Chain A from PDB Type:PROTEIN Length:239
aligned with O27798_METTH | O27798 from UniProtKB/TrEMBL Length:666
Alignment length:239
14 24 34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234
O27798_METTH 5 VDKSKTLTKFEEFFSLQDYKDRVFEAIEKYPNVRSIEVDYLDLEMFDPDLADLLIEKPDDVIRAAQQAIRNIDRLRKNVDLNIRFSGISNVIPLRELRSKFIGKFVAVDGIVRKTDEIRPRIVKAVFECRGCMRHHAVTQSTNMITEPSLCSECGGRSFRLLQDESEFLDTQTLKLQEPLENLSGGEQPRQITVVLEDDLVDTLTPGDIVRVTGTLRTVRDERTKRFKNFIYGNYTEFL 243
SCOP domains d1ltla_ A: DNA replication initiator (cdc21/cdc54) N-terminal domain SCOP domains
CATH domains 1ltlA01 A:4-93 mini-chromosome maintenance (MCM) complex, chain A, domain 1 1ltlA02 A:94-123,A:173-242 1ltlA03 A:124-172 1ltlA02 A:94-123,A:173-242 Nucleic acid-binding proteins CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhhhhhhhh.hhhhhhhhhhhhhhh....eeeeehhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh...........eeeee......hhhhhhhhhh..eeeeeeeeeee...eeeeeeeeeee.....eeeee...................eee.hhhheeeeeeeeeee.............eeeeeee.hhh.......eeeeeeeeeeee......eeeeeeeee.... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1ltl A 4 VDKSKTLTKFEEFFSLQDYKDRVFEAIEKYPNVRSIEVDYLDLEMFDPDLADLLIEKPDDVIRAAQQAIRNIDRLRKNVDLNIRFSGISNVIPLRELRSKFIGKFVAVDGIVRKTDEIRPRIVKAVFECRGCMRHHAVTQSTNMITEPSLCSECGGRSFRLLQDESEFLDTQTLKLQEPLENLSGGEQPRQITVVLEDDLVDTLTPGDIVRVTGTLRTVRDERTKRFKNFIYGNYTEFL 242
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223 233
Chain B from PDB Type:PROTEIN Length:239
aligned with O27798_METTH | O27798 from UniProtKB/TrEMBL Length:666
Alignment length:239
14 24 34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234
O27798_METTH 5 VDKSKTLTKFEEFFSLQDYKDRVFEAIEKYPNVRSIEVDYLDLEMFDPDLADLLIEKPDDVIRAAQQAIRNIDRLRKNVDLNIRFSGISNVIPLRELRSKFIGKFVAVDGIVRKTDEIRPRIVKAVFECRGCMRHHAVTQSTNMITEPSLCSECGGRSFRLLQDESEFLDTQTLKLQEPLENLSGGEQPRQITVVLEDDLVDTLTPGDIVRVTGTLRTVRDERTKRFKNFIYGNYTEFL 243
SCOP domains d1ltlb_ B: DNA replication initiator (cdc21/cdc54) N-terminal domain SCOP domains
CATH domains 1ltlB01 B:4-93 mini-chromosome maintenance (MCM) complex, chain A, domain 1 1ltlB02 B:94-123,B:173-242 1ltlB03 B:124-172 1ltlB02 B:94-123,B:173-242 Nucleic acid-binding proteins CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhhhhhh.hhhhhhhhhhhhhh.....eeeeehhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhh.........eeeee......hhhhhhhhhh..eeeeeeeeeee...eeeeeeeeeee.....eeeee...................eee.hhhheeeeeeeeeee.............eeeeeee.hhh.......eeeeeeeeeeee......eeeeeeeeeeee. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1ltl B 4 VDKSKTLTKFEEFFSLQDYKDRVFEAIEKYPNVRSIEVDYLDLEMFDPDLADLLIEKPDDVIRAAQQAIRNIDRLRKNVDLNIRFSGISNVIPLRELRSKFIGKFVAVDGIVRKTDEIRPRIVKAVFECRGCMRHHAVTQSTNMITEPSLCSECGGRSFRLLQDESEFLDTQTLKLQEPLENLSGGEQPRQITVVLEDDLVDTLTPGDIVRVTGTLRTVRDERTKRFKNFIYGNYTEFL 242
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223 233
Chain C from PDB Type:PROTEIN Length:239
aligned with O27798_METTH | O27798 from UniProtKB/TrEMBL Length:666
