RNA POLYMERASE II WITH ARTIFICIAL RDRP SCAFFOLD
2R93L:25-70ELONGATION COMPLEX OF RNA POLYMERASE II WITH A HEPATITIS DELTA VIRUS-DERIVED RNA STEM LOOP
2YU9L:25-70RNA POLYMERASE II ELONGATION COMPLEX IN 150 MM MG+2 WITH UTP
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Baker's yeast (Saccharomyces cerevisiae) (19)
1I3QL:25-70RNA POLYMERASE II CRYSTAL FORM I AT 3.1 A RESOLUTION
1I50L:25-70RNA POLYMERASE II CRYSTAL FORM II AT 2.8 A RESOLUTION
1I6HL:25-70RNA POLYMERASE II ELONGATION COMPLEX
1K83L:26-70CRYSTAL STRUCTURE OF YEAST RNA POLYMERASE II COMPLEXED WITH THE INHIBITOR ALPHA AMANITIN
1TWAL:25-70RNA POLYMERASE II COMPLEXED WITH ATP
1TWCL:25-70RNA POLYMERASE II COMPLEXED WITH GTP
1TWFL:25-70RNA POLYMERASE II COMPLEXED WITH UTP AT 2.3 A RESOLUTION
1TWGL:25-70RNA POLYMERASE II COMPLEXED WITH CTP
1TWHL:25-70RNA POLYMERASE II COMPLEXED WITH 2'DATP
1Y1VL:25-70REFINED RNA POLYMERASE II-TFIIS COMPLEX
2NVYL:25-70RNA POLYMERASE II FORM II IN 150 MM MN+2
3HOUL:25-70; X:25-70COMPLETE RNA POLYMERASE II ELONGATION COMPLEX I WITH A T-U MISMATCH
3HOVL:25-70COMPLETE RNA POLYMERASE II ELONGATION COMPLEX II
3HOWL:27-70COMPLETE RNA POLYMERASE II ELONGATION COMPLEX III WITH A T-U MISMATCH AND A FRAYED RNA 3'-URIDINE
3HOXL:25-70COMPLETE RNA POLYMERASE II ELONGATION COMPLEX V
3HOYL:25-70COMPLETE RNA POLYMERASE II ELONGATION COMPLEX VI
3HOZL:25-70COMPLETE RNA POLYMERASE II ELONGATION COMPLEX IV WITH A T-U MISMATCH AND A FRAYED RNA 3'-GUANINE
3I4ML:24-708-OXOGUANINE CONTAINING RNA POLYMERASE II ELONGATION COMPLEX D
3I4NL:24-708-OXOGUANINE CONTAINING RNA POLYMERASE II ELONGATION COMPLEX E
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Bakers' yeast (Saccharomyces cerevisiae) (5)
2JA5L:25-70CPD LESION CONTAINING RNA POLYMERASE II ELONGATION COMPLEX A
2JA6L:25-70CPD LESION CONTAINING RNA POLYMERASE II ELONGATION COMPLEX B
2JA7L:25-70; X:25-70CPD LESION CONTAINING RNA POLYMERASE II ELONGATION COMPLEX C
2JA8L:25-70CPD LESION CONTAINING RNA POLYMERASE II ELONGATION COMPLEX D
2VUML:25-70ALPHA-AMANITIN INHIBITED COMPLETE RNA POLYMERASE II ELONGATION COMPLEX
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Brewer's yeast,lager beer yeast,yeast (Saccharomyces cerevisiae) (1)
3CQZL:26-70CRYSTAL STRUCTURE OF 10 SUBUNIT RNA POLYMERASE II IN COMPLEX WITH THE INHIBITOR ALPHA-AMANITIN
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Schizosaccharomyces pombe. Organism_taxid: 284812. Strain: 972h-. Schizosaccharomyces pombe. Organism_taxid: 284812. Strain: 972h-. Schizosaccharomyces pombe. Organism_taxid: 284812. Strain: 972h-. Schizosaccharomyces pombe. Organism_taxid: 284812. Strain: 972h-. Schizosaccharomyces pombe. Organism_taxid: 284812. Strain: 972h-. Schizosaccharomycespombe. Organism_taxid: 284812. Strain: 972h-. Schizosaccharomyces pombe. Organism_taxid: 284812. Strain: 972h-. Schizosaccharomyces pombe. Organism_taxid: 284812. Strain: 972h-. Schizosaccharomyces pombe. Organism_taxid: 284812. Strain: 972h-. Schizosaccharomyces pombe. Organism_taxid: 284812. Strain: 972h-. Schizosaccharomyces pombe. Organism_taxid: 284812. Strain: 972h-. (1)
3H0GL:19-63; X:19-63RNA POLYMERASE II FROM SCHIZOSACCHAROMYCES POMBE
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Yeast (Saccharomyces cerevisiae) (12)
1WCML:25-70COMPLETE 12-SUBUNIT RNA POLYMERASE II AT 3.8 ANG
3FKIL:24-7012-SUBUNIT RNA POLYMERASE II REFINED WITH ZN-SAD DATA
3GTGL:25-70BACKTRACKED RNA POLYMERASE II COMPLEX WITH 12MER RNA
3GTJL:25-70BACKTRACKED RNA POLYMERASE II COMPLEX WITH 13MER RNA
3GTKL:25-70BACKTRACKED RNA POLYMERASE II COMPLEX WITH 18MER RNA
3GTLL:25-70BACKTRACKED RNA POLYMERASE II COMPLEX WITH 13MER WITH G<>U MISMATCH
3GTML:25-70CO-COMPLEX OF BACKTRACKED RNA POLYMERASE II WITH TFIIS
3GTOL:25-70BACKTRACKED RNA POLYMERASE II COMPLEX WITH 15MER RNA
3GTPL:25-70BACKTRACKED RNA POLYMERASE II COMPLEX WITH 24MER RNA
3GTQL:25-70BACKTRACKED RNA POLYMERASE II COMPLEX INDUCED BY DAMAGE
3H3VM:25-70YEAST RNAP II CONTAINING POLY(A)-SIGNAL SEQUENCE IN THE ACTIVE SITE
3K7AL:25-70CRYSTAL STRUCTURE OF AN RNA POLYMERASE II-TFIIB COMPLEX