Alignment length:239
14 24 34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234
O27798_METTH 5 VDKSKTLTKFEEFFSLQDYKDRVFEAIEKYPNVRSIEVDYLDLEMFDPDLADLLIEKPDDVIRAAQQAIRNIDRLRKNVDLNIRFSGISNVIPLRELRSKFIGKFVAVDGIVRKTDEIRPRIVKAVFECRGCMRHHAVTQSTNMITEPSLCSECGGRSFRLLQDESEFLDTQTLKLQEPLENLSGGEQPRQITVVLEDDLVDTLTPGDIVRVTGTLRTVRDERTKRFKNFIYGNYTEFL 243
SCOP domains d1ltlc_ C: DNA replication initiator (cdc21/cdc54) N-terminal domain SCOP domains
CATH domains 1ltlC01 C:4-93 mini-chromosome maintenance (MCM) complex, chain A, domain 1 1ltlC02 C:94-123,C:173-242 1ltlC03 C:124-172 1ltlC02 C:94-123,C:173-242 Nucleic acid-binding proteins CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhhhhhhhh.hhhhhhhhhhhhhh........eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh............ee......hhhhhhhhhh..eeeeeee.......eeeeeeeeeee.....eeeee...................eee.hhhheeeeeeeeee...............eeeeee.hhh.......eeeeeeeeeeee......eeeeeeeee.... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1ltl C 4 VDKSKTLTKFEEFFSLQDYKDRVFEAIEKYPNVRSIEVDYLDLEMFDPDLADLLIEKPDDVIRAAQQAIRNIDRLRKNVDLNIRFSGISNVIPLRELRSKFIGKFVAVDGIVRKTDEIRPRIVKAVFECRGCMRHHAVTQSTNMITEPSLCSECGGRSFRLLQDESEFLDTQTLKLQEPLENLSGGEQPRQITVVLEDDLVDTLTPGDIVRVTGTLRTVRDERTKRFKNFIYGNYTEFL 242
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223 233
Chain D from PDB Type:PROTEIN Length:239
aligned with O27798_METTH | O27798 from UniProtKB/TrEMBL Length:666
Alignment length:239
14 24 34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234
O27798_METTH 5 VDKSKTLTKFEEFFSLQDYKDRVFEAIEKYPNVRSIEVDYLDLEMFDPDLADLLIEKPDDVIRAAQQAIRNIDRLRKNVDLNIRFSGISNVIPLRELRSKFIGKFVAVDGIVRKTDEIRPRIVKAVFECRGCMRHHAVTQSTNMITEPSLCSECGGRSFRLLQDESEFLDTQTLKLQEPLENLSGGEQPRQITVVLEDDLVDTLTPGDIVRVTGTLRTVRDERTKRFKNFIYGNYTEFL 243
SCOP domains d1ltld_ D: DNA replication initiator (cdc21/cdc54) N-terminal domain SCOP domains
CATH domains 1ltlD01 D:4-93 mini-chromosome maintenance (MCM) complex, chain A, domain 1 1ltlD02 D:94-123,D:173-242 1ltlD03 D:124-172 1ltlD02 D:94-123,D:173-242 Nucleic acid-binding proteins CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhhhhhhhh....hhhhhhhhhhh.....ee..hhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh........ee.........hhhhh.......eeeeeeeeeeeeeeeeeeeeeeeee.....eeeee...................eee.hhhheeeeeeeeeee.............eeeeeee.hhh........eeeeeeeeeee......eeeeeeeeee... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1ltl D 4 VDKSKTLTKFEEFFSLQDYKDRVFEAIEKYPNVRSIEVDYLDLEMFDPDLADLLIEKPDDVIRAAQQAIRNIDRLRKNVDLNIRFSGISNVIPLRELRSKFIGKFVAVDGIVRKTDEIRPRIVKAVFECRGCMRHHAVTQSTNMITEPSLCSECGGRSFRLLQDESEFLDTQTLKLQEPLENLSGGEQPRQITVVLEDDLVDTLTPGDIVRVTGTLRTVRDERTKRFKNFIYGNYTEFL 242
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223 233
Chain E from PDB Type:PROTEIN Length:242
aligned with O27798_METTH | O27798 from UniProtKB/TrEMBL Length:666
Alignment length:242
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241
O27798_METTH 2 MKTVDKSKTLTKFEEFFSLQDYKDRVFEAIEKYPNVRSIEVDYLDLEMFDPDLADLLIEKPDDVIRAAQQAIRNIDRLRKNVDLNIRFSGISNVIPLRELRSKFIGKFVAVDGIVRKTDEIRPRIVKAVFECRGCMRHHAVTQSTNMITEPSLCSECGGRSFRLLQDESEFLDTQTLKLQEPLENLSGGEQPRQITVVLEDDLVDTLTPGDIVRVTGTLRTVRDERTKRFKNFIYGNYTEFL 243
SCOP domains d1ltle_ E: DNA replication initiator (cdc21/cdc54) N-terminal domain SCOP domains
CATH domains ---1ltlE01 E:4-93 mini-chromosome maintenance (MCM) complex, chain A, domain 1 1ltlE02 E:94-123,E:173-242 1ltlE03 E:124-172 1ltlE02 E:94-123,E:173-242 Nucleic acid-binding proteins CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhhhhh.hhhhhhhhhhhhhhh....eeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........eeeee......hhhhhhhhhh..eeeeeeeeeee...eeeeeeeeeee.....eeeee...................eee.hhhheeeeeeeeeee.............eeeeeee.hhh.......eeeeeeeeeeee......eeeeeeeee.... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1ltl E 1 MKTVDKSKTLTKFEEFFSLQDYKDRVFEAIEKYPNVRSIEVDYLDLEMFDPDLADLLIEKPDDVIRAAQQAIRNIDRLRKNVDLNIRFSGISNVIPLRELRSKFIGKFVAVDGIVRKTDEIRPRIVKAVFECRGCMRHHAVTQSTNMITEPSLCSECGGRSFRLLQDESEFLDTQTLKLQEPLENLSGGEQPRQITVVLEDDLVDTLTPGDIVRVTGTLRTVRDERTKRFKNFIYGNYTEFL 242
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240
Chain F from PDB Type:PROTEIN Length:239
aligned with O27798_METTH | O27798 from UniProtKB/TrEMBL Length:666
Alignment length:239
14 24 34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234
O27798_METTH 5 VDKSKTLTKFEEFFSLQDYKDRVFEAIEKYPNVRSIEVDYLDLEMFDPDLADLLIEKPDDVIRAAQQAIRNIDRLRKNVDLNIRFSGISNVIPLRELRSKFIGKFVAVDGIVRKTDEIRPRIVKAVFECRGCMRHHAVTQSTNMITEPSLCSECGGRSFRLLQDESEFLDTQTLKLQEPLENLSGGEQPRQITVVLEDDLVDTLTPGDIVRVTGTLRTVRDERTKRFKNFIYGNYTEFL 243
SCOP domains d1ltlf_ F: DNA replication initiator (cdc21/cdc54) N-terminal domain SCOP domains
CATH domains 1ltlF01 F:4-93 mini-chromosome maintenance (MCM) complex, chain A, domain 1 1ltlF02 F:94-123,F:173-242 1ltlF03 F:124-172 1ltlF02 F:94-123,F:173-242 Nucleic acid-binding proteins CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhh.....hhhhhhhhhhh....eeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........eeeee......hhhhhhhhhh..eeeeeeeeeee...eeeeeeeeeee.....eeeee...................eee.hhhheeeeeeeeeee.............eeeeeee.hhh.......eeeeeeeeeeee......eeeeeeeee.... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1ltl F 4 VDKSKTLTKFEEFFSLQDYKDRVFEAIEKYPNVRSIEVDYLDLEMFDPDLADLLIEKPDDVIRAAQQAIRNIDRLRKNVDLNIRFSGISNVIPLRELRSKFIGKFVAVDGIVRKTDEIRPRIVKAVFECRGCMRHHAVTQSTNMITEPSLCSECGGRSFRLLQDESEFLDTQTLKLQEPLENLSGGEQPRQITVVLEDDLVDTLTPGDIVRVTGTLRTVRDERTKRFKNFIYGNYTEFL 242
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223 233
Legend: |
|
→ Mismatch |
(orange background) |
|
- |
→ Gap |
(green background, '-', border residues have a numbering label) |
|
|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
|
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
|
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |